# terms

id: GO:0031970
data:
  {"annotated_genes":["SJAG_02656","SJAG_01996","SJAG_00480","SJAG_05199","SJAG_01949","SJAG_01647","SJAG_02744","SJAG_02524","SJAG_05261","SJAG_02360","SJAG_01140","SJAG_00564","SJAG_03199","SJAG_00576","SJAG_00449","SJAG_02887","SJAG_04533","SJAG_04208","SJAG_00230","SJAG_01560","SJAG_06440","SJAG_02038","SJAG_00455","SJAG_00687","SJAG_02917","SJAG_00668","SJAG_05398","SJAG_02592","SJAG_02229","SJAG_03574","SJAG_00196","SJAG_04008","SJAG_04116"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[116795,60885,101966,103770,104664,106619,76214,94726,76924,106926,76524,59387,61259,107230,66680,112862,99829,77707,99914,69110,61862,78052,94198,62503,96891,94123,69988,88083,78486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005758"},{"annotations":[116008,88416,92551,90152],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042719"}]},"cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of an organelle envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"organelle envelope","termid":"GO:0031967"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00230":null,"SJAG_00449":null,"SJAG_00455":null,"SJAG_00480":null,"SJAG_00564":null,"SJAG_00576":null,"SJAG_00668":null,"SJAG_00687":null,"SJAG_01140":null,"SJAG_01560":null,"SJAG_01647":null,"SJAG_01949":null,"SJAG_01996":null,"SJAG_02038":null,"SJAG_02229":null,"SJAG_02360":null,"SJAG_02524":null,"SJAG_02592":null,"SJAG_02656":null,"SJAG_02744":null,"SJAG_02887":null,"SJAG_02917":null,"SJAG_03199":null,"SJAG_03574":null,"SJAG_04008":null,"SJAG_04116":null,"SJAG_04208":null,"SJAG_04533":null,"SJAG_05199":null,"SJAG_05261":null,"SJAG_05398":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle envelope lumen","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"organelle intermembrane space","type":"exact"}],"termid":"GO:0031970","terms_by_termid":{"GO:0005758":null,"GO:0042719":null}}


id: PBO:0063951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin induced protein","termid":"PBO:0063951"}


id: GO:0019461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamine into fumarate, beginning with the conversion of glutamine to glutamate catalyzed by the enzyme glutamate synthase (NADPH) (EC:1.4.1.13).","definition_xrefs":["GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamine catabolic process to fumarate, using glutamate synthase (NADPH) (obsolete GO:0019461)","synonyms":[{"name":"glutamate catabolic process to fumarate, using glutamate synthase (NADPH)","type":"related"},{"name":"glutamine breakdown to fumarate, using glutamate synthase (NADPH)","type":"exact"},{"name":"glutamine degradation to fumarate, using glutamate synthase (NADPH)","type":"exact"}],"termid":"GO:0019461"}


id: PBO:0045152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAH8 divergent transcript","termid":"PBO:0045152"}


id: PBO:0057393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-1","termid":"PBO:0057393"}


id: MONDO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm that arises from the dermis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermis tumor","secondary_identifiers":["NCIT:C4475","MEDGEN:91075","DOID:2438","UMLS:C0346041"],"synonyms":[{"name":"dermal neoplasm","type":"exact"},{"name":"dermal tumor","type":"exact"},{"name":"dermal tumour","type":"exact"},{"name":"dermis neoplasm","type":"exact"},{"name":"dermis neoplasm (disease)","type":"exact"},{"name":"dermis tumor","type":"exact"},{"name":"neoplasm of dermis","type":"exact"},{"name":"neoplasm of the dermis","type":"exact"},{"name":"tumor of dermis","type":"exact"},{"name":"tumor of the dermis","type":"exact"},{"name":"tumour of dermis","type":"exact"},{"name":"tumour of the dermis","type":"exact"}],"termid":"MONDO:0002300","xrefs":{"Monarch":{"xref_id":"0002300"}}}


id: PBO:0069008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 252, pseudogene","termid":"PBO:0069008"}


id: GO:0070299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction via a phosphorelay signal transduction system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorelay signal transduction system","termid":"GO:0070297"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of phosphorelay signal transduction system","synonyms":[{"name":"activation of two-component signal transduction","type":"narrow"},{"name":"positive regulation of histidyl-aspartyl phosphorelay","type":"exact"},{"name":"positive regulation of two-component signal transduction system (phosphorelay)","type":"narrow"},{"name":"stimulation of two-component signal transduction","type":"narrow"},{"name":"up regulation of two-component signal transduction","type":"exact"},{"name":"up-regulation of two-component signal transduction","type":"exact"},{"name":"upregulation of two-component signal transduction","type":"exact"}],"termid":"GO:0070299"}


id: PBO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein","termid":"PBO:0002566"}


id: PBO:0028498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ribosome_binding","termid":"PBO:0028498"}


id: PBO:0034437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_diglyceride_level","termid":"PBO:0034437"}


id: PBO:0066815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 114","termid":"PBO:0066815"}


id: PBO:0066124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASSF3 divergent transcript","termid":"PBO:0066124"}


id: MOD:01161
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes oxygen atoms from a residue without the removal of hydrogen atoms.","definition_xrefs":["PubMed:14235557","Unimod:447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reduced residue","termid":"MOD:01472"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxygenated residue","synonyms":[{"name":"Deoxy","type":"related"},{"name":"dOxyRes","type":"exact"},{"name":"reduction","type":"related"}],"termid":"MOD:01161"}


id: MONDO:1010492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, pig","secondary_identifiers":["OMIA:001041-9823"],"termid":"MONDO:1010492","xrefs":{"Monarch":{"xref_id":"1010492"}}}


id: PBO:0089406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S7","termid":"PBO:0089406"}


id: PBO:0063219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 8 pseudogene 1","termid":"PBO:0063219"}


id: GO:0035269
data:
  {"annotated_genes":["SJAG_04053","SJAG_01264","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92801,101296,105725],"is_not":false,"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The transfer of mannose from dolichyl activated mannose to the hydroxyl group of a seryl or threonyl residue of a protein acceptor molecule, to form an O-linked protein-sugar linkage.","definition_xrefs":["GOC:bf","PMID:9878797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"protein mannosylation","termid":"GO:0035268"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01264":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked mannosylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein amino acid O-linked mannosylation","type":"exact"}],"termid":"GO:0035269","terms_by_termid":{"GO:0035269":null}}


id: GO:0008180
data:
  {"annotated_genes":["SJAG_04948","SJAG_02764","SJAG_03733","SJAG_00662","SJAG_03325","SJAG_04011","SJAG_00720"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63450,71835,76152,80189,92648,92770,99857],"is_not":false,"summary":null,"term":"GO:0008180"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome.","definition_xrefs":["PMID:12186635","PMID:11019806","PMID:14570571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_00720":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03733":null,"SJAG_04011":null,"SJAG_04948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"COP9 signalosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"COP9 complex","type":"exact"},{"name":"CSN","type":"exact"},{"name":"signalosome","type":"broad"}],"termid":"GO:0008180","terms_by_termid":{"GO:0008180":null}}


id: PBO:0016957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine-rich Schizosaccharomyces specific protein","termid":"PBO:0016957"}


id: GO:0102550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 2-methyl-6-geranylgeranyl-1,4-benzoquinol = S-adenosyl-L-homocysteine + 2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol + H+.","definition_xrefs":["EC:2.1.1.295","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14917","RHEA:38007"],"termid":"GO:0102550"}


id: GO:0005369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: taurine(out) + Na+(out) = taurine(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"taurine transmembrane transporter activity","termid":"GO:0005368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"taurine:sodium symporter activity","synonyms":[{"name":"sodium/chloride-dependent taurine transporter","type":"broad"}],"termid":"GO:0005369"}


id: GO:0034225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is deprived of zinc ions.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation (obsolete GO:0034225)","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter in response to zinc deficiency","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter in response to zinc ion limitation","type":"exact"}],"termid":"GO:0034225"}


id: PBO:0004241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane translocase Oxa102","termid":"PBO:0004241"}


id: MONDO:1010090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anotia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anotia, non-human animal","secondary_identifiers":["OMIA:001411"],"termid":"MONDO:1010090","xrefs":{"Monarch":{"xref_id":"1010090"}}}


id: PBO:0079660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 8","termid":"PBO:0079660"}


id: PBO:0056374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 1 pseudogene 2","termid":"PBO:0056374"}


id: GO:0061205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the paramesonephric duct over time, from its formation to the mature structure. Mullerian ducts (or paramesonephric ducts) are paired ducts of the embryo that run down the lateral sides of the urogenital ridge and terminate at the mullerian eminence in the primitive urogenital sinus. In the female, they will develop to form the fallopian tubes, uterus, cervix, and the upper portion of the vagina; in the male, they are lost. These ducts are made of tissue of mesodermal origin.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paramesonephric duct development","synonyms":[{"name":"Mullerian duct development","type":"exact"}],"termid":"GO:0061205"}


id: FYPO:0001160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition during stationary phase","synonyms":[{"name":"cell cycle arrest in mitotic G2 phase during stationary phase","type":"related"},{"name":"mitotic G2 phase arrest during stationary phase","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition during stationary phase","type":"exact"}],"termid":"FYPO:0001160"}


id: GO:0036321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of ghrelin from a cell. Ghrelin is a 28 amino acid hunger-stimulating peptide hormone.","definition_xrefs":["Wikipedia:Ghrelin","GOC:cjm","PMID:14610293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ghrelin secretion","synonyms":[{"name":"pancreatic ghrelin secretion","type":"narrow"}],"termid":"GO:0036321"}


id: MONDO:0017485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"femoral agenesis/hypoplasia","termid":"MONDO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"femoral agenesis/hypoplasia, bilateral","secondary_identifiers":["Orphanet:295067"],"synonyms":[{"name":"femoral intercalary meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017485","xrefs":{"Monarch":{"xref_id":"0017485"}}}


id: PBO:0033783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-reversed_RTS1_barrier_polarity","termid":"PBO:0033783"}


id: MONDO:0015591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete limbic encephalitis associated with antibodies to cell membrane antigens (obsolete MONDO:0015591)","secondary_identifiers":["Orphanet:163903"],"termid":"MONDO:0015591","xrefs":{"Monarch":{"xref_id":"0015591"}}}


id: MONDO:0015154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rickettsial disease (obsolete MONDO:0015154)","termid":"MONDO:0015154","xrefs":{"Monarch":{"xref_id":"0015154"}}}


id: GO:0044446
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular organelle part (obsolete GO:0044446)","termid":"GO:0044446"}


id: GO:0045865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of recombination within rDNA repeats (obsolete GO:0045865)","synonyms":[{"name":"regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0045865"}


id: GO:0016638
data:
  {"annotated_genes":["SJAG_02496","SJAG_03266","SJAG_03861","SJAG_04054","SJAG_01881","SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"},{"annotations":[72716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"},{"annotations":[71859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"},{"annotations":[74027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004375"},{"annotations":[114496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"},{"annotations":[59560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016639"},{"annotations":[75595,111575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004733"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.4.-.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null,"SJAG_02496":null,"SJAG_03266":null,"SJAG_03861":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016638","terms_by_termid":{"GO:0003884":null,"GO:0004354":null,"GO:0004375":null,"GO:0004733":null,"GO:0016040":null,"GO:0016639":null,"GO:0043799":null}}


id: PBO:0053101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 7A","termid":"PBO:0053101"}


id: PBO:0028517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_present_during_mitosis","termid":"PBO:0028517"}


id: GO:1903600
data:
  {"annotated_genes":["SJAG_00691","SJAG_00283"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78128,95249],"is_not":false,"summary":null,"term":"GO:1903600"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of glutaminase activity.","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","PMID:14764090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00691":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutaminase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Sno1p-Snz1p","type":"exact"}],"termid":"GO:1903600","terms_by_termid":{"GO:1903600":null}}


id: PBO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase pseudogene","termid":"PBO:0002480"}


id: MONDO:0007201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blepharophimosis, Ptosis, and Epicanthus Inversus syndrome (BPES) is an ophthalmic disorder characterized by blepharophimosis, ptosis, epicanthus inversus, and telecanthus, that can appear associated with (type I) or without premature ovarian failure (POF) (type II).","definition_xrefs":["Orphanet:126"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"telecanthus","termid":"MONDO:0008537"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"blepharophimosis, ptosis, and epicanthus inversus syndrome","secondary_identifiers":["MEDGEN:66312","SCTID:715391004","MESH:C562419","GARD:23","OMIM:110100","UMLS:C0220663","NORD:862","DOID:14778"],"synonyms":[{"name":"BPES","type":"exact"},{"name":"BPES type 1","type":"related"},{"name":"BPES with Duane retraction syndrome","type":"related"},{"name":"BPES with ovarian failure","type":"related"},{"name":"BPES with premature ovarian failure","type":"related"},{"name":"BPES without ovarian failure","type":"related"},{"name":"BPES, type 1","type":"related"},{"name":"BPES, type 2","type":"related"},{"name":"BPES, type I, autosomal recessive","type":"related"},{"name":"Blepharophimosis, Ptosis, Epicanthus Inversus Syndrome","type":"exact"},{"name":"blepharophimosis syndrome type 1","type":"related"},{"name":"blepharophimosis types 1 and 2","type":"exact"},{"name":"blepharophimosis, epicanthus inversus, and ptosis, type 1","type":"exact"},{"name":"blepharophimosis, epicanthus inversus, and ptosis, type 2","type":"exact"},{"name":"blepharophimosis, ptosis, and epicanthus inversus","type":"exact"},{"name":"blepharophimosis, ptosis, and epicanthus inversus syndrome","type":"exact"},{"name":"blepharophimosis, ptosis, and epicanthus inversus syndrome type 1","type":"related"},{"name":"blepharophimosis, ptosis, epicanthus inversus syndrome","type":"exact"},{"name":"blepharophimosis, ptosis, epicanthus inversus with ovarian failure","type":"related"},{"name":"blepharophimosis-epicanthus inversus-ptosis syndrome","type":"exact"}],"termid":"MONDO:0007201","xrefs":{"Monarch":{"xref_id":"0007201"}}}


id: PBO:0039844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 11B","termid":"PBO:0039844"}


id: GO:0110128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of unloading sucrose that is produced in the source tissues, from the sieve tube or companion cell of the phloem into the sink tissues.","definition_xrefs":["PMID:30018170","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transport","termid":"GO:0015770"},{"relation_name":"is_a","term_name":"phloem unloading","termid":"GO:0110127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phloem sucrose unloading","termid":"GO:0110128"}


id: PBO:0062405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 29 pseudogene","termid":"PBO:0062405"}


id: PBO:0063442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6D","termid":"PBO:0063442"}


id: MONDO:0003500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct carcinoma","termid":"MONDO:0005496"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"squamous cell bile duct carcinoma","secondary_identifiers":["MEDGEN:209017","UMLS:C0861861","DOID:5537","NCIT:C5777"],"synonyms":[{"name":"bile duct squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003500","xrefs":{"Monarch":{"xref_id":"0003500"}}}


id: PBO:0059674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 40","termid":"PBO:0059674"}


id: GO:0016989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of binding to a sigma factor and stopping, preventing or reducing the rate of its transcriptional activity.","definition_xrefs":["Wikipedia:Anti-sigma_factors","GOC:jl","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription corepressor activity","termid":"GO:0003714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003714"},{"rel_name":"is_a","termid":"GO:0003712"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0003712","GO:0003714","GO:0030674","GO:0140110"],"is_obsolete":false,"name":"sigma factor antagonist activity","synonyms":[{"name":"anti-sigma factor activity","type":"exact"}],"termid":"GO:0016989"}


id: PBO:0028270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028270"}


id: GO:0014740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hyperplasia.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hyperplasia","termid":"GO:0014738"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"negatively_regulates","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle hyperplasia","termid":"GO:0014740"}


id: PATO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000316 relative color value (obsolete PATO:0000316)","termid":"PATO:0000316"}


id: MONDO:1010479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arrhythmogenic right ventricular cardiomyopathy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy, non-human animal","termid":"MONDO:1010019"},{"relation_name":"is_a","term_name":"cardiomyopathy, domestic cat","termid":"MONDO:1010442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmogenic right ventricular cardiomyopathy, domestic cat","secondary_identifiers":["OMIA:000878-9685"],"termid":"MONDO:1010479","xrefs":{"Monarch":{"xref_id":"1010479"}}}


id: PR:Q9P3T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps502 gene.","definition_xrefs":["UniProtKB:Q9P3T6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.10c","synonyms":[{"name":"Spom972h-rps502","type":"exact"}],"termid":"PR:Q9P3T6"}


id: PBO:0073461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein B","termid":"PBO:0073461"}


id: PBO:0070412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPA3 pseudogene 2","termid":"PBO:0070412"}


id: GO:0019566
data:
  {"annotated_genes":["SJAG_02010","SJAG_04660","SJAG_03958"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94777,100938,95508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving arabinose, arabino-pentose. L-Arabinose occurs both free, for example in the heartwood of many conifers, and in the combined state, as a constituent of plant hemicelluloses, bacterial polysaccharides etc. D-arabinose is a constituent of arabinonucleosides.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"arabinose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arabinose metabolism","type":"exact"}],"termid":"GO:0019566","terms_by_termid":{"GO:0019568":null}}


id: PBO:0116710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily C member 1","termid":"PBO:0116710"}


id: PBO:0034112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_precedes","termid":"PBO:0034112"}


id: PBO:0089190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD family chromatin remodeller Hrp3","termid":"PBO:0089190"}


id: FYPO:0005049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin at RNA polymerase II promoters is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:20605454","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","termid":"FYPO:0005051"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin","termid":"FYPO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II promoter during nitrogen starvation","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II promoter during nitrogen depletion","type":"exact"},{"name":"decreased protein localization to chromatin at RNA pol II promoter during nitrogen starvation","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II promoter during nitrogen deprivation","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II promoter nitrogen starvation","type":"exact"}],"termid":"FYPO:0005049"}


id: GO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in kidney development","termid":"GO:0072111"}


id: GO:0010722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferrochelatase activity; catalysis of the reaction: protoporphyrin + Fe2+ = protoheme + 2 H+.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ferrochelatase activity","termid":"GO:0010722"}


id: GO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"RNA polymerase V is a multisubunit RNA polymerase complex found in the nucleus of plants and involved in accumulation of siRNAs and in DNA methylation-dependent silencing of endogenous repeated sequences. Pol V is composed of subunits that are paralogous or identical to the 12 subunits of Pol II. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The second largest subunit is also found in RNA polymerase IVa, while the largest subunit is found only in the IVa complex and contains an extended C-terminal domain (CTD) that includes multiple repeats of a 16 amino-acid consensus sequence as well as other sequences. The remainder of the complex is composed of smaller subunits.","definition_xrefs":["PMID:16140984","PMID:19110459","GOC:mtg_sensu","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase V complex","secondary_identifiers":["GO:0080137"],"synonyms":[{"name":"DNA-directed RNA polymerase IVb complex","type":"exact"},{"name":"DNA-directed RNA polymerase V complex","type":"exact"}],"termid":"GO:0000419"}


id: PBO:0068697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 78, pseudogene","termid":"PBO:0068697"}


id: PBO:0055946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 55","termid":"PBO:0055946"}


id: PBO:0079738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 4","termid":"PBO:0079738"}


id: PBO:0027605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_spindle_assembly","termid":"PBO:0027605"}


