# terms

id: PBO:0059618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 30","termid":"PBO:0059618"}


id: GO:0051509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + tomatidine = UDP + O-glucosyl-tomatidine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tomatidine UDP-glucosyltransferase activity (obsolete GO:0051509)","termid":"GO:0051509"}


id: PBO:0085329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol synthase; required for biosynthesis of phosphatidylinositol, which is a precursor for polyphosphoinositides, sphingolipids, and glycolipid anchors for some of the plasma membrane proteins","termid":"PBO:0085329"}


id: PR:O74173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor 1-beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04800","PANTHER:PTHR11595:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.04","secondary_identifiers":["UniProtKB:O74173"],"synonyms":[{"name":"EF-1-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EEF1B2","type":"exact"}],"termid":"PR:O74173"}


id: PBO:0005227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex SMC subunit Smc6","termid":"PBO:0005227"}


id: GO:0000310
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93525],"is_not":false,"summary":null,"term":"GO:0000310"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + XMP = 5-phospho-alpha-D-ribose 1-diphosphate + xanthine.","definition_xrefs":["RHEA:10800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine phosphoribosyltransferase activity","termid":"GO:0106130"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"xanthine phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.2.22","MetaCyc:XANPRIBOSYLTRAN-RXN","GO:0009043"],"synonyms":[{"name":"5-phospho-alpha-D-ribose-1-diphosphate:xanthine phospho-D-ribosyltransferase activity","type":"related"},{"name":"XMP pyrophosphorylase activity","type":"related"},{"name":"XMP:diphosphate 5-phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"Xan phosphoribosyltransferase activity","type":"related"},{"name":"xanthine-guanine phosphoribosyltransferase activity","type":"exact"},{"name":"xanthosine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"xanthylate pyrophosphorylase activity","type":"related"},{"name":"xanthylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0000310","terms_by_termid":{"GO:0000310":null}}


id: PBO:0116695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCAM1 antisense RNA 1","termid":"PBO:0116695"}


id: MONDO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute kidney injury associated with microangiopathic hemolytic anemia and thrombocytopenia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare constitutional hemolytic anemia (obsolete MONDO:0015910)","termid":"MONDO:0015910"},{"relation_name":"excluded_subClassOf","term_name":"thrombotic microangiopathy","termid":"MONDO:0019737"},{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemolytic-uremic syndrome","secondary_identifiers":["MEDGEN:42403","MESH:D006463","NCIT:C75545","Orphanet:544458","SCTID:111407006","UMLS:C0019061","GARD:22233","DOID:12554","ICD10CM:D59.3","ICD9:283.11"],"synonyms":[{"name":"HUS","type":"exact"},{"name":"acute renal failure, thrombocytopenia, and microangiopathic hemolytic anaemia associated with distorted erythrocytes ('burr cells')","type":"related"},{"name":"acute renal failure, thrombocytopenia, and microangiopathic hemolytic anemia associated with distorted erythrocytes ('burr cells')","type":"related"},{"name":"haemolytic-uraemic syndrome","type":"exact"},{"name":"hemolytic uremic syndrome","type":"exact"}],"termid":"MONDO:0001549","xrefs":{"Monarch":{"xref_id":"0001549"}}}


id: PBO:0042207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin I family member 2","termid":"PBO:0042207"}


id: GO:1903655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 2 residues that is involved in positive regulation of transcription elongation from RNA polymerase II promoter.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:19328067"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 2 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter (obsolete GO:1903655)","termid":"GO:1903655"}


id: PBO:0038768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 6","termid":"PBO:0038768"}


id: FYPO:0005242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002060","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on glutamine nitrogen source","synonyms":[{"name":"decreased growth on glutamine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on glutamine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with glutamine nitrogen source","type":"narrow"},{"name":"reduced cell growth on glutamine nitrogen source","type":"exact"},{"name":"slow cell growth on glutamine nitrogen source","type":"narrow"}],"termid":"FYPO:0005242"}


id: PBO:0018158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transmembrane transporter Gms1","termid":"PBO:0018158"}


id: PBO:0026836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_poly(A)_polymerase_activity","termid":"PBO:0026836"}


id: GO:1900838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ergot alkaloid biosynthetic process","termid":"GO:1900823"},{"relation_name":"is_a","term_name":"regulation of fumigaclavine C biosynthetic process","termid":"GO:1900837"},{"relation_name":"negatively_regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"inhibition of fumigaclavine C biosynthetic process","type":"narrow"}],"termid":"GO:1900838"}


id: PBO:0060183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 3B, cell surface associated","termid":"PBO:0060183"}


id: PBO:0071108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 110","termid":"PBO:0071108"}


id: PBO:0045410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 12","termid":"PBO:0045410"}


id: MONDO:0100095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive neurodegenerative disorder with onset in the first years of life following normal early development, with cyclic episodic deterioration in response to stress, such as infection or febrile illness. The severity is highly variable. The cause is mutations in the ADPRHL2 gene.","definition_xrefs":["PMID:3010008","PMID:30401461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration, childhood-onset, stress-induced, with variable ataxia and seizures","secondary_identifiers":["MEDGEN:1648391","OMIM:618170","DOID:0070352","UMLS:C4748527"],"synonyms":[{"name":"CONDSIAS","type":"exact"},{"name":"neurodegeneration, childhood-onset, stress-induced, with variable ataxia and seizures","type":"exact"}],"termid":"MONDO:0100095","xrefs":{"Monarch":{"xref_id":"0100095"}}}


id: SO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"RNA secondary structure that affects the stability of an RNA molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001957 RNA_stability_element (obsolete SO:0001957)","synonyms":[{"name":"rna stability element","type":"related"}],"termid":"SO:0001957"}


id: PBO:0053694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 892","termid":"PBO:0053694"}


id: PBO:0036320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Pan3 (predicted)","termid":"PBO:0036320"}


id: PBO:0003181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horsetail movement protein Hrs1/Mcp6","termid":"PBO:0003181"}


id: MONDO:0015543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemophagocytic syndrome associated with an infection (obsolete MONDO:0015543)","termid":"MONDO:0015543","xrefs":{"Monarch":{"xref_id":"0015543"}}}


id: PBO:0080714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing, antisense to TP73","termid":"PBO:0080714"}


id: MONDO:0859192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"famililal cerebral cavernous malformations","termid":"MONDO:0031037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cerebral cavernous malformation 4","secondary_identifiers":["MEDGEN:1794201","OMIM:619538","UMLS:C5561991"],"synonyms":[{"name":"cerebral cavernous malformations 4","type":"exact"}],"termid":"MONDO:0859192","xrefs":{"Monarch":{"xref_id":"0859192"}}}


id: PBO:0001670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine 5'-triphosphate nucleotidohydrolase (predicted)","termid":"PBO:0001670"}


id: PBO:0089902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily","termid":"PBO:0089902"}


id: GO:0033523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by addition of ubiquitin groups.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B ubiquitination (obsolete GO:0033523)","termid":"GO:0033523"}


id: GO:0050581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mannitol + O2 = mannose + H2O2.","definition_xrefs":["MetaCyc:1.1.3.40-RXN","EC:1.1.3.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-mannitol oxidase activity","secondary_identifiers":["RHEA:18513"],"synonyms":[{"name":"D-arabinitol oxidase activity","type":"related"},{"name":"D-arabitol oxidase activity","type":"related"},{"name":"mannitol oxidase activity","type":"related"},{"name":"mannitol:oxygen oxidoreductase (cyclizing)","type":"related"}],"termid":"GO:0050581"}


id: PBO:0058122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4424","termid":"PBO:0058122"}


id: PBO:0087568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes; involved in RNA polymerase II transcription initiation and in chromatin modification; contains a YEATS domain","termid":"PBO:0087568"}


id: GO:0035487
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97937],"is_not":false,"summary":null,"term":"GO:0035487"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a T/T mispair.","definition_xrefs":["GOC:jh","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"thymine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"T/T mispair binding","type":"exact"}],"termid":"GO:0035487","terms_by_termid":{"GO:0035487":null}}


id: GO:0018903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving members of the 1,3-dichloropropene family, which includes cis- and trans-1,3-dichloropropene. The 1,3-dichloropropenes are chlorinated hydrocarbons and the major active ingredients of commercial products for control of plant-parasitic nematodes.","definition_xrefs":["UM-BBD_pathwayID:cpr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,3-dichloropropene metabolic process","synonyms":[{"name":"1,3-dichloropropene metabolism","type":"exact"},{"name":"1,3-dichloropropylene metabolic process","type":"exact"},{"name":"1,3-dichloropropylene metabolism","type":"exact"},{"name":"gamma-chloroallylchloride metabolic process","type":"exact"},{"name":"gamma-chloroallylchloride metabolism","type":"exact"}],"termid":"GO:0018903"}


id: GO:0031599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The regulatory subcomplex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle (obsolete GO:0031599)","termid":"GO:0031599"}


id: PBO:0035885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-asymmetric_mitochondrial_aggregation","termid":"PBO:0035885"}


id: PBO:0005147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-nucleosidyl)-tetraphosphatase","termid":"PBO:0005147"}


id: GO:1900266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of substance P receptor binding.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of substance P receptor binding (obsolete GO:1900266)","synonyms":[{"name":"down regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"down regulation of substance P receptor binding","type":"exact"},{"name":"down regulation of substance P receptor ligand","type":"narrow"},{"name":"down-regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"down-regulation of substance P receptor binding","type":"exact"},{"name":"down-regulation of substance P receptor ligand","type":"narrow"},{"name":"downregulation of neurokinin-1 receptor binding","type":"exact"},{"name":"downregulation of substance P receptor binding","type":"exact"},{"name":"downregulation of substance P receptor ligand","type":"narrow"},{"name":"inhibition of neurokinin-1 receptor binding","type":"exact"},{"name":"inhibition of substance P receptor binding","type":"narrow"},{"name":"inhibition of substance P receptor ligand","type":"narrow"},{"name":"negative regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"negative regulation of substance P receptor ligand","type":"narrow"}],"termid":"GO:1900266"}


id: PBO:0031685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_peroxisome_degradation","termid":"PBO:0031685"}


id: PBO:0017090
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COX18","termid":"PBO:0017090"}


id: MONDO:0011943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus with nephritis, susceptibility to, 2","secondary_identifiers":["MEDGEN:375006","OMIM:607966","UMLS:C1842756"],"synonyms":[{"name":"SLEN2","type":"exact"},{"name":"systemic lupus erythematosus with nephritis, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0011943","xrefs":{"Monarch":{"xref_id":"0011943"}}}


id: GO:1905895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to tunicamycin.","definition_xrefs":["PMID:21803450","GOC:bc","GOC:aruk","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to tunicamycin (obsolete GO:1905895)","synonyms":[{"name":"down regulation of cellular response to tunicamycin","type":"exact"},{"name":"down-regulation of cellular response to tunicamycin","type":"exact"},{"name":"downregulation of cellular response to tunicamycin","type":"exact"},{"name":"inhibition of cellular response to tunicamycin","type":"narrow"}],"termid":"GO:1905895"}


id: GO:1901769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carbapenem.","definition_xrefs":["GOC:yaf","UniPathway:UPA00182","PMID:9402024","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic biosynthetic process","termid":"GO:0030654"},{"relation_name":"is_a","term_name":"carbapenem metabolic process","termid":"GO:1901767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"carbapenem biosynthetic process","synonyms":[{"name":"carbapenem anabolism","type":"exact"},{"name":"carbapenem biosynthesis","type":"exact"},{"name":"carbapenem formation","type":"exact"},{"name":"carbapenem synthesis","type":"exact"}],"termid":"GO:1901769"}


id: PBO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal could be generated by overlap of UTRs","termid":"PBO:0000150"}


id: PBO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.10","termid":"PBO:0001840"}


id: MONDO:0006483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic finding indicating the presence of dysplastic changes in the transitional cell epithelium of the urinary tract.","definition_xrefs":["NCIT:C39856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urothelial neoplasm","termid":"MONDO:0024337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urothelial dysplasia","secondary_identifiers":["EFO:1000611","MEDGEN:266165","UMLS:C1275859"],"synonyms":[{"name":"transitional cell dysplasia of the urinary tract","type":"exact"},{"name":"urothelial dysplasia","type":"exact"}],"termid":"MONDO:0006483","xrefs":{"Monarch":{"xref_id":"0006483"}}}


id: PBO:0028829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_localization","termid":"PBO:0028829"}


id: PBO:0055851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 1B","termid":"PBO:0055851"}


id: PBO:0041016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 3","termid":"PBO:0041016"}


id: PBO:0042213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L1","termid":"PBO:0042213"}


id: PBO:0029297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_S-adenosyl-L-methionine_level_during_G0","termid":"PBO:0029297"}


id: PBO:0003744
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VII Cox7 (predicted)","termid":"PBO:0003744"}


id: MONDO:1011641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and woolly haircoat syndrome, non-human animal","secondary_identifiers":["OMIA:000161"],"termid":"MONDO:1011641","xrefs":{"Monarch":{"xref_id":"1011641"}}}


id: MONDO:0007745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive inherited disorder characterized by unconjugated hyperbilirubinemia, resulting in harmless intermittent jaundice.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary hyperbilirubinemia","termid":"MONDO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Gilbert syndrome","secondary_identifiers":["SCTID:27503000","UMLS:C0017551","DOID:2739","icd11.foundation:1947520963","Orphanet:357","EFO:0005556","MEDGEN:4891","NCIT:C84729","ICD10CM:E80.4","MESH:D005878","OMIM:143500"],"synonyms":[{"name":"Gilbert disease","type":"exact"},{"name":"Gilbert syndrome","type":"exact"},{"name":"Gilbert's disease","type":"exact"},{"name":"Gilbert's syndrome","type":"exact"},{"name":"Gilbert-Meulengracht syndrome","type":"exact"},{"name":"constitutional hyperbilirubinemia","type":"exact"},{"name":"familial cholemia","type":"exact"},{"name":"hereditary nonhemolytic jaundice","type":"exact"},{"name":"hyperbilirubinemia 1","type":"related"},{"name":"hyperbilirubinemia type 1","type":"exact"},{"name":"hyperbilirubinemia, Arias type","type":"related"},{"name":"hyperbilirubinemia, Gilbert type","type":"related"}],"termid":"MONDO:0007745","xrefs":{"Monarch":{"xref_id":"0007745"}}}


id: PBO:0056161
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macroH2A.2 histone","termid":"PBO:0056161"}


id: GO:0071426
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonucleoprotein complex export from nucleus (obsolete GO:0071426)","synonyms":[{"name":"RNP export from nucleus","type":"exact"},{"name":"ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"ribonucleoprotein complex nucleus export","type":"exact"},{"name":"ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071426"}


id: MONDO:0010288
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adrenomyodystrophy is an extremely rare genetic endocrine disease characterized by primary adrenal insufficiency, dystrophic myopathy, hepatic steatosis, severe psychomotor delay, megalocornea, failure to thrive, chronic constipation, and terminal bladder ectasia which can lead to death. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:977"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomyodystrophy","secondary_identifiers":["UMLS:C1846044","MEDGEN:337494","GARD:562","icd11.foundation:46666832","MESH:C538051","OMIM:300270","SCTID:763311001"],"synonyms":[{"name":"adrenomyodystrophy","type":"exact"}],"termid":"MONDO:0010288","xrefs":{"Monarch":{"xref_id":"0010288"}}}


id: FYPO:0008252
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from long terminal repeat elements (LTRs) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal LTR-derived RNA level","termid":"FYPO:0008252"}


id: FYPO:0001797
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation is abnormal. Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["GO:0006412","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abnormal translation","synonyms":[{"name":"abnormal protein biosynthesis","type":"exact"},{"name":"abnormal protein synthesis","type":"exact"},{"name":"abnormal translation during mitotic cell cycle","type":"related"},{"name":"abnormal translation during vegetative growth","type":"exact"}],"termid":"FYPO:0001797"}


id: MONDO:0020714
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  {"annotated_genes":["SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85463],"is_not":false,"summary":null,"term":"MONDO:0020714"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial myopathy, episodic, with optic atrophy and reversible leukoencephalopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:251900","MEDGEN:1679560","UMLS:C5193223"],"termid":"MONDO:0020714","terms_by_termid":{"MONDO:0020714":null},"xrefs":{"Monarch":{"xref_id":"0020714"}}}


id: GO:0090068
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id: GO:0051433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH2 protein domain, present in Bcl-2 family members. Proteins that act as inhibitors of apoptosis harbour at least three BH domains: BH1, BH2 and BH3; the BH1 and BH2 domains are found in all death antagonists of the Bcl-2 family but only in one class of death agonists.","definition_xrefs":["PMID:9704409","PMID:12133724","Prosite:PS01258","PMID:9020082","PMID:11048732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"BH2 domain binding","termid":"GO:0051433"}


id: PBO:0002912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Map1","termid":"PBO:0002912"}


id: MONDO:1011157
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis, non-human animal","termid":"MONDO:1010297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, domestic guinea pig","secondary_identifiers":["OMIA:000747-10141"],"termid":"MONDO:1011157","xrefs":{"Monarch":{"xref_id":"1011157"}}}


id: PBO:0047792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box F1","termid":"PBO:0047792"}


id: MONDO:0014193
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the ARMC4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 23","secondary_identifiers":["DOID:0110609","UMLS:C3809548","GARD:15969","MEDGEN:815878","OMIM:615451"],"synonyms":[{"name":"ARMC4 primary ciliary dyskinesia","type":"exact"},{"name":"CILD23","type":"exact"},{"name":"ciliary dyskinesia, primary, 23","type":"related"},{"name":"ciliary dyskinesia, primary, 23, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 23","type":"exact"},{"name":"primary ciliary dyskinesia 23 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in ARMC4","type":"exact"},{"name":"primary ciliary dyskinesia type 23","type":"exact"}],"termid":"MONDO:0014193","xrefs":{"Monarch":{"xref_id":"0014193"}}}


id: MONDO:0010981
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tibia absent - polydactyly - arachnoid cyst syndrome is a very rare constellation of multiple anomalies, including absence or hypoplasia of the tibia.","definition_xrefs":["Orphanet:3328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"absent tibia-polydactyly-arachnoid cyst syndrome","secondary_identifiers":["SCTID:733068001","UMLS:C1832859","MEDGEN:318725","GARD:5210","MESH:C563403","OMIM:601027"],"synonyms":[{"name":"Holmes Collins syndrome","type":"related"},{"name":"Holmes-Collins syndrome","type":"exact"},{"name":"absence/hypoplasia of tibia, polydactyly, retrocerebellar arachnoid cyst, and other anomalies","type":"related"},{"name":"tibia absent polydactyly arachnoid cyst","type":"related"},{"name":"tibia, absence or hypoplasia of, with polydactyly, RETROCEREBELLAR arachnoid cyst, and other anomalies","type":"related"},{"name":"tibia, absence or hypoplasia of, with polydactyly, retrocerebellar arachnoid cyst, and other anomalies","type":"related"}],"termid":"MONDO:0010981","xrefs":{"Monarch":{"xref_id":"0010981"}}}


id: PBO:0011079
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  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ABD1","termid":"PBO:0011079"}


id: PBO:0069878
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1165, pseudogene","termid":"PBO:0069878"}


id: GO:0021811
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id: PBO:0062894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacid CoA-transferase 1","termid":"PBO:0062894"}


id: PBO:0053142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6D, pseudogene","termid":"PBO:0053142"}


id: GO:0004693
data:
  {"annotated_genes":["SJAG_03967","SJAG_03421","SJAG_01000","SJAG_03048","SJAG_00150","SJAG_00342","SJAG_03061","SJAG_01825"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58340,59039,71245,76120,78179,79305,79311,79922],"is_not":false,"summary":null,"term":"GO:0004693"}]},"cv_name":"molecular_function","definition":"Cyclin-dependent catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["GOC:rn","GOC:pr","PMID:9841670","PMID:7877684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase activity","termid":"GO:0097472"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01000":null,"SJAG_01825":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0016301","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-187948","Reactome:R-HSA-2172183","Reactome:R-HSA-9008412","Reactome:R-HSA-9624800","Reactome:R-HSA-69754","Reactome:R-HSA-9686521","Reactome:R-HSA-2294600","Reactome:R-HSA-174132","Reactome:R-HSA-1226094","Reactome:R-HSA-1226095","Reactome:R-HSA-180047","Reactome:R-HSA-2468293","Reactome:R-HSA-2990882","EC:2.7.11.22","Reactome:R-HSA-3788705","Reactome:R-HSA-4088024","Reactome:R-HSA-69756","GO:0016537","Reactome:R-HSA-9009282","Reactome:R-HSA-2468287","Reactome:R-HSA-187520","Reactome:R-HSA-174251","Reactome:R-HSA-2514854","Reactome:R-HSA-69227","Reactome:R-HSA-187916","Reactome:R-HSA-2245218","Reactome:R-HSA-2220971","Reactome:R-HSA-2984220","Reactome:R-HSA-4086410","Reactome:R-HSA-5195402","Reactome:R-HSA-174122","Reactome:R-HSA-5244669","Reactome:R-HSA-6805109","Reactome:R-HSA-5692755","Reactome:R-HSA-380278","Reactome:R-HSA-69005","Reactome:R-HSA-1912391","Reactome:R-HSA-187959","Reactome:R-HSA-174079","Reactome:R-HSA-2430533","Reactome:R-HSA-188390","Reactome:R-HSA-6797606","Reactome:R-HSA-6793661","Reactome:R-HSA-68944"],"synonyms":[{"name":"ATP:cyclin phosphotransferase activity","type":"related"},{"name":"CDK","type":"related"},{"name":"CDK activity","type":"exact"},{"name":"CDK, catalytic subunit activity","type":"exact"},{"name":"Cdk-activating protein kinase activity","type":"related"},{"name":"D-type cyclin kinase activity","type":"narrow"},{"name":"cdc2 kinase activity","type":"narrow"},{"name":"cdk-activating kinase activity","type":"related"},{"name":"cyclin D-cdk6 kinase activity","type":"narrow"},{"name":"cyclin D-dependent kinase activity","type":"narrow"},{"name":"cyclin E kinase activity","type":"narrow"},{"name":"cyclin-A associated kinase activity","type":"narrow"},{"name":"cyclin-dependent kinase 6 activity","type":"narrow"},{"name":"cyclin-dependent kinase activity","type":"broad"},{"name":"cyclin-dependent kinase-2 activity","type":"narrow"},{"name":"cyclin-dependent kinase-4 activity","type":"narrow"},{"name":"cyclin-dependent protein kinase activity","type":"broad"},{"name":"cyclin-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"neuronal cdc2-like kinase activity","type":"narrow"}],"termid":"GO:0004693","terms_by_termid":{"GO:0004693":null}}


