# terms

id: GO:0061331
data:
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id: GO:0051603
data:
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id: GO:0015840
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id: MONDO:0700088
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id: MONDO:0027667
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id: PBO:0048497
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id: SO:0000184
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id: GO:0031682
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id: MONDO:1012277
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id: MONDO:0100047
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id: PBO:0017449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-parasite_of","termid":"PBO:0017449"}


id: PBO:0091004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 beta subunit","termid":"PBO:0091004"}


id: PBO:0071258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 3","termid":"PBO:0071258"}


id: PBO:0058800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7706","termid":"PBO:0058800"}


id: MONDO:0018508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of small intestine carcinoma that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare carcinoma of small intestine (obsolete MONDO:0018508)","secondary_identifiers":["Orphanet:423957"],"synonyms":[{"name":"rare carcinoma of small bowel","type":"exact"},{"name":"rare small intestine carcinoma","type":"exact"}],"termid":"MONDO:0018508","xrefs":{"Monarch":{"xref_id":"0018508"}}}


id: PBO:0116473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tdk family toxin-antidote meiotic driver","termid":"PBO:0116473"}


id: MONDO:0002498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glioblastoma multiforme (obsolete MONDO:0002498)","synonyms":[{"name":"obsolete glioblastoma multiforme (disease)","type":"exact"}],"termid":"MONDO:0002498","xrefs":{"Monarch":{"xref_id":"0002498"}}}


id: PBO:0017756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic phenylalanine-tRNA ligase beta subunit Frs1 (predicted)","termid":"PBO:0017756"}


id: MONDO:0017714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"acyl-CoA dehydrogenase deficiency","secondary_identifiers":["GARD:21318","MEDGEN:541378","SCTID:82319005","UMLS:C0268635","Orphanet:309120"],"termid":"MONDO:0017714","xrefs":{"Monarch":{"xref_id":"0017714"}}}


id: PBO:0074791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 11B","termid":"PBO:0074791"}


id: MONDO:1010425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phelan-McDermid syndrome that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phelan-McDermid syndrome, non-human animal","termid":"MONDO:1010006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phelan-McDermid syndrome, crab-eating macaque","secondary_identifiers":["OMIA:002402-9541"],"termid":"MONDO:1010425","xrefs":{"Monarch":{"xref_id":"1010425"}}}


id: GO:1990419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an elemental metal stimulus.","definition_xrefs":["PMID:22688007"],"gene_count":0,"genotype_count":0,"name":"obsolete response to elemental metal (obsolete GO:1990419)","synonyms":[{"name":"response to elemental metal","type":"exact"}],"termid":"GO:1990419"}


id: GO:0090534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that carries out the reaction: ATP + H2O + Ca2+(out) = ADP + phosphate + Ca2+(in).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation-transporting ATPase complex","termid":"GO:0090533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calcium ion-transporting ATPase complex","termid":"GO:0090534"}


id: PBO:0061957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 13 pseudogene","termid":"PBO:0061957"}


id: PBO:0084167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of the mitochondrial pyruvate carrier (MPC); expressed during growth on fermentable carbon sources, and heterodimerizes with Mpc1p to form the fermentative isoform of MPC; MPC localizes to the mitochondrial inner membrane and mediates pyruvate uptake; MPC2 paralog, MPC3, heterodimerizes with Mpc1p to form the respiratory MPC isoform","termid":"PBO:0084167"}


id: PBO:0079360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 3f pseudogene","termid":"PBO:0079360"}


id: MONDO:0859321
data:
  {"annotated_genes":["SJAG_01490"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85488],"is_not":false,"summary":null,"term":"MONDO:0859321"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01490":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 3 deficiency, nuclear type 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620137","UMLS:C5774259","MEDGEN:1824032"],"termid":"MONDO:0859321","terms_by_termid":{"MONDO:0859321":null},"xrefs":{"Monarch":{"xref_id":"0859321"}}}


id: PATO:0000731
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000731 body position value (obsolete PATO:0000731)","termid":"PATO:0000731"}


id: PBO:0031795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_cell_cycle_progression","termid":"PBO:0031795"}


id: GO:0042218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-aminocyclopropane-1-carboxylate, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate biosynthetic process","synonyms":[{"name":"1-aminocyclopropane-1-carboxylate anabolism","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate biosynthesis","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate formation","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate synthesis","type":"exact"}],"termid":"GO:0042218"}