id: FYPO:0000801
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119034],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[119323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[119086,119178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[118939],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[119356],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119324,119198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119035],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cytoskeleton organization is abnormal.","definition_xrefs":["PMID:19713940","GO:0030036","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization during vegetative growth","termid":"FYPO:0001328"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization","termid":"FYPO:0004803"},{"relation_name":"is_a","term_name":"abnormal actin filament-based process","termid":"FYPO:0006306"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T 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pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild 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growth","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_04522","SJAG_02592","SJAG_04703","SJAG_04280","SJAG_03596","SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["rga4delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","for3delta","sty1delta","pom1delta"],"synonyms":[{"name":"abnormal actin cytoskeleton organisation during vegetative growth","type":"exact"},{"name":"abnormal actin cytoskeleton organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000801","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0058353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4726","termid":"PBO:0058353"}


id: PBO:0056250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein","termid":"PBO:0056250"}


id: GO:0047706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrobiochanin A + NADP+ = biochanin A + H+ + NADPH.","definition_xrefs":["EC:1.3.1.46","RHEA:12817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"biochanin-A reductase activity","secondary_identifiers":["KEGG_REACTION:R02954","MetaCyc:BIOCHANIN-A-REDUCTASE-RXN"],"synonyms":[{"name":"dihydrobiochanin-A:NADP+ delta2-oxidoreductase activity","type":"related"}],"termid":"GO:0047706"}


id: GO:0046543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the secondary female sexual characteristics over time, from their formation to the mature structures. In female humans, these include growth of axillary and pubic hair, breast development and menstrual periods. Their development occurs in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of secondary sexual characteristics","termid":"GO:0045136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of secondary female sexual characteristics","termid":"GO:0046543"}


id: GO:0047341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-L-fucose 1-phosphate + GTP + H+ = diphosphate + GDP-beta-L-fucose.","definition_xrefs":["RHEA:13549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fucose-1-phosphate guanylyltransferase activity","secondary_identifiers":["EC:2.7.7.30","KEGG_REACTION:R01951","MetaCyc:2.7.7.30-RXN","Reactome:R-HSA-6787533"],"synonyms":[{"name":"GDP fucose pyrophosphorylase activity","type":"related"},{"name":"GDP-L-fucose pyrophosphorylase activity","type":"related"},{"name":"GDP-fucose diphosphorylase activity","type":"related"},{"name":"GDP-fucose pyrophosphorylase activity","type":"related"},{"name":"GTP:L-fucose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:beta-L-fucose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:fucose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"guanosine diphosphate L-fucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0047341"}


id: GO:0022884
data:
  {"annotated_genes":["SJAG_00175","SJAG_02208","SJAG_00959","SJAG_03502","SJAG_03560","SJAG_00373","SJAG_04218","SJAG_05259","SJAG_02330","SJAG_01879","SJAG_04996","SJAG_01640","SJAG_02077","SJAG_03515","SJAG_03358"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69691,73290,73316,67735,105935,73007,78434,74924,73775,78900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[103037,107324,107345,104951,111547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a macromolecule from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00373":null,"SJAG_00959":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03358":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"macromolecule transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0022884","terms_by_termid":{"GO:0008320":null,"GO:0015450":null}}


id: GO:0042100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a B cell population by cell division. Follows B cell activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"},{"relation_name":"is_a","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell proliferation","secondary_identifiers":["GO:0042114"],"synonyms":[{"name":"B lymphocyte proliferation","type":"exact"},{"name":"B-cell proliferation","type":"exact"},{"name":"B-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042100"}


id: PBO:0074726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 81","termid":"PBO:0074726"}


id: MONDO:1011723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission encephalopathy, non-human animal","secondary_identifiers":["OMIA:002551"],"termid":"MONDO:1011723","xrefs":{"Monarch":{"xref_id":"1011723"}}}


id: PBO:0076810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM3 antisense transcript 1","termid":"PBO:0076810"}


id: FYPO:0002280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes a single round of cell division, and then dies.","definition_xrefs":["PomBase:jh","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single cell division","synonyms":[{"name":"inviable following spore germination, single cell division","type":"exact"},{"name":"inviable germinated spore, single cell division","type":"exact"},{"name":"lethal after spore germination, single cell division","type":"exact"}],"termid":"FYPO:0002280"}


id: PBO:0051737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 6 like","termid":"PBO:0051737"}


id: MONDO:0013394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porencephaly-microcephaly-bilateral congenital cataract syndrome","secondary_identifiers":["OMIM:613730","UMLS:C3151000","MEDGEN:462350","Orphanet:306547","GARD:17380"],"synonyms":[{"name":"HDBSCC","type":"related"},{"name":"hemorrhagic destruction of the brain, subependymal calcification, and cataracts","type":"related"},{"name":"porencephaly-microcephaly-bilateral congenital cataract syndrome","type":"exact"}],"termid":"MONDO:0013394","xrefs":{"Monarch":{"xref_id":"0013394"}}}


id: MONDO:0018985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete trench fever (obsolete MONDO:0018985)","termid":"MONDO:0018985","xrefs":{"Monarch":{"xref_id":"0018985"}}}


id: PBO:0080651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 G2 checkpoint kinase","termid":"PBO:0080651"}


id: MONDO:0012292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis C virus, susceptibility to","secondary_identifiers":["UMLS:C1835407","MEDGEN:322657","OMIM:609532"],"synonyms":[{"name":"HCV, resistance to","type":"related"},{"name":"HCV, susceptibility to","type":"related"},{"name":"Hepatitis C Virus infection, response to therapy of","type":"related"},{"name":"Hepatitis C Virus, resistance to","type":"related"},{"name":"hepatitis C virus, response to therapy of","type":"exact"},{"name":"hepatitis C virus, susceptibility to","type":"exact"}],"termid":"MONDO:0012292","xrefs":{"Monarch":{"xref_id":"0012292"}}}


id: PR:O43068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolin complex subunit mde4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.04","synonyms":[{"name":"Spom972h-mde4","type":"exact"},{"name":"mei4-dependent protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43068"}


id: PBO:0001230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein required for rRNA processing","termid":"PBO:0001230"}


id: MONDO:0001584
data:
  {"annotated_genes":["SJAG_04665","SJAG_06022","SJAG_04183","SJAG_04816","SJAG_04003","SJAG_02050","SJAG_02658","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"},{"annotations":[84903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[86304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[84936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[85306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[86119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[84898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[86190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[85832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02050":null,"SJAG_02658":null,"SJAG_04003":null,"SJAG_04183":null,"SJAG_04665":null,"SJAG_04816":null,"SJAG_06022":null},"genotype_count":0,"is_obsolete":false,"name":"ocular motility disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:14457","UMLS:C0028850","DOID:1279","SCTID:45030009","EFO:1001990","ICD9:378.9"],"synonyms":[{"name":"disorder of eye movements","type":"exact"},{"name":"eye movement disorder","type":"exact"}],"termid":"MONDO:0001584","terms_by_termid":{"MONDO:0009783":null,"MONDO:0010912":null,"MONDO:0012238":null,"MONDO:0013117":null,"MONDO:0014062":null,"MONDO:0014656":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0001584"}}}


id: GO:0033241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"regulates","term_name":"amine catabolic process","termid":"GO:0009310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amine catabolic process","synonyms":[{"name":"regulation of amine breakdown","type":"exact"},{"name":"regulation of amine catabolism","type":"exact"},{"name":"regulation of amine degradation","type":"exact"},{"name":"regulation of cellular amine catabolic process","type":"exact"}],"termid":"GO:0033241"}


id: PATO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A luminous flux quality inhering in a bearer by virtue of the bearer's emitting longer wavelength light following the absorption of shorter wavelength radiation; fluorescence is common with aromatic compounds with several rings joined together.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"luminous flux","termid":"PATO:0001296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescence","termid":"PATO:0000018"}


id: MOD:00695
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a sulfonyl group for the hydrogen atom of a hydroxyl or sulfanyl group.","definition_xrefs":["Unimod:40","DeltaMass:0","PubMed:14752058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfated residue","synonyms":[{"name":"O-Sulfonation","type":"related"},{"name":"SulfRes","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"Sulphonation (SO3H) (of PMC group)","type":"exact"}],"termid":"MOD:00695"}


id: GO:1905909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dauer entry.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:21531333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dauer larval development","termid":"GO:0061065"},{"relation_name":"regulates","term_name":"dauer entry","termid":"GO:0043053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dauer entry","synonyms":[{"name":"regulation of nematode entry into dormancy","type":"exact"}],"termid":"GO:1905909"}


id: GO:0009657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastid organization","synonyms":[{"name":"plastid organisation","type":"exact"},{"name":"plastid organization and biogenesis","type":"related"}],"termid":"GO:0009657"}


id: GO:0046505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sulfolipids, any compound containing a sulfonic acid residue joined by a carbon-sulfur bond to a lipid.","definition_xrefs":["PMID:9751667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sulfolipid metabolic process","synonyms":[{"name":"sulfolipid metabolism","type":"exact"},{"name":"sulpholipid metabolic process","type":"exact"},{"name":"sulpholipid metabolism","type":"exact"}],"termid":"GO:0046505"}


id: GO:0016256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of high-mannose N-glycans by UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase and the subsequent removal of the N-acetylglucosamine residues yielding mannose-6-P that occurs in the ER-Golgi apparatus to N-glycans destined for the lysosome.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycan processing","termid":"GO:0006491"},{"relation_name":"part_of","term_name":"protein targeting to lysosome","termid":"GO:0006622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006605"],"is_obsolete":false,"name":"N-glycan processing to lysosome","termid":"GO:0016256"}


id: PBO:0066718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 15","termid":"PBO:0066718"}


id: PBO:0091669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DUF1772 family protein, multimembrane spanning anthrone oxygenase-like","termid":"PBO:0091669"}


id: PBO:0028135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snoRNA_guided_rRNA_pseudouridine_synthesis_abolished_at_specific_site","termid":"PBO:0028135"}


id: GO:0097150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in by an organism or tissue maintains a population of neuronal stem cells.","definition_xrefs":["PMID:11399758","CL:0000047","GOC:dos","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal stem cell population maintenance","termid":"GO:0097150"}


id: MONDO:1011039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any oculocutaneous albinism that occurs in dogs due to a mutation in the SLC45A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, SLC45A2-related, dog","secondary_identifiers":["OMIA:001821-9615"],"synonyms":[{"name":"coat color albinism, oculocutaneous type IV, dog","type":"related"}],"termid":"MONDO:1011039","xrefs":{"Monarch":{"xref_id":"1011039"}}}


id: PBO:0088024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; required for U1 snRNP biogenesis; contains multiple tetriatricopeptide repeats","termid":"PBO:0088024"}


id: PBO:0068040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 345","termid":"PBO:0068040"}


id: PBO:0030752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcriptional_response_to_pheromone_at_increased_pheromone_level_(obsolete_FYPO:0000985)","termid":"PBO:0030752"}


id: MONDO:0006772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease VIII (obsolete MONDO:0006772)","termid":"MONDO:0006772","xrefs":{"Monarch":{"xref_id":"0006772"}}}


id: PBO:0042237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle progression 1","termid":"PBO:0042237"}


id: GO:0099158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transport or maintenance of location of a postsynaptic recycling endosome within the postsynapse.","definition_xrefs":["GOC:dos","PMID:20098723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"regulates","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of recycling endosome localization within postsynapse","termid":"GO:0099158"}


id: PR:Q02592
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family B member 6, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04872","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heavy metal tolerance protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.09c","secondary_identifiers":["UniProtKB:Q02592"],"synonyms":[{"name":"Spom972h-ABCB6","type":"exact"}],"termid":"PR:Q02592"}


id: MONDO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paralysis of all four limbs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quadriplegia","secondary_identifiers":["SCTID:11538006","ICD9:344.00","EFO:0009684","MESH:D011782","NCIT:C50721","UMLS:C0034372","ICD9:344.09","DOID:12835","MEDGEN:19617"],"synonyms":[{"name":"bilateral diplegia","type":"exact"},{"name":"tetraplegia","type":"exact"}],"termid":"MONDO:0001590","xrefs":{"Monarch":{"xref_id":"0001590"}}}


id: PBO:0047327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"failed axon connections homolog, metaxin like GST domain containing","termid":"PBO:0047327"}


id: MONDO:1012946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any skeletal dysplasia that occurs in dogs due to a mutation in the PCYT1A gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, PCYT1A-related, dog","secondary_identifiers":["OMIA:002606-9615"],"synonyms":[{"name":"SD3","type":"exact"},{"name":"disproportionate dwarfism","type":"related"},{"name":"skeletal dysplasia 3, PCYT1A-related, dog","type":"exact"},{"name":"skeletal dysplasia 3, dog","type":"related"}],"termid":"MONDO:1012946","xrefs":{"Monarch":{"xref_id":"1012946"}}}


id: PBO:0049166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 8","termid":"PBO:0049166"}


id: GO:1903502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of translation repressor activity.","definition_xrefs":["GOC:bhm","GO_REF:0000088","PMID:14723848","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"translation repressor complex","termid":"GO:1903502"}


id: GO:0008426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of protein kinase C, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase inhibitor activity","termid":"GO:0030291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772","GO:0030234","GO:0004857"],"is_obsolete":false,"name":"protein kinase C inhibitor activity","secondary_identifiers":["GO:0004863"],"synonyms":[{"name":"PKC inhibitor activity","type":"exact"},{"name":"diacylglycerol-activated phospholipid-dependent PKC inhibitor activity","type":"exact"},{"name":"diacylglycerol-activated phospholipid-dependent protein kinase C inhibitor activity","type":"exact"}],"termid":"GO:0008426"}


id: GO:0019605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any butyrate, the anions of butyric acid (butanoic acid), a saturated, unbranched aliphatic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"butyrate metabolic process","secondary_identifiers":["GO:0043437"],"synonyms":[{"name":"butanoic acid metabolic process","type":"exact"},{"name":"butanoic acid metabolism","type":"exact"},{"name":"butyrate metabolism","type":"exact"},{"name":"butyric acid metabolic process","type":"exact"},{"name":"butyric acid metabolism","type":"exact"}],"termid":"GO:0019605"}


id: PR:Q9P7H8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome-associated protein ECM29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome component ecm29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.01","secondary_identifiers":["UniProtKB:Q9P7H8"],"synonyms":[{"name":"SPAC1782.01","type":"related"},{"name":"Spom972h-ECM29","type":"exact"}],"termid":"PR:Q9P7H8"}


id: GO:1990245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of a phosphate group to a threonine residue at position 120 of the histone.","definition_xrefs":["PMID:24140421"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-T120 phosphorylation (obsolete GO:1990245)","synonyms":[{"name":"histone H2A phosphorylation at T120","type":"exact"},{"name":"histone H2AT120 phosphorylation","type":"exact"}],"termid":"GO:1990245"}


id: PBO:0065707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase 7 like","termid":"PBO:0065707"}


id: PBO:0064811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 1","termid":"PBO:0064811"}


id: PBO:0036325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic kinetochore protein (Meikin) Moa1","termid":"PBO:0036325"}


id: GO:0031697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-1 adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"beta-1 adrenergic receptor binding","synonyms":[{"name":"beta-1 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031697"}


id: GO:0102443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(1-) + a (2S)-2-hydroxycarboxylate = NADH(2-) + H+ + a 2-oxo carboxylate.","definition_xrefs":["EC:1.1.1.337","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-2-hydroxycarboxylate dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-13927","RHEA:34555"],"termid":"GO:0102443"}


id: PBO:0069413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 674, pseudogene","termid":"PBO:0069413"}


id: PBO:0065265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 25","termid":"PBO:0065265"}


id: MOD:01351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a nitrated L-tryptophan.","definition_xrefs":["OMSSA:85","PubMed:8839040","Unimod:354#W","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrosylation","termid":"MOD:00461"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated L-tryptophan","synonyms":[{"name":"Nitro","type":"related"},{"name":"Oxidation to nitro","type":"related"},{"name":"nitrow","type":"exact"}],"termid":"MOD:01351"}


id: PBO:0088167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40 repeat-containing subunit of Set3C histone deacetylase complex; complex represses early/middle sporulation genes; antagonizes telomeric silencing; binds specifically to the Sir4p N-terminus","termid":"PBO:0088167"}


id: MONDO:0015957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic movement disorder.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic movement disorder (obsolete MONDO:0015957)","secondary_identifiers":["Orphanet:183521"],"synonyms":[{"name":"rare genetic movement disorder","type":"exact"}],"termid":"MONDO:0015957","xrefs":{"Monarch":{"xref_id":"0015957"}}}


id: PBO:0069589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 863, pseudogene","termid":"PBO:0069589"}


id: GO:0099586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"release of sequestered calcium ion into postsynaptic cytosol","termid":"GO:0099586"}


id: PBO:0064497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A","termid":"PBO:0064497"}


id: PBO:0083016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dehydrogenase involved in ubiquinone and sphingolipid metabolism; converts 4-hydroxybenzaldehyde into 4-hydroxybenzoate for ubiquinone anabolism, hexadecenal to hexadecenoic acid in sphingosine 1-phosphate catabolism; human homolog ALDH3A2, mutated in Sjogren-Larsson syndrome, can rescue yeast hfd1 mutant; human ALDH3A1, but not ALDH3A2, rescues pABA- respiratory growth phenotype of hfd1 null; data suggest that dual functions of Hfd1p have diverged in human ALDH3A1, ALDH3A2","termid":"PBO:0083016"}


id: PBO:0066032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 1","termid":"PBO:0066032"}


id: PBO:0112608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol esterase/lipase implicated in lipid catabolism or detoxification","termid":"PBO:0112608"}


id: MONDO:0018305
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"}]},"cv_name":"mondo","definition":"Chronic granulomatous disease (CGD) is a rare primary immunodeficiency, mainly affecting phagocytes, which is characterized by an increased susceptibility to severe and recurrent bacterial and fungal infections, along with the development of granulomas.","definition_xrefs":["Orphanet:379"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"},{"relation_name":"excluded_subClassOf","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"is_a","term_name":"phagocyte bactericidal dysfunction","termid":"MONDO:0005910"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"chronic granulomatous disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:306400","NANDO:2200757","SCTID:387759001","MEDGEN:5377","NORD:968","UMLS:C0018203","GARD:6100","MedDRA:10008906","icd11.foundation:1329764681","MESH:D006105","NANDO:1200357","NCIT:C26788","DOID:3265"],"synonyms":[{"name":"Bridges-Good syndrome","type":"exact"},{"name":"CGD","type":"exact"},{"name":"Quie syndrome","type":"exact"},{"name":"chronic septic granulomatosis","type":"exact"},{"name":"congenital dysphagocytosis","type":"exact"},{"name":"granulomatous disease, chronic","type":"related"}],"termid":"MONDO:0018305","terms_by_termid":{"MONDO:0010600":null},"xrefs":{"Monarch":{"xref_id":"0018305"}}}


id: MONDO:0016689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of diffuse astrocytoma. It is characterized by the presence of a conspicuous, though variable, fraction of gemistocytic neoplastic astrocytes. Gemistocytes are round to oval astrocytes with abundant, glassy, non-fibrillary cytoplasm which appears to displace the dark, angulated nucleus to the periphery of the cell. To make the diagnosis of gemistocytic astrocytoma, gemistocytes should amount to more than approximately 20% of all tumor cells. (Adapted from WHO)","definition_xrefs":["NCIT:C4321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse astrocytoma","termid":"MONDO:0016686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gemistocytic astrocytoma","secondary_identifiers":["Orphanet:251604","UMLS:C0334581","ICDO:9411/3","GARD:20709","DOID:7005","MEDGEN:87269"],"synonyms":[{"name":"Gemistocytoma","type":"exact"},{"name":"gemistocytic astrocytic tumor","type":"exact"},{"name":"gemistocytic astrocytic tumour","type":"exact"},{"name":"gemistocytic astrocytoma","type":"exact"},{"name":"gemistocytic astrocytoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0016689","xrefs":{"Monarch":{"xref_id":"0016689"}}}