id: PBO:0044359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 46","termid":"PBO:0044359"}


id: PBO:0059633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule crosslinking factor 1","termid":"PBO:0059633"}


id: GO:0033510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving luteolin, 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"luteolin metabolic process","synonyms":[{"name":"luteolin metabolism","type":"exact"}],"termid":"GO:0033510"}


id: MONDO:0016923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 3 disorder","termid":"MONDO:0700010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 3","secondary_identifiers":["GARD:20844","UMLS:C4518491","MEDGEN:1372547","Orphanet:262201","SCTID:726341009"],"synonyms":[{"name":"partial duplication of chromosome type 3","type":"exact"},{"name":"partial trisomy of chromosome 3","type":"exact"}],"termid":"MONDO:0016923","xrefs":{"Monarch":{"xref_id":"0016923"}}}


id: PBO:0067437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 558, pseudogene","termid":"PBO:0067437"}


id: MONDO:1011932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent inflammatory pulmonary disease, non-human animal","secondary_identifiers":["OMIA:002205"],"termid":"MONDO:1011932","xrefs":{"Monarch":{"xref_id":"1011932"}}}


id: PBO:0012551
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae TEM1","termid":"PBO:0012551"}


id: GO:0022894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 20 to 85 picoSiemens that opens in response to stimulus by internal calcium ions. Intermediate conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:mtg_transport","OMIM:602754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"intermediate conductance calcium-activated potassium channel activity","synonyms":[{"name":"IK KCa channels","type":"exact"},{"name":"IK calcium-activated potassium channel activity","type":"exact"},{"name":"intermediate conductance KCa channels","type":"exact"}],"termid":"GO:0022894"}


id: MONDO:0021339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the hard palate.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hard palate cancer","termid":"MONDO:0004719"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of hard palate","secondary_identifiers":["MEDGEN:138019","NCIT:C8394","SCTID:254434008","UMLS:C0345550"],"synonyms":[{"name":"carcinoma of hard palate","type":"exact"},{"name":"carcinoma of the hard palate","type":"exact"},{"name":"hard palate carcinoma","type":"exact"}],"termid":"MONDO:0021339","xrefs":{"Monarch":{"xref_id":"0021339"}}}


id: MONDO:0009271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Geroderma osteodysplastica (GO) is characterized by lax and wrinkled skin (especially on the dorsum of the hands and feet and abdomen), progeroid features, hip dislocation, joint laxity, severe short stature/dwarfism, severe osteoporosis, vertebral abnormalities and spontaneous fractures, and developmental delay and mild intellectual deficit.","definition_xrefs":["Orphanet:2078"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005497"],"is_obsolete":false,"name":"geroderma osteodysplastica","secondary_identifiers":["MESH:C537799","DOID:0111266","ICD9:759.89","GARD:413","SCTID:254116003","UMLS:C0432255","OMIM:231070","MEDGEN:98149"],"synonyms":[{"name":"GERODERMA OSTEODYSPLASTICUM","type":"related"},{"name":"GO","type":"related"},{"name":"Geroderma osteodysplasticum","type":"related"},{"name":"Gerodermia osteodysplastica","type":"related"},{"name":"Walt Disney dwarfism","type":"related"},{"name":"geroderma osteodysplastica","type":"exact"}],"termid":"MONDO:0009271","xrefs":{"Monarch":{"xref_id":"0009271"}}}


id: MOD:00997
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclohexyl ester","synonyms":[{"name":"OcHex","type":"exact"}],"termid":"MOD:00997"}


id: MONDO:0009936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary pulmonary hypoplasia is a rare, isolated, genetic developmental defect during embryogenesis characterized by congential malformation of pulmonary parenchyma with absence of other anomalies. Neonatally patients present with decreased breath sounds, small lung volume and severe respiratory distress that is not responsive to aggressive treatment (including surfactant instillation/ mechanical respiratory support). It is usually not compatible with life.","definition_xrefs":["Orphanet:2257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial primary pulmonary hypoplasia","secondary_identifiers":["MEDGEN:141589","ICD9:748.5","UMLS:C0456891","OMIM:265430","GARD:16591","icd11.foundation:1778475393","SCTID:277656005"],"synonyms":[{"name":"lung agenesis","type":"related"},{"name":"primary pulmonary hypoplasia","type":"related"},{"name":"pulmonary hypoplasia, primary","type":"related"}],"termid":"MONDO:0009936","xrefs":{"Monarch":{"xref_id":"0009936"}}}


id: PBO:0090022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unknown protein, may bind replication origins Abp2","termid":"PBO:0090022"}


id: PR:Q9UT23
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fml1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase fml1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.05","synonyms":[{"name":"FANCM-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fml1","type":"exact"}],"termid":"PR:Q9UT23"}


id: PBO:0048607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIHCG inhibitor of miR-200b/200a/429 expression","termid":"PBO:0048607"}


id: MONDO:0014815
data:
  {"annotated_genes":["SJAG_01991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85590],"is_not":false,"summary":null,"term":"MONDO:0014815"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the LMAN2L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 52","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081215","GARD:22572","MEDGEN:903181","UMLS:C4225168","OMIM:616887"],"synonyms":[{"name":"LMAN2L autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT52","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in LMAN2L","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 52","type":"exact"},{"name":"intellectual disability, autosomal recessive 52","type":"exact"},{"name":"intellectual disability, autosomal recessive type 52","type":"exact"},{"name":"mental retardation, autosomal recessive 52","type":"exact"},{"name":"mental retardation, autosomal recessive type 52","type":"exact"}],"termid":"MONDO:0014815","terms_by_termid":{"MONDO:0014815":null},"xrefs":{"Monarch":{"xref_id":"0014815"}}}


id: PBO:0017417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transformed_into","termid":"PBO:0017417"}


id: MONDO:0002729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rhabdoid tumor that arises from the kidney. It occurs in children and it is associated with abnormalities of chromosome 22. It is characterized by the presence of cells with a large eccentric nucleus, prominent nucleolus, and abundant cytoplasm. The prognosis is poor.","definition_xrefs":["NCIT:C8715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid tumor","termid":"MONDO:0002728"},{"relation_name":"is_a","term_name":"kidney sarcoma","termid":"MONDO:0002930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"rhabdoid tumor of the kidney","secondary_identifiers":["EFO:1000512","UMLS:C0854917","DOID:3674","MEDGEN:208930"],"synonyms":[{"name":"MRTK","type":"exact"},{"name":"kidney rhabdoid cancer","type":"related"},{"name":"kidney rhabdoid tumor","type":"exact"},{"name":"kidney rhabdoid tumour","type":"exact"},{"name":"malignant rhabdoid tumor of kidney","type":"exact"},{"name":"malignant rhabdoid tumor of the kidney","type":"exact"},{"name":"malignant rhabdoid tumour of kidney","type":"exact"},{"name":"malignant rhabdoid tumour of the kidney","type":"exact"},{"name":"renal rhabdoid neoplasm","type":"exact"},{"name":"renal rhabdoid tumor","type":"exact"},{"name":"renal rhabdoid tumour","type":"exact"},{"name":"rhabdoid neoplasm of kidney","type":"exact"},{"name":"rhabdoid neoplasm of the kidney","type":"exact"},{"name":"rhabdoid tumor of kidney","type":"exact"},{"name":"rhabdoid tumor of the kidney","type":"exact"},{"name":"rhabdoid tumor of the kidney (RTK)","type":"exact"},{"name":"rhabdoid tumour of kidney","type":"exact"},{"name":"rhabdoid tumour of the kidney (RTK)","type":"exact"}],"termid":"MONDO:0002729","xrefs":{"Monarch":{"xref_id":"0002729"}}}


id: PBO:0028442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_double-strand_break_formation_at_mating-type_locus","termid":"PBO:0028442"}


id: MONDO:0010229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital condition characterized by the absence of hair on the scalp or entire body. The lack of hair is rarely absolute and is usually accompanied by incompletely grown, lanugo-like hair. It affects males twice as much as females and a familial tendency is common.","definition_xrefs":["NCIT:C35790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"alopecia totalis","termid":"MONDO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia, congenital","secondary_identifiers":["UMLS:C0265992","MESH:C535981","MEDGEN:78581","OMIM:300042","GARD:1470","SCTID:2965006"],"synonyms":[{"name":"ALPC","type":"related"},{"name":"alopecia, congenital","type":"exact"},{"name":"congenital alopecia","type":"exact"}],"termid":"MONDO:0010229","xrefs":{"Monarch":{"xref_id":"0010229"}}}


id: PBO:0018215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid uptake transporter","termid":"PBO:0018215"}


id: GO:0070613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing, a protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"regulates","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of protein processing","secondary_identifiers":["GO:0010953"],"synonyms":[{"name":"regulation of protein maturation by peptide bond cleavage","type":"exact"}],"termid":"GO:0070613"}


id: GO:0033018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the sarcoplasmic reticulum.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum","termid":"GO:0016529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"}


id: PBO:0002871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomeric 2,3-bisphosphoglycerate (BPG)-dependent phosphoglycerate mutase (PGAM), Gpm1","termid":"PBO:0002871"}


id: GO:0016633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-galactono-1,4-lactone + 2 ferricytochrome c = L-ascorbate + 2 ferrocytochrome c.","definition_xrefs":["EC:1.3.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, cytochrome as acceptor","termid":"GO:0016632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"galactonolactone dehydrogenase activity","secondary_identifiers":["MetaCyc:GALACTONOLACTONE-DEHYDROGENASE-RXN","RHEA:32367"],"synonyms":[{"name":"GLDHase activity","type":"related"},{"name":"GLDase activity","type":"related"},{"name":"L-galactono-1,4-lactone dehydrogenase activity","type":"exact"},{"name":"L-galactono-1,4-lactone:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"L-galactono-gamma-lactone dehydrogenase activity","type":"related"},{"name":"L-galactono-gamma-lactone:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"L-galactonolactone dehydrogenase activity","type":"related"}],"termid":"GO:0016633"}


id: PBO:0090147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan endo-1,3-alpha-glucosidase Agn1","termid":"PBO:0090147"}


id: FYPO:0001675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","termid":"FYPO:0001674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"increased alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0001675"}


id: GO:0097005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adipokinetic hormone receptor. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.","definition_xrefs":["GOC:sart","PMID:11904407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone receptor binding","termid":"GO:0051428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"adipokinetic hormone receptor binding","synonyms":[{"name":"AKH receptor binding","type":"exact"}],"termid":"GO:0097005"}


id: PBO:0081100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger E-box binding homeobox 1","termid":"PBO:0081100"}


id: GO:0070827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chromatin organization process that preserves chromatin in a stable functional or structural state.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin maintenance (obsolete GO:0070827)","termid":"GO:0070827"}


id: GO:0006883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of sodium ions within a cell.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"sodium ion homeostasis","termid":"GO:0055078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular sodium ion homeostasis","synonyms":[{"name":"cellular sodium ion homeostasis","type":"exact"}],"termid":"GO:0006883"}


id: PBO:0040359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 8","termid":"PBO:0040359"}


id: PBO:0048866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 11","termid":"PBO:0048866"}


id: PR:000027522
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase spindle elongation protein 1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q9HDY1-1, Ser-640/Ser-683/Ser-688/Ser-693, MOD:00046.","definition_xrefs":["PMID:18257517","PomBase:MAH","PMID:19686686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphase spindle elongation protein 1","termid":"PR:000027517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ase1/Phos(S640,S683,S688,S693)","pombase_gene_id":"SPAPB1A10.09","synonyms":[{"name":"PomBase_original_PRO_term_name: anaphase spindle elongation protein 1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ase1/Phos:1","type":"exact"},{"name":"ase1/Phos(S640,S683,S688,S693)","type":"exact"}],"termid":"PR:000027522"}


id: PBO:0047171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 4","termid":"PBO:0047171"}


id: GO:0022011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system axon ensheathment","termid":"GO:0032292"},{"relation_name":"is_a","term_name":"myelination","termid":"GO:0042552"},{"relation_name":"part_of","term_name":"Schwann cell development","termid":"GO:0014044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination in peripheral nervous system","synonyms":[{"name":"peripheral nervous system myelination","type":"exact"}],"termid":"GO:0022011"}


id: GO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a protein-DNA complex, resulting in the alteration of an existing complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"},{"relation_name":"is_a","term_name":"protein-DNA complex organization","termid":"GO:0071824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA complex remodeling","synonyms":[{"name":"protein-DNA complex remodelling","type":"exact"}],"termid":"GO:0001120"}


id: PBO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.65","termid":"PBO:0001842"}


id: GO:1900793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of shamixanthone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"shamixanthone metabolic process","termid":"GO:1900791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"shamixanthone biosynthetic process","synonyms":[{"name":"shamixanthone anabolism","type":"exact"},{"name":"shamixanthone biosynthesis","type":"exact"},{"name":"shamixanthone formation","type":"exact"},{"name":"shamixanthone synthesis","type":"exact"}],"termid":"GO:1900793"}


id: GO:0051134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer T cell activation.","definition_xrefs":["PMID:9133426","PMID:12154375","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of NK T cell activation","termid":"GO:0051133"},{"relation_name":"negatively_regulates","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of NK T cell activation","synonyms":[{"name":"down regulation of NK T cell activation","type":"exact"},{"name":"down-regulation of NK T cell activation","type":"exact"},{"name":"downregulation of NK T cell activation","type":"exact"},{"name":"inhibition of NK T cell activation","type":"narrow"},{"name":"negative regulation of NK T lymphocyte activation","type":"exact"},{"name":"negative regulation of NK T-cell activation","type":"exact"},{"name":"negative regulation of NK T-lymphocyte activation","type":"exact"},{"name":"negative regulation of NKT cell activation","type":"exact"},{"name":"negative regulation of NT cell activation","type":"exact"},{"name":"negative regulation of natural T cell activation","type":"exact"},{"name":"negative regulation of natural killer T cell activation","type":"exact"}],"termid":"GO:0051134"}


id: GO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of a growing fungal hypha.","definition_xrefs":["PMID:15976451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"hyphal tip","termid":"GO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"hyphal tip polarisome","termid":"GO:0031562"}


id: GO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the amphibian larva over time, from its formation to the mature structure. Amphibian larvae, sometimes called pollywogs or tadpoles, hatch from eggs and begin to grow limbs and other adult physical features at various times, depending on the species, before they metamorphose into the adult form.","definition_xrefs":["GOC:bf","PMID:27143402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amphibian larval development","termid":"GO:0002117"}


id: GO:0016554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a cytosine residue to uridine in an RNA molecule by deamination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytidine to uridine editing","secondary_identifiers":["Reactome:R-HSA-72200"],"termid":"GO:0016554"}


id: PBO:0057929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3655","termid":"PBO:0057929"}


id: PBO:0012603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 3, Pup3 (predicted)","termid":"PBO:0012603"}


id: MONDO:0013552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the AP4S1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 52","secondary_identifiers":["MEDGEN:481373","NORD:1991","OMIM:614067","GARD:15750","UMLS:C3279743","DOID:0110804"],"synonyms":[{"name":"AP4S1 hereditary spastic paraplegia","type":"exact"},{"name":"CPSQ6","type":"exact"},{"name":"SPG52","type":"exact"},{"name":"Spastic Paraplegia 52","type":"exact"},{"name":"autosomal recessive spastic paraplegia 52","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, 6","type":"related"},{"name":"cerebral palsy, spastic quadriplegic, 6, formerly","type":"related"},{"name":"hereditary spastic paraplegia 52","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in AP4S1","type":"exact"},{"name":"hereditary spastic paraplegia type 52","type":"exact"},{"name":"spastic paraplegia 52, autosomal recessive","type":"related"},{"name":"spastic quadriplegic cerebral palsy 6","type":"exact"}],"termid":"MONDO:0013552","xrefs":{"Monarch":{"xref_id":"0013552"}}}


id: PBO:0042626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 2A","termid":"PBO:0042626"}


id: GO:0055056
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[116954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of the D-enantiomer of the hexose monosaccharide glucose from one side of a membrane to the other.","definition_xrefs":["GOC:jsg","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"D-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015579","Reactome:R-HSA-8981574","Reactome:R-HSA-5632871","Reactome:R-HSA-8981570","Reactome:R-HSA-450095","Reactome:R-HSA-8981553","Reactome:R-HSA-5339524","Reactome:R-HSA-8981564","Reactome:R-HSA-429094","Reactome:R-HSA-5632804"],"termid":"GO:0055056","terms_by_termid":{"GO:0005358":null,"GO:0140108":null}}


id: PBO:0031374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_fused","termid":"PBO:0031374"}


id: MONDO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant tumor of undescended testis","secondary_identifiers":["ICD9:186.0","MEDGEN:509335","DOID:12276","UMLS:C0153595","SCTID:188219004"],"synonyms":[{"name":"malignant neoplasm of retained testis","type":"exact"},{"name":"malignant neoplasm of undescended testis","type":"exact"},{"name":"malignant tumor of retained testis","type":"exact"},{"name":"malignant tumour of retained testis","type":"exact"}],"termid":"MONDO:0001480","xrefs":{"Monarch":{"xref_id":"0001480"}}}


id: PBO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Rtr1 (predicted)","termid":"PBO:0002370"}


id: GO:0021924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts resulting in the expansion of a cell population in the external granule layer of the hindbrain. The external granule layer is the layer that originates from the rostral half of the rhombic lip in the first rhombomere.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain","termid":"GO:0021534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in external granule layer","termid":"GO:0021924"}


id: FYPO:0000193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which a cellular response to osmotic stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cellular response to osmotic stress","synonyms":[{"name":"abnormal cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000193"}


id: GO:0030896
data:
  {"annotated_genes":["SJAG_01605","SJAG_03026","SJAG_02771"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72712,73663,78620],"is_not":false,"summary":null,"term":"GO:0030896"}]},"cv_name":"cellular_component","definition":"Conserved heterotrimeric complex of PCNA-like proteins that is loaded onto DNA at sites of DNA damage.","definition_xrefs":["PMID:12531008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01605":null,"SJAG_02771":null,"SJAG_03026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"checkpoint clamp complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"CCC","type":"exact"},{"name":"Rad9-Hus1-Rad1 (9-1-1) clamp complex","type":"exact"}],"termid":"GO:0030896","terms_by_termid":{"GO:0030896":null}}


id: GO:0034886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-aminovinylacetate + H2O = succinic semialdehyde + NH3.","definition_xrefs":["UM-BBD_reactionID:r1351"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-aminovinylacetate deaminase activity (obsolete GO:0034886)","termid":"GO:0034886"}


id: PBO:0003616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutathione reductase Pgr1","termid":"PBO:0003616"}


id: PBO:0038714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 9","termid":"PBO:0038714"}


id: PBO:0017015
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Orc4 binding footprint at replication origins is extended in G1 in the presence of Cdc1 and the MCM complex","termid":"PBO:0017015"}


id: MONDO:1012005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alloimmune hemolytic anemia of the newborn, non-human animal","termid":"MONDO:1011684"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alloimmune hemolytic anemia of the newborn, dog","secondary_identifiers":["OMIA:000028-9615"],"termid":"MONDO:1012005","xrefs":{"Monarch":{"xref_id":"1012005"}}}


id: PBO:0025476
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysinuric protein intolerance","termid":"PBO:0025476"}


id: MONDO:0007325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choreatic disease","termid":"MONDO:0001595"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choreoathetosis, familial inverted","secondary_identifiers":["UMLS:C1861569","MEDGEN:348393","OMIM:118750","MESH:C566127"],"synonyms":[{"name":"choreoathetosis, familial inverted","type":"exact"},{"name":"infantile choreoathetosis of Fisher","type":"related"}],"termid":"MONDO:0007325","xrefs":{"Monarch":{"xref_id":"0007325"}}}


id: PBO:0048045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 3","termid":"PBO:0048045"}


id: GO:0055052
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex for the transport of metabolites into the cell, consisting of 5 subunits: two ATP-binding subunits, two membrane spanning subunits, and one substrate-binding subunit. In organisms with two membranes, the substrate-binding protein moves freely in the periplasmic space and joins the other subunits only when bound with substrate. In organisms with only one membrane the substrate-binding protein is tethered to the cytoplasmic membrane and associated with the other subunits. Transport of the substrate across the membrane is driven by the hydrolysis of ATP.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing","termid":"GO:0055052"}


id: GO:0048779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of erythrophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrophore differentiation","termid":"GO:0048778"},{"relation_name":"is_a","term_name":"negative regulation of pigment cell differentiation","termid":"GO:0050941"},{"relation_name":"negatively_regulates","term_name":"erythrophore differentiation","termid":"GO:0048773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrophore differentiation","synonyms":[{"name":"down regulation of erythrophore differentiation","type":"exact"},{"name":"down-regulation of erythrophore differentiation","type":"exact"},{"name":"downregulation of erythrophore differentiation","type":"exact"},{"name":"inhibition of erythrophore differentiation","type":"narrow"}],"termid":"GO:0048779"}


id: GO:0044094
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a host cell's nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. The host is the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"},{"relation_name":"part_of","term_name":"host cell nucleus","termid":"GO:0042025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear part","termid":"GO:0044094"}


id: PBO:0074846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 36C","termid":"PBO:0074846"}


id: PBO:0056465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 3","termid":"PBO:0056465"}


id: GO:0003115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of epinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by epinephrine","termid":"GO:0003115"}


id: PBO:0087952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF5B; GTPase that promotes Met-tRNAiMet binding to ribosomes and ribosomal subunit joining; promotes GTP-dependent maturation of 18S rRNA by Nob1p; protein abundance increases in response to DNA replication stress; homolog of bacterial IF2","termid":"PBO:0087952"}


id: GO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by a carbon dioxide stimulus is received and converted to a molecular signal by the vasomotor center of the central nervous system.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbon dioxide","termid":"GO:0003031"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by ischemic conditions","termid":"GO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of carbon dioxide by vasomotor center","termid":"GO:0002013"}


id: FYPO:0003115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of L-methionine (R)-S-oxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to L-methionine (R)-S-oxide","synonyms":[{"name":"resistance to L-methionine (R)-S-oxide during mitotic cell cycle","type":"related"},{"name":"resistance to L-methionine (R)-S-oxide during vegetative growth","type":"exact"},{"name":"resistant to L-methionine (R)-S-oxide","type":"exact"}],"termid":"FYPO:0003115"}