id: GO:0090153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of membrane lipid metabolic process","termid":"GO:1905038"},{"relation_name":"regulates","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044085","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of sphingolipid biosynthetic process","termid":"GO:0090153"}


id: MONDO:0049223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta, type 19","secondary_identifiers":["DOID:0111847","MEDGEN:1648353","OMIM:301014","UMLS:C4746956"],"synonyms":[{"name":"OI19","type":"related"},{"name":"osteogenesis imperfecta, type XIX","type":"related"},{"name":"osteogenesis imperfecta, type XIX, X-linked recessive","type":"exact"}],"termid":"MONDO:0049223","xrefs":{"Monarch":{"xref_id":"0049223"}}}


id: MONDO:0018239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aggrecan-related bone disorder (obsolete MONDO:0018239)","secondary_identifiers":["Orphanet:364817"],"termid":"MONDO:0018239","xrefs":{"Monarch":{"xref_id":"0018239"}}}


id: FYPO:0001256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hypoxia is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during cellular response to oxygen","termid":"FYPO:0001255"},{"relation_name":"is_a","term_name":"altered protein level during cellular response to hypoxia","termid":"FYPO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during cellular response to hypoxia","synonyms":[{"name":"increased protein accumulation during cellular response to hypoxia","type":"related"},{"name":"increased protein level during cellular response to hyperoxic stress","type":"exact"},{"name":"increased protein level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"increased protein level during cellular response to increased oxygen tension","type":"exact"}],"termid":"FYPO:0001256"}


id: GO:1902159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["GOC:TermGenie","PMID:11420311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide-activated ion channel activity","type":"exact"}],"termid":"GO:1902159"}


id: PBO:0062238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BB member 1 pseudogene","termid":"PBO:0062238"}


id: GO:0045293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that posttranscriptionally catalyzes insertion, deletion or substitution of nucleotides at multiple sites within nascent mRNA transcripts to produce mature mRNAs in eukaryotes.","definition_xrefs":["PMID:11564867","PMID:24316715","PMID:12139607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mRNA editing complex","synonyms":[{"name":"editosome","type":"exact"}],"termid":"GO:0045293"}


id: GO:0032747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-23 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-23 production","termid":"GO:0032667"},{"relation_name":"positively_regulates","term_name":"interleukin-23 production","termid":"GO:0032627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-23 production","secondary_identifiers":["GO:0045398"],"synonyms":[{"name":"activation of interleukin-23 production","type":"narrow"},{"name":"positive regulation of IL-23 production","type":"exact"},{"name":"positive regulation of interleukin-23 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-23 production","type":"narrow"},{"name":"up regulation of interleukin-23 production","type":"exact"},{"name":"up-regulation of interleukin-23 production","type":"exact"},{"name":"upregulation of interleukin-23 production","type":"exact"}],"termid":"GO:0032747"}


id: PBO:0092014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b, Cob1","termid":"PBO:0092014"}


id: GO:0102154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4',6-tetrahydroxydibenzoylmethane + UDP-alpha-D-glucose = 8C-glucosyl-2-hydroxynaringenin + UDP + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 8C-naringenin dibenzoylmethane tautomer glucosyltransferase activity (obsolete GO:0102154)","termid":"GO:0102154"}


id: FYPO:0002338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is abnormal. The nuclear periphery is the portion of the nuclear lumen proximal to the inner nuclear membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to nuclear periphery","synonyms":[{"name":"abnormal protein localisation to nuclear periphery","type":"exact"},{"name":"abnormal protein localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0002338"}


id: PBO:0059188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member D","termid":"PBO:0059188"}


id: PBO:0056802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 1","termid":"PBO:0056802"}


id: SO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for cytosolic SSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_rRNA_gene","termid":"SO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_SSU_rRNA_gene","synonyms":[{"name":"cytosolic small subunit rRNA gene","type":"exact"}],"termid":"SO:0002362"}