id: GO:0006187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGTP, deoxyguanosine triphosphate (2'-deoxyguanosine 5'-triphosphate) from other compounds, including gGDP, deoxyguanosine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dGDP metabolic process","termid":"GO:0046066"},{"relation_name":"is_a","term_name":"dGTP biosynthetic process","termid":"GO:0046071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dGTP biosynthetic process from dGDP","synonyms":[{"name":"dGTP anabolism from dGDP","type":"exact"},{"name":"dGTP formation from dGDP","type":"exact"},{"name":"dGTP synthesis from dGDP","type":"exact"}],"termid":"GO:0006187"}


id: FYPO:0006716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which chromosomes segregate equally (i.e. normally), but the nuclear envelope is not distributed equally between daughter nuclei. As a result, the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:mah","PomBase:jh","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large and small daughter nuclei","termid":"FYPO:0006715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"large and small daughter nuclei, with unequal nuclear envelope distribution","synonyms":[{"name":"large and small daughter nuclei, with unequal nuclear envelope and equal mitotic sister chromatid segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal nuclear envelope distribution, during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei, with unequal nuclear envelope distribution, during vegetative growth","type":"exact"},{"name":"large and small daughter nuclei, with unequal nuclear envelope partitioning","type":"exact"}],"termid":"FYPO:0006716"}


id: PBO:0004070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase (predicted)","termid":"PBO:0004070"}


id: PATO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue of the bearer's indirect development, undergoing metamorphosis.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Larval"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"larval","termid":"PATO:0001185"}


id: GO:0009767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring as part of photosynthesis, in which light provides the energy for a series of electron carriers to operate together to transfer electrons and generate a transmembrane electrochemical gradient.","definition_xrefs":["ISBN:0198547684","GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transport chain","termid":"GO:0022900"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthetic electron transport chain","secondary_identifiers":["GO:0009776","GO:0009775","GO:0009774"],"synonyms":[{"name":"electron carrier, chlorophyll electron transport system","type":"exact"},{"name":"photosynthetic electron transport in cytochrome b6/f","type":"narrow"},{"name":"photosynthetic electron transport in plastocyanin","type":"narrow"},{"name":"photosynthetic electron transport in plastoquinone","type":"narrow"}],"termid":"GO:0009767"}


id: PBO:0074158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F2","termid":"PBO:0074158"}


id: PBO:0003469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase homolog Chs2","termid":"PBO:0003469"}


id: PBO:0113743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 6","termid":"PBO:0113743"}


id: GO:0047969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + H2O + O2 = H2O2 + H+ + oxalate.","definition_xrefs":["RHEA:14837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glyoxylate oxidase activity","secondary_identifiers":["EC:1.2.3.5","KEGG_REACTION:R00466","MetaCyc:GLYOXYLATE-OXIDASE-RXN","Reactome:R-HSA-389862"],"synonyms":[{"name":"glyoxylate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047969"}


id: PBO:0063321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentriolar material 1","termid":"PBO:0063321"}


id: PBO:0068743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 6, pseudogene","termid":"PBO:0068743"}


id: PBO:0080151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VHL binding protein 1","termid":"PBO:0080151"}


id: PBO:0055889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit E","termid":"PBO:0055889"}


id: PBO:0031538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_molecular_function","termid":"PBO:0031538"}


id: FYPO:0004424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein threonine phosphorylation (obsolete FYPO:0004424)","synonyms":[{"name":"increased peptidyl-threonine phosphorylation","type":"exact"},{"name":"increased threonine phosphorylation","type":"exact"}],"termid":"FYPO:0004424"}


id: GO:0140113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and secretion of a set of components to form an extracellular microvesicule, a membrane-bounded vesicle that ranges in size 100 nm to 1 micron in size) and exits the cell by budding.","definition_xrefs":["PMID:28736435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle biogenesis","termid":"GO:0140112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"extracellular microvesicle biogenesis","synonyms":[{"name":"extracellular microvesicle assembly","type":"related"}],"termid":"GO:0140113"}


id: PBO:0074650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 40","termid":"PBO:0074650"}


id: GO:0070427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 1 (NOD1) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["PMID:18585455","GOC:add","PMID:17944960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"NOD1 signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070427"}


id: MONDO:0018532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenocarcinoma of liver and intrahepatic biliary tract (obsolete MONDO:0018532)","secondary_identifiers":["Orphanet:424943"],"synonyms":[{"name":"adenocarcinoma of liver and IBT","type":"exact"},{"name":"adenocarcinoma of the liver and IBT","type":"exact"},{"name":"adenocarcinoma of the liver and intrahepatic biliary tract","type":"exact"}],"termid":"MONDO:0018532","xrefs":{"Monarch":{"xref_id":"0018532"}}}


id: GO:0009045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-xylose = alpha-D-xylulofuranose.","definition_xrefs":["RHEA:22816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xylose isomerase activity","secondary_identifiers":["EC:5.3.1.5","MetaCyc:XYLISOM-RXN"],"synonyms":[{"name":"D-xylose aldose-ketose-isomerase activity","type":"related"},{"name":"D-xylose isomerase activity","type":"related"},{"name":"D-xylose ketoisomerase activity","type":"related"},{"name":"D-xylose ketol-isomerase activity","type":"related"}],"termid":"GO:0009045"}


id: PBO:0090745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBC28E12.04 ortholog, syntenic position","termid":"PBO:0090745"}


id: MONDO:0010542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dilated cardiomyopathy in which the cause of the disease is a mutation in the DMD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of dystrophin","termid":"MONDO:0016147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 3B","secondary_identifiers":["DOID:0060561","OMIM:302045","DOID:0081164","DOID:0110461","UMLS:C3668940","MESH:C580047","MEDGEN:777148","SCTID:702424003","GARD:15287","ICD9:425.4"],"synonyms":[{"name":"CMD3B","type":"exact"},{"name":"DMD dilated cardiomyopathy","type":"exact"},{"name":"DMD-related dilated cardiomyopathy","type":"related"},{"name":"X-linked dilated cardiomyopathy","type":"related"},{"name":"cardiomyopathy, dilated, 3B","type":"related"},{"name":"cardiomyopathy, dilated, X-linked","type":"related"},{"name":"cardiomyopathy, dilated, type 3B","type":"exact"},{"name":"dilated cardiomyopathy 3B","type":"exact"},{"name":"dilated cardiomyopathy caused by mutation in DMD","type":"exact"},{"name":"dilated cardiomyopathy type 3B","type":"exact"}],"termid":"MONDO:0010542","xrefs":{"Monarch":{"xref_id":"0010542"}}}


id: PBO:0060492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nanos C2HC-type zinc finger 3","termid":"PBO:0060492"}


id: PBO:0062679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily L member 1","termid":"PBO:0062679"}


id: MOD:00609
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pierce EZ-Link Biotin-HPDP","synonyms":[{"name":"Biotin-HPDP","type":"related"},{"name":"Pierce EZ-Link Biotin-HPDP","type":"related"}],"termid":"MOD:00609"}


id: MONDO:1011073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Francois's langur.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Francois's langur","secondary_identifiers":["OMIA:001033-54180"],"termid":"MONDO:1011073","xrefs":{"Monarch":{"xref_id":"1011073"}}}


id: MONDO:1012604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in pigs in which there is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000403-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, pig","termid":"MONDO:1010842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, pig","synonyms":[{"name":"gangliosidosis, GM2, generic, pig","type":"related"}],"termid":"MONDO:1012604","xrefs":{"Monarch":{"xref_id":"1012604"}}}


id: MONDO:1010976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease, non-human animal","termid":"MONDO:1010231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, Rhesus monkey","secondary_identifiers":["OMIA:000485-9544"],"termid":"MONDO:1010976","xrefs":{"Monarch":{"xref_id":"1010976"}}}


id: PBO:0046569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 11","termid":"PBO:0046569"}


id: PBO:0087539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein phosphatase PP4 complex; Pph3p and Psy2p form the active complex, Psy4p may provide additional substrate specificity; regulates recovery from the DNA damage checkpoint, the gene conversion- and single-strand annealing-mediated pathways of meiotic double-strand break repair and efficient Non-Homologous End-Joining (NHEJ) pathway; Pph3p and Psy2p localize to foci on meiotic chromosomes; putative homolog of mammalian R3","termid":"PBO:0087539"}


id: SO:0001098
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with magnesium ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_magnesium_ion_contact_site","secondary_identifiers":["BS:00187"],"synonyms":[{"name":"Mg_contact_site","type":"exact"},{"name":"polypeptide magnesium ion contact site","type":"exact"}],"termid":"SO:0001098"}


id: PBO:0051474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-64 (pseudogene)","termid":"PBO:0051474"}


id: MONDO:0100187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A constipation disorder caused by use of opioids. OIC may present immediately when a patient takes the opioid, or it may present gradually during opioid therapy.","direct_ancestors":[{"relation_name":"is_a","term_name":"constipation disorder","termid":"MONDO:0002203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"opioid-induced constipation","secondary_identifiers":["MEDGEN:1641995","UMLS:C3160897"],"synonyms":[{"name":"OIC","type":"exact"}],"termid":"MONDO:0100187","xrefs":{"Monarch":{"xref_id":"0100187"}}}


id: MONDO:0011608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis that is associated with variation in the region 13q12-q14.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","DOID:0110101","PMID:11069631"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 5","secondary_identifiers":["MEDGEN:381292","OMIM:605844","MESH:C565280","UMLS:C1853900"],"synonyms":[{"name":"ATOD5","type":"exact"},{"name":"atopic dermatitis 5","type":"exact"},{"name":"atopic dermatitis type 5","type":"exact"},{"name":"dermatitis, ATOPIC, 5","type":"related"},{"name":"dermatitis, atopic, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0011608","xrefs":{"Monarch":{"xref_id":"0011608"}}}


id: PBO:0087073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L36A; N-terminally acetylated; binds to 5.8 S rRNA; homologous to mammalian ribosomal protein L36, no bacterial homolog; RPL36A has a paralog, RPL36B, that arose from the whole genome duplication","termid":"PBO:0087073"}


id: PBO:0004744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta Nda3","termid":"PBO:0004744"}


id: GO:0060380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of binding to single-stranded telomeric DNA.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of single-stranded telomeric DNA binding (obsolete GO:0060380)","synonyms":[{"name":"regulation of telomeric ssDNA binding","type":"exact"}],"termid":"GO:0060380"}


id: MONDO:0019863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acro-renal-ocular syndrome (obsolete MONDO:0019863)","termid":"MONDO:0019863","xrefs":{"Monarch":{"xref_id":"0019863"}}}


id: PBO:0086238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that is required for vacuolar H+-ATPase (V-ATPase) function; peripheral membrane protein; not an actual component of the V-ATPase complex; functions in the assembly of the V-ATPase; localized to the yeast endoplasmic reticulum (ER)","termid":"PBO:0086238"}


id: GO:0140224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that regulates Arp2/3 complex-mediated actin nucleation.","definition_xrefs":["GOC:lnp","PMID:22973053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SLAC complex","termid":"GO:0140224"}


id: GO:0033862
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80195],"is_not":false,"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UMP = ADP + UDP.","definition_xrefs":["EC:2.7.4.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP/dUMP kinase activity","termid":"GO:0009041"},{"relation_name":"is_a","term_name":"nucleoside monophosphate kinase activity","termid":"GO:0050145"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UMP kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:24400","MetaCyc:2.7.4.22-RXN"],"synonyms":[{"name":"ATP:UMP phosphotransferase activity","type":"related"},{"name":"PyrH","type":"related"},{"name":"SmbA","type":"related"},{"name":"UMP-kinase activity","type":"related"},{"name":"UMPK","type":"related"},{"name":"uridine monophosphate kinase activity","type":"related"}],"termid":"GO:0033862","terms_by_termid":{"GO:0033862":null}}


id: PBO:0071239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 80","termid":"PBO:0071239"}


id: MONDO:0003122
data:
  {"annotated_genes":["SJAG_01236","SJAG_02274"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010080"},{"annotations":[85894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014889"}]},"cv_name":"mondo","definition":"A progressive neurodegenerative disorder caused by a disruption in the connection between the striatum and the substantia nigra. It is a type of multiple system atrophy (MSA). Signs and symptoms include rigidity, instability, impaired speech, and slow movements.","definition_xrefs":["NCIT:C125695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01236":null,"SJAG_02274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"striatonigral degeneration","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:195535779","OMIMPS:271930","MESH:D020955","UMLS:C0270733","ICD9:333.0","DOID:4751","MEDGEN:124366","SCTID:29618004","ICD10CM:G23.2"],"termid":"MONDO:0003122","terms_by_termid":{"MONDO:0010080":null,"MONDO:0014889":null},"xrefs":{"Monarch":{"xref_id":"0003122"}}}


id: MONDO:0009857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent Mullerian duct syndrome (PMDS) is a rare disorder of sex development (DSD) characterized by the persistence of Müllerian derivatives, the uterus and/or fallopian tubes, in otherwise normally virilized boys.","definition_xrefs":["Orphanet:2856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphroditism","termid":"MONDO:0005518"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent Mullerian duct syndrome","secondary_identifiers":["SCTID:702358005","MEDGEN:342367","icd11.foundation:697796373","ICD9:752.89","MESH:C536665","OMIM:261550","UMLS:C1849930","DOID:0050791","NCIT:C120188","GARD:8435"],"synonyms":[{"name":"PMDS","type":"exact"},{"name":"female genital ducts in otherwise normal Male","type":"related"},{"name":"female genital ducts in otherwise normal male","type":"related"},{"name":"hernia uteri inguinale","type":"related"},{"name":"persistent MULLERIAN duct syndrome, types I and II","type":"related"},{"name":"persistent Muellerian duct syndrome","type":"exact"},{"name":"persistent Mullerian derivatives","type":"exact"},{"name":"persistent Mullerian duct syndrome","type":"exact"},{"name":"persistent Müllerian derivatives","type":"exact"},{"name":"persistent Müllerian duct syndrome","type":"related"},{"name":"persistent mullerian duct syndrome, type I","type":"exact"},{"name":"persistent mullerian duct syndrome, type II","type":"exact"},{"name":"persistent mullerian duct syndrome, types 1 and 2","type":"related"},{"name":"persistent oviduct syndrome","type":"related"},{"name":"pseudohermaphroditism, Male internal","type":"related"}],"termid":"MONDO:0009857","xrefs":{"Monarch":{"xref_id":"0009857"}}}


id: GO:0070468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release by odontoblasts of the extracellular matrix constituents, including collagen, that form the basis of dentin.","definition_xrefs":["GOC:mah","PMID:12856968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix constituent secretion","termid":"GO:0070278"},{"relation_name":"part_of","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"dentin extracellular matrix secretion","synonyms":[{"name":"dentin secretion","type":"related"},{"name":"dentine secretion","type":"related"},{"name":"predentin secretion","type":"related"}],"termid":"GO:0070468"}


id: MONDO:0003151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete movement disease (obsolete MONDO:0003151)","termid":"MONDO:0003151","xrefs":{"Monarch":{"xref_id":"0003151"}}}


id: FYPO:0004372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the mitotic G2 DNA damage checkpoint is decreased. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah","GO:0072435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased response to mitotic G2 DNA damage checkpoint signaling","synonyms":[{"name":"decreased G2 DNA damage checkpoint during mitotic cell cycle","type":"related"},{"name":"decreased mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"reduced response to mitotic G2 DNA damage checkpoint signaling","type":"exact"}],"termid":"FYPO:0004372"}


id: PBO:0011411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_occurs_at","termid":"PBO:0011411"}


id: PBO:0089861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex subunit, ATP-dependent RNA helicase Fal1 (conflicting process, human yeast)","termid":"PBO:0089861"}


id: PBO:0056741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meteorin, glial cell differentiation regulator","termid":"PBO:0056741"}


id: PBO:0073022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol carrier protein 2","termid":"PBO:0073022"}


id: GO:1901022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-hydroxyphenylacetate.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"4-hydroxyphenylacetate metabolic process","synonyms":[{"name":"4-hydroxyphenylacetate metabolism","type":"exact"}],"termid":"GO:1901022"}


id: MONDO:1012717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal dystrophy that occurs in the Bengal breed of domestic cats characterized as early-onset primary photoreceptor disorder that leads to blindness within the ﬁrst year of age.","definition_xrefs":["PMID:21923821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal dystrophy, domestic cat","termid":"MONDO:1012243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset retinal dystrophy, Bengal, domestic cat","secondary_identifiers":["OMIA:001613-9685"],"termid":"MONDO:1012717","xrefs":{"Monarch":{"xref_id":"1012717"}}}


id: GO:0070941
data:
  {"annotated_genes":["SJAG_02707","SJAG_02338","SJAG_04227","SJAG_02626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69560,71212,103628,117587],"is_not":false,"summary":null,"term":"GO:0070941"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an eisosome, a cell part that is composed of the eisosome membrane and eisosome filaments. The eisosome membrane, also called the MCC domain, is a furrow-like plasma membrane sub-domain with associated integral transmembrane proteins. The eisosome filaments form a scaffolding lattice on the cytoplasmic face of the membrane.","definition_xrefs":["GOC:al","GOC:jp","GOC:mah","PMID:19564405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02338":null,"SJAG_02626":null,"SJAG_02707":null,"SJAG_04227":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"eisosome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070941","terms_by_termid":{"GO:0070941":null}}


id: GO:0048537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of mucosal-associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosa-associated lymphoid tissue development","synonyms":[{"name":"BALT development","type":"narrow"},{"name":"GALT development","type":"narrow"},{"name":"NALT development","type":"narrow"},{"name":"bronchial-associated lymphoid tissue development","type":"narrow"},{"name":"gut-associated lymphoid tissue development","type":"narrow"},{"name":"mucosal-associated lymphoid tissue development","type":"exact"},{"name":"nasopharyngeal-associated lymphoid tissue development","type":"narrow"}],"termid":"GO:0048537"}


id: PBO:0030584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_arginine_level","termid":"PBO:0030584"}


id: PBO:0013051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Fhl1","termid":"PBO:0013051"}


id: PATO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved or tilted such that the tip points upwards.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upturned","termid":"PATO:0002031"}


id: PBO:0054404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1800","termid":"PBO:0054404"}


id: PBO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds Homol D","termid":"PBO:0002158"}


id: _global:imports
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"Holds between p and c when p is a transportation or localization process and the outcome of this process is to move c to a destination that is part of some s, where the start location of c is part of the region that surrounds s.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"transports","termid":"_global:transports"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imports","secondary_identifiers":["GOREL:0000034","RO:0002340"],"termid":"_global:imports"}


id: PR:O74959
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinol dehydrogenase 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C736.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.13","secondary_identifiers":["UniProtKB:O74959"],"synonyms":[{"name":"Spom972h-RDH13","type":"exact"}],"termid":"PR:O74959"}


id: MOD:01043
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a p-nitrobenzyl group for the hydrogen atom of a carboxyl group.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p-nitrobenzyl ester modified residue","synonyms":[{"name":"ONb","type":"exact"}],"termid":"MOD:01043"}


id: PBO:0034715
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage-hair hypoplasia","termid":"PBO:0034715"}


id: PR:O94444
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01888","PANTHER:PTHR10223:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.10c","secondary_identifiers":["UniProtKB:O94444"],"synonyms":[{"name":"Spom972h-PSMD4","type":"exact"}],"termid":"PR:O94444"}


id: PBO:0053679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 865","termid":"PBO:0053679"}


id: PBO:0057035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 129-1","termid":"PBO:0057035"}