id: MONDO:0100220
data:
  {"annotated_genes":["SJAG_03626"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85636],"is_not":false,"summary":null,"term":"MONDO:0100220"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Rajab interstitial lung disease with brain calcifications","termid":"MONDO:0100214"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03626":null},"genotype_count":0,"is_obsolete":false,"name":"Rajab interstitial lung disease with brain calcifications 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436603","GARD:18298","MEDGEN:1770895","OMIM:619013"],"synonyms":[{"name":"RAJAB INTERSTITIAL LUNG DISEASE WITH BRAIN CALCIFICATIONS 2","type":"exact"},{"name":"RILDBC2","type":"exact"}],"termid":"MONDO:0100220","terms_by_termid":{"MONDO:0100220":null},"xrefs":{"Monarch":{"xref_id":"0100220"}}}


id: PBO:0058424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4794","termid":"PBO:0058424"}


id: PBO:0047358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXL12 pseudogene 1","termid":"PBO:0047358"}


id: FYPO:0004703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is longer and has a larger volume than normal, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"},{"relation_name":"is_a","term_name":"viable swollen elongated vegetative cell","termid":"FYPO:0002479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"viable curved, elongated, swollen vegetative cell","synonyms":[{"name":"curved elongated swollen viable cell","type":"exact"},{"name":"viable curved swollen elongated cell","type":"exact"},{"name":"viable curved, elongated, swollen cell during vegetative growth","type":"exact"},{"name":"viable curved, elongated, swollen vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004703"}


id: PBO:0030356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated_cell_during_cellular_hyperosmotic_response","termid":"PBO:0030356"}


id: SO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Queuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuosine","secondary_identifiers":["RNAMOD:043","http://en.wikipedia.org/wiki/Queuosine"],"synonyms":[{"name":" Q","type":"exact"}],"termid":"SO:0001317"}


id: PBO:0079644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Q family like 1","termid":"PBO:0079644"}


id: GO:0016151
data:
  {"annotated_genes":["SJAG_05338","SJAG_04679","SJAG_04896","SJAG_02766","SJAG_00309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58689,58956,59294,65249,65464],"is_not":false,"summary":null,"term":"GO:0016151"}]},"cv_name":"molecular_function","definition":"Binding to a nickel (Ni) cation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_02766":null,"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0046872","GO:0003674"],"is_obsolete":false,"name":"nickel cation binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null},"synonyms":[{"name":"Ni binding","type":"exact"},{"name":"nickel binding","type":"exact"}],"termid":"GO:0016151","terms_by_termid":{"GO:0016151":null}}


id: PBO:0116308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoadipate transaminase","termid":"PBO:0116308"}


id: PATO:0002389
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Growing horizontal to the ground without setting roots.","definition_xrefs":["PATO:PG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostrate","termid":"PATO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procumbent","termid":"PATO:0002389"}


id: PBO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A8","termid":"PBO:0039625"}


id: PBO:0082906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cystathionine gamma-synthase, converts cysteine into cystathionine; STR2 has a paralog, YML082W, that arose from the whole genome duplication","termid":"PBO:0082906"}


id: PBO:0111828
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPR repeats","termid":"PBO:0111828"}


id: GO:0050245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + quercitrin = L-rhamnose + quercetin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete quercitrinase activity (obsolete GO:0050245)","termid":"GO:0050245"}


id: GO:0006691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene metabolic process","secondary_identifiers":["Reactome:R-HSA-2142691"],"synonyms":[{"name":"leukotriene metabolism","type":"exact"}],"termid":"GO:0006691"}


id: PBO:0035753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_deactivation_of_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035753"}


id: MONDO:0014945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal myopathy","termid":"MONDO:0018949"},{"relation_name":"is_a","term_name":"SQSTM1-related multisystem proteinopathy","termid":"MONDO:0800464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0021179"],"is_obsolete":false,"name":"myopathy, distal, with rimmed vacuoles","secondary_identifiers":["MEDGEN:1728314","NANDO:1200218","OMIM:617158","UMLS:C5399975","DOID:0081363","GARD:16204"],"synonyms":[{"name":"DMRV","type":"exact"},{"name":"myopathy, distal, with rimmed vacuoles","type":"exact"},{"name":"myopathy, distal, with rimmed vacuoles; DMRV","type":"exact"}],"termid":"MONDO:0014945","xrefs":{"Monarch":{"xref_id":"0014945"}}}


id: PR:Q9USN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16A11.03c gene.","definition_xrefs":["UniProtKB:Q9USN2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0652 protein C16A11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.03c","synonyms":[{"name":"Spom972h-SPCC16A11.03c","type":"exact"}],"termid":"PR:Q9USN2"}


id: PR:O14107
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dni1 gene.","definition_xrefs":["UniProtKB:O14107","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fusion protein dni1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.07","synonyms":[{"name":"Spom972h-dni1","type":"exact"},{"name":"delayed minus-nitrogen induction protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14107"}


id: GO:0002829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a type 2 immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type 2 immune response","synonyms":[{"name":"down regulation of type 2 immune response","type":"exact"},{"name":"down-regulation of type 2 immune response","type":"exact"},{"name":"downregulation of type 2 immune response","type":"exact"},{"name":"inhibition of type 2 immune response","type":"narrow"},{"name":"negative regulation of T-helper 2 type immune response","type":"narrow"},{"name":"negative regulation of Th2 immune response","type":"narrow"}],"termid":"GO:0002829"}


id: GO:0048215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["PMID:10219233","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"},{"relation_name":"positively_regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of Golgi vesicle fusion to target membrane","synonyms":[{"name":"activation of Golgi vesicle fusion to target membrane","type":"narrow"},{"name":"stimulation of Golgi vesicle fusion to target membrane","type":"narrow"},{"name":"up regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"up-regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"upregulation of Golgi vesicle fusion to target membrane","type":"exact"}],"termid":"GO:0048215"}


id: PBO:0082311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartyl-tRNA synthetase, primarily cytoplasmic; homodimeric enzyme that catalyzes the specific aspartylation of tRNA(Asp); class II aminoacyl tRNA synthetase; binding to its own mRNA may confer autoregulation; shares five highly conserved amino acids with human that when mutated cause leukoencephalopathy characterized by hypomyelination with brain stem and spinal cord involvement and leg spasticity (HBSL)","termid":"PBO:0082311"}


id: MONDO:0004927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired mucocele that develops in the lacrimal sac. It is usually the result of nasolacrimal duct abnormalities or obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic inflammation of lacrimal passage","termid":"MONDO:0004923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryocystocele","secondary_identifiers":["ICD9:375.43","DOID:9939","MEDGEN:472901","UMLS:C0155241"],"synonyms":[{"name":"lacrimal mucocele","type":"exact"}],"termid":"MONDO:0004927","xrefs":{"Monarch":{"xref_id":"0004927"}}}


id: FYPO:0000799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide, also known as diamide. Cells stop growing (and may die) at a concentration of diamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to diamide","synonyms":[{"name":"hypersensitive to diamide","type":"exact"},{"name":"sensitive to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"},{"name":"sensitive to diamide during mitotic cell cycle","type":"related"},{"name":"sensitive to diamide during vegetative growth","type":"exact"}],"termid":"FYPO:0000799"}


id: PBO:0039456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 7","termid":"PBO:0039456"}


id: PBO:0084483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific component of the spindle pole body; subunit of the leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms a ring-like structure at the leading edge of the prospore membrane (PSM) during meiosis II; required for PSM growth and closure; DON1 has a paralog, CUE5, that arose from the whole genome","termid":"PBO:0084483"}


id: PBO:0062131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 11","termid":"PBO:0062131"}


id: PATO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's parts or projections being interlocked; for example, the fingers of two hands that are clasped.","definition_xrefs":["PATOC:wdahdul"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interdigitated","termid":"PATO:0001960"}


id: GO:0021952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron axonogenesis","termid":"GO:0021955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system projection neuron axonogenesis","synonyms":[{"name":"central nervous system axon tract development","type":"narrow"}],"termid":"GO:0021952"}


id: PBO:0075707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP2 antisense RNA 1","termid":"PBO:0075707"}


id: PBO:0030132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_copper_level","termid":"PBO:0030132"}


id: MONDO:0021294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the cardia of stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cardia carcinoma","termid":"MONDO:0003834"},{"relation_name":"is_a","term_name":"stomach carcinoma in situ","termid":"MONDO:0004716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma in situ of gastric cardia","secondary_identifiers":["SCTID:92560002","MEDGEN:91052","NCIT:C4428","UMLS:C0345795"],"synonyms":[{"name":"carcinoma in situ of cardia of stomach","type":"exact"},{"name":"carcinoma in situ of the cardia of the stomach","type":"exact"},{"name":"carcinoma in situ of the gastric cardia","type":"exact"},{"name":"cardia of stomach carcinoma in situ","type":"exact"},{"name":"cardia of stomach in situ carcinoma","type":"exact"},{"name":"gastric cardia carcinoma in situ","type":"exact"},{"name":"gastric cardia carcinoma in situ aJCC v6 and v7","type":"exact"},{"name":"stage 0 cardia of stomach carcinoma","type":"exact"},{"name":"stage 0 gastric cardia carcinoma","type":"exact"}],"termid":"MONDO:0021294","xrefs":{"Monarch":{"xref_id":"0021294"}}}


id: PBO:0084745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial leucyl-tRNA synthetase; also has direct role in splicing of several mitochondrial group I introns; indirectly required for mitochondrial genome maintenance; human homolog LARS2 can complement yeast null mutant, and is implicated in Perrault syndrome","termid":"PBO:0084745"}


id: PBO:0036384
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by mouse SPS1","termid":"PBO:0036384"}


id: GO:0015015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification, often by sulfation, of sugars incorporated into heparan sulfate after polymerization.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete heparan sulfate proteoglycan biosynthetic process, enzymatic modification (obsolete GO:0015015)","synonyms":[{"name":"heparan sulfate proteoglycan anabolism, enzymatic modification","type":"exact"},{"name":"heparan sulfate proteoglycan formation, enzymatic modification","type":"exact"},{"name":"heparan sulfate proteoglycan synthesis, enzymatic modification","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis, enzymatic modification","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthetic process, enzymatic modification","type":"exact"},{"name":"heparin proteoglycan biosynthetic process, enzymatic modification","type":"related"}],"termid":"GO:0015015"}


id: MONDO:0017712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of lipid absorption and transport characterized by steatorrhea with foul-smelling stools from birth, diminished serum carotene and vitamin E and a combined deficiency of the pancreatic enzymes lipase and colipase. Patients are otherwise healthy and develop normally with no apparent pancreatic disease. There have been no further descriptions in the literature since 1990.","definition_xrefs":["Orphanet:309111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic triacylglycerol lipase deficiency","termid":"MONDO:0013700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"combined pancreatic lipase-colipase deficiency","secondary_identifiers":["UMLS:C4706317","ICD10CM:K90.3","GARD:17403","MEDGEN:1631148"],"termid":"MONDO:0017712","xrefs":{"Monarch":{"xref_id":"0017712"}}}


id: GO:0100030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates histone acetylation.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone acetylation by transcription from RNA polymerase II promoter (obsolete GO:0100030)","termid":"GO:0100030"}


id: PBO:0074525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C1","termid":"PBO:0074525"}


id: MONDO:0016158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of narcolepsy characterized by excessive day-time sleepiness associated with uncontrollable sleep urges and cataplexy (loss of muscle tone often triggered by pleasant emotions).","definition_xrefs":["Orphanet:2073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"narcolepsy","termid":"MONDO:0021107"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy-cataplexy syndrome","secondary_identifiers":["MedDRA:10028713","ICD10CM:G47.419","MEDGEN:199638","GARD:7162","ICD10CM:G47.4","icd11.foundation:1851015159","ICD9:347.0","UMLS:C0751362"],"synonyms":[{"name":"Gelineau disease","type":"exact"},{"name":"Gelineau syndrome","type":"exact"},{"name":"Gelineau's syndrome","type":"exact"},{"name":"Gélineau disease","type":"exact"},{"name":"narcolepsy type 1","type":"exact"},{"name":"narcolepsy with cataplexy","type":"exact"},{"name":"narcolepsy-cataplexy syndrome","type":"exact"},{"name":"narcoleptic syndrome","type":"related"}],"termid":"MONDO:0016158","xrefs":{"Monarch":{"xref_id":"0016158"}}}


id: GO:0035765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a motor neuron precursor cell that contributes to formation of the dorsal motor nucleus of the vagus nerve.","definition_xrefs":["GOC:dgh","PMID:21262462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve formation","termid":"GO:0035764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor neuron precursor migration involved in dorsal motor nucleus of vagus nerve formation","termid":"GO:0035765"}


id: GO:0009967
data:
  {"annotated_genes":["SJAG_06622","SJAG_03405","SJAG_02945","SJAG_04666","SJAG_03453","SJAG_03048","SJAG_06621","SJAG_04910","SJAG_00781","SJAG_01837","SJAG_00318","SJAG_03936","SJAG_00424","SJAG_00143","SJAG_02424","SJAG_04259","SJAG_01181","SJAG_00610","SJAG_00027","SJAG_00082","SJAG_00457","SJAG_01978","SJAG_02231","SJAG_05030","SJAG_02486","SJAG_02605","SJAG_06588","SJAG_06592","SJAG_02183","SJAG_03828","SJAG_04551","SJAG_03903","SJAG_04776","SJAG_02135","SJAG_03371","SJAG_03705","SJAG_00845","SJAG_00561","SJAG_01150","SJAG_01805","SJAG_03969","SJAG_03089","SJAG_05184","SJAG_01787","SJAG_01199","SJAG_03907","SJAG_04496","SJAG_00209","SJAG_01587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101899,110729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[90531,92181,102595,117650,87845,89197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[113529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[116417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[95015,112227,108695,108692,111569,108693,108694,108697,108698,117113,108696,118024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[87904,103457,115330,90612,114369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[102137,110274,87299,93571,89763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[78160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[69066,72850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[75089,75667,72285,76213,88071,73847,110290,112606,94080,76584,95855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[97502,90958,106753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00209":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00610":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01978":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02486":null,"SJAG_02605":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03705":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03936":null,"SJAG_03969":null,"SJAG_04259":null,"SJAG_04496":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of signal transduction","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0035468"],"synonyms":[{"name":"activation of signal transduction","type":"narrow"},{"name":"positive regulation of signaling pathway","type":"related"},{"name":"positive regulation of signalling pathway","type":"related"},{"name":"stimulation of signal transduction","type":"narrow"},{"name":"up regulation of signal transduction","type":"exact"},{"name":"up-regulation of signal transduction","type":"exact"},{"name":"upregulation of signal transduction","type":"exact"}],"termid":"GO:0009967","terms_by_termid":{"GO:0031031":null,"GO:0032008":null,"GO:0050850":null,"GO:0062038":null,"GO:0090267":null,"GO:1900745":null,"GO:1903139":null,"GO:1904263":null,"GO:1904515":null,"GO:1905326":null,"GO:2000640":null}}


id: PBO:0059828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 2","termid":"PBO:0059828"}


id: GO:0140205
data:
  {"annotated_genes":["SJAG_01983","SJAG_01660","SJAG_00922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[95281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[107737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[102764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of an oligopeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01660":null,"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"oligopeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140205","terms_by_termid":{"GO:0098709":null,"GO:0140206":null,"GO:0140207":null,"GO:1901583":null}}


id: PBO:0080618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 54","termid":"PBO:0080618"}


id: SO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which bacterial RNA polymerase binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prokaryotic_promoter","termid":"SO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter","synonyms":[{"name":"bacterial RNApol promoter","type":"exact"}],"termid":"SO:0000613"}


id: PBO:0029418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_palmitoylation_during_meiosis","termid":"PBO:0029418"}


id: FYPO:0006552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cytoplasm","termid":"FYPO:0006098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to cytoplasm","synonyms":[{"name":"increased protein localisation to cytoplasm","type":"exact"},{"name":"increased protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"increased protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006552"}


id: PBO:0048147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6 pseudogene 3","termid":"PBO:0048147"}


id: MONDO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eccrine adenocarcinoma (obsolete MONDO:0003207)","termid":"MONDO:0003207","xrefs":{"Monarch":{"xref_id":"0003207"}}}


id: GO:0002680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lymphoid progenitor cell becomes committed to becoming a pro-T cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pro-T cell lineage commitment","synonyms":[{"name":"pro-T cell fate commitment","type":"exact"},{"name":"pro-T lymphocyte fate commitment","type":"exact"},{"name":"pro-T lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002680"}


id: GO:1901303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cargo loading into a COPII-coated vesicle.","definition_xrefs":["PMID:15899885","GOC:TermGenie","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of cargo loading into COPII-coated vesicle","termid":"GO:1901301"},{"relation_name":"negatively_regulates","term_name":"COPII-coated vesicle cargo loading","termid":"GO:0090110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cargo loading into COPII-coated vesicle","synonyms":[{"name":"down regulation of COPII coat-cargo complex assembly","type":"related"},{"name":"down regulation of cargo loading into COPII vesicle","type":"exact"},{"name":"down regulation of cargo loading into COPII-coated vesicle","type":"exact"},{"name":"down regulation of cargo selection into COPII-coated vesicle","type":"exact"},{"name":"down-regulation of COPII coat-cargo complex assembly","type":"related"},{"name":"down-regulation of cargo loading into COPII vesicle","type":"exact"},{"name":"down-regulation of cargo loading into COPII-coated vesicle","type":"exact"},{"name":"down-regulation of cargo selection into COPII-coated vesicle","type":"exact"},{"name":"downregulation of COPII coat-cargo complex assembly","type":"related"},{"name":"downregulation of cargo loading into COPII vesicle","type":"exact"},{"name":"downregulation of cargo loading into COPII-coated vesicle","type":"exact"},{"name":"downregulation of cargo selection into COPII-coated vesicle","type":"exact"},{"name":"inhibition of COPII coat-cargo complex assembly","type":"related"},{"name":"inhibition of COPII vesicle protein binding","type":"narrow"},{"name":"inhibition of cargo loading into COPII vesicle","type":"exact"},{"name":"inhibition of cargo loading into COPII-coated vesicle","type":"narrow"},{"name":"inhibition of cargo selection into COPII-coated vesicle","type":"exact"},{"name":"inhibition of protein sorting into COPII-coated vesicles","type":"exact"},{"name":"negative regulation of COPII coat-cargo complex assembly","type":"related"},{"name":"negative regulation of cargo loading into COPII vesicle","type":"exact"},{"name":"negative regulation of cargo selection into COPII-coated vesicle","type":"exact"}],"termid":"GO:1901303"}


id: PBO:0065140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase Y-linked (pseudogene)","termid":"PBO:0065140"}


id: PBO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 family","termid":"PBO:0000413"}


id: GO:0014051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gamma-aminobutyric acid by a cell or a tissue. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transport","termid":"GO:0015812"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid secretion","synonyms":[{"name":"GABA secretion","type":"exact"}],"termid":"GO:0014051"}


id: PBO:0069539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 809, pseudogene","termid":"PBO:0069539"}


id: PBO:0087553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP, nuclear RNase P and telomerase; forms a soluble heterodimer with Pop7p that binds P3 domain of RNase MRP and RNase P RNAs; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087553"}


id: GO:0014911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of smooth muscle cell migration.","definition_xrefs":["GOC:mtg_muscle","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell migration","termid":"GO:0014910"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell migration","termid":"GO:0014911"}


id: MONDO:0010896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pigment-dispersion syndrome is an eye disorder that occurs when pigment granules that normally adhere to the back of the iris (the colored part of the eye) flake off into the clear fluid produced by the eye (aqueous humor). These pigment granules may flow towards the drainage canals of the eye, slowly clogging them and raising the pressure within the eye (intraocular pressure or IOP). This rise in eye pressure can cause damage to the optic nerve (the nerve in the back of the eye that carries visual images to the brain). If the optic nerve becomes damaged, pigment-dispersion syndrome becomes pigmentary glaucoma. This happens in about 30% of cases. Pigment-dispersion syndrome commonly presents between the second and fourth decades, which is earlier than other types of glaucoma. While men and women are affected in equal numbers, men develop pigmentary glaucoma up to 3 times more often than women. Myopia (nearsightedness) appears to be an important risk factor in the development of pigment-dispersion syndrome and is present in up to 80% of affected individuals. The condition may be sporadic or follow an autosomal dominant pattern of inheritance with reduced penetrance. At least one gene locus on chromosome 7 has been identified. Pigment-dispersion syndrome can be treated with eye drops or other medications. In some cases, laser surgery may be performed.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pigment dispersion syndrome","secondary_identifiers":["DOID:0060680","MEDGEN:220866","MESH:C563184","NCIT:C187288","OMIM:600510","GARD:4356","Orphanet:26823","SCTID:392133001","UMLS:C1271398"],"synonyms":[{"name":"GPDS1","type":"related"},{"name":"glaucoma, pigment-dispersion type","type":"related"},{"name":"glaucoma-RELATED pigment dispersion syndrome","type":"related"},{"name":"glaucoma-related pigment dispersion syndrome","type":"exact"},{"name":"pigment dispersion syndrome","type":"exact"},{"name":"pigment-dispersion syndrome","type":"related"},{"name":"pigment-dispersion type glaucoma","type":"exact"}],"termid":"MONDO:0010896","xrefs":{"Monarch":{"xref_id":"0010896"}}}


id: MONDO:0044995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the parasympathetic nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasympathetic nervous system disorder","secondary_identifiers":["MEDGEN:148205","SCTID:46091002","UMLS:C0750945"],"synonyms":[{"name":"disease of parasympathetic nervous system","type":"exact"},{"name":"disease or disorder of parasympathetic nervous system","type":"exact"},{"name":"disorder of parasympathetic nervous system","type":"exact"},{"name":"parasympathetic nervous system disease","type":"exact"},{"name":"parasympathetic nervous system disease or disorder","type":"exact"}],"termid":"MONDO:0044995","xrefs":{"Monarch":{"xref_id":"0044995"}}}


id: GO:1990525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Baculovirus Inhibitor of apoptosis protein Repeat (BIR) domain.","definition_xrefs":["InterPro:IPR001370","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"BIR domain binding","synonyms":[{"name":"Baculovirus Inhibitor of apoptosis protein Repeat domain binding","type":"exact"}],"termid":"GO:1990525"}