id: MONDO:0024296
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm arising from vascular tissue including arteries, veins, venous sinuses, lymphatic vessels, arterioles and capillaries. It may occur in essentially any body location and is characterized by the presence of vascular channel formation and endothelial cells.","definition_xrefs":["NCIT:C7388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"vascular neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:129202","UMLS:C0282607"],"synonyms":[{"name":"neoplasm of vascular system","type":"exact"},{"name":"neoplasm of vascular tissue","type":"exact"},{"name":"neoplasms, vascular","type":"exact"},{"name":"tumor of vascular system","type":"exact"},{"name":"tumor of vascular tissue","type":"exact"},{"name":"tumors, vascular","type":"exact"},{"name":"tumour of vascular system","type":"exact"},{"name":"tumour of vascular tissue","type":"exact"},{"name":"vascular neoplasm","type":"exact"},{"name":"vascular neoplasms","type":"exact"},{"name":"vascular system neoplasm","type":"exact"},{"name":"vascular system neoplasm (disease)","type":"exact"},{"name":"vascular system tumor","type":"exact"},{"name":"vascular system tumour","type":"exact"},{"name":"vascular tissue neoplasm","type":"exact"},{"name":"vascular tissue tumor","type":"exact"},{"name":"vascular tissue tumour","type":"exact"},{"name":"vascular tumor","type":"exact"},{"name":"vascular tumors","type":"exact"},{"name":"vascular tumour","type":"exact"},{"name":"vascular tumours","type":"exact"}],"termid":"MONDO:0024296","terms_by_termid":{"MONDO:0007154":null},"xrefs":{"Monarch":{"xref_id":"0024296"}}}


id: FYPO:0001436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing trichodermin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on trichodermin","synonyms":[{"name":"normal cell population growth in presence of trichodermin","type":"exact"},{"name":"normal cell population growth on trichodermin","type":"exact"},{"name":"normal cellular response to trichodermin","type":"related"},{"name":"normal vegetative cell population growth on trichodermin","type":"exact"}],"termid":"FYPO:0001436"}


id: GO:0050904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The passage of a leukocyte between the tight junctions of endothelial cells lining blood vessels, typically the fourth and final step of cellular extravasation.","definition_xrefs":["PMID:14680625","PMID:14708592","PMID:7507411","PMID:8600538","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diapedesis","termid":"GO:0050904"}


id: PBO:0050231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 9","termid":"PBO:0050231"}


id: FYPO:0008131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the selection of the new growth site is at the old cell end .","definition_xrefs":["PMID:14663827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal growth site selection after cell division","termid":"FYPO:0008131"}


id: PBO:0069016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 260, pseudogene","termid":"PBO:0069016"}


id: PBO:0036356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex NOT box subunit Not3/5","termid":"PBO:0036356"}


id: PBO:0042119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 191","termid":"PBO:0042119"}


id: PBO:0075220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPN upstream open reading frame like (pseudogene)","termid":"PBO:0075220"}


id: PBO:0088120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Fe2+/Mn2+ transporter; suppresses respiratory deficit of yfh1 mutants, which lack the ortholog of mammalian frataxin, by preventing mitochondrial iron accumulation; relative distribution to the vacuole decreases upon DNA replication stress","termid":"PBO:0088120"}


id: PBO:0086449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosyltransferase involved in protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family; KTR7 has a paralog, KTR5, that arose from the whole genome duplication","termid":"PBO:0086449"}


id: PBO:0076560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3","termid":"PBO:0076560"}


id: GO:0008641
data:
  {"annotated_genes":["SJAG_00878","SJAG_03896","SJAG_03950","SJAG_02082","SJAG_00853","SJAG_02084","SJAG_05032","SJAG_00604","SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69375],"is_not":false,"summary":null,"term":"GO:0008641"},{"annotations":[73046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019778"},{"annotations":[73047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019779"},{"annotations":[79420,71047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019781"},{"annotations":[97515,75244,95966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019948"},{"annotations":[73675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004839"},{"annotations":[73937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042292"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-sulfur bonds","termid":"GO:0016877"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00645":null,"SJAG_00853":null,"SJAG_00878":null,"SJAG_02082":null,"SJAG_02084":null,"SJAG_03896":null,"SJAG_03950":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"ubiquitin-like modifier activating enzyme activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008642"],"synonyms":[{"name":"small protein activating enzyme activity","type":"narrow"}],"termid":"GO:0008641","terms_by_termid":{"GO:0004839":null,"GO:0008641":null,"GO:0019778":null,"GO:0019779":null,"GO:0019781":null,"GO:0019948":null,"GO:0042292":null}}


id: GO:0160070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of tetrahydroxoborate within a cell.","definition_xrefs":["PMID:15525507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular borate homeostasis","synonyms":[{"name":"intracellular boron homeostasis","type":"exact"},{"name":"intracellular tetrahydroxoborate homeostasis","type":"exact"}],"termid":"GO:0160070"}