id: GO:0046929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a neurotransmitter.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter transport","termid":"GO:0051589"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of neurotransmitter secretion","synonyms":[{"name":"conotoxin activity","type":"narrow"},{"name":"down regulation of neurotransmitter secretion","type":"exact"},{"name":"down-regulation of neurotransmitter secretion","type":"exact"},{"name":"downregulation of neurotransmitter secretion","type":"exact"},{"name":"inhibition of neurotransmitter secretion","type":"narrow"}],"termid":"GO:0046929"}


id: MONDO:0014910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the TTC25 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 35","secondary_identifiers":["OMIM:617092","UMLS:C4310721","DOID:0110620","GARD:16188","MEDGEN:934688"],"synonyms":[{"name":"CILD35","type":"exact"},{"name":"TTC25 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 35","type":"exact"},{"name":"ciliary dyskinesia, primary, 35, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 35","type":"exact"},{"name":"primary ciliary dyskinesia 35 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in TTC25","type":"exact"},{"name":"primary ciliary dyskinesia type 35","type":"exact"}],"termid":"MONDO:0014910","xrefs":{"Monarch":{"xref_id":"0014910"}}}


id: PBO:0057959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3681","termid":"PBO:0057959"}


id: GO:1990127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of osmotic stress, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis","GOC:krc","PMID:16571598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:0008627"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1990127"}


id: RO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite-of relationship in which the host is a plant and the parasite that attaches to the host stem (PO:0009047)","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_parasite_of","termid":"RO:0002235"}


id: PBO:0082273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AN1-type zinc finger protein, effector of proteotoxic stress response; stress-inducible transcriptional target of Rpn4p; induced by nitrogen limitation, weak acid, misfolded proteins; short-lived protein, degraded by proteasome; may protect cells from trivalent metalloid induced proteotoxicity; contains PACE promoter element; ortholog of human AIRAP, which stimulates proteasome activity in response to arsenic; protein abundance increases under DNA replication stress","termid":"PBO:0082273"}


id: GO:0045548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine = NH4 + trans-cinnamate.","definition_xrefs":["RHEA:21384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylalanine ammonia-lyase activity","secondary_identifiers":["EC:4.3.1.24"],"synonyms":[{"name":"L-phenylalanine ammonia-lyase activity","type":"related"},{"name":"PAL activity","type":"broad"},{"name":"phe ammonia-lyase activity","type":"related"},{"name":"phenylalanine ammonium-lyase activity","type":"related"},{"name":"phenylalanine deaminase activity","type":"related"}],"termid":"GO:0045548"}


id: GO:0036360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sorocarp stalk is generated and organized. The sorocarp stalk is a tubular structure that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["DDANAT:0000068","GOC:pf","PMID:22902739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"sorocarp stalk development","termid":"GO:0031150"},{"relation_name":"part_of","term_name":"sorocarp morphogenesis","termid":"GO:0031288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp stalk morphogenesis","synonyms":[{"name":"fruiting body stalk morphogenesis","type":"broad"}],"termid":"GO:0036360"}


id: PBO:0060216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVP divergent transcript","termid":"PBO:0060216"}


id: MONDO:0044345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by Schistosoma mansoni.","definition_xrefs":["NCIT:C35002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schistosomiasis","termid":"MONDO:0015254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schistosoma mansoni infectious disease","secondary_identifiers":["SCTID:750009","MESH:D012555"],"synonyms":[{"name":"Schistosoma mansoni caused disease or disorder","type":"exact"},{"name":"Schistosoma mansoni disease or disorder","type":"exact"},{"name":"Schistosoma mansoni infection","type":"exact"}],"termid":"MONDO:0044345","xrefs":{"Monarch":{"xref_id":"0044345"}}}


id: PR:O42878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.01c gene.","definition_xrefs":["UniProtKB:O42878","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invertase C8E11.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.01c","synonyms":[{"name":"Saccharase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC8E11.01c","type":"exact"},{"name":"beta-fructofuranosidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42878"}


id: PBO:0044396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 56, pseudogene","termid":"PBO:0044396"}


id: PR:P78860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA methyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03720","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.15c","secondary_identifiers":["UniProtKB:P78860"],"synonyms":[{"name":"21S rRNA (uridine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ2","type":"exact"}],"termid":"PR:P78860"}


id: GO:0018045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-lysine amide by hydrolysis and oxidation of an interior Lys-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0092"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-lysine amidation (obsolete GO:0018045)","termid":"GO:0018045"}


id: PBO:0049374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 4","termid":"PBO:0049374"}


id: PBO:0109404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 31, pseudogene","termid":"PBO:0109404"}


id: MONDO:0019372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary bone cyst is a benign non-epithelial bone cavity that is asymptomatic and that is found most commonly in the second decade of life by chance. The long bones are most often affected, but cases involving the jaw bone have been reported.","definition_xrefs":["Orphanet:83468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solitary bone cyst","secondary_identifiers":["NCIT:C2904","ICD9:733.21","UMLS:C0005937","ICD10CM:M85.4","MEDGEN:2696","SCTID:203467005","icd11.foundation:987501456","MESH:D001845","GARD:19039"],"synonyms":[{"name":"bone cyst","type":"exact"},{"name":"cyst of bone","type":"exact"},{"name":"cyst of the bone","type":"exact"},{"name":"simple bone cyst","type":"exact"},{"name":"solitary cyst","type":"exact"},{"name":"unicameral bone cyst","type":"exact"}],"termid":"MONDO:0019372","xrefs":{"Monarch":{"xref_id":"0019372"}}}


id: MONDO:0030309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"Leber hereditary optic neuropathy, autosomal recessive","secondary_identifiers":["OMIMPS:619382","UMLS:C5543589","MEDGEN:1786310"],"synonyms":[{"name":"LHONAR","type":"exact"},{"name":"Leber hereditary optic neuropathy, autosomal recessive","type":"exact"}],"termid":"MONDO:0030309","xrefs":{"Monarch":{"xref_id":"0030309"}}}


id: GO:0036123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 dimethylation (obsolete GO:0036123)","synonyms":[{"name":"histone H3 K9 dimethylation","type":"exact"},{"name":"histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:0036123"}


id: PBO:0070147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 61 pseudogene","termid":"PBO:0070147"}


id: GO:1905477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to membrane.","definition_xrefs":["PMID:26911690","GO_REF:0000058","GOC:bc","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"positively_regulates","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to membrane","synonyms":[{"name":"activation of protein localisation in membrane","type":"narrow"},{"name":"activation of protein localization in membrane","type":"narrow"},{"name":"activation of protein localization to membrane","type":"narrow"},{"name":"positive regulation of protein localisation in membrane","type":"exact"},{"name":"positive regulation of protein localization in membrane","type":"exact"},{"name":"up regulation of protein localisation in membrane","type":"exact"},{"name":"up regulation of protein localization in membrane","type":"exact"},{"name":"up regulation of protein localization to membrane","type":"exact"},{"name":"up-regulation of protein localisation in membrane","type":"exact"},{"name":"up-regulation of protein localization in membrane","type":"exact"},{"name":"up-regulation of protein localization to membrane","type":"exact"},{"name":"upregulation of protein localisation in membrane","type":"exact"},{"name":"upregulation of protein localization in membrane","type":"exact"},{"name":"upregulation of protein localization to membrane","type":"exact"}],"termid":"GO:1905477"}


id: PBO:0071558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 23","termid":"PBO:0071558"}


id: PBO:0053764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1007","termid":"PBO:0053764"}


id: PBO:0017703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cardiolipin-specific phospholipase Cld1 (predicted)","termid":"PBO:0017703"}


id: PBO:0007182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase","termid":"PBO:0007182"}


id: PBO:0067027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 40, pseudogene","termid":"PBO:0067027"}


id: PBO:0052855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-12","termid":"PBO:0052855"}


id: MONDO:0010108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor arising from the testis. Representative examples include teratoma, seminoma, embryonal carcinoma, and yolk sac tumor.","definition_xrefs":["NCIT:C8591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal germ cell tumor","termid":"MONDO:0018202"},{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular germ cell tumor","secondary_identifiers":["DOID:5557","Orphanet:363504","MESH:C563236","GARD:13047","ICD9:239.5","EFO:1000566","OMIM:273300","UMLS:C1336708","MEDGEN:277809","SCTID:713577007"],"synonyms":[{"name":"Male germ cell tumor","type":"related"},{"name":"Male germ cell tumour","type":"related"},{"name":"TGCT","type":"exact"},{"name":"embryonal cell carcinoma","type":"related"},{"name":"endodermal sinus tumor","type":"related"},{"name":"endodermal sinus tumour","type":"related"},{"name":"germ cell neoplasm of testis","type":"exact"},{"name":"germ cell neoplasm of the testis","type":"exact"},{"name":"germ cell tumor of testis","type":"exact"},{"name":"germ cell tumor of the testis","type":"exact"},{"name":"germ cell tumors, somatic","type":"exact"},{"name":"germ cell tumour of testis","type":"exact"},{"name":"germ cell tumour of the testis","type":"exact"},{"name":"male germ cell tumor, somatic","type":"exact"},{"name":"nonseminomatous germ cell tumors","type":"related"},{"name":"nonseminomatous germ cell tumours","type":"related"},{"name":"seminoma","type":"related"},{"name":"spermatocytic seminoma","type":"related"},{"name":"spermatocytic seminoma, somatic","type":"exact"},{"name":"teratoma, testicular","type":"related"},{"name":"testicular germ cell cancer","type":"related"},{"name":"testicular germ cell neoplasm","type":"exact"},{"name":"testicular germ cell neoplasms","type":"exact"},{"name":"testicular germ cell tumor","type":"exact"},{"name":"testicular tumor, somatic","type":"exact"},{"name":"testis germ cell tumor","type":"exact"},{"name":"testis germ cell tumour","type":"exact"}],"termid":"MONDO:0010108","xrefs":{"Monarch":{"xref_id":"0010108"}}}


id: PBO:0080981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 16","termid":"PBO:0080981"}


id: GO:0006854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP/ADP exchange (obsolete GO:0006854)","synonyms":[{"name":"ATP/ADP exchange","type":"exact"}],"termid":"GO:0006854"}


id: FYPO:0005521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome organization is abnormal. Nucleosome organization results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes.","definition_xrefs":["PomBase:mah","GO:0034728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleosome organization","synonyms":[{"name":"abnormal nucleosome organisation","type":"exact"},{"name":"abnormal nucleosome organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome organization during vegetative growth","type":"exact"}],"termid":"FYPO:0005521"}


id: PBO:0063631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 9","termid":"PBO:0063631"}


id: PBO:0086197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; detected in highly purified mitochondria in high-throughput studies; predicted to be involved in ribosome biogenesis","termid":"PBO:0086197"}


id: GO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["GOC:add","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"positive regulation of antimicrobial humoral response","termid":"GO:0002760"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"positively_regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antimicrobial peptide production","synonyms":[{"name":"activation of antimicrobial peptide production","type":"narrow"},{"name":"antimicrobial peptide induction","type":"exact"},{"name":"stimulation of antimicrobial peptide production","type":"narrow"},{"name":"up regulation of antimicrobial peptide production","type":"exact"},{"name":"up-regulation of antimicrobial peptide production","type":"exact"},{"name":"upregulation of antimicrobial peptide production","type":"exact"}],"termid":"GO:0002225"}


id: GO:0036437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An Isw1 complex that binds DNA and has nucleosome-stimulated ATPase activity. In S. cerevisiae, contains an Isw1p ATPase subunit in complex with Ioc2p and Ioc4p.","definition_xrefs":["GOC:jd","PMID:12482963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Isw1 complex","termid":"GO:0016587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"Isw1b complex","termid":"GO:0036437"}


id: PBO:0070698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 2","termid":"PBO:0070698"}


id: PATO:0000607
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000607 relative angle value (obsolete PATO:0000607)","termid":"PATO:0000607"}


id: PBO:0071069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 71","termid":"PBO:0071069"}


id: MONDO:0020764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brown-Pearce carcinoma","secondary_identifiers":["EFO:1001278","MESH:D002284"],"synonyms":[{"name":"Brown-Pearce carcinoma","type":"exact"},{"name":"Brown-Pearce epithelioma","type":"exact"},{"name":"Brown-Pearce tumor","type":"exact"},{"name":"Brown-Pearce tumour","type":"exact"},{"name":"carcinoma, Brown Pearce","type":"exact"},{"name":"carcinoma, Brown-Pearce","type":"exact"},{"name":"epithelioma, Brown Pearce","type":"exact"},{"name":"epithelioma, Brown-Pearce","type":"exact"}],"termid":"MONDO:0020764","xrefs":{"Monarch":{"xref_id":"0020764"}}}


id: GO:0000962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving catabolism in the mitochondrion of RNA transcribed from the mitochondrial genome.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial RNA catabolic process","termid":"GO:0000960"},{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"positively_regulates","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial RNA catabolic process","termid":"GO:0000962"}


id: GO:2000738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of stem cell differentiation","termid":"GO:2000736"},{"relation_name":"positively_regulates","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stem cell differentiation","termid":"GO:2000738"}


id: PBO:0046603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 5","termid":"PBO:0046603"}


id: GO:0001895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function.","definition_xrefs":["GOC:add","GOC:tb","PMID:15365173","PMID:15365178","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina homeostasis","termid":"GO:0001895"}


id: PBO:0069168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 420, pseudogene","termid":"PBO:0069168"}


id: PBO:0069933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1226, pseudogene","termid":"PBO:0069933"}


id: PBO:0057510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 628","termid":"PBO:0057510"}


id: PBO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Srw1","termid":"PBO:0002630"}


id: PBO:0071141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 4","termid":"PBO:0071141"}


id: PBO:0051503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IK cytokine","termid":"PBO:0051503"}


id: GO:0010886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of cholesterol storage. Cholesterol storage is the accumulation and maintenance in cells or tissues of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid storage","termid":"GO:0010884"},{"relation_name":"is_a","term_name":"regulation of cholesterol storage","termid":"GO:0010885"},{"relation_name":"positively_regulates","term_name":"cholesterol storage","termid":"GO:0010878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol storage","synonyms":[{"name":"positive regulation of cholesterol sequestration","type":"narrow"}],"termid":"GO:0010886"}


id: GO:1902830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:21730158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"negatively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spinal cord association neuron differentiation","synonyms":[{"name":"down regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"downregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"downregulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"inhibition of spinal cord association neuron differentiation","type":"narrow"},{"name":"inhibition of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"negative regulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902830"}


id: GO:1902749
data:
  {"annotated_genes":["SJAG_02098","SJAG_00318","SJAG_04394","SJAG_01205","SJAG_03942","SJAG_01855","SJAG_01010","SJAG_03073","SJAG_01146","SJAG_03927","SJAG_02332","SJAG_02074","SJAG_02392","SJAG_03309","SJAG_00117","SJAG_00600","SJAG_03048","SJAG_00214","SJAG_02266","SJAG_03592","SJAG_01680","SJAG_01873","SJAG_03026","SJAG_01000","SJAG_02592","SJAG_00082","SJAG_05373","SJAG_02858","SJAG_02576","SJAG_04140","SJAG_01456","SJAG_03854","SJAG_01837","SJAG_03486","SJAG_04332","SJAG_04597","SJAG_00364","SJAG_03695","SJAG_03160","SJAG_01605","SJAG_02563","SJAG_03067","SJAG_04671","SJAG_01901","SJAG_01044","SJAG_00883","SJAG_00526","SJAG_00216","SJAG_00256","SJAG_04287","SJAG_06592","SJAG_04280","SJAG_01805","SJAG_01118","SJAG_02342","SJAG_03126","SJAG_02771","SJAG_01429","SJAG_04486","SJAG_02723","SJAG_03602","SJAG_00640","SJAG_01076","SJAG_01084"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91193,106372,115801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[89756,100295,115747,94168,101192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[116544,100296,117018,98952,93725,106375,70875,72017,115803,91194,116845,109068,78625,111781,79199,99119,74570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[95607,94299,98185,115749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[100297,88880,117454,72015,89974,116759,91195,91557,79062,99121,100807,106376,111476,109069,75019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[111183,94128,100752,106407,111567,108327,114213,78260,93333,104254,92690,112225,92983,106771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[78264,70368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[103244,94131,93565,98759,106990,110094,91901,70683,91497,87818,94170,108329,110950,87809,73333,101511,116227,116415,98186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[101142,87612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[73338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[71252,111712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010389"}]},"cv_name":"biological_process","definition":"Any signaling pathway that modulates the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"regulates","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01456":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_01901":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02342":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04486":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cell cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8852276"],"termid":"GO:1902749","terms_by_termid":{"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0033315":null,"GO:0044878":null,"GO:0110031":null,"GO:0110032":null,"GO:1905287":null}}


id: GO:0045741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor-activated receptor activity","termid":"GO:0007176"},{"relation_name":"is_a","term_name":"positive regulation of protein tyrosine kinase activity","termid":"GO:0061098"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of epidermal growth factor-activated receptor activity","synonyms":[{"name":"activation of epidermal growth factor receptor activity","type":"narrow"},{"name":"positive regulation of EGF receptor activity","type":"exact"},{"name":"positive regulation of EGFR activity","type":"exact"},{"name":"positive regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"stimulation of epidermal growth factor receptor activity","type":"narrow"},{"name":"up regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"upregulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0045741"}


id: PBO:0063954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate 4-kinase type 2 gamma","termid":"PBO:0063954"}


id: PBO:0034167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-interaction_relation_helper_property","termid":"PBO:0034167"}


id: GO:1905793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a pericentriolar material.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","PMID:21694707","PMID:24385583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to pericentriolar material","synonyms":[{"name":"protein localisation in pericentriolar material","type":"exact"},{"name":"protein localisation to pericentriolar material","type":"exact"},{"name":"protein localization in pericentriolar material","type":"exact"}],"termid":"GO:1905793"}


id: PBO:0061756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"out at first homolog","termid":"PBO:0061756"}


id: SOFP:organism
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"The name of the organism","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organism","termid":"SOFP:organism"}


id: GO:0009475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete high-molecular-weight cytochrome c (hexadecaheme) (obsolete GO:0009475)","synonyms":[{"name":"high-molecular-weight cytochrome c (hexadecaheme)","type":"exact"}],"termid":"GO:0009475"}


id: FYPO:0001277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MCM complex assembly is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal MCM complex assembly","termid":"FYPO:0000448"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished MCM complex assembly","synonyms":[{"name":"MCM complex assembly abolished","type":"exact"},{"name":"abolished MCM complex assembly during mitotic cell cycle","type":"related"},{"name":"abolished MCM complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001277"}


id: PBO:0091826
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae POL2","termid":"PBO:0091826"}


id: GO:0015707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitrite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nitrite transport","termid":"GO:0015707"}


id: GO:0140930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-fructose(out) + Na+(out) = D-fructose(in) + Na+(in).","definition_xrefs":["PMID:23451068","PMID:22212718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fructose:sodium symporter activity","termid":"GO:0140930"}


id: PBO:0000516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity protein kinase Lkh1","termid":"PBO:0000516"}


id: FYPO:0005487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased iron-sulfur cluster binding","synonyms":[{"name":"decreased iron-sulphur cluster binding","type":"exact"},{"name":"reduced iron-sulfur cluster binding","type":"exact"}],"termid":"FYPO:0005487"}


id: PATO:0002464
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of some aspect of the bearer extending past the position of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extends beyond","termid":"PATO:0002464"}


id: PBO:0052655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 23","termid":"PBO:0052655"}


id: PBO:0073650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of IKBKE 1","termid":"PBO:0073650"}


id: PBO:0068899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 141, pseudogene","termid":"PBO:0068899"}


id: GO:1902167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["PMID:17719541","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902231"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902255"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"activation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"activation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"}],"termid":"GO:1902167"}