id: GO:0051126
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin nucleation","termid":"GO:0051125"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin nucleation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of actin nucleation","type":"exact"},{"name":"down-regulation of actin nucleation","type":"exact"},{"name":"downregulation of actin nucleation","type":"exact"},{"name":"inhibition of actin nucleation","type":"narrow"}],"termid":"GO:0051126","terms_by_termid":{"GO:0034316":null}}


id: PBO:0026869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_telomere","termid":"PBO:0026869"}


id: GO:0097372
data:
  {"annotated_genes":["SJAG_04039","SJAG_01075","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58148,89817,103948],"is_not":false,"summary":null,"term":"GO:0097372"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 18) + NAD+ + H2O = histone H3 L-lysine (position 18) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K18 to NAD, producing nicotinamide.","definition_xrefs":["PMID:22722849","PMID:28450737","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0140096","GO:0033558","GO:0016740","GO:0019213"],"is_obsolete":false,"name":"histone H3K18 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H3-K18 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone H3K18 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K18 specific)","type":"exact"}],"termid":"GO:0097372","terms_by_termid":{"GO:0097372":null}}


id: GO:0034308
data:
  {"annotated_genes":["SJAG_00240","SJAG_01742","SJAG_01970","SJAG_03538","SJAG_04067","SJAG_03362","SJAG_00827","SJAG_00381","SJAG_01414","SJAG_02047","SJAG_05006","SJAG_02406","SJAG_02421","SJAG_03370","SJAG_03743","SJAG_03822","SJAG_04282","SJAG_02420","SJAG_04866"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114359,98486,114360,98487,88266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[96333],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[113427,88797],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[73804,78223,61509,73700,76842,69799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[58794,65954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[99288,110198,110197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving primary alcohols. A primary alcohol is any alcohol in which a hydroxy group, -OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_00381":null,"SJAG_00827":null,"SJAG_01414":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03370":null,"SJAG_03538":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"primary alcohol metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"monohydric alcohol metabolic process","type":"exact"},{"name":"primary alcohol metabolism","type":"exact"}],"termid":"GO:0034308","terms_by_termid":{"GO:0006772":null,"GO:0009228":null,"GO:0019655":null,"GO:0036172":null,"GO:0090180":null,"GO:2001172":null}}


id: PBO:0028424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_actomyosin_contractile_ring,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028424"}


id: PBO:0053866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1141","termid":"PBO:0053866"}


id: GO:0086075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from one cardiomyocyte to an adjacent cardiomyocyte. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cell communication by electrical coupling","termid":"GO:1903763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}


id: MONDO:0009101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Wolfram syndrome in which the cause of the disease is a mutation in the WFS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"Wolfram syndrome","termid":"MONDO:0018105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolfram syndrome 1","secondary_identifiers":["OMIM:222300","DOID:0110629","UMLS:C4551693","MEDGEN:1641635"],"synonyms":[{"name":"WFS1","type":"exact"},{"name":"WFS1 Wolfram syndrome","type":"exact"},{"name":"WOLFRAM syndrome 1","type":"related"},{"name":"Wfs","type":"related"},{"name":"Wolfram syndrome 1","type":"exact"},{"name":"Wolfram syndrome caused by mutation in WFS1","type":"exact"},{"name":"Wolfram syndrome type 1","type":"exact"},{"name":"diabetes insipidus and mellitus with optic atrophy and deafness","type":"related"}],"termid":"MONDO:0009101","xrefs":{"Monarch":{"xref_id":"0009101"}}}


id: PBO:0075242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 12","termid":"PBO:0075242"}


id: PATO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000244 ocular reflex (obsolete PATO:0000244)","termid":"PATO:0000244"}


id: MONDO:0020370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cogan-Reese syndrome is a clinical variant of iridocorneal endothelial (ICE) syndrome characterized by variable iris atrophy, pigmented and pedunculated nodules on the iris and corneal abonormalities. Secondary glaucoma is also a common complication of the disease.","definition_xrefs":["Orphanet:98980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridocorneal endothelial syndrome","termid":"MONDO:0018988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cogan-Reese syndrome","secondary_identifiers":["icd11.foundation:1968906450","MEDGEN:218910","UMLS:C1168173","NCIT:C84644","DOID:0060217","SCTID:404633004","MedDRA:10059200","GARD:6125"],"termid":"MONDO:0020370","xrefs":{"Monarch":{"xref_id":"0020370"}}}


id: GO:0010972
data:
  {"annotated_genes":["SJAG_03026","SJAG_03073","SJAG_01205","SJAG_04671","SJAG_02858","SJAG_04332","SJAG_03695","SJAG_02592","SJAG_00640","SJAG_06592","SJAG_01076","SJAG_04394","SJAG_03854","SJAG_01118","SJAG_04280","SJAG_01873","SJAG_01044","SJAG_01010","SJAG_02723","SJAG_03160","SJAG_04597","SJAG_03927","SJAG_02563","SJAG_02392","SJAG_01146","SJAG_02098","SJAG_02332","SJAG_01429","SJAG_01605","SJAG_02576","SJAG_05373","SJAG_02771","SJAG_00082","SJAG_00600","SJAG_03067","SJAG_01084","SJAG_00526","SJAG_02266","SJAG_03602","SJAG_02074","SJAG_00318","SJAG_00364","SJAG_04287","SJAG_01680","SJAG_03942","SJAG_01855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78260,92690,92983,93333,94128,100752,104254,106407,106771,108327,111183,111567,112225,114213],"is_not":false,"summary":null,"term":"GO:0010972"},{"annotations":[89756,94168,115747,101192,100295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[91194,78625,93725,100296,117018,98952,109068,99119,79199,111781,74570,116845,70875,72017,106375,116544,115803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[95607,98185,94299,115749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[99121,72015,111476,100807,109069,91195,75019,117454,88880,116759,79062,106376,89974,91557,100297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010389"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle G2/M phase transition","termid":"GO:1902750"},{"relation_name":"negatively_regulates","term_name":"G2/M transition of mitotic cell cycle","termid":"GO:0000086"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03160":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"negative regulation of G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of mitotic entry","type":"exact"}],"termid":"GO:0010972","terms_by_termid":{"GO:0007095":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0044878":null}}


id: FYPO:0004054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to nucleus during cellular response to salt stress","synonyms":[{"name":"abolished protein localisation to nucleus during cellular response to salt stress","type":"exact"},{"name":"abolished protein localization to nucleus during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleus during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during salt stress","type":"exact"},{"name":"nuclear exclusion during cellular response to salt stress","type":"related"},{"name":"nuclear protein exclusion during cellular response to salt stress","type":"related"},{"name":"protein localization to nucleus abolished during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004054"}


id: PBO:0040436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A2 pseudogene 1","termid":"PBO:0040436"}


id: PBO:0051583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18","termid":"PBO:0051583"}


id: MONDO:0013580
data:
  {"annotated_genes":["SJAG_03064"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85698],"is_not":false,"summary":null,"term":"MONDO:0013580"}]},"cv_name":"mondo","definition":"Pyruvate dehydrogenase E1-beta deficiency is an extremely rare form of pyruvate dehydrogenase deficiency (PDHD) characterized by severe lactic acidosis, developmental delay and hypotonia.","definition_xrefs":["Orphanet:255138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03064":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0004069","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"pyruvate dehydrogenase E1-beta deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17236","MESH:C566729","OMIM:614111","MEDGEN:481471","UMLS:C3279841"],"synonyms":[{"name":"PDHBD","type":"exact"},{"name":"pyruvate dehydrogenase E1-BETA deficiency","type":"related"},{"name":"pyruvate dehydrogenase E1-beta deficiency","type":"exact"},{"name":"pyruvate dehydrogenase complex E1 component subunit beta deficiency","type":"exact"}],"termid":"MONDO:0013580","terms_by_termid":{"MONDO:0013580":null},"xrefs":{"Monarch":{"xref_id":"0013580"}}}


id: GO:0019137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a thioglucoside + H2O = a thiol + a sugar.","definition_xrefs":["EC:3.2.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"thioglucosidase activity","secondary_identifiers":["MetaCyc:RXN-9946"],"synonyms":[{"name":"myrosinase activity","type":"exact"},{"name":"sinigrase activity","type":"exact"},{"name":"sinigrinase activity","type":"exact"},{"name":"thioglucoside glucohydrolase activity","type":"exact"}],"termid":"GO:0019137"}


id: GO:0045644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eosinophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte differentiation","termid":"GO:0030853"},{"relation_name":"is_a","term_name":"regulation of eosinophil differentiation","termid":"GO:0045643"},{"relation_name":"negatively_regulates","term_name":"eosinophil differentiation","termid":"GO:0030222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil differentiation","synonyms":[{"name":"down regulation of eosinophil differentiation","type":"exact"},{"name":"down-regulation of eosinophil differentiation","type":"exact"},{"name":"downregulation of eosinophil differentiation","type":"exact"},{"name":"inhibition of eosinophil differentiation","type":"narrow"}],"termid":"GO:0045644"}


id: PBO:0052906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-3","termid":"PBO:0052906"}


id: PBO:0085626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in excretion of putrescine and spermidine; putative polyamine transporter in the Golgi or post-Golgi vesicles","termid":"PBO:0085626"}


id: GO:0033526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next, from other compounds, including L-glutamate.","definition_xrefs":["MetaCyc:PWY-5188","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0033013"],"is_obsolete":false,"name":"tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"tetrapyrrole formation from glutamate","type":"exact"},{"name":"tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:0033526"}


id: PBO:0066389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ like helicase 5","termid":"PBO:0066389"}


id: PBO:0041305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 15","termid":"PBO:0041305"}


id: GO:0047989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-[(R)-3-hydroxybutanoyloxy]butanoate + H2O = 2 (R)-3-hydroxybutanoate + H+.","definition_xrefs":["EC:3.1.1.22","RHEA:10172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydroxybutyrate-dimer hydrolase activity","secondary_identifiers":["MetaCyc:HYDROXYBUTYRATE-DIMER-HYDROLASE-RXN","KEGG_REACTION:R00048"],"synonyms":[{"name":"(R)-3-((R)-3-hydroxybutanoyloxy)butanoate hydroxybutanoylhydrolase activity","type":"related"},{"name":"D-(-)-3-hydroxybutyrate-dimer hydrolase activity","type":"related"}],"termid":"GO:0047989"}


id: GO:0009643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to light intensity in which exposure to medium-intensity light results in increased tolerance to high-intensity light.","definition_xrefs":["GOC:mah","PMID:11069694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photosynthetic acclimation","synonyms":[{"name":"light acclimatization","type":"exact"},{"name":"photoacclimation","type":"exact"}],"termid":"GO:0009643"}


id: MOD:01751
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-129 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"},{"relation_name":"derives_from","term_name":"cysTMT6plex-129 reporter+balance reagent cysteine disulfide","termid":"MOD:01826"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-129 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-129 reporter fragment","type":"exact"}],"termid":"MOD:01751"}


id: GO:1903506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of nucleic acid-templated transcription.","definition_xrefs":["GO_REF:0000058","GOC:txnOH","GOC:TermGenie","GOC:vw","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nucleic acid-templated transcription (obsolete GO:1903506)","termid":"GO:1903506"}


id: PBO:0056942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9-2","termid":"PBO:0056942"}


id: PBO:0000193
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkali-sensitive linkage","termid":"PBO:0000193"}


id: PBO:0087436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit e of mitochondrial F1F0-ATPase; ATPase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; essential for the dimeric and oligomeric state of ATP synthase, which in turn determines the shape of inner membrane cristae","termid":"PBO:0087436"}


id: RO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p directly activates q if and only if p is immediately upstream of q and p is the realization of a function to increase the rate or activity of q","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_positively_regulates","termid":"RO:0002629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_activates","termid":"RO:0002406"}


id: PR:O14061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ast1 gene.","definition_xrefs":["UniProtKB:O14061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asteroid homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.05","synonyms":[{"name":"Spom972h-ast1","type":"exact"}],"termid":"PR:O14061"}


id: MONDO:0006650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ischemia or infarction of the spinal cord in the distribution of the anterior spinal artery, which supplies the ventral two-thirds of the spinal cord. This condition is usually associated with atherosclerosis of the aorta and may result from dissection of an aortic aneurysm or rarely dissection of the anterior spinal artery. Clinical features include weakness and loss of pain and temperature sensation below the level of injury, with relative sparing of position and vibratory sensation. (From Adams et al., Principles of Neurology, 6th ed, pp1249-50)","definition_xrefs":["MESH:D020759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior spinal artery syndrome","secondary_identifiers":["MedDRA:10002703","EFO:1000810","ICD9:433.80","DOID:6712","MEDGEN:65125","SCTID:2972007","UMLS:C0221069"],"synonyms":[{"name":"anterior spinal artery syndromic disease","type":"exact"},{"name":"syndromic disease of anterior spinal artery","type":"exact"}],"termid":"MONDO:0006650","xrefs":{"Monarch":{"xref_id":"0006650"}}}


id: RO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a  process that regulates a transport process and the entity transported by that process.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_transport_of","termid":"RO:0002011"}


id: SO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against a translated sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated_nucleotide_match","synonyms":[{"name":"translated nucleotide match","type":"exact"}],"termid":"SO:0000181"}


id: PATO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation quality inhering in a radioactive substance by virtue of its transformation (disintegration) rate.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation quality","termid":"PATO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity (of a radionuclide)","synonyms":[{"name":"radioactivity","type":"exact"}],"termid":"PATO:0001740"}


id: PBO:0090655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase","termid":"PBO:0090655"}


id: MONDO:0021969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Banti syndrome (obsolete MONDO:0021969)","secondary_identifiers":["NANDO:1200438"],"termid":"MONDO:0021969","xrefs":{"Monarch":{"xref_id":"0021969"}}}


id: MONDO:0015008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 1","termid":"MONDO:0015047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, type 1J","secondary_identifiers":["EFO:0009302","DOID:0080953","GARD:16220","MEDGEN:934597","OMIM:617297","UMLS:C4310630"],"synonyms":[{"name":"AI1J","type":"related"},{"name":"amelogenesis imperfecta, type 1J","type":"exact"},{"name":"amelogenesis imperfecta, type Ij","type":"exact"}],"termid":"MONDO:0015008","xrefs":{"Monarch":{"xref_id":"0015008"}}}


id: GO:2000838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of androstenedione secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of androstenedione secretion","termid":"GO:2000837"},{"relation_name":"negatively_regulates","term_name":"androstenedione secretion","termid":"GO:0035941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of androstenedione secretion","synonyms":[{"name":"negative regulation of androst-4-ene-3,17-dione secretion","type":"exact"}],"termid":"GO:2000838"}


id: PBO:0086842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pulcherrimin transporter; involved in uptake of iron-transporting siderophore, pulcherrimin","termid":"PBO:0086842"}


id: PBO:0085972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; predicted to contain a single transmembrane domain; mutant has increased aneuploidy tolerance; localized to both the mitochondrial outer membrane and the plasma membrane; protein abundance increases in response to DNA replication stress","termid":"PBO:0085972"}


id: MONDO:0030971
data:
  {"annotated_genes":["SJAG_04928"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85332],"is_not":false,"summary":null,"term":"MONDO:0030971"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04928":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 78 with autoimmunity and developmental delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543159","OMIM:619220","MEDGEN:1785772"],"synonyms":[{"name":"IMD78","type":"exact"},{"name":"TPP2 deficiency","type":"exact"},{"name":"immunodeficiency 78 with autoimmunity and developmental delay","type":"exact"}],"termid":"MONDO:0030971","terms_by_termid":{"MONDO:0030971":null},"xrefs":{"Monarch":{"xref_id":"0030971"}}}


id: MONDO:0017595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"aggressive B-cell non-Hodgkin lymphoma","secondary_identifiers":["NCIT:C178541","GARD:21245","Orphanet:300846","MEDGEN:1791561","UMLS:C5555120"],"synonyms":[{"name":"aggressive B-cell NHL","type":"exact"}],"termid":"MONDO:0017595","xrefs":{"Monarch":{"xref_id":"0017595"}}}


id: GO:0014741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle hypertrophy","termid":"GO:0014741"}


id: PBO:0068795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 32, pseudogene","termid":"PBO:0068795"}


id: MOD:01420
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a cysteine thiol with the carbonyl of the preceding residue to form a thiazole or thiazoline ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"oxazole/thiazole ring crosslinked residues","termid":"MOD:00690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"}


id: PBO:0071507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 10","termid":"PBO:0071507"}


id: MONDO:0019659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pfeiffer syndrome type 1 (PS1) is a mild to moderately severe type of Pfeiffer syndrome (PS), characterized by bicoronal craniosynostosis, variable finger and toe malformations, and in most cases, normal intellectual development.","definition_xrefs":["Orphanet:93258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pfeiffer syndrome","termid":"MONDO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Pfeiffer syndrome type 1","secondary_identifiers":["MEDGEN:1726699","GARD:16807","icd11.foundation:490354109","UMLS:C5438812"],"synonyms":[{"name":"Pfeiffer syndrome type 1","type":"exact"},{"name":"classic Pfeiffer syndrome","type":"exact"}],"termid":"MONDO:0019659","xrefs":{"Monarch":{"xref_id":"0019659"}}}


id: GO:0090617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["PMID:25181358","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0140053","GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA 5'-end processing","termid":"GO:0090617"}


id: PBO:0055450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2882","termid":"PBO:0055450"}


id: PBO:0044232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 1 pseudogene 1","termid":"PBO:0044232"}


id: SO:0000495
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 12 or 23 nucleotide spacer between the 3'D-HEPTAMER and 3'D-NONAMER of a 3'D-RS.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"three_prime_D_recombination_signal_sequence","termid":"SO:0000570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_spacer","synonyms":[{"name":"3'D-SPACER","type":"exact"},{"name":"three prime D spacer","type":"exact"}],"termid":"SO:0000495"}


id: PBO:0055672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase B, lysosomal acid type","termid":"PBO:0055672"}


id: PBO:0091456
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3125118_3125119insT","termid":"PBO:0091456"}


id: PBO:0040036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 3","termid":"PBO:0040036"}


id: MONDO:0006039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral or bacterial infectious process affecting the large intestine.","definition_xrefs":["NCIT:C78359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"infectious colitis","secondary_identifiers":["MEDGEN:75798","UMLS:C0277524","SCTID:39341005","EFO:1000035"],"synonyms":[{"name":"infectious colitis","type":"exact"}],"termid":"MONDO:0006039","xrefs":{"Monarch":{"xref_id":"0006039"}}}


id: PBO:0071696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 2","termid":"PBO:0071696"}


id: GO:0052839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + diphospho-1D-myo-inositol tetrakisphosphate = ADP + bis(diphospho)-1D-myo-inositol trisphosphate.","definition_xrefs":["PMID:10827188","PMID:11502751","PMID:18355727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"diphosphoinositol tetrakisphosphate kinase activity","secondary_identifiers":["Reactome:R-HSA-1855193","Reactome:R-HSA-1855230"],"synonyms":[{"name":"PP-IP4 kinase activity","type":"exact"},{"name":"inositol diphosphate tetrakisphosphate kinase activity","type":"exact"}],"termid":"GO:0052839"}


id: PBO:0029927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_GMP_binding","termid":"PBO:0029927"}


id: PBO:0068462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 39, pseudogene","termid":"PBO:0068462"}


id: PBO:0034445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_spindle_during_meiosis_I","termid":"PBO:0034445"}


id: GO:0047264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: heteroglycan + GDP-mannose = alpha-D-mannosylheteroglycan + GDP. 1,2- and 1,3-mannosyl bonds are formed.","definition_xrefs":["EC:2.4.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"heteroglycan alpha-mannosyltransferase activity","synonyms":[{"name":"GDP mannose alpha-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:heteroglycan 2-(or 3-)-alpha-D-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-heteroglycan alpha-mannosyltransferase activity","type":"related"},{"name":"heteropolysaccharide alpha-mannosyltransferase activity","type":"exact"}],"termid":"GO:0047264"}


id: MONDO:0020354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma of choroid and retina is a rare, genetic developmental defect during embryogenesis characterized by the partial absence of retinal pigment epithelium and choroid, most frequently located in the inferonasal quadrant. Patients usually present reduced vision and have an increased risk for retinal detachment. Other ocular anomalies (e.g. coloboma of iris, microcornea, nystagmus, strabismus, microphthalmos) are usually associated, however it may also be isolated.","definition_xrefs":["Orphanet:98942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, ocular, autosomal dominant","termid":"MONDO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma of choroid and retina","secondary_identifiers":["icd11.foundation:20223105","SCTID:39302008","GARD:16875","MEDGEN:1643994","UMLS:C4708599"],"synonyms":[{"name":"choroidal coloboma","type":"related"},{"name":"retinal coloboma","type":"related"},{"name":"retinochoroidal coloboma","type":"related"}],"termid":"MONDO:0020354","xrefs":{"Monarch":{"xref_id":"0020354"}}}


id: PBO:0061542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSUN5 pseudogene 2","termid":"PBO:0061542"}


id: PBO:0076072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20 related adaptor alpha","termid":"PBO:0076072"}


id: GO:0032677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-8 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-8 production","termid":"GO:0032637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-8 production","secondary_identifiers":["GO:2000482","GO:0045414"],"synonyms":[{"name":"regulation of IL-8 production","type":"exact"},{"name":"regulation of interleukin-8 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-8 secretion","type":"narrow"}],"termid":"GO:0032677"}


id: GO:0120161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cold-induced thermogenesis.","definition_xrefs":["PMID:27876809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"cold-induced thermogenesis","termid":"GO:0106106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cold-induced thermogenesis","synonyms":[{"name":"regulation of CIT","type":"related"}],"termid":"GO:0120161"}


id: GO:0045585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytotoxic T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"regulation of cytotoxic T cell differentiation","termid":"GO:0045583"},{"relation_name":"positively_regulates","term_name":"cytotoxic T cell differentiation","termid":"GO:0045065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cytotoxic T cell differentiation","synonyms":[{"name":"activation of cytotoxic T cell differentiation","type":"narrow"},{"name":"positive regulation of cytotoxic T cell development","type":"related"},{"name":"positive regulation of cytotoxic T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of cytotoxic T-cell differentiation","type":"exact"},{"name":"positive regulation of cytotoxic T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of cytotoxic T cell differentiation","type":"narrow"},{"name":"up regulation of cytotoxic T cell differentiation","type":"exact"},{"name":"up-regulation of cytotoxic T cell differentiation","type":"exact"},{"name":"upregulation of cytotoxic T cell differentiation","type":"exact"}],"termid":"GO:0045585"}