id: PBO:0065657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRG antisense RNA 1","termid":"PBO:0065657"}


id: PATO:0000768
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A consumption which is relatively low.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000768 decreased consumption (obsolete PATO:0000768)","synonyms":[{"name":"decreased propensity to consume","type":"related"},{"name":"low consumption","type":"exact"}],"termid":"PATO:0000768"}


id: MONDO:0850292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cognitive disorder that is characterized by the presence of significant and persistent cognitive complaints.","definition_xrefs":["DOID:0080831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cognitive disorder","termid":"MONDO:0002039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"subjective cognitive decline","termid":"MONDO:0850292","xrefs":{"Monarch":{"xref_id":"0850292"}}}


id: MONDO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the rete testis","direct_ancestors":[{"relation_name":"is_a","term_name":"rete testis neoplasm","termid":"MONDO:0003562"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rete testis adenocarcinoma","secondary_identifiers":["UMLS:C0863024","DOID:14544","MEDGEN:209023","NCIT:C8955"],"synonyms":[{"name":"adenocarcinoma of rete testis","type":"exact"},{"name":"adenocarcinoma of the rete testis","type":"exact"},{"name":"carcinoma, rete testis, malignant","type":"exact"},{"name":"rete testis adenocarcinoma","type":"exact"}],"termid":"MONDO:0001992","xrefs":{"Monarch":{"xref_id":"0001992"}}}


id: FYPO:0005698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from the equatorial microtubule organizing center does not occur.","definition_xrefs":["PomBase:mah","PMID:19001497"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cytoplasmic microtubules nucleated from eMTOC absent from cell","termid":"FYPO:0004619"},{"relation_name":"is_a","term_name":"abolished cytoplasmic microtubule nucleation","termid":"FYPO:0005693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished microtubule nucleation from eMTOC","synonyms":[{"name":"abolished cytoplasmic microtubule nucleation from eMTOC","type":"exact"},{"name":"abolished microtubule nucleation from eMTOC during mitotic cell cycle","type":"exact"},{"name":"abolished microtubule nucleation from eMTOC during vegetative growth","type":"exact"},{"name":"abolished microtubule nucleation from equatorial microtubule organizing center","type":"exact"},{"name":"abolished microtubule nucleation from equatorial microtubule organizing centre","type":"exact"},{"name":"microtubule nucleation from eMTOC abolished","type":"exact"}],"termid":"FYPO:0005698"}


id: GO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a chemoattractant and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled chemoattractant receptor activity","synonyms":[{"name":"G protein chemoattractant receptor activity","type":"exact"},{"name":"G-protein chemoattractant receptor activity","type":"exact"},{"name":"G-protein coupled chemoattractant receptor activity","type":"exact"}],"termid":"GO:0001637"}


id: PBO:0068810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 47, pseudogene","termid":"PBO:0068810"}


id: FYPO:0001360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import","termid":"FYPO:0001058"},{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased amino acid import during vegetative growth","synonyms":[{"name":"decreased amino acid import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased amino acid import during mitotic cell cycle","type":"related"},{"name":"decreased amino acid import into cell during vegetative growth","type":"exact"},{"name":"decreased amino acid uptake during vegetative growth","type":"exact"},{"name":"reduced amino acid import during vegetative growth","type":"exact"}],"termid":"FYPO:0001360"}


id: PBO:0067415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 526, pseudogene","termid":"PBO:0067415"}


id: GO:0043409
data:
  {"annotated_genes":["SJAG_00975","SJAG_05000","SJAG_04825","SJAG_02000","SJAG_03893","SJAG_02392","SJAG_02013","SJAG_02233","SJAG_01114","SJAG_03185","SJAG_04522","SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87967],"is_not":false,"summary":null,"term":"GO:0043409"},{"annotations":[103555,99201,106804,95608,107364,118057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[91426,95728,94793,116820,99203,118058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[106893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00975":null,"SJAG_01114":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03893":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of MAPK cascade","type":"exact"},{"name":"down regulation of MAPKKK cascade","type":"exact"},{"name":"down-regulation of MAPK cascade","type":"exact"},{"name":"down-regulation of MAPKKK cascade","type":"exact"},{"name":"downregulation of MAPK cascade","type":"exact"},{"name":"downregulation of MAPKKK cascade","type":"exact"},{"name":"inhibition of MAPK cascade","type":"narrow"},{"name":"inhibition of MAPKKK cascade","type":"narrow"},{"name":"negative regulation of MAP kinase cascade","type":"exact"},{"name":"negative regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of MAPKKK cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"}],"termid":"GO:0043409","terms_by_termid":{"GO:0043409":null,"GO:0180040":null,"GO:1903138":null,"GO:1903753":null}}