id: MONDO:0859208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hengel-Maroofian-Schols syndrome","secondary_identifiers":["MEDGEN:1794242","UMLS:C5562032","OMIM:619641","DOID:0070408"],"termid":"MONDO:0859208","xrefs":{"Monarch":{"xref_id":"0859208"}}}


id: PBO:0084537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p14.5 protein family; functionally complements Mmf1p function when targeted to mitochondria; heat shock inducible; high-dosage growth inhibitor; forms a homotrimer in vitro; HMF1 has a paralog, MMF1, that arose from the whole genome duplication","termid":"PBO:0084537"}


id: MONDO:0012503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of thiopurine S-methyltransferase activity.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiopurine metabolic disease","termid":"MONDO:0000210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thiopurine S-methyltransferase deficiency","secondary_identifiers":["DOID:0080172","icd11.foundation:1916778396","MESH:C536512","SCTID:238012003","NCIT:C4389","Orphanet:3315","UMLS:C0342801","MEDGEN:83352","OMIM:610460"],"synonyms":[{"name":"6-mercaptopurine sensitivity","type":"related"},{"name":"THPM1","type":"related"},{"name":"TPMT deficiency","type":"exact"},{"name":"Thiopurines, poor metabolism of","type":"related"},{"name":"Thiopurines, poor metabolism of, 1","type":"related"},{"name":"inborn error of thiopurine S-methyltransferase activity","type":"exact"},{"name":"inborn thiopurine S-methyltransferase activity disorder","type":"exact"},{"name":"poor metabolism of thiopurines-1","type":"exact"},{"name":"rare inborn error of thiopurine S-methyltransferase activity","type":"exact"},{"name":"thiopurine S methyltranferase deficiency","type":"related"},{"name":"thiopurine S-methyltransferase deficiency","type":"exact"},{"name":"thiopurine methyltransferase deficiency","type":"related"},{"name":"thiopurines, poor metabolism of, 1","type":"related"}],"termid":"MONDO:0012503","xrefs":{"Monarch":{"xref_id":"0012503"}}}


id: MONDO:0015078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastroenteropancreatic neuroendocrine neoplasm (obsolete MONDO:0015078)","termid":"MONDO:0015078","xrefs":{"Monarch":{"xref_id":"0015078"}}}


id: PBO:0080252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 15 pseudogene","termid":"PBO:0080252"}


id: GO:1904407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nitric oxide metabolic process.","definition_xrefs":["PMID:11991626","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"positively_regulates","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric oxide metabolic process","synonyms":[{"name":"activation of nitric oxide metabolic process","type":"narrow"},{"name":"activation of nitric oxide metabolism","type":"narrow"},{"name":"positive regulation of nitric oxide metabolism","type":"exact"},{"name":"up regulation of nitric oxide metabolic process","type":"exact"},{"name":"up regulation of nitric oxide metabolism","type":"exact"},{"name":"up-regulation of nitric oxide metabolic process","type":"exact"},{"name":"up-regulation of nitric oxide metabolism","type":"exact"},{"name":"upregulation of nitric oxide metabolic process","type":"exact"},{"name":"upregulation of nitric oxide metabolism","type":"exact"}],"termid":"GO:1904407"}


id: PBO:0062227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AZ member 1 pseudogene","termid":"PBO:0062227"}


id: GO:0019168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-(all-trans-polyprenyl)phenol + NADPH + O2 + H+ = a 3-(all-trans-polyprenyl)benzene-1,2-diol + NADP+ + H2O.","definition_xrefs":["RHEA:55892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-polyprenylphenol 6-hydroxylase activity","secondary_identifiers":["EC:1.14.13.240","MetaCyc:RXN-18459"],"synonyms":[{"name":"2-octaprenylphenol hydroxylase activity","type":"narrow"}],"termid":"GO:0019168"}


id: PR:Q9Y7K7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Golgi apparatus membrane protein TVP23 homolog C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03490","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apparatus membrane protein tvp23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.05c","secondary_identifiers":["UniProtKB:Q9Y7K7"],"synonyms":[{"name":"Spom972h-TVP23C","type":"exact"}],"termid":"PR:Q9Y7K7"}


id: MONDO:0005370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete interstitial lung disease (obsolete MONDO:0005370)","termid":"MONDO:0005370","xrefs":{"Monarch":{"xref_id":"0005370"}}}


id: GO:0097572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two nuclei found in Giardia species (trophozoite stage). It is located on the right side of the cell when viewed from the dorsal side.","definition_xrefs":["GOC:giardia","ISBN:0-444-81258-X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"right nucleus","termid":"GO:0097572"}


id: MONDO:0024417
data:
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id: GO:0070030
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id: MOD:01484
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id: PBO:0003565
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id: PBO:0055342
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id: GO:0050277
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id: GO:0043368
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id: GO:0046103
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id: GO:1902810
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id: FYPO:0005815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the perinuclear region of the cytoplasm is abnormal during mitotic nuclear division.","definition_xrefs":["GO:1905719","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to perinuclear region of cytoplasm during mitotic interphase","synonyms":[{"name":"abnormal protein localisation to perinuclear region of cytoplasm during mitotic interphase","type":"exact"},{"name":"abnormal protein localization to perinuclear region of cytoplasm during interphase during vegetative growth","type":"exact"},{"name":"abnormal protein localization to perinuclear region of cytoplasm during interphase of mitotic cell cycle","type":"exact"},{"name":"protein localisation to nuclear region during mitotic interphase","type":"related"},{"name":"protein localization to nuclear region during mitotic interphase","type":"related"}],"termid":"FYPO:0005815"}


id: FYPO:0001173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to form a 2,2,7-trimethylguanosine cap structure is abolished.","definition_xrefs":["GO:0036261","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal 7-methylguanosine cap hypermethylation","termid":"FYPO:0001172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished 7-methylguanosine cap hypermethylation","synonyms":[{"name":"2,2,7-trimethylguanosine cap formation abolished","type":"exact"},{"name":"7-methylguanosine cap hypermethylation abolished","type":"exact"},{"name":"7-methylguanosine cap hypermethylation abolished during vegetative growth","type":"exact"},{"name":"TMG cap formation abolished","type":"exact"},{"name":"abolished 7-methylguanosine cap hypermethylation during mitotic cell cycle","type":"related"},{"name":"conversion of m(7)G to m(3)G abolished","type":"exact"},{"name":"snRNA capping abolished","type":"narrow"},{"name":"snoRNA capping abolished","type":"narrow"}],"termid":"FYPO:0001173"}


id: PR:O74315
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- amo1 gene.","definition_xrefs":["UniProtKB:O74315","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin-like protein amo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.10c","synonyms":[{"name":"Spom972h-amo1","type":"exact"},{"name":"aberrant microtubule protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74315"}


id: PBO:0113129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eukaryotic translation elongation factor 2 (eEF2, EF-2); also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT2 has a paralog, EFT1, that arose from the whole genome duplication","termid":"PBO:0113129"}


id: GO:0070417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cold","synonyms":[{"name":"cellular response to cold stress","type":"exact"}],"termid":"GO:0070417"}


id: MONDO:0024666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of epithelial skin neoplasm without malignant characteristics.","definition_xrefs":["MONDO:patterns/benign"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"epithelial skin neoplasm","termid":"MONDO:0021634"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign epithelial skin neoplasm","secondary_identifiers":["UMLS:C0345981","MEDGEN:83395","NCIT:C7341"],"synonyms":[{"name":"benign epithelial skin neoplasm","type":"exact"},{"name":"benign epithelial skin tumor","type":"exact"},{"name":"benign epithelial skin tumour","type":"exact"},{"name":"benign skin epithelium neoplasm","type":"exact"},{"name":"benign skin epithelium tumor","type":"exact"},{"name":"benign skin epithelium tumour","type":"exact"},{"name":"epithelial skin neoplasm, benign","type":"exact"}],"termid":"MONDO:0024666","xrefs":{"Monarch":{"xref_id":"0024666"}}}


id: PBO:0088203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn2Cys6 family transcription factor; positively regulates sterol uptake under anaerobic conditions with SUT1; represses filamentation-inducing genes during non-starvation conditions; positively regulates mating along with SUT1 by repressing the expression of genes (PRR2, NCE102 and RHO5) which function as mating inhibitors; multicopy suppressor of mutations that cause low activity of the cAMP/PKA pathway; SUT2 has a paralog, SUT1, that arose from the whole genome duplication","termid":"PBO:0088203"}


id: PBO:0074544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SND1 intronic transcript 1","termid":"PBO:0074544"}


id: GO:0033969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(L-gamma-glutamylamino)butanoate + H2O = 4-aminobutanoate + L-glutamate.","definition_xrefs":["EC:3.5.1.94","RHEA:19737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"gamma-glutamyl-gamma-aminobutyrate hydrolase activity","secondary_identifiers":["MetaCyc:RXN0-3942","KEGG_REACTION:R07419"],"synonyms":[{"name":"4-(glutamylamino)butanoate amidohydrolase activity","type":"related"},{"name":"PuuD","type":"related"},{"name":"YcjL","type":"related"},{"name":"gamma-glutamyl-GABA hydrolase activity","type":"related"}],"termid":"GO:0033969"}


id: GO:0010657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.","definition_xrefs":["CL:0000187","GOC:dph","GOC:mtg_apoptosis","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell apoptotic process","synonyms":[{"name":"muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010657"}


id: GO:0014702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the sarcoplasmic reticulum membrane that contains calcium pumps and is devoted to calcium uptake. The free sarcoplasmic reticulum membrane consists of the longitudinal sarcoplasmic reticulum membrane and the non-junctional region of the terminal cisterna membrane.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005789","GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"free sarcoplasmic reticulum membrane","termid":"GO:0014702"}


id: PBO:0079364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 5, pseudogene","termid":"PBO:0079364"}


id: GO:1901093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein homotetramerization.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"is_a","term_name":"regulation of protein tetramerization","termid":"GO:1901090"},{"relation_name":"regulates","term_name":"protein homotetramerization","termid":"GO:0051289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of protein homotetramerization","synonyms":[{"name":"regulation of protein homotetramer assembly","type":"exact"},{"name":"regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"regulation of protein homotetramer formation","type":"exact"}],"termid":"GO:1901093"}


id: PBO:0047363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 17","termid":"PBO:0047363"}


id: MONDO:0005834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with the organism Mycobacterium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlamydia trachomatis infectious disease","termid":"MONDO:0005701"},{"relation_name":"is_a","term_name":"granuloma inguinale","termid":"MONDO:0005777"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphogranuloma venereum","secondary_identifiers":["MEDGEN:44221","MESH:D008219","EFO:0007353","ICD9:099.1","SCTID:186946009","UMLS:C0024286","DOID:13819","NCIT:C26822"],"synonyms":[{"name":"Durand-Nicolas-Favre disease","type":"exact"},{"name":"LGV","type":"related"},{"name":"Poradenitis inguinale","type":"exact"},{"name":"climatic or tropical bubo","type":"exact"},{"name":"lymph granuloma inguinale","type":"exact"},{"name":"lymphogranuloma inguinale","type":"exact"},{"name":"strumous bubo","type":"exact"}],"termid":"MONDO:0005834","xrefs":{"Monarch":{"xref_id":"0005834"}}}


id: GO:0021736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the globose nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:curators","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"globose nucleus development","termid":"GO:0021736"}


id: PBO:0048288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin like peptide","termid":"PBO:0048288"}


id: MONDO:1012410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined deficiency of factors IX and XII, non-human animal","termid":"MONDO:1011701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined deficiency of factors IX and XII, domestic cat","secondary_identifiers":["OMIA:001526-9685"],"termid":"MONDO:1012410","xrefs":{"Monarch":{"xref_id":"1012410"}}}


id: PBO:0034478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_single-stranded_telomeric_DNA_binding","termid":"PBO:0034478"}


id: GO:0070211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone deacetylase complex that is part of the chromatin remodeling machinery. In Saccharomyces cerevisiae this complex contains Snt2p, Ecm5p and Rpd3p.","definition_xrefs":["GOC:rb","PMID:19040720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005694","GO:0005654"],"is_obsolete":false,"name":"Snt2C complex","termid":"GO:0070211"}


id: GO:0019308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dTDP-mannose, a substance composed of mannose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"dTDP-mannose metabolic process","termid":"GO:0046371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dTDP-mannose biosynthetic process","synonyms":[{"name":"dTDP-mannose anabolism","type":"exact"},{"name":"dTDP-mannose biosynthesis","type":"exact"},{"name":"dTDP-mannose formation","type":"exact"},{"name":"dTDP-mannose synthesis","type":"exact"}],"termid":"GO:0019308"}


id: PBO:0077106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 10","termid":"PBO:0077106"}


id: FYPO:0000346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which spores have an abnormally low volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell","termid":"FYPO:0000023"},{"relation_name":"is_a","term_name":"abnormal spore morphology","termid":"FYPO:0000348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"small spores","synonyms":[{"name":"decreased spore size","type":"exact"},{"name":"reduced spore size","type":"exact"}],"termid":"FYPO:0000346"}


id: PBO:0015684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name derivation, Eighteen Interacting Centromere protein","termid":"PBO:0015684"}


id: FYPO:0000841
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119065],"is_not":false,"summary":null,"term":"FYPO:0000841"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium dodecyl sulfate (SDS). Cells stop growing (and may die) at a concentration of SDS that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":1,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to sodium dodecyl sulfate","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266"],"single_locus_genotype_uniquenames":["atf1delta"],"synonyms":[{"name":"hypersensitive to sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to SDS","type":"exact"},{"name":"sensitive to sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to sodium dodecyl sulphate","type":"exact"}],"termid":"FYPO:0000841","terms_by_termid":{"FYPO:0000841":null,"FYPO_EXT:0000001":null}}


id: GO:0180000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a histone methyltransferase.","definition_xrefs":["PMID:30923826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0140678","GO:0098772","GO:0004857"],"is_obsolete":false,"name":"histone methyltransferase inhibitor activity","termid":"GO:0180000"}


id: GO:0103080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(3-methylthiopropyl)malate(2-) = 3-(3'-methylthio)propylmalate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiopropylmalate isomerase activity (obsolete GO:0103080)","termid":"GO:0103080"}


id: GO:0032023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic processing of trypsinogen to the active form, trypsin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zymogen activation","termid":"GO:0031638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"trypsinogen activation","synonyms":[{"name":"cleavage of trypsinogen to trypsin","type":"exact"}],"termid":"GO:0032023"}


id: PBO:0086231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with CCT (chaperonin containing TCP-1) complex; has a role in actin and tubulin folding; has weak similarity to phosducins, which are G-protein regulators","termid":"PBO:0086231"}


id: GO:0060767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}


id: PBO:0084453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit; forms a complex with regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Csh1p; SUR1 has a paralog, CSH1, that arose from the whole genome duplication","termid":"PBO:0084453"}


id: GO:0060793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the sweat gland placode forms. An sweat gland placode is a thickening of the ectoderm that will give rise to the sweat gland bud.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"sweat gland development","termid":"GO:0060792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sweat gland placode formation","termid":"GO:0060793"}


id: MONDO:0013498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation of SHANK3 on chromosome 22q13.33.","definition_xrefs":["DOID:0070091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 15","secondary_identifiers":["MEDGEN:462730","OMIM:613950","UMLS:C3151380"],"synonyms":[{"name":"SCZD15","type":"exact"},{"name":"schizophrenia 15","type":"exact"},{"name":"schizophrenia 15 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility locus, chromosome 22Q13-related","type":"related"},{"name":"schizophrenia type 15","type":"exact"}],"termid":"MONDO:0013498","xrefs":{"Monarch":{"xref_id":"0013498"}}}


id: PBO:0063338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 3","termid":"PBO:0063338"}


id: GO:0018718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxyphenanthrene + UDP-glucose = 2-hydroxy-1-phenanthryl-beta-D-glucopyranoside + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-phenanthrene glycosyltransferase activity (obsolete GO:0018718)","termid":"GO:0018718"}


id: PBO:0044251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWC25 spliceosome associated protein homolog","termid":"PBO:0044251"}


id: GO:1904229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of succinate dehydrogenase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000059","GOC:rl","PMID:18160053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of succinate dehydrogenase activity","synonyms":[{"name":"regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"regulation of fumarate reductase activity","type":"exact"},{"name":"regulation of fumaric hydrogenase activity","type":"exact"},{"name":"regulation of succinate oxidoreductase activity","type":"exact"},{"name":"regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"regulation of succinic dehydrogenase activity","type":"broad"},{"name":"regulation of succinodehydrogenase activity","type":"exact"},{"name":"regulation of succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:1904229"}


id: FYPO:0004367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the mitotic spindle is normal (i.e. indistinguishable from wild type). Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"normal mitotic spindle","termid":"FYPO:0001399"},{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic spindle assembly","synonyms":[{"name":"normal mitotic spindle assembly during vegetative growth","type":"exact"},{"name":"normal mitotic spindle formation","type":"exact"},{"name":"normal spindle assembly during mitotic cell cycle","type":"related"},{"name":"normal spindle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0004367"}


id: GO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Antagonizes the ribosome-mediated translation of mRNA into a polypeptide via direct binding (through a selective and non-covalent interaction) to nucleic acid.","definition_xrefs":["GOC:vw","GOC:clt","PMID:7523370","PMID:29061112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation repressor activity","termid":"GO:0030371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0045182"}],"interesting_parent_ids":["GO:0003674","GO:0045182"],"is_obsolete":false,"name":"mRNA regulatory element binding translation repressor activity","secondary_identifiers":["Reactome:R-HSA-5690886"],"synonyms":[{"name":"translation repressor activity, mRNA regulatory element binding","type":"exact"},{"name":"translation repressor activity, nucleic acid binding","type":"broad"}],"termid":"GO:0000900"}


id: MONDO:0004500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma originating from the apical lung. Most superior sulcus lung carcinomas are bronchogenic carcinomas. This carcinoma may be associated with Pancoast syndrome. lt is also known as Pancoast tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant superior sulcus neoplasm","termid":"MONDO:0006883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung superior sulcus carcinoma","secondary_identifiers":["UMLS:C1336529","NCIT:C7779","DOID:8208","MEDGEN:234910"],"synonyms":[{"name":"superior sulcus carcinoma of lung","type":"related"},{"name":"superior sulcus carcinoma of the lung","type":"exact"},{"name":"superior sulcus lung carcinoma","type":"exact"}],"termid":"MONDO:0004500","xrefs":{"Monarch":{"xref_id":"0004500"}}}


id: PBO:0083571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF NDC1/YML031W","termid":"PBO:0083571"}


id: PBO:0108594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG2 AAA ATPase homolog B","termid":"PBO:0108594"}


id: GO:0044591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of amylopectin stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amylopectin","termid":"GO:0044591"}


id: PBO:0011072
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in archaea","termid":"PBO:0011072"}


id: PBO:0040449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10B (putative)","termid":"PBO:0040449"}


id: GO:2000852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of corticosterone secretion","termid":"GO:2000852"}


id: PBO:0069819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1105, pseudogene","termid":"PBO:0069819"}


id: PBO:0088575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3245 nucleolar protein, conserved in fungi and plant family","termid":"PBO:0088575"}


id: PBO:0043158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 26","termid":"PBO:0043158"}


id: PBO:0047016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A19","termid":"PBO:0047016"}


id: PBO:0071840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 35","termid":"PBO:0071840"}


id: FYPO:0002400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during mitotic interphase in which all detectable microtubules are present in a single bundle.","definition_xrefs":["PomBase:mlr","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002399"],"is_obsolete":false,"name":"single microtubule bundle during mitotic interphase","synonyms":[{"name":"single MT bundle during mitotic interphase","type":"exact"},{"name":"single microtubule array during mitotic interphase","type":"exact"}],"termid":"FYPO:0002400"}