id: GO:0031825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1F serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1F serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 1F receptor binding","type":"exact"},{"name":"type 1F serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031825"}


id: PBO:0041675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CADM2 antisense RNA 1","termid":"PBO:0041675"}


id: PBO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by MBF complex","termid":"PBO:0001302"}


id: MONDO:0017820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease in which Cushing syndrome is a major feature.","gene_count":0,"genotype_count":0,"name":"obsolete obsolete disease with Cushing syndrome as a major feature (obsolete MONDO:0017820)","secondary_identifiers":["Orphanet:314749"],"synonyms":[{"name":"rare disease with Cushing syndrome as a major feature","type":"exact"}],"termid":"MONDO:0017820","xrefs":{"Monarch":{"xref_id":"0017820"}}}


id: FYPO:0007393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum with both ends at the cell tip(s). The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PMID:32101481","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized, misoriented septum","termid":"FYPO:0003210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000032","FYPO:0000631","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"septum mislocalized to cell tip","synonyms":[{"name":"septum mislocalized to cell tip during mitotic cell cycle","type":"related"},{"name":"septum mislocalized to cell tip during vegetative growth","type":"exact"},{"name":"tip septation","type":"exact"}],"termid":"FYPO:0007393"}


id: PBO:0048003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD4A antisense RNA 1","termid":"PBO:0048003"}


id: PBO:0016577
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana XCT","termid":"PBO:0016577"}


id: MONDO:1012390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory ataxic neuropathy, non-human animal","termid":"MONDO:1011878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ataxic neuropathy, dog","secondary_identifiers":["OMIA:001467-9615"],"termid":"MONDO:1012390","xrefs":{"Monarch":{"xref_id":"1012390"}}}


id: MONDO:0957594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 87","secondary_identifiers":["UMLS:C5882687","DOID:0070586","MEDGEN:1852637","OMIM:620500"],"termid":"MONDO:0957594","xrefs":{"Monarch":{"xref_id":"0957594"}}}


id: PBO:0052731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 23","termid":"PBO:0052731"}


id: GO:0043252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of organic anions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sodium-independent organic anion transport","secondary_identifiers":["Reactome:R-HSA-879518"],"termid":"GO:0043252"}


id: GO:1990872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of sterol import, by down regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:19793923","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sterol import by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1990872)","synonyms":[{"name":"negative regulation of sterol import by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"negative regulation of sterol import by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol import by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol influx by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of sterol uptake by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1990872"}


id: MOD:01134
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein labelling of peptide N-terminal using NHS ester","termid":"MOD:01134"}


id: GO:0031561
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of a growing fungal bud.","definition_xrefs":["PMID:9632790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"cellular bud tip","termid":"GO:0005934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"cellular bud tip polarisome","termid":"GO:0031561"}


id: PBO:0079724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding transcription factor","termid":"PBO:0079724"}


id: PBO:0003161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex delta subunit Cct4","termid":"PBO:0003161"}


id: GO:0060290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a differentiated cell of one fate into a differentiated cell of another fate without first undergoing cell division or reversion to a more primitive or stem cell-like fate.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transdifferentiation","secondary_identifiers":["Wikipedia:Transdifferentiation"],"termid":"GO:0060290"}


id: PBO:0029532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_septum","termid":"PBO:0029532"}


id: GO:0061113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of the pancreas. Morphogenesis is the process in which anatomical structures are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"pancreas development","termid":"GO:0031016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas morphogenesis","termid":"GO:0061113"}


id: PBO:0047300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM, ARH/RhoGEF and pleckstrin domain protein 2","termid":"PBO:0047300"}


id: PBO:0086833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function with similarity to helicases; located in the telomere region on the right arm of chromosome VIII","termid":"PBO:0086833"}


id: PBO:0085687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recovery from cell cycle arrest; acts in response to pheromone; also involved in regulation of intra-S DNA damage checkpoint and autophagy; is essential for dephosphorylation of Atg13p; interacts with Far3p, Far7p, Far8p, Far9p, Far10p and with the phosphatases Pph21p, Pph22p and Pph3p; has similarity to the N- and C-termini of N. crassa HAM-2; similar to human Fam40A and Fam40B","termid":"PBO:0085687"}


id: PBO:0051497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF21 antisense RNA 1","termid":"PBO:0051497"}


id: MONDO:0800367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 1LL","secondary_identifiers":["MEDGEN:815619","UMLS:C3809289"],"synonyms":[{"name":"CMD1LL","type":"exact"}],"termid":"MONDO:0800367","xrefs":{"Monarch":{"xref_id":"0800367"}}}


id: MONDO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atrial standstill (obsolete MONDO:0000195)","termid":"MONDO:0000195","xrefs":{"Monarch":{"xref_id":"0000195"}}}


id: MOD:00779
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant with MOD:00130. Remap to MOD:00130.","definition_xrefs":["PubMed:5529814","Unimod:352","PubMed:358196","DeltaMass:352","PubMed:11332453","PubMed:5337886"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00779 lysine oxidation to aminoadipic semialdehyde (obsolete MOD:00779)","synonyms":[{"name":"Oxidation of lysine (to aminoadipic semialdehyde)","type":"exact"}],"termid":"MOD:00779"}


id: GO:0035982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A developmental process that arises as an organism progresses toward the end of its lifespan that results in a decline in behavioral activities such as locomotory behavior, and learning or memory.","definition_xrefs":["PMID:20523893","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent behavioral decline (obsolete GO:0035982)","synonyms":[{"name":"age-dependent behavioural decline","type":"exact"},{"name":"age-related behavioral decline","type":"exact"},{"name":"behavioral aging","type":"exact"}],"termid":"GO:0035982"}


id: GO:0097553
data:
  {"annotated_genes":["SJAG_00296","SJAG_04668","SJAG_02877","SJAG_03631","SJAG_04551","SJAG_03850","SJAG_01090","SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66720,92163,114181,74206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[113107,90981],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[101898],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[108422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other into the cytosol by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"calcium ion transmembrane import into cytosol","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0060401"],"synonyms":[{"name":"calcium transmembrane import into cytosol","type":"broad"},{"name":"cytosolic calcium ion transport","type":"broad"}],"termid":"GO:0097553","terms_by_termid":{"GO:0061454":null,"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: PBO:0064336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase family member 5","termid":"PBO:0064336"}


id: FYPO:0009022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-isoleucine as the nitrogen source.","definition_xrefs":["PMID:34984977","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on isoleucine nitrogen source","synonyms":[{"name":"decreased growth on isoleucine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on isoleucine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with isoleucine nitrogen source","type":"related"},{"name":"reduced cell growth on isoleucine nitrogen source","type":"related"},{"name":"slow cell growth on isoleucine nitrogen source","type":"narrow"}],"termid":"FYPO:0009022"}


id: PBO:0065226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 7, synaptic","termid":"PBO:0065226"}


id: GO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which transitional stage B cells acquire the specialized features of mature B cells in the spleen.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature B cell differentiation","synonyms":[{"name":"mature B lymphocyte differentiation","type":"exact"},{"name":"mature B-cell differentiation","type":"exact"},{"name":"mature B-lymphocyte differentiation","type":"exact"},{"name":"mature cell development","type":"related"}],"termid":"GO:0002335"}


id: PBO:0063530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 1","termid":"PBO:0063530"}


id: PBO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase Cmk1","termid":"PBO:0001151"}


id: PBO:0084937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mu3-like subunit of the clathrin associated protein complex (AP-3); functions in transport of alkaline phosphatase to the vacuole via the alternate pathway","termid":"PBO:0084937"}


id: MONDO:0012508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that combines agammaglobulinemia with marked microcephaly, significant developmental delay, craniosynostosis, a severe dermatitis, cleft palate, narrowing of the choanae, and blepharophimosis. It has been described in three siblings, two males and one female, born to nonconsanguineous parents. Transmission is probably autosomal recessive. It has been suggested that this syndrome represents a new form of agammaglobulinemia due to a defect in early B-cell maturation.","definition_xrefs":["Orphanet:83617"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"congenital agammaglobulinemia","termid":"MONDO:0001902"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic agammaglobulinemia","termid":"MONDO:0016463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia-microcephaly-craniosynostosis-severe dermatitis syndrome","secondary_identifiers":["MESH:C538055","UMLS:C1864848","OMIM:610483","GARD:10011","MEDGEN:351236","SCTID:722281001"],"synonyms":[{"name":"agammaglobulinemia, microcephaly, and severe dermatitis","type":"related"}],"termid":"MONDO:0012508","xrefs":{"Monarch":{"xref_id":"0012508"}}}


id: PBO:0041833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 9","termid":"PBO:0041833"}


id: PBO:0083854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain RNA binding domains; mutations in the human ortholog, EXOSC2, cause SHRF (Short stature, Hearing loss, Retinitis pigmentosa and distinctive Facies) syndrome, an RNA exosomopathy","termid":"PBO:0083854"}


id: MONDO:0032576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0032576 (obsolete MONDO:0032576)","termid":"MONDO:0032576","xrefs":{"Monarch":{"xref_id":"0032576"}}}


id: PBO:0050502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC cluster antisense RNA 2","termid":"PBO:0050502"}


id: GO:0010315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of auxins from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:tair_curators","PMID:16990790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of auxin mediated signaling pathway","termid":"GO:0010928"},{"relation_name":"is_a","term_name":"auxin transport","termid":"GO:0060918"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"auxin export across the plasma membrane","synonyms":[{"name":"auxin efflux","type":"broad"},{"name":"auxin export","type":"broad"}],"termid":"GO:0010315"}


id: PBO:0001288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ras1","termid":"PBO:0001288"}


id: PBO:0063994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 28","termid":"PBO:0063994"}


id: GO:1900101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endoplasmic reticulum unfolded protein response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"regulates","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum unfolded protein response","synonyms":[{"name":"regulation of ER unfolded protein response","type":"exact"},{"name":"regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"regulation of erUPR","type":"exact"}],"termid":"GO:1900101"}


id: PBO:0090987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg2","termid":"PBO:0090987"}


id: PBO:0070158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 72 pseudogene","termid":"PBO:0070158"}


id: PBO:0046880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A5, pseudogene","termid":"PBO:0046880"}


id: PBO:0029289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delaminated_cell_wall_during_G0","termid":"PBO:0029289"}


id: MONDO:1012407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acral mutilation syndrome, non-human animal","termid":"MONDO:1011884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acral mutilation syndrome, dog","secondary_identifiers":["OMIA:001514-9615"],"termid":"MONDO:1012407","xrefs":{"Monarch":{"xref_id":"1012407"}}}


id: MONDO:0100196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myopathy of the musculoskeletal system that covers a wide spectrum of phenotypes and is caused by pathogenic variants in the skeletal muscle beta-Tropomyosin gene. These variants lead to a variety of overlapping adult onset and congenital myopathies characterized by muscle weakness, amyotrophy, hypotonia, myopathic facies, scoliosis, and sometimes contractures among other phenotypes. Histologic findings on skeletal muscle biopsy are variable with nemaline and intranuclear bodies, cap-like lesions, core-like lesions, fiber-type disproportion, and dystrophic features all observed to some degree.","definition_xrefs":["PMID:23413262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of tropomyosin","termid":"MONDO:0017303"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"TPM2-related myopathy","synonyms":[{"name":"TPM2 myopathy","type":"exact"},{"name":"TPM2-related myopathy","type":"exact"},{"name":"autosomal dominant TPM2-related myopathy","type":"exact"},{"name":"congenital myopathy related to TPM2","type":"exact"}],"termid":"MONDO:0100196","xrefs":{"Monarch":{"xref_id":"0100196"}}}


id: PBO:0087624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, essential protein that is required for the assembly of actin and tubulins in vivo; contains an ATP-binding motif","termid":"PBO:0087624"}


id: MONDO:1012733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome that occurs in cattle with absence of dermatan sulfate proteoglycan.","definition_xrefs":["OMIA:001716-9913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome with absence of dermatan sulfate proteoglycan, cattle","termid":"MONDO:1012733","xrefs":{"Monarch":{"xref_id":"1012733"}}}


id: GO:0141117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont prevents the activation of host complement by binding a soluble complement control protein (CCP) of the host and recruiting it to the microbe surface. The normal role of CCPs is to prevent complement activation on 'self' cellular targets. When soluble CCPs are recuited to the surface of a microbe, the complement fails to activate.","definition_xrefs":["PMID:24129254","PMID:27304426","PMID:17513779","PMID:22540535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by recruitment of complement control protein","synonyms":[{"name":"suppression of complement activation by another organism by recruitment of complement control protein","type":"broad"},{"name":"suppression of complement activation by another organism by recuitement of complement control protein","type":"exact"}],"termid":"GO:0141117"}


id: GO:0090502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA phosphodiester bond hydrolysis, endonucleolytic (obsolete GO:0090502)","termid":"GO:0090502"}


id: PBO:0041555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 38","termid":"PBO:0041555"}


id: PBO:0035797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_acetylation_during_vegetative_growth","termid":"PBO:0035797"}


id: PBO:0061010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"niban apoptosis regulator 3","termid":"PBO:0061010"}


id: SO:0000981
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription terminator that is dependent upon Rho.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_terminator","termid":"SO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho_dependent_bacterial_terminator","synonyms":[{"name":"rho dependent bacterial terminator","type":"exact"}],"termid":"SO:0000981"}


id: MONDO:0015388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyrrhinia is an extremely rare, major congenital malformation characterized by complete duplication of the nose resulting in twofully developed noses often associated with choanal atresia, causing respiratory distress and necessitating surgical repair.","definition_xrefs":["Orphanet:141091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyrrhinia","secondary_identifiers":["UMLS:C4274730","SCTID:716279002","GARD:19945","icd11.foundation:142812177","MEDGEN:894825"],"synonyms":[{"name":"Double nose","type":"exact"},{"name":"Polyrhinia","type":"exact"}],"termid":"MONDO:0015388","xrefs":{"Monarch":{"xref_id":"0015388"}}}


id: GO:1902070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sphingolipid signaling.","definition_xrefs":["GOC:TermGenie","PMID:20870412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of sphingolipid mediated signaling pathway","termid":"GO:1902068"},{"relation_name":"positively_regulates","term_name":"sphingolipid mediated signaling pathway","termid":"GO:0090520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of sphingolipid mediated signaling pathway","synonyms":[{"name":"activation of sphingolipid mediated signaling pathway","type":"narrow"},{"name":"activation of sphingolipid signaling pathway","type":"related"},{"name":"positive regulation of sphingolipid signaling pathway","type":"related"},{"name":"up regulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"up regulation of sphingolipid signaling pathway","type":"related"},{"name":"up-regulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"up-regulation of sphingolipid signaling pathway","type":"related"},{"name":"upregulation of sphingolipid mediated signaling pathway","type":"exact"},{"name":"upregulation of sphingolipid signaling pathway","type":"related"}],"termid":"GO:1902070"}


id: PBO:0073694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 6","termid":"PBO:0073694"}


id: GO:0010452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 36 of the histone.","definition_xrefs":["GOC:tb","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K36 methylation (obsolete GO:0010452)","synonyms":[{"name":"histone H3 K36 methylation","type":"exact"},{"name":"histone H3K36me","type":"exact"},{"name":"histone lysine H3 K36 methylation","type":"exact"}],"termid":"GO:0010452"}


id: PBO:0043608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper metabolism domain containing 1","termid":"PBO:0043608"}


id: MONDO:0000358
data:
  {"annotated_genes":["SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013378"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03843":null},"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:119530","DOID:0050567","MEDGEN:472000","SCTID:449790007","UMLS:C3266076"],"termid":"MONDO:0000358","terms_by_termid":{"MONDO:0013378":null},"xrefs":{"Monarch":{"xref_id":"0000358"}}}


id: PR:Q9UTD1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yth1 gene.","definition_xrefs":["UniProtKB:Q9UTD1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA 3'-end-processing protein yth1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.08c","synonyms":[{"name":"Spom972h-yth1","type":"exact"}],"termid":"PR:Q9UTD1"}


id: PBO:0078419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-5","termid":"PBO:0078419"}


id: PBO:0066739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 36","termid":"PBO:0066739"}


id: MONDO:0002966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prolymphocytic leukemia that involves the spleen.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolymphocytic leukemia","termid":"MONDO:0001023"},{"relation_name":"is_a","term_name":"splenic manifestation of leukemia","termid":"MONDO:0004107"},{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"splenic manifestation of prolymphocytic leukemia","secondary_identifiers":["NCIT:C7297","UMLS:C1336066","DOID:4334","MEDGEN:277663"],"synonyms":[{"name":"prolymphocytic leukaemia of spleen","type":"exact"},{"name":"prolymphocytic leukemia of spleen","type":"exact"},{"name":"spleen prolymphocytic leukaemia","type":"exact"},{"name":"spleen prolymphocytic leukemia","type":"exact"},{"name":"splenic manifestation of prolymphocytic leukemia","type":"exact"}],"termid":"MONDO:0002966","xrefs":{"Monarch":{"xref_id":"0002966"}}}


id: PBO:0012314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGG1 interacting factor 3 family, implicated in transcription","termid":"PBO:0012314"}


id: MONDO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diarrhea that results from the presence of osmotically active, poorly absorbed solutes in the bowel lumen that inhibit normal water and electrolyte absorption.","direct_ancestors":[{"relation_name":"is_a","term_name":"non-infectious diarrheal disease","termid":"MONDO:0045030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"osmotic diarrheal disease","secondary_identifiers":["SCTID:2946003","MEDGEN:540779","UMLS:C0267556","DOID:0050130"],"synonyms":[{"name":"osmotic diarrhea","type":"exact"},{"name":"osmotic diarrhoea","type":"exact"},{"name":"permeability diarrhea","type":"exact"},{"name":"permeability diarrhoea","type":"exact"}],"termid":"MONDO:0000250","xrefs":{"Monarch":{"xref_id":"0000250"}}}


id: MONDO:1010603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, domestic cat","secondary_identifiers":["OMIA:000536-9685"],"termid":"MONDO:1010603","xrefs":{"Monarch":{"xref_id":"1010603"}}}


id: MONDO:0045036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of an infectious disease in which the disease affects an immunologically normal host.","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease characteristic","termid":"MONDO:0045034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary infectious","termid":"MONDO:0045036","xrefs":{"Monarch":{"xref_id":"0045036"}}}


id: GO:0050072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-methylguanosine 5'-triphospho-5'-polynucleotide + H2O = 7-methylguanosine 5'-phosphate + polynucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete m7G(5')pppN diphosphatase activity (obsolete GO:0050072)","synonyms":[{"name":"M(7)G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:0050072"}


id: FYPO:0004359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic cell cycle DNA replication checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah","GO:0033314","PMID:11988741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0004359"}


id: PBO:0091317
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana AtSGP2","termid":"PBO:0091317"}


id: PATO:0000465
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000465 marked (obsolete PATO:0000465)","termid":"PATO:0000465"}


id: GO:0120092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Acetyl-CoA + [protein]-L-lysine = CoA + [protein]-N(6)-acetyl-L-lysine.","definition_xrefs":["PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"crotonyl-CoA hydratase activity","secondary_identifiers":["RHEA:45584"],"termid":"GO:0120092"}


id: PBO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX17 pseudogene 1","termid":"PBO:0043768"}


id: PBO:0058682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6810","termid":"PBO:0058682"}


id: MONDO:0004253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign breast neoplasm characterized by the proliferation of multiple papillomas within the lumen of the ducts.","definition_xrefs":["NCIT:C5201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal papillomatosis","termid":"MONDO:0021099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal breast papillomatosis","secondary_identifiers":["DOID:7511","MEDGEN:235224","UMLS:C1334247"],"synonyms":[{"name":"breast intraductal papillomatosis","type":"related"},{"name":"intraductal breast papillomatosis","type":"exact"},{"name":"intraductal papillomatosis of breast","type":"exact"},{"name":"intraductal papillomatosis of the breast","type":"exact"}],"termid":"MONDO:0004253","xrefs":{"Monarch":{"xref_id":"0004253"}}}


id: GO:1902352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["PMID:23223039","GOC:rn","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1902352)","termid":"GO:1902352"}


id: GO:1902841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:24004945","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of netrin-activated signaling pathway","synonyms":[{"name":"regulation of netrin signaling pathway","type":"exact"},{"name":"regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"regulation of netrin-activated signalling pathway","type":"exact"},{"name":"regulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902841"}


id: MOD:01881
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-valine residue by a free radical process effectively releasing a hydrogen molecule and forming 3-(L-phenylalan-2'-yl)-L-valine.","definition_xrefs":["RESID:AA0565","PubMed:21596985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(L-phenylalan-2'-yl)-L-valine","synonyms":[{"name":"(2S)-2-amino-4-(2-[(2S)-2-amino-2-carboxyethyl]phenyl)-3-methylbutanoic acid","type":"exact"},{"name":"3-(L-phenylalan-2'-yl)-L-valine","type":"exact"},{"name":"symerythrin valine-phenylalanine cross-link","type":"exact"}],"termid":"MOD:01881"}


id: GO:0010067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the primary vascular tissue.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"procambium histogenesis","termid":"GO:0010067"}


id: MONDO:0017510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adactyly of foot","termid":"MONDO:0018563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"adactyly of foot, bilateral","secondary_identifiers":["UMLS:C5395377","Orphanet:295118","MEDGEN:1718340"],"synonyms":[{"name":"congenital absence of toes, bilateral","type":"exact"}],"termid":"MONDO:0017510","xrefs":{"Monarch":{"xref_id":"0017510"}}}


id: MONDO:0016979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MRCS syndrome is a rare, genetic retinal dystrophy disorder characterized by bilateral microcornea, rod-cone dystrophy, cataracts and posterior staphyloma, in the absence of other systemic features. Night blindness is typically the presenting manifestation and nystagmus, strabismus, astigmatism and angle closure glaucoma may be associated findings. Progressive visual acuity deterioration, due to pulverulent-like cataracts, results in poor vision ranging from no light perception to 20/400.","definition_xrefs":["Orphanet:263347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"MRCS syndrome","secondary_identifiers":["GARD:17255","icd11.foundation:392681472","MEDGEN:1666962","UMLS:C4749856"],"synonyms":[{"name":"microcornea-rod-cone dystrophy-cataract-posterior staphyloma syndrome","type":"exact"}],"termid":"MONDO:0016979","xrefs":{"Monarch":{"xref_id":"0016979"}}}