id: PBO:0054145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1512","termid":"PBO:0054145"}


id: PBO:0049956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 2","termid":"PBO:0049956"}


id: PBO:0030683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pear-shaped_vegetative_cell","termid":"PBO:0030683"}


id: GO:1903007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Lys63-specific deubiquitinase activity.","definition_xrefs":["GO_REF:0000059","GOC:PARL","GOC:bf","PMID:22970133","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"positive regulation of protein K63-linked deubiquitination","termid":"GO:1903006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Lys63-specific deubiquitinase activity","synonyms":[{"name":"activation of Lys63-specific deubiquitinase activity","type":"narrow"},{"name":"up regulation of Lys63-specific deubiquitinase activity","type":"exact"},{"name":"up-regulation of Lys63-specific deubiquitinase activity","type":"exact"},{"name":"upregulation of Lys63-specific deubiquitinase activity","type":"exact"}],"termid":"GO:1903007"}


id: MONDO:0009629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Desbuquois dysplasia in which the cause of the disease is a mutation in the CANT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Desbuquois dysplasia","termid":"MONDO:0015426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Desbuquois dysplasia 1","secondary_identifiers":["UMLS:C4012146","OMIM:251450","MEDGEN:860583","GARD:16451"],"synonyms":[{"name":"CANT1 Desbuquois dysplasia","type":"exact"},{"name":"DBQD1","type":"related"},{"name":"Desbuquois dysplasia 1","type":"exact"},{"name":"Desbuquois dysplasia caused by mutation in CANT1","type":"exact"},{"name":"Desbuquois dysplasia type 1","type":"exact"},{"name":"Desbuquois dysplasia, Kim variant","type":"related"},{"name":"desbuquois syndrome","type":"related"},{"name":"micromelic dwarfism with vertebral and metaphyseal abnormalities and advanced carpotarsal ossification","type":"related"}],"termid":"MONDO:0009629","xrefs":{"Monarch":{"xref_id":"0009629"}}}


id: GO:0046710
data:
  {"annotated_genes":["SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64166],"is_not":false,"summary":null,"term":"GO:0046710"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP metabolic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"GDP metabolism","type":"exact"}],"termid":"GO:0046710","terms_by_termid":{"GO:0046710":null}}


id: PBO:0046576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 18","termid":"PBO:0046576"}


id: MONDO:0035784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with rectovesical fistula (obsolete MONDO:0035784)","secondary_identifiers":["Orphanet:600984"],"termid":"MONDO:0035784","xrefs":{"Monarch":{"xref_id":"0035784"}}}


id: PBO:0047139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 174 member B","termid":"PBO:0047139"}


id: MONDO:0042956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Saal-Bulas syndrome","secondary_identifiers":["MESH:C537193","MEDGEN:419079","UMLS:C2931439"],"synonyms":[{"name":"Saal Bulas syndrome","type":"related"},{"name":"ectrodactyly, diaphragmatic hernia, congenital heart defect, and agenesis of the corpus callosum","type":"related"}],"termid":"MONDO:0042956","xrefs":{"Monarch":{"xref_id":"0042956"}}}


id: FYECO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethylenediaminetetraacetic acid (EDTA) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ EDTA","synonyms":[{"name":"EDTA added","type":"exact"},{"name":"ethylenediaminetetraacetic acid added","type":"exact"}],"termid":"FYECO:0000176"}


id: PBO:0055528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2963","termid":"PBO:0055528"}


id: PBO:0089951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA ligase Mse1","termid":"PBO:0089951"}


id: PBO:0031724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiotic_recombination","termid":"PBO:0031724"}


id: PBO:0085071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonhistone component of centromeric chromatin; binds to histone H3 variant, Cse4p, and recruits it to centromeres; involved in the assembly and maintenance of Cse4-H4 at centromeres; required for kinetochore assembly and G2/M progression; may protect Cse4p from ubiquitination; homolog of mammalian HJURP","termid":"PBO:0085071"}