id: MONDO:0008336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterygium colli, isolated","secondary_identifiers":["MEDGEN:356780","OMIM:177990","UMLS:C1867442","MESH:C566741"],"synonyms":[{"name":"pterygium colli, isolated","type":"exact"}],"termid":"MONDO:0008336","xrefs":{"Monarch":{"xref_id":"0008336"}}}


id: MONDO:0017499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital absence of both forearm and hand, bilateral is a rare developmental defect during embryogenesis characterized by a bilateral, transverse absence of the radius and ulna (of varying terminal lengths), as well as all the elements composing the hand.","definition_xrefs":["Orphanet:295095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital absence of both forearm and hand","termid":"MONDO:0017443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both forearm and hand, bilateral","secondary_identifiers":["MEDGEN:1843505","UMLS:C2910270","icd11.foundation:1524444518","ICD10CM:Q71.23"],"synonyms":[{"name":"radio-ulnar terminal transverse meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017499","xrefs":{"Monarch":{"xref_id":"0017499"}}}


id: GO:0048544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell recognition process in which pollen is recognized and either accepted or rejected by cells in the stigma.","definition_xrefs":["GOC:dph","GOC:tb","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"recognition of pollen","secondary_identifiers":["GO:0009857"],"synonyms":[{"name":"pollen recognition","type":"exact"},{"name":"recognition or rejection of self pollen","type":"related"},{"name":"self incompatibility","type":"related"}],"termid":"GO:0048544"}


id: PBO:0079162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 31","termid":"PBO:0079162"}


id: MONDO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the soft palate.","definition_xrefs":["NCIT:C3529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oropharynx cancer","termid":"MONDO:0004608"},{"relation_name":"is_a","term_name":"palatal neoplasm","termid":"MONDO:0005286"},{"relation_name":"is_a","term_name":"oral cavity cancer","termid":"MONDO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"soft palate cancer","secondary_identifiers":["ICD10CM:C05.1","ICD9:145.3","MEDGEN:57552","SCTID:363388009","UMLS:C0153376","DOID:8578"],"synonyms":[{"name":"cancer of soft palate","type":"exact"},{"name":"malignant neoplasm of soft palate","type":"exact"},{"name":"malignant neoplasm of the soft palate","type":"exact"},{"name":"malignant soft palate neoplasm","type":"exact"},{"name":"malignant soft palate tumor","type":"exact"},{"name":"malignant soft palate tumour","type":"exact"},{"name":"malignant tumor of soft palate","type":"exact"},{"name":"malignant tumor of the soft palate","type":"exact"},{"name":"malignant tumour of soft palate","type":"exact"},{"name":"malignant tumour of the soft palate","type":"exact"},{"name":"soft palate cancer","type":"exact"}],"termid":"MONDO:0004611","xrefs":{"Monarch":{"xref_id":"0004611"}}}


id: PBO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.71","termid":"PBO:0002641"}


id: GO:1990414
data:
  {"annotated_genes":["SJAG_01067","SJAG_04039","SJAG_00796","SJAG_03926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69605,72074,74828,75022],"is_not":false,"summary":null,"term":"GO:1990414"}]},"cv_name":"biological_process","definition":"The repair of a replication-born double-strand DNA break in which the DNA molecule is repaired using the homologous sequence of the sister chromatid which serves as a template to repair the breaks.","definition_xrefs":["PMID:12820977","PMID:16888651","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00796":null,"SJAG_01067":null,"SJAG_03926":null,"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"replication-born double-strand break repair via sister chromatid exchange","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"replication-born DSB repair by SCE","type":"exact"}],"termid":"GO:1990414","terms_by_termid":{"GO:1990414":null}}


id: MOD:00539
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod 179 merged wth Unimod 447 remap to ??? modification from Unimod O-linked glycosylation","definition_xrefs":["Unimod:182"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00539 threonine reduced to aminobutynate (obsolete MOD:00539)","termid":"MOD:00539"}


id: PBO:0053061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA associated with SART3 regulation of splicing","termid":"PBO:0053061"}


id: GO:0006889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the concentration of calcium in the endoplasmic reticulum.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium in ER (obsolete GO:0006889)","synonyms":[{"name":"regulation of calcium in ER","type":"exact"}],"termid":"GO:0006889"}


id: PATO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viviparous organism that has given birth five or more times.","definition_xrefs":["wiki:http://en.wikipedia.org/wiki/Parity_(biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiparous","termid":"PATO:0002369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grand multi[arous","termid":"PATO:0002372"}


id: GO:0019889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pteridine, pyrazino(2,3-dipyrimidine), the parent structure of pterins and the pteroyl group.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pteridine metabolic process","synonyms":[{"name":"pteridine metabolism","type":"exact"}],"termid":"GO:0019889"}


id: PBO:0005186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase (predicted)","termid":"PBO:0005186"}


id: PBO:0042591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 4","termid":"PBO:0042591"}


id: PBO:0059135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 2","termid":"PBO:0059135"}


id: MONDO:0025512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of type II hypersensitivity.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type II hypersensitivity reaction disease","synonyms":[{"name":"disorder of type II hypersensitivity","type":"exact"},{"name":"type II hypersensitivity disease","type":"exact"}],"termid":"MONDO:0025512","xrefs":{"Monarch":{"xref_id":"0025512"}}}


id: PBO:0028995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proline_import","termid":"PBO:0028995"}


id: PBO:0039586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 4","termid":"PBO:0039586"}


id: PBO:0075826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 1 pseudogene 2","termid":"PBO:0075826"}


id: GO:0150200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transport across the blood-brain barrier.","definition_xrefs":["PMID:30280653","GOC:bc","GOC:aruk","PMID:29377008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"part_of","term_name":"regulation of vascular permeability","termid":"GO:0043114"},{"relation_name":"regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"}


id: PBO:0028764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_periphery_during_cellular_response_to_heat","termid":"PBO:0028764"}


id: GO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deoxynucleotide, a deoxyribonucleoside in ester linkage to phosphate, commonly at the 5' position of deoxyribose, into, out of or within a cell.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"deoxynucleotide transport","termid":"GO:0030302"}


id: MONDO:0015422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Orofaciodigital syndrome type 13 is a rare subtype of orofaciodigital syndrome, with sporadic occurrence, characterized by cardiac (mitral and tricuspid valve dysplasia) and neuropsychiatric manifestations (epilepsy, depression), in addition to oral, facial and digital malformations (lingual hamartomas, cleft lip, and brachydactyly, clinodactyly, syndactyly of hands and feet). Leukoaraiosis, on brain MRI examination, is also associated.","definition_xrefs":["Orphanet:141330"],"gene_count":0,"genotype_count":0,"name":"obsolete orofaciodigital syndrome type 13 (obsolete MONDO:0015422)","secondary_identifiers":["SCTID:763835004","UMLS:C2932680","MEDGEN:420203","MESH:C548035","GARD:10694"],"synonyms":[{"name":"Degner syndrome","type":"exact"},{"name":"OFD syndrome 13","type":"related"},{"name":"OFD13","type":"exact"},{"name":"OFDS 13","type":"related"},{"name":"oral facial digital syndrome 13","type":"related"},{"name":"oral facial digital syndrome type 13","type":"related"},{"name":"oral-facial-digital syndrome 13","type":"related"},{"name":"oral-facial-digital syndrome XIII","type":"related"},{"name":"oral-facial-digital syndrome type 13","type":"exact"},{"name":"orofaciodigital syndrome 13","type":"related"},{"name":"orofaciodigital syndrome XIII","type":"related"}],"termid":"MONDO:0015422","xrefs":{"Monarch":{"xref_id":"0015422"}}}


id: PBO:0089091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type zinc finger protein, human ZCCHC9 ortholog, implicated in mRNA splicing","termid":"PBO:0089091"}


id: PBO:0091248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase Otg1","termid":"PBO:0091248"}


id: FYPO:0002133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA does not occur. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0002131","FYPO:0000707"],"is_obsolete":false,"name":"abolished protein-RNA interaction","synonyms":[{"name":"RNA binding abolished","type":"exact"},{"name":"abolished RNA binding","type":"exact"},{"name":"abolished RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002133"}


id: GO:0016015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Acts as a trigger for a pattern specification process when present at a specific concentration within a gradient.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0098772","GO:0140677","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"morphogen activity","termid":"GO:0016015"}


id: MONDO:0024318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral infection of central nervous system","secondary_identifiers":["ICD10WHO:A80-A89","MESH:D020805","MEDGEN:91141","UMLS:C0348165","ICD10CM:A80-A89","SCTID:302810003"],"synonyms":[{"name":"central nervous system viral infection","type":"related"},{"name":"viral disease of central nervous system","type":"related"},{"name":"viral infection of central nervous system","type":"exact"}],"termid":"MONDO:0024318","xrefs":{"Monarch":{"xref_id":"0024318"}}}


id: PBO:0048776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine monophosphate reductase","termid":"PBO:0048776"}


id: PBO:0086733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene","termid":"PBO:0086733"}


id: PBO:0113172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; seven closely related but non-identical invertase genes have been described in yeast (SUC1-5, 7, 8) but only SUC2 is in the reference strain (S288C); mapped to 146.0 cM on chrII","termid":"PBO:0113172"}


id: MONDO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the hypoglossal nerve.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoglossal nerve disorder","secondary_identifiers":["MESH:D020437","DOID:13814","SCTID:24777009","UMLS:C0152181","NCIT:C26954","MEDGEN:57513","ICD9:352.5"],"synonyms":[{"name":"disease of hypoglossal nerve","type":"exact"},{"name":"disease or disorder of hypoglossal nerve","type":"exact"},{"name":"disorder of 12th nerve","type":"exact"},{"name":"disorder of XII nerve","type":"exact"},{"name":"disorder of hypoglossal [12th] nerve","type":"exact"},{"name":"disorder of hypoglossal nerve","type":"exact"},{"name":"disorder of the XII nerve","type":"exact"},{"name":"hypoglossal nerve disease","type":"exact"},{"name":"hypoglossal nerve disease or disorder","type":"exact"},{"name":"hypoglossal nerve disorder","type":"exact"},{"name":"twelfth nerve disorder","type":"exact"}],"termid":"MONDO:0001810","xrefs":{"Monarch":{"xref_id":"0001810"}}}


id: MONDO:0011402
data:
  {"annotated_genes":["SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86556],"is_not":false,"summary":null,"term":"MONDO:0011402"}]},"cv_name":"mondo","definition":"Congenital Cataracts Facial Dysmorphism Neuropathy (CCFDN) syndrome is a complex developmental disorder of autosomal recessive inheritance.","definition_xrefs":["Orphanet:48431"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic epicanthus (obsolete MONDO:0020165)","termid":"MONDO:0020165"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 16","termid":"MONDO:0016949"},{"relation_name":"is_a","term_name":"autosomal recessive degenerative and progressive cerebellar ataxia","termid":"MONDO:0020046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"congenital cataracts-facial dysmorphism-neuropathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:604168","SCTID:702433001","UMLS:C1858726","MESH:C565822","MEDGEN:346973","GARD:16645","ICD9:759.89"],"synonyms":[{"name":"CCFDN","type":"exact"},{"name":"cataract, congenital, with Facial Dysmorphism and neuropathy","type":"related"},{"name":"congenital cataracts, facial dysmorphism, and neuropathy","type":"related"},{"name":"congenital cataracts-facial dysmorphism-neuropathy syndrome","type":"exact"}],"termid":"MONDO:0011402","terms_by_termid":{"MONDO:0011402":null},"xrefs":{"Monarch":{"xref_id":"0011402"}}}


id: MONDO:0700021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 14 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 disorder","termid":"MONDO:0700021","xrefs":{"Monarch":{"xref_id":"0700021"}}}


id: GO:0051502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diterpene phytoalexins, terpenoids with 20 carbons produced by plants in response to environmental stresses.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"diterpene phytoalexin metabolic process","termid":"GO:0051501"},{"relation_name":"is_a","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"diterpene phytoalexin biosynthetic process","synonyms":[{"name":"diterpene phytoalexin anabolism","type":"exact"},{"name":"diterpene phytoalexin biosynthesis","type":"exact"},{"name":"diterpene phytoalexin formation","type":"exact"},{"name":"diterpene phytoalexin synthesis","type":"exact"}],"termid":"GO:0051502"}


id: PBO:0046683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1 pseudogene 1","termid":"PBO:0046683"}


id: PBO:0054024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1355","termid":"PBO:0054024"}


id: MONDO:0000644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the cervix. Representative examples include squamous papilloma, endocervical polyp, and rhabdomyoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine benign neoplasm","termid":"MONDO:0000632"},{"relation_name":"is_a","term_name":"uterine cervix neoplasm","termid":"MONDO:0021230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical benign neoplasm","secondary_identifiers":["MEDGEN:102300","SCTID:92056006","DOID:0060110","UMLS:C0153997","NCIT:C3607"],"synonyms":[{"name":"benign cervical neoplasm","type":"exact"},{"name":"benign cervix uteri neoplasm","type":"exact"},{"name":"benign cervix uteri tumor","type":"exact"},{"name":"benign cervix uteri tumour","type":"exact"},{"name":"benign neoplasm of cervix uteri","type":"exact"},{"name":"benign neoplasm of the cervix uteri","type":"exact"},{"name":"benign neoplasm of the uterine cervix","type":"exact"},{"name":"benign neoplasm of uterine cervix","type":"exact"},{"name":"benign tumor of cervix uteri","type":"exact"},{"name":"benign tumor of the cervix uteri","type":"exact"},{"name":"benign tumor of the uterine cervix","type":"exact"},{"name":"benign tumor of uterine cervix","type":"exact"},{"name":"benign tumour of cervix uteri","type":"exact"},{"name":"benign tumour of the cervix uteri","type":"exact"},{"name":"benign tumour of the uterine cervix","type":"exact"},{"name":"benign tumour of uterine cervix","type":"exact"},{"name":"benign uterine cervix neoplasm","type":"exact"},{"name":"benign uterine cervix tumor","type":"exact"},{"name":"benign uterine cervix tumour","type":"exact"},{"name":"uterine cervix benign neoplasm","type":"exact"}],"termid":"MONDO:0000644","xrefs":{"Monarch":{"xref_id":"0000644"}}}


id: PBO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.2","termid":"PBO:0000458"}


id: PR:O13816
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psc3 gene.","definition_xrefs":["UniProtKB:O13816","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin subunit psc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.20","synonyms":[{"name":"SCC3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-psc3","type":"exact"}],"termid":"PR:O13816"}


id: MONDO:1011053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, dog","secondary_identifiers":["OMIA:000807-9615"],"termid":"MONDO:1011053","xrefs":{"Monarch":{"xref_id":"1011053"}}}


id: PBO:0079673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 3","termid":"PBO:0079673"}


id: PBO:0114091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase membrane subunit, Atp6","termid":"PBO:0114091"}


id: FYPO:0007249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the level of X-shaped DNA replication intermediates is normal (i.e. indistinguishable from wild type). X-shaped intermediates may be formed by replication forks moving bidirectionally from outside the region, or by the increased formation or persistence of Holliday junctions or similar recombination intermediates.","definition_xrefs":["PMID:23071723","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal level of X-shaped replication intermediates","synonyms":[{"name":"normal level of X-shaped DNA replication intermediates","type":"exact"},{"name":"normal level of X-shaped replication intermediates during mitotic cell cycle","type":"related"},{"name":"normal level of X-shaped replication intermediates during vegetative growth","type":"exact"},{"name":"normal proportion of X-shaped replication intermediates","type":"related"}],"termid":"FYPO:0007249"}


id: MONDO:0023170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal or multifocal malformations in neuronal migration","termid":"MONDO:0023170","xrefs":{"Monarch":{"xref_id":"0023170"}}}


id: FYPO:0000448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MCM complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal MCM complex assembly","synonyms":[{"name":"abnormal MCM complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal MCM complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000448"}


id: MONDO:0007678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein, renal (obsolete MONDO:0007678)","secondary_identifiers":["OMIM:138710"],"synonyms":[{"name":"glycoprotein, renal","type":"exact"}],"termid":"MONDO:0007678","xrefs":{"Monarch":{"xref_id":"0007678"}}}


id: PBO:0042172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCN2 antisense RNA 1","termid":"PBO:0042172"}


id: PR:000027517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ase1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase spindle elongation protein 1","pombase_gene_id":"SPAPB1A10.09","synonyms":[{"name":"Ase1p","type":"exact"},{"name":"ase1","type":"exact"}],"termid":"PR:000027517"}


id: FYPO:0007207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize aspartate, and therefore requires aspartate in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for aspartate","synonyms":[{"name":"aspartate auxotrophy","type":"exact"},{"name":"growth auxotrophic for aspartate during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for aspartate during vegetative growth","type":"exact"},{"name":"growth auxotrophic for aspartatic acid","type":"exact"}],"termid":"FYPO:0007207"}


id: GO:0044095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of a host cell's nuclear content other than the chromosomes or the nucleolus. The host is the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nucleoplasm","termid":"GO:0044095"}


id: PBO:0085280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane E3 ubiquitin ligase; required for for Ubc4p-dependent Pex5p ubiquitination and peroxisomal matrix protein import; contains zinc-binding RING domain; mutations in human homolog cause various peroxisomal disorders","termid":"PBO:0085280"}


id: GO:0005300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the high-affinity transfer of L-tryptophan from one side of a membrane to the other. Tryptophan is 2-amino-3-(1H-indol-3-yl)propanoic acid. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan transmembrane transporter activity","termid":"GO:0015196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity tryptophan transmembrane transporter activity","synonyms":[{"name":"high-affinity tryptophan transporter activity","type":"broad"}],"termid":"GO:0005300"}


id: MONDO:0700147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects dogs, characterized by the presence of malignant cells with morphologic and immunophenotypic characteristics similar to those seen in mature histiocytes.","definition_xrefs":["NCIT:C128125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine histiocytic sarcoma","termid":"MONDO:0700147","xrefs":{"Monarch":{"xref_id":"0700147"}}}


id: MONDO:0019716
data:
  {"annotated_genes":["SJAG_04394","SJAG_04495","SJAG_02426","SJAG_04334","SJAG_03132","SJAG_03689","SJAG_03266","SJAG_03876","SJAG_04206","SJAG_01822"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018445"},{"annotations":[86264,86265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[86593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[84824,84822,84823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009416"},{"annotations":[84969,84967,84968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009965"},{"annotations":[86242,86240,86241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008318"}]},"cv_name":"mondo","definition":"A group of syndromes caused by genetic birth defects that may lead to the development of malignancies. It is characterized by a large body size or large body parts at birth, or excessive body growth early in childhood. Representative examples include neurofibromatosis, Beckwith-Wiedemann syndrome, and Sturge-Weber syndrome.","definition_xrefs":["NCIT:C94828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01822":null,"SJAG_02426":null,"SJAG_03132":null,"SJAG_03266":null,"SJAG_03689":null,"SJAG_03876":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"is_obsolete":false,"name":"overgrowth syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:2113355045","MEDGEN:458929","Orphanet:93460","GARD:19213","UMLS:C2986703"],"termid":"MONDO:0019716","terms_by_termid":{"MONDO:0008318":null,"MONDO:0009416":null,"MONDO:0009965":null,"MONDO:0011236":null,"MONDO:0011717":null,"MONDO:0018445":null},"xrefs":{"Monarch":{"xref_id":"0019716"}}}


id: PBO:0079945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USO1 vesicle transport factor","termid":"PBO:0079945"}


id: PBO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type (predicted)","termid":"PBO:0000728"}