id: GO:0036451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the 2'-O-ribose of the first or second transcribed nucleotide of a 5'-capped mRNA.","definition_xrefs":["GOC:bf","PMID:20713356"],"gene_count":0,"genotype_count":0,"name":"obsolete cap mRNA methylation (obsolete GO:0036451)","termid":"GO:0036451"}


id: PBO:0029516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_population_with_abnormal_cell_shape_(obsolete_FYPO:0002198)","termid":"PBO:0029516"}


id: PBO:0054735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2144","termid":"PBO:0054735"}


id: GO:0071223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoteichoic acid stimulus; lipoteichoic acid is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipoteichoic acid","termid":"GO:0070391"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipoteichoic acid","synonyms":[{"name":"cellular response to LTA","type":"exact"}],"termid":"GO:0071223"}


id: MONDO:0037735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the sebaceous gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"sebaceous gland neoplasm","termid":"MONDO:0006963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"sebaceous gland cancer","secondary_identifiers":["UMLS:C1382026","MEDGEN:235134","NCIT:C8409"],"synonyms":[{"name":"cancer of sebaceous gland","type":"exact"},{"name":"malignant neoplasm of sebaceous gland","type":"exact"},{"name":"malignant neoplasm of the sebaceous gland","type":"exact"},{"name":"malignant sebaceous gland neoplasm","type":"exact"},{"name":"malignant sebaceous gland tumor","type":"exact"},{"name":"malignant sebaceous gland tumour","type":"exact"},{"name":"malignant sebaceous neoplasm","type":"exact"},{"name":"malignant sebaceous tumor","type":"exact"},{"name":"malignant sebaceous tumour","type":"exact"},{"name":"malignant tumor of sebaceous gland","type":"exact"},{"name":"malignant tumor of the sebaceous gland","type":"exact"},{"name":"malignant tumour of sebaceous gland","type":"exact"},{"name":"malignant tumour of the sebaceous gland","type":"exact"}],"termid":"MONDO:0037735","xrefs":{"Monarch":{"xref_id":"0037735"}}}


id: PR:O13900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap114 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap114 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.09c","synonyms":[{"name":"Spom972h-sap114","type":"exact"},{"name":"spliceosome-associated protein 145 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13900"}


id: GO:0051733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NTP + 5'-dephospho-DNA = NDP + 5'-phospho-DNA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete polydeoxyribonucleotide kinase activity (obsolete GO:0051733)","synonyms":[{"name":"DNA 5'-hydroxyl kinase activity","type":"exact"},{"name":"DNA kinase activity","type":"exact"}],"termid":"GO:0051733"}


id: PBO:0086794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YAL037W has a paralog, YOR342C, that arose from the whole genome duplication","termid":"PBO:0086794"}


id: GO:0008717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanyl-D-alanine endopeptidase activity (obsolete GO:0008717)","synonyms":[{"name":"D-alanyl-D-alanine endopeptidase activity","type":"exact"},{"name":"penicillin-binding protein 7","type":"narrow"},{"name":"penicillin-binding protein 8","type":"narrow"}],"termid":"GO:0008717"}


id: GO:0072082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the kidney nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of proximal tubule identity","termid":"GO:0072082"}


id: PBO:0041467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 143","termid":"PBO:0041467"}


id: PBO:0090358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane hexose transmembrane transporter Ght7","termid":"PBO:0090358"}


id: GO:0031273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly of pseudopodia.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pseudopodium assembly","termid":"GO:0031272"},{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"negatively_regulates","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pseudopodium assembly","synonyms":[{"name":"down regulation of pseudopodium formation","type":"related"},{"name":"down-regulation of pseudopodium formation","type":"related"},{"name":"downregulation of pseudopodium formation","type":"related"},{"name":"inhibition of pseudopodium formation","type":"narrow"},{"name":"negative regulation of pseudopodium formation","type":"related"}],"termid":"GO:0031273"}


id: MONDO:0009789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonarteritic anterior ischemic optic neuropathy, susceptibility to","secondary_identifiers":["MEDGEN:338294","UMLS:C1847711","OMIM:258660"],"synonyms":[{"name":"Naion, susceptibility to","type":"related"},{"name":"nonarteritic anterior ischemic optic neuropathy, susceptibility to","type":"exact"},{"name":"optic neuropathy, anterior ischemic, susceptibility to","type":"related"},{"name":"susceptibility to nonarteritic anterior ischaemic optic neuropathy","type":"related"},{"name":"susceptibility to nonarteritic anterior ischemic optic neuropathy","type":"related"}],"termid":"MONDO:0009789","xrefs":{"Monarch":{"xref_id":"0009789"}}}


id: PBO:0058304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4678","termid":"PBO:0058304"}


id: MONDO:1010511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in golden hamsters in which the cause of the disease is a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"cardiomyopathy, golden hamster","termid":"MONDO:1010437"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, SGCD-related, golden hamster","secondary_identifiers":["OMIA:002211-10036"],"termid":"MONDO:1010511","xrefs":{"Monarch":{"xref_id":"1010511"}}}


id: PBO:0040188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 1","termid":"PBO:0040188"}


id: GO:0039678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope. Occurs in non-enveloped prokaryotic viruses. Caudovirales carry an ejection apparatus that can be long and contractile, long and noncontractile, or short, and is able to penetrate the host cell envelope to deliver the viral genome into the host cell cytoplasm.","definition_xrefs":["PMID:23385786","VZ:986","GOC:ch","PMID:31663016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope","synonyms":[{"name":"phage genome ejection","type":"narrow"},{"name":"viral genome ejection through host cell envelope","type":"related"},{"name":"viral genome injection through bacterial membranes","type":"narrow"}],"termid":"GO:0039678"}


id: PBO:0079604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2F pseudogene 1","termid":"PBO:0079604"}


id: GO:0033921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->3)-alpha-D-galactosidic linkages in Aerobacter aerogenes capsular polysaccharide.","definition_xrefs":["EC:3.2.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"capsular-polysaccharide endo-1,3-alpha-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.87-RXN"],"synonyms":[{"name":"aerobacter-capsular-polysaccharide galactohydrolase activity","type":"related"},{"name":"capsular polysaccharide galactohydrolase activity","type":"related"},{"name":"polysaccharide depolymerase activity","type":"related"}],"termid":"GO:0033921"}


id: PBO:0036434
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Counteracter of CENP-A loading Protein","termid":"PBO:0036434"}


id: GO:0000104
data:
  {"annotated_genes":["SJAG_00260","SJAG_00203","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[75805,66176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor.","definition_xrefs":["RHEA:16357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00203":null,"SJAG_00260":null,"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"succinate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00412","GO:0019739"],"synonyms":[{"name":"fumarate dehydrogenase activity","type":"exact"},{"name":"fumarate reductase activity","type":"exact"},{"name":"fumaric hydrogenase activity","type":"related"},{"name":"succinate oxidoreductase activity","type":"exact"},{"name":"succinic acid dehydrogenase activity","type":"exact"},{"name":"succinic dehydrogenase activity","type":"broad"},{"name":"succinodehydrogenase activity","type":"exact"},{"name":"succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:0000104","terms_by_termid":{"GO:0008177":null,"GO:0016156":null}}


id: PBO:0052280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 6B","termid":"PBO:0052280"}


id: PBO:0087306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and WD-repeat protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; also required for meiotic double-strand break recombination; null mutants have superkiller phenotype","termid":"PBO:0087306"}


id: MONDO:0014431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal obesity-metabolic syndrome","termid":"MONDO:0000816"},{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"LIPE-related familial partial lipodystrophy","secondary_identifiers":["DOID:0070206","UMLS:C4014869","MEDGEN:863306","GARD:13126","OMIM:615980","Orphanet:435660"],"synonyms":[{"name":"FPLD6","type":"exact"},{"name":"LIPE-related FPLD","type":"exact"},{"name":"familial partial lipodystrophy associated with LIPE mutations","type":"exact"},{"name":"familial partial lipodystrophy type 6","type":"related"},{"name":"lipodystrophy, familial partial, associated with Lipe mutations","type":"related"},{"name":"lipodystrophy, familial partial, type 6","type":"related"}],"termid":"MONDO:0014431","xrefs":{"Monarch":{"xref_id":"0014431"}}}


id: PBO:0017462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part_that_occurs_in","termid":"PBO:0017462"}


id: PBO:0079206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressing subtransferable candidate 2 (pseudogene)","termid":"PBO:0079206"}


id: MONDO:0017435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, autosomal dominant inherited syndrome caused by mutations in the IRF6 gene. It is characterized by the presence of cleft palate, cleft lip, pits in the lower lip, web behind the knee (popliteal pterygium), syndactyly, cryptorchidism, scrotal malformation, and hypoplasia of the labia majora.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"arthrogryposis syndrome","termid":"MONDO:0015225"},{"relation_name":"is_a","term_name":"IRF6-related condition","termid":"MONDO:1040010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popliteal pterygium syndrome","secondary_identifiers":["UMLS:C0265259","NCIT:C118786","ICD9:756.89","MEDGEN:78543","icd11.foundation:543218573","MESH:C562509","GARD:21189","Orphanet:294963","SCTID:66783006","DOID:0060055"],"synonyms":[{"name":"PPS","type":"exact"},{"name":"facio-genito-popliteal syndrome","type":"exact"}],"termid":"MONDO:0017435","xrefs":{"Monarch":{"xref_id":"0017435"}}}


id: PBO:0045735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0045735"}


id: SO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A C-terminal tetrapeptide motif that mediates retention of a protein in (or retrieval to) the endoplasmic reticulum. In mammals the sequence is KDEL, and in fungi HDEL or DDEL.","definition_xrefs":["doi:10.1093/jxb/50.331.157","PMID:2077689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"ER_retention_signal","synonyms":[{"name":"ER retention signal","type":"exact"},{"name":"endoplasmic reticulum retention signal","type":"exact"}],"termid":"SO:0001806"}


id: GO:0005921
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction composed of pannexins or innexins and connexins, two different families of channel-forming proteins.","definition_xrefs":["ISBN:0815332181","GOC:mtg_muscle","PMID:22366062","GOC:mah","Wikipedia:Gap_junction"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gap junction","secondary_identifiers":["NIF_Subcellular:sao118541872"],"synonyms":[{"name":"communicating junction","type":"exact"},{"name":"electrical synapse","type":"related"},{"name":"electrotonic synapse","type":"related"},{"name":"gap junction macula","type":"exact"},{"name":"gap junction plaque","type":"exact"},{"name":"intercellular gap junction channel","type":"related"},{"name":"macula communicans","type":"exact"},{"name":"zonula communicans","type":"exact"}],"termid":"GO:0005921"}


id: GO:0060148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the inactivation of gene expression by a posttranscriptional mechanism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing","termid":"GO:0060147"},{"relation_name":"positively_regulates","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of post-transcriptional gene silencing","synonyms":[{"name":"positive regulation of posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0060148"}


id: FYPO:0001040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of thiamine diphosphokinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal thiamine diphosphokinase activity","termid":"FYPO:0001039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased thiamine diphosphokinase activity","synonyms":[{"name":"reduced thiamine diphosphokinase activity","type":"exact"}],"termid":"FYPO:0001040"}


id: GO:0102912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (-)-lactol + NAD = H+ + (-)-matairesinol + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-lactol dehydrogenase activity (obsolete GO:0102912)","termid":"GO:0102912"}


id: GO:1990711
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex that inhibits binding of Tcf to beta-catenin while preserving interaction of catenin with cadherin thus inhibiting transcription mediated by beta-catenin-Tcf complex.","definition_xrefs":["GOC:bhm","PMID:12408824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"beta-catenin-ICAT complex","synonyms":[{"name":"CTNNB1-CTNNBIP1 complex","type":"exact"}],"termid":"GO:1990711"}


id: GO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin assembly complex (obsolete GO:0005678)","synonyms":[{"name":"chromatin assembly complex","type":"exact"},{"name":"nucleosome assembly complex","type":"narrow"}],"termid":"GO:0005678"}


id: PATO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer with some kind of aperture or opening that is blocked or clogged.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congested","termid":"PATO:0001836"}


id: PBO:0043760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10","termid":"PBO:0043760"}


id: MONDO:0001090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of anterolateral myocardial infarction.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myocardial infarction","termid":"MONDO:0004781"},{"relation_name":"is_a","term_name":"anterolateral myocardial infarction","termid":"MONDO:0006652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute anterolateral myocardial infarction","secondary_identifiers":["ICD9:410.0","SCTID:70211005","MEDGEN:510040","ICD9:410.02","UMLS:C0155627","ICD9:410.01","ICD9:410.00","DOID:10651"],"synonyms":[{"name":"acute anterolateral myocardial infarction","type":"exact"},{"name":"acute myocardial infarction of anterolateral wall","type":"exact"},{"name":"anterolateral myocardial infarction, acute","type":"exact"}],"termid":"MONDO:0001090","xrefs":{"Monarch":{"xref_id":"0001090"}}}


id: GO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus using host microtubules.","definition_xrefs":["VZ:983","UniProtKB-KW:KW-1177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-dependent intracellular transport of viral material","termid":"GO:0075519"},{"relation_name":"is_a","term_name":"transport of viral material towards nucleus","termid":"GO:0075606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-dependent intracellular transport of viral material towards nucleus","synonyms":[{"name":"microtubule-dependent intracellular transport of viral material to nucleus","type":"exact"}],"termid":"GO:0075521"}


id: PBO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIM1 family serine/threonine protein kinase Cdr1/Nim1","termid":"PBO:0001672"}


id: GO:0032717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-8 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-8 production","termid":"GO:0032677"},{"relation_name":"negatively_regulates","term_name":"interleukin-8 production","termid":"GO:0032637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-8 production","secondary_identifiers":["GO:0045415","GO:2000483"],"synonyms":[{"name":"down regulation of interleukin-8 production","type":"exact"},{"name":"down-regulation of interleukin-8 production","type":"exact"},{"name":"downregulation of interleukin-8 production","type":"exact"},{"name":"inhibition of interleukin-8 production","type":"narrow"},{"name":"negative regulation of IL-8 production","type":"exact"},{"name":"negative regulation of interleukin-8 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-8 secretion","type":"narrow"}],"termid":"GO:0032717"}


id: SO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ds_RNA_viral_sequence is a viral_sequence that is the sequence of a virus that exists as double stranded RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_RNA_viral_sequence","synonyms":[{"name":"double stranded RNA virus sequence","type":"exact"},{"name":"ds RNA viral sequence","type":"exact"}],"termid":"SO:0001169"}


id: SO:0001478
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter trap construct is a type of engineered plasmid which is designed to integrate into a genome and express a reporter when inserted in close proximity to a promoter element. Promoter traps typically do not contain promoter elements and are mutagenic.","definition_xrefs":["ZFIN:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"engineered_plasmid","termid":"SO:0000637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_trap_construct","synonyms":[{"name":"promoter trap construct","type":"exact"}],"termid":"SO:0001478"}


id: GO:0140271
data:
  {"annotated_genes":["SJAG_00057","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[110396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"}]},"cv_name":"biological_process","definition":"The directed movement of hexose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"},{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"hexose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140271","terms_by_termid":{"GO:0098708":null,"GO:0140425":null}}


id: PR:O13905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.14c gene.","definition_xrefs":["UniProtKB:O13905","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain-containing protein C22A12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.14c","synonyms":[{"name":"Spom972h-SPAC22A12.14c","type":"exact"}],"termid":"PR:O13905"}


id: PBO:0080824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylosyltransferase 2","termid":"PBO:0080824"}


id: PBO:0052837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-2","termid":"PBO:0052837"}


id: FYPO:0002084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell has a larger volume and cell diameter, but shorter cell length, than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"swollen stubby vegetative cell","synonyms":[{"name":"enlarged stubby cell","type":"related"},{"name":"large stubby cell","type":"related"},{"name":"stubby cell with increased cell size","type":"related"},{"name":"stubby cell with increased cell volume","type":"exact"},{"name":"swollen watermelon-shaped cell","type":"exact"}],"termid":"FYPO:0002084"}


id: PBO:0015707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated ATP-dependent RNA helicase Prp28 (predicted)","termid":"PBO:0015707"}


id: PBO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC domain protein","termid":"PBO:0002326"}


id: PBO:0088129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein involved with Npc2p in sterol trafficking; transits through the biosynthetic vacuolar protein sorting pathway, involved in sphingolipid metabolism; cells lacking Ncr1p exhibit high levels of long chain bases (LCB), similar to the accumulation of high amounts of lipids observed in patients with Neimann-Pick C, a disease caused by loss-of-function mutations in NPC1, the functional ortholog of Ncr1p","termid":"PBO:0088129"}


id: PBO:0072062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11","termid":"PBO:0072062"}


id: GO:0085044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host organism cuticle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cuticle","synonyms":[{"name":"catabolism of host cuticle","type":"exact"},{"name":"degradation of host cuticle","type":"related"},{"name":"disassembly by symbiont of host cuticle","type":"related"}],"termid":"GO:0085044"}


id: FYPO:0003357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to filipin. Cells stop growing (and may die) at a concentration of filipin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to filipin","synonyms":[{"name":"hypersensitive to filipin","type":"exact"},{"name":"sensitive to filipin during mitotic cell cycle","type":"related"},{"name":"sensitive to filipin during vegetative growth","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids","type":"broad"}],"termid":"FYPO:0003357"}


id: GO:0070977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for bone to attain its fully functional state.","definition_xrefs":["GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone maturation","termid":"GO:0070977"}


id: GO:0046656
data:
  {"annotated_genes":["SJAG_04156","SJAG_01126","SJAG_00815","SJAG_03275","SJAG_02408","SJAG_02225","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57114,60606,68745,104546,105843,108100,112160],"is_not":false,"summary":null,"term":"GO:0046656"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of folic acid, pteroylglutamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"folic acid metabolic process","termid":"GO:0046655"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0042559","GO:0008150"],"is_obsolete":false,"name":"folic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Folic_acid"],"synonyms":[{"name":"folate biosynthesis","type":"exact"},{"name":"folate biosynthetic process","type":"exact"},{"name":"folic acid anabolism","type":"exact"},{"name":"folic acid biosynthesis","type":"exact"},{"name":"folic acid formation","type":"exact"},{"name":"folic acid synthesis","type":"exact"},{"name":"vitamin B9 biosynthesis","type":"exact"},{"name":"vitamin B9 biosynthetic process","type":"exact"},{"name":"vitamin M biosynthesis","type":"exact"},{"name":"vitamin M biosynthetic process","type":"exact"}],"termid":"GO:0046656","terms_by_termid":{"GO:0046656":null}}


id: PBO:0028316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_wtf-derived_RNA_level","termid":"PBO:0028316"}


id: GO:0043158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process by which a cell becomes a heterocyst, a cell that carries out nitrogen fixation. This process involves changes to the cell wall, expression of nitrogenase and other proteins involved in nitrogen fixation, and degradation of photosystem II, which produces oxygen. This process is known to occur in some cyanobacteria.","definition_xrefs":["PMID:11121783","PMID:35744626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heterocyst development","synonyms":[{"name":"heterocyst cell differentiation","type":"related"},{"name":"heterocyst differentiation","type":"related"},{"name":"heterocyst formation","type":"exact"}],"termid":"GO:0043158"}


id: MONDO:0005049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Bleeding within the cranium.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete intracranial hemorrhage (obsolete MONDO:0005049)","secondary_identifiers":["MESH:D020300","ICD9:432.9","NCIT:C34463","SCTID:105629000"],"termid":"MONDO:0005049","xrefs":{"Monarch":{"xref_id":"0005049"}}}


id: PBO:0071319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 3","termid":"PBO:0071319"}


id: PBO:0069532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 801, pseudogene","termid":"PBO:0069532"}


id: PBO:0027144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027144"}


id: PBO:0031519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_damage_checkpoint_override_in_response_to_caffeine","termid":"PBO:0031519"}


id: MONDO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A infectious disease involving the Bacteria.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial infectious disease (obsolete MONDO:0001026)","synonyms":[{"name":"Bacteria infection","type":"exact"},{"name":"infections, Bacteria","type":"related"}],"termid":"MONDO:0001026","xrefs":{"Monarch":{"xref_id":"0001026"}}}


id: GO:0002755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A toll-like receptor signaling pathway in which the MyD88 adaptor molecule mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:15585605","GOC:add","PMID:12467241","PMID:12855817","PMID:12524386","ISBN:0781735149","PMID:15728447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"MyD88-dependent toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-166058","Reactome:R-HSA-975871"],"synonyms":[{"name":"MyD88-dependent TLR signaling pathway","type":"exact"},{"name":"MyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002755"}


id: GO:0030281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of cutaneous epidermal structures such as hairs, scales, or feathers.","definition_xrefs":["ISBN:0878932437","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of cutaneous appendage","termid":"GO:0030281"}


id: PBO:0073329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 5","termid":"PBO:0073329"}


id: GO:0141105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupts a toll-like receptor signaling pathway in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17299722","PMID:18327267","PMID:15944308"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression of host toll-like receptor signal transduction (obsolete GO:0141105)","synonyms":[{"name":"symbiont-mediated disruption of host toll-like receptor signaling pathway","type":"exact"},{"name":"symbiont-mediated suppression of host toll-like receptor signal transduction","type":"related"},{"name":"symbiont-mediated suppression of host toll-like receptor signaling pathway","type":"exact"}],"termid":"GO:0141105"}


id: PBO:0044373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYLD lysine 63 deubiquitinase","termid":"PBO:0044373"}


id: PBO:0074540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synuclein beta","termid":"PBO:0074540"}


id: PBO:0073057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 domain containing 1","termid":"PBO:0073057"}


id: GO:0045910
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA recombination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"negatively_regulates","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA recombination","type":"exact"},{"name":"down-regulation of DNA recombination","type":"exact"},{"name":"downregulation of DNA recombination","type":"exact"},{"name":"inhibition of DNA recombination","type":"narrow"}],"termid":"GO:0045910","terms_by_termid":{"GO:0045128":null}}


id: PBO:0075105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 154","termid":"PBO:0075105"}


id: RO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component","termid":"RO:0002180"}


id: PBO:0069640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 917, pseudogene","termid":"PBO:0069640"}


id: GO:0008164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete organophosphorus resistance (obsolete GO:0008164)","synonyms":[{"name":"organophosphorus resistance","type":"exact"}],"termid":"GO:0008164"}