id: MONDO:0008925
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85762],"is_not":false,"summary":null,"term":"MONDO:0008925"}]},"cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the LEMD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 46 juvenile-onset","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:113102","MESH:C538286","OMIM:212500","Orphanet:98987","UMLS:C0220721","DOID:0110243","GARD:1150"],"synonyms":[{"name":"CTRCT46","type":"exact"},{"name":"LEMD2 early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 46, juvenile-onset","type":"related"},{"name":"cataract Hutterite type","type":"related"},{"name":"cataract, congenital or juvenile","type":"related"},{"name":"cataract, juvenile, Hutterite type","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in LEMD2","type":"exact"},{"name":"juvenilae cataract Hutterite type","type":"exact"}],"termid":"MONDO:0008925","terms_by_termid":{"MONDO:0008925":null},"xrefs":{"Monarch":{"xref_id":"0008925"}}}


id: MONDO:1011000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syringomyelia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syringomyelia, non-human animal","termid":"MONDO:1010236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia, horse","secondary_identifiers":["OMIA:000965-9796"],"termid":"MONDO:1011000","xrefs":{"Monarch":{"xref_id":"1011000"}}}


id: PBO:0081938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 1 pseudogene 1","termid":"PBO:0081938"}


id: PBO:0016911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug94","termid":"PBO:0016911"}


id: PR:O13924
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase haspin homolog hrk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.03","synonyms":[{"name":"Spom972h-hrk1","type":"exact"}],"termid":"PR:O13924"}


id: GO:0042548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the light-dependent reaction of photosynthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"},{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}


id: PBO:0000794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein","termid":"PBO:0000794"}


id: PBO:0046897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM20C golgi associated secretory pathway kinase","termid":"PBO:0046897"}


id: GO:0032460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"negatively_regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of protein oligomerization","synonyms":[{"name":"down regulation of protein oligomerization","type":"exact"},{"name":"down-regulation of protein oligomerization","type":"exact"},{"name":"downregulation of protein oligomerization","type":"exact"},{"name":"inhibition of protein oligomerization","type":"narrow"}],"termid":"GO:0032460"}


id: PBO:0003500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamidoimidazolesuccinocarboxamide synthase, SAICAR synthetase, Ade7","termid":"PBO:0003500"}


id: PBO:0091973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gut2","termid":"PBO:0091973"}


id: PATO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's all-encompassing, grotesque morphological defects.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monstrous","termid":"PATO:0001465"}


id: PBO:0058120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4422 host gene","termid":"PBO:0058120"}


id: GO:0018042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-histidine amide by hydrolysis and oxidation of an interior His-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0089"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-histidine amidation (obsolete GO:0018042)","termid":"GO:0018042"}


id: PBO:0062905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress responsive kinase 1","termid":"PBO:0062905"}


id: PBO:0085313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylethanolamine methyltransferase (PEMT); catalyzes the first step in the conversion of phosphatidylethanolamine to phosphatidylcholine during the methylation pathway of phosphatidylcholine biosynthesis","termid":"PBO:0085313"}


id: PBO:0063523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDYN antisense RNA 1","termid":"PBO:0063523"}


id: MONDO:0007842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of Ehlers-Danlos syndrome characterized by generalized joint hypermobility often complicated by dislocation of major joints, particularly the shoulder but in some cases the kneecap. Congenital hip dislocation has also been frequently reported. The syndrome has been described in several families. It is transmitted as an autosomal dominant trait, with high penetrance.","definition_xrefs":["Orphanet:2295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"joint laxity, familial","secondary_identifiers":["MESH:C535884","GARD:3054","SCTID:71322004","MEDGEN:120629","UMLS:C0268349","OMIM:147900"],"synonyms":[{"name":"EDS 11 (formerly)","type":"related"},{"name":"EDS XI","type":"exact"},{"name":"EDS Xi","type":"related"},{"name":"EDS Xi, formerly","type":"related"},{"name":"EDS11","type":"related"},{"name":"EDS11, formerly","type":"related"},{"name":"Ehlers-Danlos syndrome type 11, formerly","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 11 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, type Xi","type":"related"},{"name":"Ehlers-Danlos syndrome, type Xi, formerly","type":"related"},{"name":"Joint instability syndrome","type":"exact"},{"name":"articular hypermobility syndrome","type":"related"},{"name":"familial joint instability syndrome","type":"exact"},{"name":"familial joint laxity","type":"exact"},{"name":"joint laxity, familial","type":"exact"}],"termid":"MONDO:0007842","xrefs":{"Monarch":{"xref_id":"0007842"}}}