id: MONDO:0010540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder characterized by formation of bullae without traumatic origin, alopecia, hyperpigmentation, acrocyanosis, short stature, microcephaly, intellectual deficit, tapering fingers and nail abnormalities. Two families (one of whom was Dutch and the other Italian) have been described up to now, in which only males were affected. Transmission is X-linked recessive. The bullous dystrophy locus has been mapped to Xq26.3 in the Italian family and to Xq27.3 in the Dutch family.","definition_xrefs":["Orphanet:1867"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullous dystrophy, macular type","secondary_identifiers":["MESH:C563065","MEDGEN:167089","OMIM:302000","UMLS:C0795974","GARD:1038"],"synonyms":[{"name":"EBM","type":"related"},{"name":"bullous dystrophy hereditary macular type","type":"related"},{"name":"bullous dystrophy, hereditary macular type","type":"related"},{"name":"epidermolysis bullosa macular type","type":"related"},{"name":"epidermolysis bullosa, macular type","type":"related"}],"termid":"MONDO:0010540","xrefs":{"Monarch":{"xref_id":"0010540"}}}


id: GO:0010238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a proline stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to proline","termid":"GO:0010238"}


id: GO:0072103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the glomerulus vasculature are generated and organized. The glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"is_a","term_name":"kidney vasculature morphogenesis","termid":"GO:0061439"},{"relation_name":"part_of","term_name":"glomerulus vasculature development","termid":"GO:0072012"},{"relation_name":"part_of","term_name":"glomerulus morphogenesis","termid":"GO:0072102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus vasculature morphogenesis","termid":"GO:0072103"}


id: PBO:0085248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-tRNA hydrolase that releases stalled peptides from ribosomes, component of a Cdc48p-complex; involved in protein quality control; exhibits cytosolic and ER-membrane localization; contributes to ER-associated degradation (ERAD) of specific substrates at a step after their ubiquitination; translocates to mitochondria under oxidative stress and forms a complex with Cdc48p and Npl4p that is required for ubiquitin-mediated mitochondria-associated protein degradation (MAD)","termid":"PBO:0085248"}


id: MONDO:0007680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multinodular goiter - cystic kidney - polydactyly syndrome is a very rare syndrome characterized by the association of multinodular goiter, cystic renal disease and digital anomalies.","definition_xrefs":["Orphanet:2091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multinodular goiter-cystic kidney-polydactyly syndrome","secondary_identifiers":["MEDGEN:333929","SCTID:723409007","UMLS:C1841853","GARD:1671","MESH:C535986","OMIM:138790"],"synonyms":[{"name":"Daneman Davy Mancer syndrome","type":"related"},{"name":"Daneman-Davy-Mancer syndrome","type":"exact"},{"name":"MNG/CRD/Da","type":"related"},{"name":"goiter, multinodular, cystic renal disease, and digital anomalies","type":"related"},{"name":"multinodular goiter - cystic kidney - polydactyly","type":"related"},{"name":"multinodular goiter, cystic renal disease, and digital anomalies","type":"related"},{"name":"multinodular goiter/cystic renal disease/digital anomalies","type":"related"},{"name":"multinodular goitre - cystic kidney - polydactyly","type":"related"},{"name":"thyroid-renal-digital anomalies","type":"exact"}],"termid":"MONDO:0007680","xrefs":{"Monarch":{"xref_id":"0007680"}}}


id: PBO:0082568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone with a role in facilitating mitochondrial protein import; ascomycete-specific member of the DnaJ-like family, closely related to Ydj1p; predicted to be C-terminally prenylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0082568"}


id: PBO:0076315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNM antisense RNA 1","termid":"PBO:0076315"}


id: PBO:0077608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 15","termid":"PBO:0077608"}


id: FYPO:0004088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the morphology of cytoplasmic microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"abnormal cytoplasmic microtubules","synonyms":[{"name":"abnormal cytoplasmic microtubule morphology","type":"exact"},{"name":"abnormal cytoplasmic microtubule structure","type":"narrow"},{"name":"abnormal cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"abnormal cytoplasmic microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004088"}


id: PBO:0059620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 1","termid":"PBO:0059620"}


id: MONDO:0014678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the MYT1L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 39","secondary_identifiers":["OMIM:616521","UMLS:C4225296","MEDGEN:909304","DOID:0070069"],"synonyms":[{"name":"MRD39","type":"exact"},{"name":"MYT1L autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"autosomal dominant intellectual disability 39","type":"exact"},{"name":"autosomal dominant mental retardation 39","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 39","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in MYT1L","type":"exact"},{"name":"chromosome 2P25.3 Duplication syndrome","type":"related"},{"name":"chromosome 2P25.3 deletion syndrome","type":"related"},{"name":"intellectual developmental disorder, autosomal dominant 39","type":"exact"},{"name":"intellectual disability, autosomal dominant 39","type":"exact"},{"name":"intellectual disability, autosomal dominant type 39","type":"exact"},{"name":"mental retardation, autosomal dominant 39","type":"related"},{"name":"mental retardation, autosomal dominant type 39","type":"exact"}],"termid":"MONDO:0014678","xrefs":{"Monarch":{"xref_id":"0014678"}}}


id: PBO:0004630
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.32","termid":"PBO:0004630"}


id: MONDO:0020479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The condition of accelerated and excessive growth in children or adolescents who are exposed to excess human growth hormone before the closure of epiphyses. It is usually caused by somatotroph hyperplasia or a growth hormone-secreting pituitary adenoma. These patients are of abnormally tall stature, more than 3 standard deviations above normal mean height for age.","definition_xrefs":["MESH:D005877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpituitarism","termid":"MONDO:0006793"},{"relation_name":"is_a","term_name":"growth hormone-producing pituitary gland neoplasm","termid":"MONDO:0019927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary gigantism","secondary_identifiers":["UMLS:C0017547","MedDRA:10018265","MEDGEN:6602","NANDO:2200314","GARD:6506","SCTID:86073008","Orphanet:99725","NANDO:2100111","NCIT:C93046"],"synonyms":[{"name":"gigantism","type":"related"},{"name":"hypophyseal gigantism","type":"exact"},{"name":"infantile and juvenile forms of acromegaly","type":"exact"}],"termid":"MONDO:0020479","xrefs":{"Monarch":{"xref_id":"0020479"}}}


id: PBO:0091854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk25","termid":"PBO:0091854"}


id: PBO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein Dni1","termid":"PBO:0001828"}


id: PBO:0034108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_subsequence","termid":"PBO:0034108"}


id: GO:0050993
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethylallyl diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"dimethylallyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"DPP metabolic process","type":"exact"},{"name":"DPP metabolism","type":"exact"},{"name":"dimethylallyl diphosphate metabolism","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolic process","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolism","type":"exact"}],"termid":"GO:0050993","terms_by_termid":{"GO:0050992":null}}


id: PBO:0075893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6","termid":"PBO:0075893"}


id: MOD:01008
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyl (phenylmethyl) group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}


id: PBO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease subunit","termid":"PBO:0001896"}


id: PBO:0117024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3146","termid":"PBO:0117024"}


id: GO:1903882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:20054338","GOC:krc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-17-mediated signaling pathway","termid":"GO:1903881"},{"relation_name":"negatively_regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of IL-17-mediated signalling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"negative regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"negative regulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903882"}


id: FYPO:0002040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of deadenylation-independent decapping of nuclear-transcribed mRNA is increased. All RNA decapping may be increased, or one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"FYPO:0002038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"increased deadenylation-independent decapping of nuclear-transcribed mRNA during mitotic cell cycle","type":"related"},{"name":"increased deadenylation-independent decapping of nuclear-transcribed mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0002040"}


id: MONDO:1040001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any developmental defect during embryogenesis in which the cause of the disease is a mutation in the TP63 gene. This disease is characterized by variable ectodermal dysplasia, limb defects, and orofacial clefting.","definition_xrefs":["PMID:11159940","PMID:22574117","PMID:10535733","PMID:11528512","PMID:16740912","PMID:21204238","PMID:12766194","PMID:10839977","PMID:11462173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP63-related ectodermal dysplasia spectrum with limb and orofacial malformations","termid":"MONDO:1040001","xrefs":{"Monarch":{"xref_id":"1040001"}}}


id: MONDO:0016248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of ovarian cancer that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited gynecological tumor (obsolete MONDO:0015981)","termid":"MONDO:0015981"},{"relation_name":"excluded_subClassOf","term_name":"malignant non-epithelial tumor of ovary","termid":"MONDO:0018365"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial ovarian cancer","secondary_identifiers":["icd11.foundation:1484739866","UMLS:C5679802","GARD:20467","Orphanet:213517","MEDGEN:1803368"],"synonyms":[{"name":"familial ovarian cancer","type":"exact"},{"name":"familial ovarian malignant tumor","type":"exact"},{"name":"familial ovarian malignant tumour","type":"exact"},{"name":"hereditary ovarian cancer","type":"exact"}],"termid":"MONDO:0016248","xrefs":{"Monarch":{"xref_id":"0016248"}}}


id: PATO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000739 absolute enzyme function value (obsolete PATO:0000739)","termid":"PATO:0000739"}


id: GO:0008199
data:
  {"annotated_genes":["SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71320],"is_not":false,"summary":null,"term":"GO:0008199"}]},"cv_name":"molecular_function","definition":"Binding to a ferric iron ion, Fe(III).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion binding","termid":"GO:0005506"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ferric iron binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008199","terms_by_termid":{"GO:0008199":null}}


id: PBO:0043480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNPY2 antisense RNA 1","termid":"PBO:0043480"}


id: PBO:0017609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transmembrane transporter Amt2","termid":"PBO:0017609"}


id: PBO:0028983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_acid_phosphatase_activity","termid":"PBO:0028983"}


id: PATO:0001285
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow","termid":"PATO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated yellow","synonyms":[{"name":"bright yellow","type":"related"}],"termid":"PATO:0001285"}


id: GO:0106356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + NADPH + O2 = 3,4-dihydroxybenzoate + H2O + NADP+.","definition_xrefs":["RHEA:19477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","termid":"GO:0018671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase (NADPH) activity","synonyms":[{"name":"4-hydroxybenzoate 3-monooxygenase [NADPH] activity","type":"exact"}],"termid":"GO:0106356"}


id: PBO:0084290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral subunit of SAGA histone acetyltransferase complex; regulates transcription of a subset of SAGA-regulated genes, required for the Ubp8p association with SAGA and for H2B deubiquitylation","termid":"PBO:0084290"}


id: MONDO:0014842
data:
  {"annotated_genes":["SJAG_01926"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85397],"is_not":false,"summary":null,"term":"MONDO:0014842"}]},"cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the TBL1XR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 41","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934751","OMIM:616944","DOID:0070071","UMLS:C4310784"],"synonyms":[{"name":"MRD41","type":"exact"},{"name":"TBL1XR1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"autosomal dominant intellectual disability 41","type":"exact"},{"name":"autosomal dominant mental retardation 41","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 41","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in TBL1XR1","type":"exact"},{"name":"intellectual disability, autosomal dominant 41","type":"exact"},{"name":"intellectual disability, autosomal dominant type 41","type":"exact"},{"name":"mental retardation, autosomal dominant 41","type":"exact"},{"name":"mental retardation, autosomal dominant type 41","type":"exact"}],"termid":"MONDO:0014842","terms_by_termid":{"MONDO:0014842":null},"xrefs":{"Monarch":{"xref_id":"0014842"}}}


id: MONDO:0012297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, complex type of hereditary spastic paraplegia characterized by early-onset progressive spastic paraplegia presenting in infancy, associated with optic atrophy, fixation nystagmus, polyneuropathy occurring in late childhood/early adolescence leading to severe motor disability and progressive joint contractures and scoliosis. SPOAN syndrome is caused by mutations in the KLC2 gene (11q13.1), encoding kinesin light chain 2.","definition_xrefs":["Orphanet:320406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia, optic atropy, and neuropathy","secondary_identifiers":["MESH:C563702","DOID:0060491","GARD:17479","MEDGEN:324411","OMIM:609541","UMLS:C1836010"],"synonyms":[{"name":"SPOAN","type":"exact"},{"name":"SPOAN syndrome","type":"exact"},{"name":"spastic paraplegia, optic atropy, and neuropathy syndrome","type":"exact"},{"name":"spastic paraplegia-optic atrophy-neuropathy syndrome","type":"exact"}],"termid":"MONDO:0012297","xrefs":{"Monarch":{"xref_id":"0012297"}}}


id: PBO:0034132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_modifier","termid":"PBO:0034132"}


id: PBO:0073171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase","termid":"PBO:0073171"}


id: PBO:0089931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex platform subcomplex scaffold subunit Apc15","termid":"PBO:0089931"}


id: PBO:0062567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AF member 1 pseudogene","termid":"PBO:0062567"}


id: GO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of T/G mismatches arising from deamination of 5-methylcytosine in DNA by nicking double-stranded DNA within the sequence CT(AT)GN or NT(AT)GG next to the mismatched thymidine residue. The incision is mismatch-dependent and strand-specific, in favor of the G-containing strand. The incision serves as a starting point for subsequent excision repair by DNA polymerase I, which excises thymidine and reinserts cytidine.","definition_xrefs":["PMID:17651368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"T/G mismatch-specific endonuclease activity","synonyms":[{"name":"DNA mismatch endonuclease","type":"broad"},{"name":"V.EcoKDcm","type":"related"},{"name":"Vsr mismatch endonuclease","type":"related"},{"name":"very short patch repair protein","type":"related"}],"termid":"GO:0043765"}


id: GO:0070276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any halogen, elements of Group VII; includes metabolism of halogen-containing compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"halogen metabolic process","synonyms":[{"name":"halogen metabolism","type":"exact"}],"termid":"GO:0070276"}


id: PBO:0057680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1269b","termid":"PBO:0057680"}


id: MONDO:0015367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charlie M syndrome is a rare bone developmental disorder which belongs to a group of oromandibular limb hypogenesis syndromes that includes hypoglossia-hypodactyly and glossopalatine ankylosis. The major anomalies which occur commonly in this group are hypoplasia of the mandible, syndactyly and ectrodactyly, small mouth, cleft palate, hypodontia, and facial paralysis. Patients with Charlie M syndrome also present with hypertelorism, absent or conically crowned incisors, and variable degrees of hypodactyly of the hands and feet. There have been no further descriptions in the literature since 1976.","definition_xrefs":["Orphanet:1406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"oromandibular-limb hypogenesis syndrome","termid":"MONDO:0017139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Charlie M syndrome","secondary_identifiers":["UMLS:C4518555","SCTID:733034007","MEDGEN:1379887","icd11.foundation:1284734481","GARD:1261"],"termid":"MONDO:0015367","xrefs":{"Monarch":{"xref_id":"0015367"}}}


id: FYPO:0003040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA splicing is decreased. All RNA splicing may be increased, or splicing of one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA splicing","synonyms":[{"name":"decreased RNA splicing during mitotic cell cycle","type":"related"},{"name":"decreased RNA splicing during vegetative growth","type":"exact"},{"name":"decreased RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"},{"name":"reduced RNA splicing","type":"exact"}],"termid":"FYPO:0003040"}


id: GO:0016763
data:
  {"annotated_genes":["SJAG_03775","SJAG_01661","SJAG_06634","SJAG_00694","SJAG_06284","SJAG_03708","SJAG_00827","SJAG_01859","SJAG_01359","SJAG_03881","SJAG_00683","SJAG_04709","SJAG_04747","SJAG_01974","SJAG_05228","SJAG_04354","SJAG_03167","SJAG_04713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003999"},{"annotations":[72191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004044"},{"annotations":[65678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004048"},{"annotations":[78221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003879"},{"annotations":[61511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160205"},{"annotations":[93522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052657"},{"annotations":[75237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004422"},{"annotations":[75678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000107"},{"annotations":[115846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050144"},{"annotations":[73171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004588"},{"annotations":[78868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004731"},{"annotations":[77607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017061"},{"annotations":[58699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043399"},{"annotations":[72447,95552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008479"},{"annotations":[87228,88212,91736,114663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004845"},{"annotations":[93525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000310"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00683":null,"SJAG_00694":null,"SJAG_00827":null,"SJAG_01359":null,"SJAG_01661":null,"SJAG_01859":null,"SJAG_01974":null,"SJAG_03167":null,"SJAG_03708":null,"SJAG_03775":null,"SJAG_03881":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04747":null,"SJAG_05228":null,"SJAG_06284":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"pentosyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-112265","Reactome:R-HSA-112266","EC:2.4.2.-"],"synonyms":[{"name":"transferase activity, transferring pentosyl groups","type":"exact"}],"termid":"GO:0016763","terms_by_termid":{"GO:0000107":null,"GO:0000310":null,"GO:0003879":null,"GO:0003999":null,"GO:0004044":null,"GO:0004048":null,"GO:0004422":null,"GO:0004588":null,"GO:0004731":null,"GO:0004845":null,"GO:0008479":null,"GO:0017061":null,"GO:0043399":null,"GO:0050144":null,"GO:0052657":null,"GO:0160205":null}}


id: PBO:0050795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 5A","termid":"PBO:0050795"}


id: GO:1990964
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex probably required for the internalization of endosomes during actin-coupled endocytosis. Links the site of endocytosis to the cell membrane-associated actin cytoskeleton, coordinating ARP2/3 stimulation at the later stages of endocytosis. Present in the late endocytic coat.","definition_xrefs":["GOC:bhm","PMID:10594004","PMID:11739778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex","termid":"GO:1990964"}


id: PBO:0076611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 29, pseudogene","termid":"PBO:0076611"}


id: PBO:0110262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage factor and polyadenylation specificity factor complex RNA-binding protein Rna15","termid":"PBO:0110262"}


id: GO:0052420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont xylan (obsolete GO:0052420)","termid":"GO:0052420"}


id: PBO:0083088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding protein that recognizes oligo(dA).oligo(dT) tracts; Arg side chain in its N-terminal pentad Gly-Arg-Lys-Pro-Gly repeat is required for DNA-binding; relocalizes to the cytosol in response to hypoxia; not essential for viability","termid":"PBO:0083088"}


id: MONDO:0004126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the thyroid gland. This category includes Hashimoto thyroiditis, Riedel thyroiditis, acute thyroiditis, subacute thyroiditis, and radiation-induced thyroiditis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroiditis","secondary_identifiers":["MESH:D013966","NCIT:C26894","UMLS:C0040147","icd11.foundation:587793334","ICD9:245.9","ICD9:245","HP:0100646","SCTID:82119001","DOID:7166","MEDGEN:21548"],"synonyms":[{"name":"inflammation of thyroid gland","type":"exact"},{"name":"thyroid gland inflammation","type":"exact"},{"name":"thyroiditis","type":"exact"},{"name":"thyroiditis (disease)","type":"exact"}],"termid":"MONDO:0004126","xrefs":{"Monarch":{"xref_id":"0004126"}}}


id: GO:0140535
data:
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id: GO:1901124
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id: MONDO:0012456
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id: GO:0003389
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id: PR:P0CT72
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id: GO:1901059
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id: PBO:0087077
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id: MONDO:0001241
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id: GO:0075193
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id: PBO:0080637
data:
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id: PBO:0116993
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id: PBO:0017044
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id: GO:1901942
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id: MONDO:0015251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete balantidiasis (obsolete MONDO:0015251)","termid":"MONDO:0015251","xrefs":{"Monarch":{"xref_id":"0015251"}}}


id: PBO:0078555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 43C, pseudogene","termid":"PBO:0078555"}


id: GO:0019575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose, catalyzed by the enzyme beta-fructofuranosidase (EC:3.2.1.26).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using beta-fructofuranosidase (obsolete GO:0019575)","synonyms":[{"name":"sucrose breakdown, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolic process, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolism, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose degradation, using beta-fructofuranosidase","type":"exact"}],"termid":"GO:0019575"}


id: FYPO:0003798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis","termid":"FYPO:0000478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiosis II","synonyms":[{"name":"normal second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003798"}