id: MONDO:0013365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 9p23-p21.2.","definition_xrefs":["DOID:0110528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 83","secondary_identifiers":["OMIM:613685","MEDGEN:854856","GARD:22637","UMLS:C3888310"],"synonyms":[{"name":"DFNB83","type":"narrow"},{"name":"autosomal recessive deafness 83","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 83","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 83","type":"narrow"},{"name":"deafness, autosomal recessive 83","type":"narrow"}],"termid":"MONDO:0013365","xrefs":{"Monarch":{"xref_id":"0013365"}}}


id: GO:0060429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium development","termid":"GO:0060429"}


id: GO:0170009
data:
  {"annotated_genes":["SJAG_03416","SJAG_04991","SJAG_04370","SJAG_03710","SJAG_01305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140506"},{"annotations":[90669,107278,107404,105613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140474"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together two membranes, either via membrane lipid binding or by interacting with a membrane protein, to establish or maintain membrane contact sites and mediate organelle exchange and communication.","definition_xrefs":["PMID:29858488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null,"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"endoplasmic reticulum-organelle membrane tether activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170009","terms_by_termid":{"GO:0140474":null,"GO:0140506":null}}


id: PBO:0041406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 132","termid":"PBO:0041406"}


id: FYPO:0001261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitotic cytokinesis is decreased during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cytokinesis","termid":"FYPO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000032","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytokinesis during cellular hyperosmotic response","synonyms":[{"name":"decreased cytokinesis during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"decreased cytokinesis during cellular hyperosmotic response during vegetative growth","type":"exact"},{"name":"decreased mitotic cytokinesis during cellular hyperosmotic response","type":"exact"},{"name":"reduced cytokinesis during cellular hyperosmotic response","type":"exact"}],"termid":"FYPO:0001261"}


id: MONDO:0045029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Deuteromycetes infectious disease (obsolete MONDO:0045029)","secondary_identifiers":["SCTID:59258008"],"synonyms":[{"name":"infection by Deuteromycetes","type":"exact"},{"name":"infection caused by Deuteromycetes","type":"related"}],"termid":"MONDO:0045029","xrefs":{"Monarch":{"xref_id":"0045029"}}}


id: GO:1900125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hyaluronan biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"regulates","term_name":"hyaluronan biosynthetic process","termid":"GO:0030213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of hyaluronan biosynthetic process","synonyms":[{"name":"regulation of hyaluronan anabolism","type":"exact"},{"name":"regulation of hyaluronan biosynthesis","type":"exact"},{"name":"regulation of hyaluronan formation","type":"exact"},{"name":"regulation of hyaluronan synthesis","type":"exact"}],"termid":"GO:1900125"}


id: GO:0021680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebellar cortex development","termid":"GO:0021695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer development","termid":"GO:0021680"}


id: PR:O94549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1322.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0619 GPI-anchored membrane protein C1322.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.10","synonyms":[{"name":"Spom972h-SPCC1322.10","type":"exact"}],"termid":"PR:O94549"}


id: PBO:0064078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 112","termid":"PBO:0064078"}


id: FYPO:0000608
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[118846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in M phase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":2,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"abnormal cell cycle arrest in mitotic M phase","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284"],"single_locus_genotype_uniquenames":["nup61delta"],"synonyms":[{"name":"abnormal cell cycle arrest in M phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic M phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in M phase","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes","type":"related"},{"name":"abnormal mitotic nuclear division arrest","type":"exact"},{"name":"mitotic cell cycle arrest in M-phase","type":"exact"},{"name":"mitotic cell cycle progression in M phase: arrested","type":"related"}],"termid":"FYPO:0000608","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: PBO:0058154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4449","termid":"PBO:0058154"}


id: GO:0106249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex regulating Nodal signaling. Subunits are highly conserved in vertebrates and include Nicalin, NOMO and TMEM147.","definition_xrefs":["PMID:20538592","GOC:al","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Nicalin-NOMO complex","synonyms":[{"name":"Nicalin-TMEM147-NOMO complex","type":"exact"}],"termid":"GO:0106249"}


id: PBO:0069772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1055, pseudogene","termid":"PBO:0069772"}


id: PBO:0065614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A2","termid":"PBO:0065614"}


id: GO:0035171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized hemocyte precursor cell acquires the specialized features of a lamellocyte. Lamellocytes are a hemocyte lineage that exists only in larvae, but are seldom observed in healthy animals. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval lymph gland hemocyte differentiation","termid":"GO:0035168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lamellocyte differentiation","synonyms":[{"name":"lamellocyte cell differentiation","type":"exact"}],"termid":"GO:0035171"}


id: MONDO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of sporadic and inherited neurodegenerative disorders affecting the cerebellum, pons, and inferior olives.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"olivopontocerebellar atrophy","secondary_identifiers":["SCTID:67761004","MEDGEN:10435","MESH:D009849","NCIT:C84947","icd11.foundation:1467584080","ICD9:333.0","DOID:14784","UMLS:C0028968"],"synonyms":[{"name":"Dejerine-Thomas syndrome","type":"exact"},{"name":"OPCA","type":"related"},{"name":"Thomas' syndrome","type":"related"},{"name":"WADIA-swami syndrome","type":"exact"}],"termid":"MONDO:0002017","xrefs":{"Monarch":{"xref_id":"0002017"}}}


id: PBO:0040803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BHLHE40 antisense RNA 1","termid":"PBO:0040803"}


id: GO:0003275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of the outflow tract. The outflow tract is the portion of the heart through which blood flows into the arteries.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"apoptosis involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:0003275"}


id: GO:1900791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving shamixanthone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"shamixanthone metabolic process","synonyms":[{"name":"shamixanthone metabolism","type":"exact"}],"termid":"GO:1900791"}


id: FYPO:0005154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at the mat2P silent mating-type cassette is decreased.","definition_xrefs":["PMID:18354497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin at silent mating-type cassette","termid":"FYPO:0003573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin at mat2P silent mating-type cassette","synonyms":[{"name":"decreased protein localisation to heterochromatin at mat2P silent mating-type cassette","type":"exact"},{"name":"decreased protein localization to heterochromatin at mat2P mating-type region heterochromatin","type":"exact"},{"name":"decreased protein localization to heterochromatin at mat2P silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at mat2P silent mating-type region","type":"exact"},{"name":"decreased protein localization to mat2P silent mating type cassette heterochromatin","type":"exact"},{"name":"decreased protein localization to mat2P silent mating-type cassette heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mat2P silent mating-type cassette heterochromatin during vegetative growth","type":"exact"},{"name":"reduced protein localization to heterochromatin at mat2P silent mating-type cassette","type":"exact"}],"termid":"FYPO:0005154"}


id: PBO:0054389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1785","termid":"PBO:0054389"}


id: PBO:0062948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 6","termid":"PBO:0062948"}


id: MONDO:0026727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shukla-Vernon syndrome","secondary_identifiers":["DOID:0111841","OMIM:301029","GARD:18511","MEDGEN:1674076","UMLS:C5193146"],"synonyms":[{"name":"SHUKLA-VERNON SYNDROME","type":"related"},{"name":"SHUVER","type":"related"},{"name":"Shukla-Vernon syndrome, X-linked recessive","type":"exact"}],"termid":"MONDO:0026727","xrefs":{"Monarch":{"xref_id":"0026727"}}}


id: PBO:0054783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2196","termid":"PBO:0054783"}


id: MONDO:0011704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glaucoma 1, open angle, B (obsolete MONDO:0011704)","secondary_identifiers":["OMIM:606689"],"synonyms":[{"name":"GLC1B","type":"exact"},{"name":"glaucoma 1, open angle, B","type":"exact"},{"name":"glaucoma 1B, primary open angle, adult onset","type":"exact"}],"termid":"MONDO:0011704","xrefs":{"Monarch":{"xref_id":"0011704"}}}


id: PBO:0065276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 1","termid":"PBO:0065276"}


id: GO:1904662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sensory perception of bitter taste.","definition_xrefs":["GOC:TermGenie","PMID:1716172","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"regulation of sensory perception of bitter taste","termid":"GO:1904660"},{"relation_name":"positively_regulates","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sensory perception of bitter taste","synonyms":[{"name":"activation of bitter taste perception","type":"narrow"},{"name":"activation of sensory perception of bitter taste","type":"narrow"},{"name":"positive regulation of bitter taste perception","type":"exact"},{"name":"up regulation of bitter taste perception","type":"exact"},{"name":"up regulation of sensory perception of bitter taste","type":"exact"},{"name":"up-regulation of bitter taste perception","type":"exact"},{"name":"up-regulation of sensory perception of bitter taste","type":"exact"},{"name":"upregulation of bitter taste perception","type":"exact"},{"name":"upregulation of sensory perception of bitter taste","type":"exact"}],"termid":"GO:1904662"}


id: PR:O13789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized beta-glucan synthesis-associated protein C17G6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.11c","synonyms":[{"name":"Spom972h-SPAC17G6.11c","type":"exact"}],"termid":"PR:O13789"}


id: PBO:0059444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A15","termid":"PBO:0059444"}


id: PBO:0012263
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerate phosphomutase","termid":"PBO:0012263"}


id: GO:0099182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The intermediate filament cytoskeleton that is part of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton","termid":"GO:0045111"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic intermediate filament cytoskeleton","termid":"GO:0099182"}


id: PBO:0048671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase beta 1 like","termid":"PBO:0048671"}


id: GO:0033178
data:
  {"annotated_genes":["SJAG_01447","SJAG_01397","SJAG_04015","SJAG_01471","SJAG_01817","SJAG_04955","SJAG_00136","SJAG_00212"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98672,70904,60514,109620,118466,102422,96367,87796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled.","definition_xrefs":["GOC:mah","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex, catalytic domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033178","terms_by_termid":{"GO:0000221":null}}


id: GO:0150163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a microRNA (miRNA) that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:20737563","GOC:aruk","PMID:27145859"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated activation of transcription by RNA polymerase II (obsolete GO:0150163)","termid":"GO:0150163"}


id: FYPO:0006441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"increased protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"increased protein kinase activity during cellular response to HU","type":"exact"}],"termid":"FYPO:0006441"}


id: PR:Q9URX7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein arginine N-methyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine N-methyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC890.07c","secondary_identifiers":["UniProtKB:Q9URX7"],"synonyms":[{"name":"Spom972h-PRMT1","type":"exact"},{"name":"type I PRMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type I protein arginine N-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URX7"}


id: GO:0046095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of deoxyinosine, hypoxanthine deoxyriboside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyinosine metabolic process","termid":"GO:0046094"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside biosynthetic process","termid":"GO:0046123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyinosine biosynthetic process","synonyms":[{"name":"deoxyinosine anabolism","type":"exact"},{"name":"deoxyinosine biosynthesis","type":"exact"},{"name":"deoxyinosine formation","type":"exact"},{"name":"deoxyinosine synthesis","type":"exact"}],"termid":"GO:0046095"}


id: GO:0097698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that occurs by base-excision repair of telomeric DNA in response to DNA damage. Telomeric sequences are particularly susceptible to oxidative DNA damage, due to their G-rich nature.","definition_xrefs":["GOC:jbu","PMID:24703901","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair","termid":"GO:0006284"},{"relation_name":"is_a","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"telomere maintenance via base-excision repair","termid":"GO:0097698"}


id: GO:0043523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in neurons.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron apoptotic process","synonyms":[{"name":"regulation of apoptosis of neuronal cells","type":"exact"},{"name":"regulation of apoptosis of neurons","type":"exact"},{"name":"regulation of neuron apoptosis","type":"narrow"},{"name":"regulation of neuron programmed cell death","type":"exact"},{"name":"regulation of neuronal cell programmed cell death","type":"exact"},{"name":"regulation of programmed cell death of neuronal cells","type":"exact"},{"name":"regulation of programmed cell death, neurons","type":"exact"}],"termid":"GO:0043523"}


id: PBO:0085603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cis-Golgi membrane traffic; v-SNARE that interacts with two t-SNARES, Sed5p and Pep12p; required for multiple vacuolar sorting pathways; human homolog VTI1A can complement yeast null mutant","termid":"PBO:0085603"}


id: MONDO:0013464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Episodic ataxia type 5 (EA5) is an extremely rare form of Hereditary episodic ataxia characterized by recurrent episodes of vertigo and ataxia lasting several hours.","definition_xrefs":["Orphanet:211067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia type 5","secondary_identifiers":["MESH:C566601","MEDGEN:356142","SCTID:718756005","OMIM:613855","UMLS:C1866039","DOID:0050993","GARD:17113"],"synonyms":[{"name":"CACNB4 hereditary episodic ataxia","type":"exact"},{"name":"EA5","type":"related"},{"name":"episodic ataxia, type 5","type":"related"},{"name":"hereditary episodic ataxia caused by mutation in CACNB4","type":"exact"}],"termid":"MONDO:0013464","xrefs":{"Monarch":{"xref_id":"0013464"}}}


id: PATO:0000843
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000843 relative auditory threshold value (obsolete PATO:0000843)","termid":"PATO:0000843"}


id: MONDO:0018971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated oxycephaly is a late-appearing form of nonsyndromic craniosynostosis characterized by premature fusion of both the coronal and sagittal sutures, and, in some cases, of the lambdoid sutures. Compensatory growth in the region of the anterior fontanel results in a pointed or cone-shaped skull.","definition_xrefs":["Orphanet:63440"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"isolated craniosynostosis","termid":"MONDO:0015337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"isolated oxycephaly","secondary_identifiers":["SCTID:48069004","MEDGEN:1726910","UMLS:C5399823"],"synonyms":[{"name":"acrocephaly","type":"exact"},{"name":"hypsicephaly","type":"exact"},{"name":"hypsocephaly","type":"exact"},{"name":"pyrgocephaly","type":"exact"},{"name":"turricephaly","type":"exact"}],"termid":"MONDO:0018971","xrefs":{"Monarch":{"xref_id":"0018971"}}}


id: MONDO:0013548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase-2 deficiency","secondary_identifiers":["UMLS:C0342735","OMIM:614055","MEDGEN:90995","MESH:C536005"],"synonyms":[{"name":"ACAT2","type":"related"},{"name":"ACAT2 deficiency, Isolated cases","type":"exact"},{"name":"ACAT2D","type":"related"},{"name":"ACETYL-CoA acetyltransferase-2 deficiency","type":"related"},{"name":"Acat2 deficiency","type":"related"},{"name":"Acetocoenzyme A acetyltransferase 2","type":"related"},{"name":"Acetyl CoA acetyltransferase 2 deficiency","type":"related"},{"name":"acetoacetyl CoA thiolase, cytosolic","type":"related"},{"name":"acetyl-CoA acetyltransferase-2 deficiency","type":"exact"}],"termid":"MONDO:0013548","xrefs":{"Monarch":{"xref_id":"0013548"}}}


id: PBO:0004781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 5 (predicted)","termid":"PBO:0004781"}


id: PBO:0036527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA binding protein, vigilin (predicted)","termid":"PBO:0036527"}


id: GO:0007150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process whereby cells develop a specific morphology under a specific set of circumstances.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete growth pattern (obsolete GO:0007150)","synonyms":[{"name":"growth pattern","type":"exact"}],"termid":"GO:0007150"}


id: PBO:0083673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum zinc transporter; part of a heterodimeric transporter with Zrg17p that transfers zinc from the cytosol to the ER lumen; member of the cation diffusion facilitator family of efflux pumps; localizes to ER and nucleus; mutations affect the cellular distribution of zinc and also confer defects in meiotic recombination between homologous chromatids","termid":"PBO:0083673"}


id: PBO:0077482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 202","termid":"PBO:0077482"}


id: PBO:0083648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongin C, conserved among eukaryotes; forms a complex with Cul3p that polyubiquitylates monoubiquitylated RNA polymerase II to trigger its proteolysis; plays a role in global genomic repair","termid":"PBO:0083648"}


id: PBO:0113218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Moonlighting protein component of both the ERMES and SAM complex; subunit of the ERMES complex that acts as a molecular tether between the mitochondria and the ER, necessary for both efficient phospholipid exchange between organelles and for mitophagy; SAM/TOB complex subunit that functions in the assembly of outer membrane beta-barrel proteins; involved in mitochondrial inheritance and morphology; ERMES complex often co-localizes with peroxisomes adjacent to mitochondria-ER junctions","termid":"PBO:0113218"}


id: GO:1903232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a melanosome, a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored.","definition_xrefs":["GOC:bf","PMID:22511774","GO_REF:0000079","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanosome organization","termid":"GO:0032438"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"melanosome assembly","synonyms":[{"name":"melanosome formation","type":"exact"}],"termid":"GO:1903232"}


id: FYPO:0005046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation. Although one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated, mitotic sister chromatid segregation does eventually go on to complete separation of chromosomes.","definition_xrefs":["PMID:20935472","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"},{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"},{"relation_name":"is_a","term_name":"lagging mitotic chromosomes, with complete sister chromatid separation","termid":"FYPO:0004101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000054"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0000641","FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes, complete sister chromatid separation, and decreased rate of mitotic spindle elongation","synonyms":[{"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes, complete sister chromatid separation, and decreased rate of mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"abnormal sister chromatid segregation with lagging chromosomes, complete sister chromatid separation, and decreased rate of spindle elongation during mitotic cell cycle","type":"related"},{"name":"lagging mitotic chromosomes, with complete sister chromatid separation and decreased spindle elongation rate","type":"exact"},{"name":"lagging mitotic chromosomes, with complete sister chromatid separation, and decreased rate of mitotic spindle elongation","type":"exact"},{"name":"lagging mitotic sister chromatids, with complete sister chromatid separation, and decreased rate of mitotic spindle elongation","type":"exact"}],"termid":"FYPO:0005046"}


id: PATO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000074 shattering (obsolete PATO:0000074)","termid":"PATO:0000074"}


id: GO:0090465
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96369],"is_not":false,"summary":null,"term":"GO:0090465"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of arginine within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular arginine homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine homeostasis","type":"exact"},{"name":"cellular arginine homeostasis","type":"exact"}],"termid":"GO:0090465","terms_by_termid":{"GO:0090465":null}}


id: MONDO:0007375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial and subepithelial corneal dystrophy","termid":"MONDO:0000763"},{"relation_name":"is_a","term_name":"epithelial-stromal TGFBI dystrophy","termid":"MONDO:0000764"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epithelial basement membrane dystrophy","secondary_identifiers":["MEDGEN:99275","GARD:9732","SCTID:373426005","DOID:0060447","OMIM:121820","Orphanet:98956","UMLS:C0521723","MESH:C535477"],"synonyms":[{"name":"Cogan corneal dystrophy","type":"exact"},{"name":"Cogan microcystic epithelial dystrophy","type":"exact"},{"name":"EBMD","type":"exact"},{"name":"Map-dot-fingerprint dystrophy","type":"exact"},{"name":"Map-dot-fingerprint dystrophy of cornea","type":"related"},{"name":"anterior basement membrane dystrophy","type":"exact"},{"name":"corneal dystrophy, Map-Dot-Fingerprint type","type":"related"},{"name":"corneal dystrophy, anterior basement Membrane","type":"related"},{"name":"corneal dystrophy, epithelial basement MEMBRANE","type":"related"},{"name":"corneal dystrophy, microcystic","type":"related"},{"name":"epithelial basement membrane corneal dystrophy","type":"related"},{"name":"microcystic corneal dystrophy","type":"exact"},{"name":"microcystic dystrophy of the cornea","type":"related"}],"termid":"MONDO:0007375","xrefs":{"Monarch":{"xref_id":"0007375"}}}


id: MONDO:0016325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease with hypertrophic cardiomyopathy (obsolete MONDO:0016325)","secondary_identifiers":["Orphanet:217572","ICD10CM:E74.0"],"synonyms":[{"name":"GSD with hypertrophic cardiomyopathy","type":"exact"},{"name":"glycogenosis with hypertrophic cardiomyopathy","type":"exact"}],"termid":"MONDO:0016325","xrefs":{"Monarch":{"xref_id":"0016325"}}}


id: FYPO:0007657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is decreased at one or more meiotic recombination hotspots.","definition_xrefs":["PMID:23395004","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to linear element","termid":"FYPO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to linear element at meiotic recombination hotspot","synonyms":[{"name":"decreased linear element chromatin binding at meiotic DNA double-strand break hotspots","type":"exact"},{"name":"decreased protein localisation to linear element at meiotic recombination hotspot","type":"exact"},{"name":"reduced protein localization to linear element at meiotic recombination hotspot","type":"exact"}],"termid":"FYPO:0007657"}


id: PBO:0035938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_ubiquitination_during_vegetative_growth","termid":"PBO:0035938"}


id: PATO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility which is relative high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mobile","termid":"PATO:0000299"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased mobility","termid":"PATO:0002282"}


id: GO:0033349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving apiose, the branched tetrose 3-C-(hydroxymethyl)-D-glycero-tetrose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrose metabolic process","termid":"GO:0033347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"apiose metabolic process","synonyms":[{"name":"apiose metabolism","type":"exact"}],"termid":"GO:0033349"}


id: MONDO:0014480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 9","secondary_identifiers":["MEDGEN:863566","OMIM:616067","DOID:0111770","GARD:18361","UMLS:C4015129"],"synonyms":[{"name":"46,XY SEX reversal 9","type":"related"},{"name":"46,XY Sex reversal type 9","type":"exact"},{"name":"46,XY Sex reversal, Zfpm2-related","type":"related"},{"name":"46,XY sex reversal 9","type":"exact"},{"name":"46XY sex reversal 9","type":"exact"},{"name":"SRXY9","type":"related"}],"termid":"MONDO:0014480","xrefs":{"Monarch":{"xref_id":"0014480"}}}


id: PBO:0050927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 4 pseudogene","termid":"PBO:0050927"}


id: PBO:0061546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IA","termid":"PBO:0061546"}


id: PBO:0078900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 9-1","termid":"PBO:0078900"}


id: GO:0009668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of either of the lipid bilayers surrounding a plastid.","definition_xrefs":["GOC:jl","GOC:dph","GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plastid membrane organization","synonyms":[{"name":"plastid membrane organisation","type":"exact"},{"name":"plastid membrane organization and biogenesis","type":"related"}],"termid":"GO:0009668"}