id: PBO:0042471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 8","termid":"PBO:0042471"}


id: PBO:0060047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 35","termid":"PBO:0060047"}


id: PBO:0084970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(+)-dependent glutamate dehydrogenase; degrades glutamate to ammonia and alpha-ketoglutarate; expression sensitive to nitrogen catabolite repression and intracellular ammonia levels; genetically interacts with GDH3 by suppressing stress-induced apoptosis","termid":"PBO:0084970"}


id: PBO:0067760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 60","termid":"PBO:0067760"}


id: GO:2000954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclodextrin metabolic process","synonyms":[{"name":"regulation of cyclodextrin metabolism","type":"exact"}],"termid":"GO:2000954"}


id: PBO:0068779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 16, pseudogene","termid":"PBO:0068779"}


id: MONDO:0003443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic lesion of the urinary tract transitional cell epithelium characterized by papillary formations. -- 2003","definition_xrefs":["NCIT:C27883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary epithelial neoplasm","termid":"MONDO:0021096"},{"relation_name":"is_a","term_name":"urothelial neoplasm","termid":"MONDO:0024337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary urothelial neoplasm","secondary_identifiers":["MEDGEN:233837","DOID:5433","UMLS:C1335329"],"synonyms":[{"name":"inverted papilloma of urinary tract","type":"related"},{"name":"papillary transitional cell neoplasm of the urinary tract","type":"exact"},{"name":"papillary urothelial neoplasm","type":"exact"},{"name":"urinary tract papillary transitional cell benign neoplasm","type":"related"},{"name":"urinary tract papillary transitional cell neoplasm","type":"exact"},{"name":"urothelium papillary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0003443","xrefs":{"Monarch":{"xref_id":"0003443"}}}


id: GO:0180005
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111714],"is_not":false,"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-threonine (consensus YSPTSPS)(position 4) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0004721","GO:0003824","GO:0140096","GO:0016788"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II C-terminal domain T4 phosphatase activity","type":"exact"}],"termid":"GO:0180005","terms_by_termid":{"GO:0180005":null}}


id: PATO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000710 time value (obsolete PATO:0000710)","termid":"PATO:0000710"}


id: GO:0015903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fluconazole into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fluconazole is an antifungal drug used for oral candidiasis and cryptococcal meningitis; it is still under study for treatment of vaginal candidiasis and other fungal infections.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"fluconazole transport","termid":"GO:0015903"}


id: GO:0061979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of femoral head articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20097540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hip joint articular cartilage development","termid":"GO:0061977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"femoral head articular cartilage development","termid":"GO:0061979"}


id: PATO:0001689
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elevation which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased position","termid":"PATO:0001476"},{"relation_name":"is_a","term_name":"elevation","termid":"PATO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased elevation","synonyms":[{"name":"low elevation","type":"exact"}],"termid":"PATO:0001689"}


id: PBO:0050766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 28","termid":"PBO:0050766"}


id: PBO:0049100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 157","termid":"PBO:0049100"}


id: PBO:0071794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p40","termid":"PBO:0071794"}


id: PBO:0073003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 3","termid":"PBO:0073003"}


id: PBO:0043215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 2","termid":"PBO:0043215"}


id: PBO:0070592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 58","termid":"PBO:0070592"}


id: GO:0030122
data:
  {"annotated_genes":["SJAG_02805","SJAG_00800","SJAG_01167","SJAG_00104"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58380,74160,77879,108084],"is_not":false,"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A heterotetrameric AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits, and links clathrin to the membrane surface of a vesicle, and the cargo receptors during receptor/clathrin mediated endocytosis. Vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles. In at least humans, the AP-2 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different alpha genes (alphaA and alphaC).","definition_xrefs":["PMID:10611976","PMID:22022230","PMID:21097499","PMID:24322426","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin adaptor complex","termid":"GO:0030131"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"clathrin coat of endocytic vesicle","termid":"GO:0030128"},{"relation_name":"part_of","term_name":"clathrin coat of coated pit","termid":"GO:0030132"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0032991","GO:0005886","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"AP-2 adaptor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"HA2","type":"exact"},{"name":"HA2 clathrin adaptor","type":"exact"}],"termid":"GO:0030122","terms_by_termid":{"GO:0030122":null}}


id: PBO:0042543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8 pseudogene 2","termid":"PBO:0042543"}


id: PBO:0088578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase Gde1","termid":"PBO:0088578"}