id: PBO:0044332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 14","termid":"PBO:0044332"}


id: MONDO:1011400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pituitary-dependent hyperadrenocorticism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma, non-human","termid":"MONDO:0700133"},{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"},{"relation_name":"is_a","term_name":"hyperadrenocorticism, non-human animal","termid":"MONDO:1011403"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary-dependent hyperadrenocorticism, non-human animal","secondary_identifiers":["OMIA:000247"],"termid":"MONDO:1011400","xrefs":{"Monarch":{"xref_id":"1011400"}}}


id: PBO:0051013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF2 antisense RNA","termid":"PBO:0051013"}


id: PBO:0116626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 3","termid":"PBO:0116626"}


id: PBO:0048128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUT8 antisense RNA 1","termid":"PBO:0048128"}


id: PBO:0003767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid-CoA ligase Lcf1","termid":"PBO:0003767"}


id: FYPO:0006236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of monomeric ribosomes (80S monosomes) in the cytosol.","definition_xrefs":["PMID:18065650","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at normal level","type":"exact"},{"name":"normal cytosolic 80S monosome level","type":"exact"},{"name":"normal cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"normal cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"normal cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"normal cytosolic ribosome level","type":"broad"},{"name":"normal level of cytosolic monomeric ribosomes","type":"exact"}],"termid":"FYPO:0006236"}


id: PATO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's loss of myelin sheath.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/demyelinated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"demyelinated","termid":"PATO:0002218"}


id: PBO:0054577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1979","termid":"PBO:0054577"}


id: PR:Q9Y7K1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase MsrB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C216.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.04c","secondary_identifiers":["UniProtKB:Q9Y7K1"],"synonyms":[{"name":"Spom972h-msrB","type":"exact"}],"termid":"PR:Q9Y7K1"}


id: PBO:0072882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding factor 1 pseudogene 1","termid":"PBO:0072882"}


id: PBO:0074512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A4","termid":"PBO:0074512"}


id: GO:0019116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxynicotine + H2O + O2 = 1-(6-hydroxypyrid-3-yl)-4-(methylamino)butan-1-one + hydrogen peroxide.","definition_xrefs":["GOC:jl","PMID:16095622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}


id: PBO:0064333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 3","termid":"PBO:0064333"}


id: MONDO:0014250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hyperprolactinemia is a rare, genetic endocrine disorder characterized by persistently high prolactin serum levels (not associated with gestation, puerperium, drug intake or pituitary tumor) in multiple affected family members. Clinically it manifests with signs usually observed in hyperprolactinemia, which are: secondary medroxyprogesterone acetate (MPA)-negative amenorrhea and galactorrhea in female patients, and hypogonadism and decreased testosterone level-driven sexual disfunction in male patients. Oligomenorrhea and primary infertility have also been reported in some female patients.","definition_xrefs":["Orphanet:397685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperprolactinemia","termid":"MONDO:0005804"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial hyperprolactinemia","secondary_identifiers":["OMIM:615555","ICD10CM:E22.1","SCTID:763715007","UMLS:C4706551","GARD:17634","MEDGEN:1645317"],"synonyms":[{"name":"HPRL","type":"related"},{"name":"familial hyperprolactinemia","type":"exact"},{"name":"familial isolated prolactin receptor deficiency","type":"exact"},{"name":"hereditary hyperprolactinemia (disease)","type":"exact"},{"name":"hyperprolactinemia","type":"related"}],"termid":"MONDO:0014250","xrefs":{"Monarch":{"xref_id":"0014250"}}}


id: MONDO:0018201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor arising in an anatomic site other than the testis or ovary (e.g., central nervous system, lung, mediastinum, and retroperitoneum).","definition_xrefs":["NCIT:C3918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extragonadal germ cell tumor","secondary_identifiers":["UMLS:C0262963","MEDGEN:75506","Orphanet:363579","GARD:9325"],"synonyms":[{"name":"extragonadal germ cell neoplasm","type":"exact"},{"name":"extragonadal germ cell neoplasms","type":"exact"},{"name":"extragonadal germ cell tumor","type":"exact"},{"name":"neoplasm of extragonadal germ cell","type":"exact"},{"name":"neoplasm of the extragonadal germ cell","type":"exact"},{"name":"primary extragonadal germ cell tumor","type":"exact"},{"name":"primary extragonadal germ cell tumour","type":"exact"},{"name":"tumor of extragonadal germ cell","type":"exact"},{"name":"tumor of the extragonadal germ cell","type":"exact"},{"name":"tumour of extragonadal germ cell","type":"exact"},{"name":"tumour of the extragonadal germ cell","type":"exact"}],"termid":"MONDO:0018201","xrefs":{"Monarch":{"xref_id":"0018201"}}}


id: PBO:0057210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 377","termid":"PBO:0057210"}


id: MONDO:0054771
data:
  {"annotated_genes":["SJAG_02509","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85765,85766],"is_not":false,"summary":null,"term":"MONDO:0054771"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617928","MEDGEN:1645093","UMLS:C4693660"],"synonyms":[{"name":"KTCN9","type":"related"},{"name":"keratoconus 9","type":"exact"}],"termid":"MONDO:0054771","terms_by_termid":{"MONDO:0054771":null},"xrefs":{"Monarch":{"xref_id":"0054771"}}}


id: PBO:0083626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 Ub-ligase (N-recognin); recognizes and ubiquitinates N-end rule pathway substrates in complex with Rad6p; Roq1p-bound form accelerates degradation of misfolded and native ER membrane and cytosolic proteins as part of the stress-induced homeostatically regulated protein degradation (SHRED) pathway; role in ER-associated protein degradation; modifies Cup9p to regulate peptide transport; mutation in human UBR1 causes Johansson-Blizzard Syndrome (JBS)","termid":"PBO:0083626"}


id: PATO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's being relocated around an axis.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rotated","synonyms":[{"name":"rotation","type":"exact"}],"termid":"PATO:0001599"}


id: GO:0032166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Arrays of septin filaments, or bars, found in a series of filamentous structures. Observed in the chlamydospore membrane during chlamydospore formation.","definition_xrefs":["PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin filament array","termid":"GO:0032160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"chlamydospore septin filament array","termid":"GO:0032166"}


id: GO:0036061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a muscle cell towards a tendon cell in response to an external stimulus. Tendon cells, for example, produce positive guidance cues that attract muscle cells.","definition_xrefs":["PMID:19793885","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell migration","termid":"GO:0014812"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell chemotaxis toward tendon cell","synonyms":[{"name":"muscle cell attraction","type":"related"},{"name":"muscle cell chemotaxis towards tendon cell","type":"exact"}],"termid":"GO:0036061"}


id: GO:0051619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of histamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of histamine uptake","termid":"GO:0051617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"inhibition of histamine uptake","synonyms":[{"name":"inhibition of histamine import","type":"exact"}],"termid":"GO:0051619"}


id: PBO:0061970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AI member 1 pseudogene","termid":"PBO:0061970"}


id: PR:O94238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11127:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.13","secondary_identifiers":["UniProtKB:O94238"],"synonyms":[{"name":"SPAC1805.13","type":"related"},{"name":"Spom972h-RPL14","type":"exact"}],"termid":"PR:O94238"}


id: MONDO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subclavian aneurysm is weakness or bulging in the wall of the subclavian artery, which is located below the collarbone. If the aneurysm ruptures, it can cause life-threatening, uncontrolled bleeding. Blood clots caused by the aneurysm can potentially lead to stroke or loss of fingers, the hand or, in rare cases, the entire arm.","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subclavian artery aneurysm","secondary_identifiers":["SCTID:40136003","DOID:342","MEDGEN:510068","ICD9:442.82","UMLS:C0155746"],"termid":"MONDO:0002641","xrefs":{"Monarch":{"xref_id":"0002641"}}}


id: PBO:0075141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide B2","termid":"PBO:0075141"}


id: PBO:0031155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transport","termid":"PBO:0031155"}


id: GO:0060352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a cell adhesion molecule due to biosynthesis or secretion.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell adhesion molecule production","termid":"GO:0060352"}


id: GO:0052791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2-keto-3-deoxynononic acid)n + H2O = (2-keto-3-deoxynononic acid)n-1 + 2-keto-3-deoxynononic acid. This reaction is the hydrolysis of a 2-keto-3-deoxynononic acid residue from a poly-2-keto-3-deoxynononic acid chain.","definition_xrefs":["GOC:mengo_curators","PMID:21247893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-sialidase activity","termid":"GO:0016997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"3-deoxy-D-glycero-D-galacto-2-nonulosonic acid hydrolase activity","synonyms":[{"name":"2-keto-3-deoxynononic acid sialidase activity","type":"exact"}],"termid":"GO:0052791"}


id: PBO:0051182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-73","termid":"PBO:0051182"}


id: MONDO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mandibuloacral dysplasia with lipodystrophy (obsolete MONDO:0000056)","termid":"MONDO:0000056","xrefs":{"Monarch":{"xref_id":"0000056"}}}


id: PBO:0060050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 38","termid":"PBO:0060050"}


id: PBO:0066279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member C, pseudogene","termid":"PBO:0066279"}


id: PBO:0073015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit delta","termid":"PBO:0073015"}


id: PBO:0031343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydrogen_peroxide","termid":"PBO:0031343"}


id: PBO:0064501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit D","termid":"PBO:0064501"}


id: GO:0003720
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70352],"is_not":false,"summary":null,"term":"GO:0003720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1) using an internal RNA template that encodes the telomeric repeat sequence.","definition_xrefs":["PMID:11812242","PMID:28732250","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed DNA polymerase activity","termid":"GO:0003964"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"telomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-163090","Reactome:R-HSA-164617"],"synonyms":[{"name":"telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"telomerase, catalyst","type":"exact"}],"termid":"GO:0003720","terms_by_termid":{"GO:0003720":null}}


id: PBO:0046366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 3","termid":"PBO:0046366"}


id: PBO:0069318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 576, pseudogene","termid":"PBO:0069318"}


id: GO:0030752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 5-hydroxyfuranocoumarin = S-adenosyl-L-homocysteine + 5-methoxyfuranocoumarin.","definition_xrefs":["EC:2.1.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"5-hydroxyfuranocoumarin 5-O-methyltransferase activity","secondary_identifiers":["GO:0030764","MetaCyc:2.1.1.69-RXN","RHEA:11808"],"synonyms":[{"name":"BMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:5-hydroxyfuranocoumarin 5-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:5-hydroxyfurocoumarin 5-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:bergaptol O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:bergaptolO-methyltransferase activity","type":"related"},{"name":"bergaptol 5-O-methyltransferase activity","type":"related"},{"name":"bergaptol O-methyltransferase activity","type":"related"},{"name":"bergaptol methyltransferase activity","type":"related"},{"name":"furanocoumarin 5-O-methyltransferase activity","type":"related"},{"name":"furanocoumarin 5-methyltransferase activity","type":"related"}],"termid":"GO:0030752"}


id: PBO:0090977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39","termid":"PBO:0090977"}


id: MONDO:0014120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A13","secondary_identifiers":["UMLS:C3809042","OMIM:615287","DOID:0111238","GARD:15938","MEDGEN:815372"],"synonyms":[{"name":"MDDGA13","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, B3Gnt1-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 13","type":"related"}],"termid":"MONDO:0014120","xrefs":{"Monarch":{"xref_id":"0014120"}}}


id: FYPO:0000129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is formed in the shape of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"spherical cell","termid":"FYPO:0001956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"spherical vegetative cell","synonyms":[{"name":"orb during vegetative growth","type":"exact"},{"name":"spherical cells during vegetative growth","type":"exact"},{"name":"spherical vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000129"}


id: GO:0061620
data:
  {"annotated_genes":["SJAG_00839","SJAG_01310","SJAG_03660","SJAG_03828","SJAG_02369","SJAG_02135","SJAG_00027","SJAG_00605","SJAG_03373","SJAG_06622","SJAG_03903","SJAG_00461","SJAG_02945","SJAG_02107","SJAG_06621","SJAG_04192","SJAG_02796","SJAG_04334","SJAG_04495","SJAG_02009"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105219,98022,105218,109144,109143,109146,109147,103136,97749,109142,77638,105587,94284,116092,94773,109141,109145,105588,105217,103393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, occurring through a glucose-6-phosphate intermediate, with the concomitant production of a small amount of ATP.","definition_xrefs":["GOC:dph","ISBN:0201090910","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006091","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glycolytic process through glucose-6-phosphate","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061620","terms_by_termid":{"GO:0061621":null}}


id: MONDO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete von willebrand disease (obsolete MONDO:0001545)","synonyms":[{"name":"obsolete von willebrand's disease","type":"exact"}],"termid":"MONDO:0001545","xrefs":{"Monarch":{"xref_id":"0001545"}}}


id: GO:1903260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mating projection tip.","definition_xrefs":["PMID:11952834","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to mating projection tip","synonyms":[{"name":"protein localisation in mating projection tip","type":"exact"},{"name":"protein localisation to mating projection tip","type":"exact"},{"name":"protein localization in mating projection tip","type":"exact"},{"name":"protein localization to conjugation tube tip","type":"narrow"},{"name":"protein localization to shmoo tip","type":"narrow"}],"termid":"GO:1903260"}


id: GO:2000467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycogen (starch) synthase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of glycogen (starch) synthase activity","termid":"GO:2000465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycogen (starch) synthase activity","synonyms":[{"name":"positive regulation of UDP-glucose-glycogen glucosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glycogen synthase activity","type":"exact"},{"name":"positive regulation of UDPG-glycogen synthetase activity","type":"exact"},{"name":"positive regulation of UDPG-glycogen transglucosylase activity","type":"exact"},{"name":"positive regulation of UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"positive regulation of glycogen (starch) synthetase activity","type":"exact"},{"name":"positive regulation of uridine diphosphoglucose-glycogen glucosyltransferase activity","type":"exact"}],"termid":"GO:2000467"}


id: MONDO:0012725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"lipoprotein glomerulopathy","secondary_identifiers":["NANDO:2200134","icd11.foundation:69778702","GARD:17504","OMIM:611771","Orphanet:329481","UMLS:C2673196","ICD9:272.8","MESH:C567089","SCTID:446923008","ICD9:593.89","MEDGEN:382034"],"synonyms":[{"name":"LPG","type":"exact"},{"name":"lipoprotein glomerulopathy","type":"exact"}],"termid":"MONDO:0012725","xrefs":{"Monarch":{"xref_id":"0012725"}}}


id: PBO:0080577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR4 pseudogene 1","termid":"PBO:0080577"}


id: MONDO:0044621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"16p12.1p12.3 triplication syndrome is a rare chromosomal anomaly syndrome resulting from the partial duplication of the short arm of chromosome 16 characterized by global developmental delay, pre- or post-natal growth delay and distinctive craniofacial features, including short palpebral fissures, epicanthal folds, bulbous nose, thin upper vermillion border, apparently low-set ears and large ear lobes. Variable clinical features that have been reported include congenital heart disease, genitourinary abnormalities, visual anomalies or, less commonly, infantile hepatic disease. Patients are also reported to have tapered fingers.","definition_xrefs":["Orphanet:485405"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 16","termid":"MONDO:0016949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16p12.1p12.3 triplication syndrome","secondary_identifiers":["UMLS:C5680097","GARD:21993","MEDGEN:1814451"],"synonyms":[{"name":"tetrasomy 16p12.1-p12.3","type":"exact"},{"name":"tetrasomy 16p12.1p12.3","type":"exact"},{"name":"trip(16)(p12.1p12.3)","type":"exact"}],"termid":"MONDO:0044621","xrefs":{"Monarch":{"xref_id":"0044621"}}}


id: GO:0047868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-2,3-dimethylmalate = dimethylmaleate + H2O.","definition_xrefs":["EC:4.2.1.85","RHEA:20253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"dimethylmaleate hydratase activity","secondary_identifiers":["KEGG_REACTION:R03069","MetaCyc:DIMETHYLMALEATE-HYDRATASE-RXN"],"synonyms":[{"name":"(2R,3S)-2,3-dimethylmalate hydro-lyase (dimethylmaleate-forming)","type":"related"},{"name":"(2R,3S)-2,3-dimethylmalate hydro-lyase activity","type":"related"}],"termid":"GO:0047868"}


id: PBO:0059064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3C","termid":"PBO:0059064"}


id: SO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence TGACTCA, bound by AP-1 and related transcription factors.","definition_xrefs":["PMID:3125983","PMID:1899230","PMID:3034432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP_1_binding_site","synonyms":[{"name":"AP-1 binding site","type":"exact"}],"termid":"SO:0001842"}


id: PBO:0073277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 11","termid":"PBO:0073277"}


id: PBO:0076711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF12 divergent transcript","termid":"PBO:0076711"}


id: PBO:0061565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, mitochondrial","termid":"PBO:0061565"}


id: PBO:0082571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin deacetylase; together with Cda1p involved in the biosynthesis ascospore wall component, chitosan; required for proper rigidity of the ascospore wall","termid":"PBO:0082571"}


id: PBO:0071947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4 Y-linked 1","termid":"PBO:0071947"}


id: MONDO:0018092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bilateral, chronic, diffuse granulomatous panuveitis typically characterized by serous retinal detachment and frequently associated with neurological (meningitis), auditory, and dermatological alterations.","definition_xrefs":["Orphanet:3437"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune disorder of the nervous system","termid":"MONDO:0002977"},{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes pigmentation anomaly (obsolete MONDO:0020191)","termid":"MONDO:0020191"},{"relation_name":"is_a","term_name":"panuveitis","termid":"MONDO:0017255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Vogt-Koyanagi-Harada disease","secondary_identifiers":["MEDGEN:22599","NCIT:C85218","UMLS:C0042170","ICD9:364.24","MESH:D014607","ICD9:363.22","DOID:12297","SCTID:193497004","GARD:7862","NORD:1829"],"synonyms":[{"name":"Harada's disease","type":"exact"},{"name":"Uveomenigitic syndrome","type":"exact"},{"name":"VKH disease","type":"related"},{"name":"VKH syndrome","type":"related"},{"name":"Vogt-Koyanagi syndrome","type":"exact"},{"name":"Vogt-Koyanagi-Harada syndrome","type":"related"},{"name":"uveomeningoencephalitic syndrome","type":"exact"}],"termid":"MONDO:0018092","xrefs":{"Monarch":{"xref_id":"0018092"}}}


id: PBO:0091940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, expressed in stationary phase and quiescence","termid":"PBO:0091940"}


id: MONDO:0957309
data:
  {"annotated_genes":["SJAG_01857"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86108],"is_not":false,"summary":null,"term":"MONDO:0957309"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01857":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 90B, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620417","MEDGEN:1841214","UMLS:C5830578","DOID:0070460"],"termid":"MONDO:0957309","terms_by_termid":{"MONDO:0957309":null},"xrefs":{"Monarch":{"xref_id":"0957309"}}}


id: GO:0019098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that is associated with reproduction.","definition_xrefs":["GOC:pr","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive behavior","secondary_identifiers":["GO:0044704","GO:0044705","GO:0033057"],"synonyms":[{"name":"multi-organism reproductive behavior","type":"narrow"},{"name":"multicellular organism reproductive behavior","type":"narrow"},{"name":"reproductive behavior in a multicellular organism","type":"exact"},{"name":"reproductive behaviour","type":"exact"},{"name":"single-organism reproductive behavior","type":"related"}],"termid":"GO:0019098"}


id: MONDO:0100097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital alveolar dysplasia in which the cause of the disease is a mutation in the TBX4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital alveolar dysplasia","termid":"MONDO:0100077"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital alveolar dysplasia due to TBX4","synonyms":[{"name":"CAD due to TBX4","type":"exact"}],"termid":"MONDO:0100097","xrefs":{"Monarch":{"xref_id":"0100097"}}}