id: MONDO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe combined immunodeficiency that results from defective IL7R expression causes T-B+NK+ SCID. Loss of IL-7R function leads to the loss of an antiapoptotic signal, resulting in a loss of T-cell selection in thymus.","definition_xrefs":["DOID:0060015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency due to IL-7Ralpha deficiency","secondary_identifiers":["Orphanet:169154","MEDGEN:1842915","UMLS:C5679577","GARD:17051"],"synonyms":[{"name":"IL-7R","type":"exact"},{"name":"IL-7Ralpha deficiency","type":"exact"},{"name":"T-B+ SCID due to IL-7Ralpha deficiency","type":"exact"},{"name":"interleukin-7 receptor alpha deficiency","type":"related"}],"termid":"MONDO:0015701","xrefs":{"Monarch":{"xref_id":"0015701"}}}


id: PBO:0074036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A21 antisense RNA 1","termid":"PBO:0074036"}


id: MONDO:0007708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kasabach-Merritt syndrome (KMS), also known as hemangioma-thrombocytopenia syndrome, is a rare disorder characterized by profound thrombocytopenia, microangiopathic hemolytic anemia, and subsequent consumptive coagulopathy in association with vascular tumors, particularly kaposiform hemangioendothelioma or tufted angioma.","definition_xrefs":["Orphanet:2330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kasabach-Merritt syndrome","secondary_identifiers":["OMIM:141000","UMLS:C0221025","ICD9:287.39","icd11.foundation:2059601885","MedDRA:10058423","MEDGEN:65122","NCIT:C3821","GARD:70","MESH:D059885","NANDO:2100297","NANDO:2201035","SCTID:86635005","NORD:1320"],"synonyms":[{"name":"KMP","type":"related"},{"name":"Kasabach Merritt phenomenon","type":"exact"},{"name":"Kasabach Merritt syndrome","type":"exact"},{"name":"Kasabach-Merritt Phenomenon","type":"exact"},{"name":"Kasabach-Merritt syndrome","type":"exact"},{"name":"hemangioma thrombocytopenia syndrome","type":"related"},{"name":"hemangioma-hemorrhage syndrome","type":"exact"},{"name":"hemangioma-thrombocytopenia syndrome","type":"exact"},{"name":"hemangiomatosis with thrombocytopenia","type":"exact"},{"name":"thrombocytopenia-hemangioma syndrome","type":"exact"},{"name":"thrombopenia-hemangioma syndrome","type":"exact"}],"termid":"MONDO:0007708","xrefs":{"Monarch":{"xref_id":"0007708"}}}


id: PR:Q9HGP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mbx2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGP0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor pvg4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC317.01","synonyms":[{"name":"MADS-box transcription factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PvGal synthesis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mbx2","type":"exact"},{"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGP0"}


id: GO:0070101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a chemokine-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of chemokine-mediated signaling pathway","termid":"GO:0070099"},{"relation_name":"positively_regulates","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine-mediated signaling pathway","synonyms":[{"name":"positive regulation of chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070101"}


id: MONDO:0800039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTND5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005336"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTND5","synonyms":[{"name":"MTND5 MELAS syndrome","type":"exact"}],"termid":"MONDO:0800039","xrefs":{"Monarch":{"xref_id":"0800039"}}}


id: PBO:0001047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Tsr1 (predicted)","termid":"PBO:0001047"}


id: GO:0075004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a spore of the symbiont to its host via adhesion molecules, general stickiness etc. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont spore to host","synonyms":[{"name":"adhesion of symbiont spore to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075004"}


id: PBO:0065311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 33","termid":"PBO:0065311"}


id: PBO:0082622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the Rpd3S and Rpd3L histone deacetylase complexes; involved in transcriptional repression and activation of diverse processes, including mating-type switching and meiosis; involved in the maintenance of chromosomal integrity","termid":"PBO:0082622"}


id: GO:0007075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase III promoter as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis, from RNA polymerase III promoter (obsolete GO:0007075)","synonyms":[{"name":"activation of transcription on exit from mitosis, from Pol III promoter","type":"narrow"},{"name":"activation of transcription on exit from mitosis, from RNA polymerase III promoter","type":"narrow"}],"termid":"GO:0007075"}


id: PBO:0030406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-Glc3Man9GlcNAc_absent_from_cell","termid":"PBO:0030406"}


id: PBO:0067338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 431, pseudogene","termid":"PBO:0067338"}


id: PBO:0040918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 22","termid":"PBO:0040918"}


id: GO:0120341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short portion of the radial spoke 2 (RS2) that is directly anchored to the A microtubule of an axonemal microtubule doublet.","definition_xrefs":["PMID:25694453","GOC:krc","PMID:22754630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke base","termid":"GO:0120339"},{"relation_name":"part_of","term_name":"radial spoke 2","termid":"GO:0120334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"radial spoke base 2","termid":"GO:0120341"}


id: GO:0019611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"4-toluenecarboxylate metabolic process","synonyms":[{"name":"4-toluenecarboxylate metabolism","type":"exact"},{"name":"p-toluate metabolic process","type":"exact"},{"name":"p-toluate metabolism","type":"exact"}],"termid":"GO:0019611"}


id: GO:0021765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cingulate gyrus over time from its initial formation until its mature state. The cingulate gyrus is a ridge in the cerebral cortex located dorsal to the corpus callosum.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","ISBN:0878937420","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cingulate gyrus development","termid":"GO:0021765"}


id: PBO:0075451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA3 antisense RNA 1 (head to head)","termid":"PBO:0075451"}


id: GO:0031635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by an opioid binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting opioid receptor signaling pathway","synonyms":[{"name":"inhibition of adenylate cyclase activity by opioid receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by opioid receptor signalling pathway","type":"related"},{"name":"opioid receptor, adenylate cyclase inhibiting pathway","type":"exact"}],"termid":"GO:0031635"}


id: GO:0046062
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95244,107013,92201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dCDP, deoxycytidine 5'-diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dCDP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dCDP metabolism","type":"exact"}],"termid":"GO:0046062","terms_by_termid":{"GO:0006240":null}}


id: GO:0050350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + 3,4',5-trihydroxy-stilbene + 4 CO2.","definition_xrefs":["EC:2.3.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"trihydroxystilbene synthase activity","secondary_identifiers":["RHEA:11936","MetaCyc:RXN-87"],"synonyms":[{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing)","type":"broad"},{"name":"resveratrol synthase activity","type":"related"},{"name":"stilbene synthase activity","type":"broad"}],"termid":"GO:0050350"}


id: PBO:0080984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 20","termid":"PBO:0080984"}


id: GO:0044379
data:
  {"annotated_genes":["SJAG_02228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106919],"is_not":false,"summary":null,"term":"GO:0044379"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, an actin cortical patch.","definition_xrefs":["GOC:mah","PMID:21620704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to actin cortical patch","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:0044379","terms_by_termid":{"GO:0044379":null}}


id: PBO:0076981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase 1, pseudogene","termid":"PBO:0076981"}


id: SO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The paternal copy of the gene is modified, rendering it transcriptionally silent.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_imprinted","termid":"SO:0000134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally_imprinted","synonyms":[{"name":"paternally imprinted","type":"exact"}],"termid":"SO:0000136"}


id: MONDO:0019150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Familial restrictive cardiomyopathy is a genetic form of heart disease, in which the heart muscle is stiff and cannot fully relax after each contraction. Impaired muscle relaxation causes blood to back up in the atria and lungs, which reduces the amount of blood in the ventricles.","gene_count":0,"genotype_count":0,"name":"obsolete familial isolated restrictive cardiomyopathy (obsolete MONDO:0019150)","secondary_identifiers":["Orphanet:75249"],"synonyms":[{"name":"familial or idiopathic restrictive cardiomyopathy","type":"exact"}],"termid":"MONDO:0019150","xrefs":{"Monarch":{"xref_id":"0019150"}}}


id: PBO:0077470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 191A (pseudogene)","termid":"PBO:0077470"}


id: GO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trimethylation of the N-terminal alanine of proteins to form the derivative peptidyl-N,N,N-trimethyl-L-alanine.","definition_xrefs":["RESID:AA0062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine trimethylation","termid":"GO:0018012"}


id: GO:0044627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of the classical pathway of complement activation, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation, classical pathway in another organism (obsolete GO:0044627)","synonyms":[{"name":"modulation of complement activation, classical pathway in other organism","type":"exact"},{"name":"regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044627"}


id: PBO:0056585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCUR1 pseudogene 1","termid":"PBO:0056585"}


id: PBO:0052404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 5A","termid":"PBO:0052404"}


id: MONDO:0018589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"AApoAIV amyloidosis","secondary_identifiers":["GARD:21828","Orphanet:439232","UMLS:C5568805","DOID:0080927","icd11.foundation:1235542353","MEDGEN:1800228"],"synonyms":[{"name":"apolipoprotein A-IV amyloidosis","type":"exact"}],"termid":"MONDO:0018589","xrefs":{"Monarch":{"xref_id":"0018589"}}}


id: PBO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 3","termid":"PBO:0046140"}


id: PBO:0077567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 273","termid":"PBO:0077567"}


id: GO:2001287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of caveolin-mediated endocytosis","termid":"GO:2001286"},{"relation_name":"negatively_regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of caveolin-mediated endocytosis","synonyms":[{"name":"negative regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"negative regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"negative regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001287"}


id: FYECO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which copper chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CuCl2","synonyms":[{"name":"copper chloride added","type":"exact"}],"termid":"FYECO:0000184"}


id: PBO:0090585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNAHis guanylyltransferase Thg1","termid":"PBO:0090585"}


id: PBO:0085703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in rRNA and ribosome biogenesis; activated in stochastic pulses of nuclear localization; binds polymerase A and C motif; subunit of the RPD3L histone deacetylase complex; has chromatin specific SANT domain; involved in telomeric gene silencing and filamentation; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085703"}


id: PBO:0088416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit 11","termid":"PBO:0088416"}


id: PBO:0039250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 2 family member","termid":"PBO:0039250"}


id: MONDO:0010941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nocturnal enuresis where the child has been dry for at least 6 months but enuresis has recurred.","direct_ancestors":[{"relation_name":"is_a","term_name":"nocturnal enuresis","termid":"MONDO:0000022"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nocturnal enuresis, 2","secondary_identifiers":["MEDGEN:331473","UMLS:C1833268","MESH:C563439","OMIM:600808"],"synonyms":[{"name":"ENUR2","type":"related"},{"name":"enuresis, nocturnal, 2","type":"related"}],"termid":"MONDO:0010941","xrefs":{"Monarch":{"xref_id":"0010941"}}}


id: GO:0043927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap.","definition_xrefs":["GOC:mtg_mpo"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic nuclear-transcribed mRNA catabolic process involved in endonucleolytic cleavage-dependent decay (obsolete GO:0043927)","termid":"GO:0043927"}


id: GO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh","PMID:12044938"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to oxidative stress (obsolete GO:0001306)","termid":"GO:0001306"}


id: PBO:0050585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate 6-O-sulfotransferase 2","termid":"PBO:0050585"}


id: PATO:0001287
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red and brown hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"red brown","termid":"PATO:0001287"}


id: PBO:0068938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 181, pseudogene","termid":"PBO:0068938"}


id: PBO:0047204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 218 member B, pseudogene","termid":"PBO:0047204"}


id: MONDO:0000683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to rely on visual cues to guide them directionally due to the inability to recognize objects.","definition_xrefs":["DOID:0060153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual agnosia","termid":"MONDO:0000685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topographical agnosia","secondary_identifiers":["UMLS:C0271189","SCTID:83824009","MEDGEN:78761"],"termid":"MONDO:0000683","xrefs":{"Monarch":{"xref_id":"0000683"}}}


id: MOD:01908
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue to the 4-sulfophenyl isothiocyanate adduct, alpha-amino-[(4-sulfophenyl)carbamothioyl] residue.","definition_xrefs":["PubMed:14745769","PubMed:14689565","PubMed:15549660","PubMed:16526082","Unimod:261#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-sulfophenyl isothiocyanate alpha-amino derivatized residue","synonyms":[{"name":"4-sulfophenyl isothiocyanate","type":"related"},{"name":"SPITC","type":"related"},{"name":"alpha-amino-[(4-sulfophenyl)carbamothioyl] residue","type":"exact"}],"termid":"MOD:01908"}


id: GO:2000019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of male gonad development.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gonad development","termid":"GO:1905940"},{"relation_name":"is_a","term_name":"regulation of male gonad development","termid":"GO:2000018"},{"relation_name":"negatively_regulates","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of male gonad development","synonyms":[{"name":"negative regulation of testicular development","type":"exact"},{"name":"negative regulation of testis development","type":"exact"}],"termid":"GO:2000019"}


id: GO:0008890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + glycine = L-2-amino-3-oxobutanoate + CoA.","definition_xrefs":["EC:2.3.1.29","RHEA:20736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acetyltransferase activity","termid":"GO:0016453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"glycine C-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00371","MetaCyc:AKBLIG-RXN"],"synonyms":[{"name":"glycine acetyltransferase activity","type":"related"}],"termid":"GO:0008890"}


id: FYPO:0004597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which DNA replication is initiated at one or more origins during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:11532929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"replication origin firing during mitotic G2 phase","synonyms":[{"name":"replication origin firing during G2 phase of mitotic cell cycle","type":"exact"},{"name":"replication origin firing during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004597"}


id: GO:0015349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of thyroid hormones from one side of a membrane to the other. Thyroid hormone are any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"thyroid hormone transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-9631987","Reactome:R-HSA-879575"],"termid":"GO:0015349"}


id: PBO:0049312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSTT1 antisense RNA 1","termid":"PBO:0049312"}


id: PBO:0040207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTN2 antisense RNA 1","termid":"PBO:0040207"}


id: PATO:0001054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex angle that is inside two adjacent sides of a polygon.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex angle to","termid":"PATO:0001053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal angle","termid":"PATO:0001054"}


id: PBO:0054832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2245","termid":"PBO:0054832"}


id: PBO:0034348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-connected_to","termid":"PBO:0034348"}


id: MONDO:0013258
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87086],"is_not":false,"summary":null,"term":"MONDO:0013258"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613410","MEDGEN:462027","UMLS:C3150677"],"synonyms":[{"name":"AUTS16","type":"related"},{"name":"autism susceptibility 16","type":"exact"},{"name":"autism with or without seizures","type":"related"},{"name":"autism, susceptibility to, 16","type":"exact"},{"name":"autism, susceptibility to, type 16","type":"exact"},{"name":"susceptibility to autism 16","type":"related"}],"termid":"MONDO:0013258","terms_by_termid":{"MONDO:0013258":null},"xrefs":{"Monarch":{"xref_id":"0013258"}}}


id: GO:0106430
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57238],"is_not":false,"summary":null,"term":"GO:0106430"}]},"cv_name":"molecular_function","definition":"(S)-dihydroorotate + a quinone = orotate + a quinol.","definition_xrefs":["RHEA:30187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:1.3.5.2"],"termid":"GO:0106430","terms_by_termid":{"GO:0106430":null}}


id: PATO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000529 drug sensitive (obsolete PATO:0000529)","termid":"PATO:0000529"}


id: MONDO:0021446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the epiglottis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign laryngeal neoplasm","termid":"MONDO:0002354"},{"relation_name":"is_a","term_name":"epiglottis neoplasm","termid":"MONDO:0004109"},{"relation_name":"is_a","term_name":"benign neoplasm of hypopharynx","termid":"MONDO:0021461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of epiglottis","secondary_identifiers":["UMLS:C0347236","icd11.foundation:1549564600","MEDGEN:83861","NCIT:C4606","SCTID:92089006"],"synonyms":[{"name":"benign Epiglottis neoplasm","type":"exact"},{"name":"benign Epiglottis tumor","type":"exact"},{"name":"benign Epiglottis tumour","type":"exact"},{"name":"benign epiglottic neoplasm","type":"exact"},{"name":"benign epiglottic tumor","type":"exact"},{"name":"benign epiglottic tumour","type":"exact"},{"name":"benign neoplasm of the Epiglottis","type":"exact"},{"name":"benign tumor of Epiglottis","type":"exact"},{"name":"benign tumor of the Epiglottis","type":"exact"},{"name":"benign tumour of Epiglottis","type":"exact"},{"name":"benign tumour of the Epiglottis","type":"exact"},{"name":"epiglottis benign neoplasm","type":"exact"}],"termid":"MONDO:0021446","xrefs":{"Monarch":{"xref_id":"0021446"}}}


id: PBO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.6.1","termid":"PBO:0001622"}


id: SO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of match parts.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000038 match_set (obsolete SO:0000038)","termid":"SO:0000038"}


id: PBO:0004373
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds Forkhead 5'-TTT[G/A]TTTACA-3'","termid":"PBO:0004373"}


id: GO:0044444
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic part (obsolete GO:0044444)","synonyms":[{"name":"cytoplasm component","type":"exact"}],"termid":"GO:0044444"}


id: PBO:0050493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B3","termid":"PBO:0050493"}


id: MONDO:0009899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhydramnios, chronic idiopathic","secondary_identifiers":["MESH:C564876","MEDGEN:340402","UMLS:C1849720","OMIM:263610"],"synonyms":[{"name":"Lactogen receptor defect of chorion","type":"related"},{"name":"polyhydramnios, chronic idiopathic","type":"exact"}],"termid":"MONDO:0009899","xrefs":{"Monarch":{"xref_id":"0009899"}}}


id: GO:0072546
data:
  {"annotated_genes":["SJAG_02065","SJAG_02437","SJAG_04294","SJAG_00277","SJAG_01127","SJAG_01223","SJAG_01999","SJAG_02914"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71957,74525,75278,76771,78207,79972,91429,100947],"is_not":false,"summary":null,"term":"GO:0072546"}]},"cv_name":"cellular_component","definition":"A transmembrane protein complex located in the endoplasmic reticulum (ER) involved in the insertion of newly synthesized proteins in the membrane of the ER. In S. cerevisiae, it has six members: EMC1, EMC2, AIM27, EMC4, KRE27, and EMC6.","definition_xrefs":["PMID:29242231","PMID:32459176","PMID:30415835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00277":null,"SJAG_01127":null,"SJAG_01223":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02437":null,"SJAG_02914":null,"SJAG_04294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005789","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"EMC complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER membrane protein complex","type":"broad"},{"name":"endoplasmic reticulum membrane protein complex","type":"broad"}],"termid":"GO:0072546","terms_by_termid":{"GO:0072546":null}}


id: PBO:0063251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha subfamily C, 2","termid":"PBO:0063251"}


id: GO:0043515
data:
  {"annotated_genes":["SJAG_00684"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118945],"is_not":false,"summary":null,"term":"GO:0043515"}]},"cv_name":"molecular_function","definition":"Binding to a kinetochore, a proteinaceous structure on a condensed chromosome, beside the centromere, to which the spindle fibers are attached.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"kinetochore binding","references_by_uniquename":{"PMID:32109380":null},"termid":"GO:0043515","terms_by_termid":{"GO:0043515":null}}


id: FYPO:0007287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the galactosylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal. Protein galactosylation is the addition of a galactose residue to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0042125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein glycosylation during vegetative growth","termid":"FYPO:0001911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein galactosylation during vegetative growth","synonyms":[{"name":"decreased protein galactosylation during mitotic cell cycle","type":"related"},{"name":"reduced protein galactosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007287"}


id: GO:0039685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral DNA replication process where a 3' hairpin structure in the viral single-stranded DNA (ssDNA) template serves as a primer for host enzymes to synthesize DNA.","definition_xrefs":["GOC:bf","VZ:2656","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"rolling hairpin viral DNA replication","synonyms":[{"name":"ssDNA rolling hairpin viral DNA replication","type":"exact"}],"termid":"GO:0039685"}


id: GO:0030945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The catalysis of phosphate removal from a phosphotyrosine using cysteine as a nucleophile and proceed by means of a thiol-phosphate intermediate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete protein tyrosine phosphatase activity, via thiol-phosphate intermediate (obsolete GO:0030945)","termid":"GO:0030945"}


id: GO:0140102
data:
  {"annotated_genes":["SJAG_02821","SJAG_03289","SJAG_03773","SJAG_02417","SJAG_03713","SJAG_03016","SJAG_02281","SJAG_00722","SJAG_02350","SJAG_02024","SJAG_03332","SJAG_00943","SJAG_03877","SJAG_01958","SJAG_03008","SJAG_03755"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"},{"annotations":[57337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106388"},{"annotations":[94949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"},{"annotations":[76927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016433"},{"annotations":[98161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106142"},{"annotations":[59541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000179"},{"annotations":[95375,78744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"},{"annotations":[94661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070043"},{"annotations":[89388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070039"},{"annotations":[75519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070037"},{"annotations":[78408,75432,75700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[79277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070042"},{"annotations":[109954,73135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008649"}]},"cv_name":"molecular_function","definition":"Catalytic activity that acts to modify a ribosomal RNA.","definition_xrefs":["GOC:molecular_function_refactoring","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_00943":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02350":null,"SJAG_02417":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03713":null,"SJAG_03755":null,"SJAG_03773":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"catalytic activity, acting on a rRNA","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0140102","terms_by_termid":{"GO:0000179":null,"GO:0008649":null,"GO:0008650":null,"GO:0009383":null,"GO:0016433":null,"GO:0052907":null,"GO:0052909":null,"GO:0070037":null,"GO:0070039":null,"GO:0070042":null,"GO:0070043":null,"GO:0106142":null,"GO:0106388":null}}


id: PBO:0087002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor; involved in the localization and regulation of Cdc42p and Rho1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087002"}


id: PBO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transporter (predicted)","termid":"PBO:0000380"}


id: MONDO:0016186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of myofibrillar proteins","secondary_identifiers":["GARD:20425","MEDGEN:1842566","UMLS:C5680851","Orphanet:209038"],"termid":"MONDO:0016186","xrefs":{"Monarch":{"xref_id":"0016186"}}}


id: GO:0031646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a neurophysiological process.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nervous system process","synonyms":[{"name":"activation of neurological process","type":"narrow"},{"name":"positive regulation of neurological process","type":"exact"},{"name":"positive regulation of neurological system process","type":"exact"},{"name":"positive regulation of neurophysiological process","type":"exact"},{"name":"stimulation of neurological process","type":"narrow"},{"name":"up regulation of neurological process","type":"exact"},{"name":"up-regulation of neurological process","type":"exact"},{"name":"upregulation of neurological process","type":"exact"}],"termid":"GO:0031646"}


id: GO:0018201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-glycine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glycine modification","termid":"GO:0018201"}