id: MONDO:0014110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the MIP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 15 multiple types","secondary_identifiers":["OMIM:615274","UMLS:C3809001","MEDGEN:815331","DOID:0110251"],"synonyms":[{"name":"CTRCT15","type":"exact"},{"name":"MIP early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 15, multiple types","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in MIP","type":"exact"}],"termid":"MONDO:0014110","xrefs":{"Monarch":{"xref_id":"0014110"}}}


id: PBO:0088111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase Y; processed to mature form by Prb1p","termid":"PBO:0088111"}


id: GO:0102923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-N-debenzoyltaxol + benzoyl-CoA = CoA + H+ + taxol.","definition_xrefs":["RHEA:33687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8859"],"termid":"GO:0102923"}


id: GO:0102972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A12 + 2-oxoglutarate + O2 = gibberellin A110 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A12,2-oxoglutarate:oxygen oxidoreductase activity (gibberellin A110-forming) (obsolete GO:0102972)","termid":"GO:0102972"}


id: PBO:0089656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37a","termid":"PBO:0089656"}


id: PBO:0071491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 32","termid":"PBO:0071491"}


id: PBO:0110117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0110117"}


id: GO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"In organisms that undergo pheromone-induced unidirectional conjugation, the process involved in desensitization following exposure to pheromone stimulus that acts to down-regulate further stimulation or block initial conjugation responses.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative adaptation of signaling pathway","termid":"GO:0022401"},{"relation_name":"part_of","term_name":"response to pheromone regulating pheromone-induced unidirectional conjugation","termid":"GO:0000765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative adaptation of signaling pathway by response to pheromone involved in pheromone-induced unidirectional conjugation","synonyms":[{"name":"adaptation to pheromone during pheromone-induced unidirectional conjugation","type":"related"},{"name":"desensitization to pheromone during pheromone-induced unidirectional conjugation","type":"exact"},{"name":"negative adaptation of signalling pathway by response to pheromone involved in pheromone-induced unidirectional conjugation","type":"exact"}],"termid":"GO:0000766"}


id: PBO:0000586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-F0 ATPase assembly protein (predicted)","termid":"PBO:0000586"}


id: PBO:0072442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 6","termid":"PBO:0072442"}


id: PBO:0048549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G elongation factor mitochondrial 1","termid":"PBO:0048549"}


id: PBO:0087611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex; required for Set1C stability and optimal activity; COMPASS methylates histone H3 on lys 4 and is involved in telomeric silencing; subunit of CPF (cleavage and polyadenylation factor), a complex involved in RNAP II transcription termination","termid":"PBO:0087611"}


id: PBO:0061032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NINJ2 antisense RNA 1","termid":"PBO:0061032"}


id: GO:0015615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-allose(out) = ADP + phosphate + D-allose(in).","definition_xrefs":["PMID:9401019","RHEA:29799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type D-allose transporter activity","secondary_identifiers":["EC:7.5.2.8"],"synonyms":[{"name":"D-allose porter activity","type":"broad"},{"name":"D-allose-importing ATPase activity","type":"related"}],"termid":"GO:0015615"}


id: FYPO:0001416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfide:quinone oxidoreductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal sulfide:quinone oxidoreductase activity","termid":"FYPO:0001415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased sulfide:quinone oxidoreductase activity","synonyms":[{"name":"decreased sulfide-quinone reductase activity","type":"exact"},{"name":"decreased sulfide:quinone reductase activity","type":"exact"},{"name":"decreased sulphide:quinone oxidoreductase activity","type":"exact"},{"name":"reduced sulfide:quinone oxidoreductase activity","type":"exact"}],"termid":"FYPO:0001416"}


id: MONDO:0016300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete transposition of the great arteries (obsolete MONDO:0016300)","termid":"MONDO:0016300","xrefs":{"Monarch":{"xref_id":"0016300"}}}


id: PBO:0042390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member d","termid":"PBO:0042390"}


id: PBO:0083036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta(9) fatty acid desaturase; required for monounsaturated fatty acid synthesis and for normal distribution of mitochondria","termid":"PBO:0083036"}


id: GO:1902643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22562153","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid catabolic process","termid":"GO:0060697"},{"relation_name":"is_a","term_name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902641"},{"relation_name":"positively_regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","synonyms":[{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"narrow"},{"name":"activation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"narrow"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"up regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"up-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"upregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1902643"}


id: GO:0010188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a microbial phytotoxin stimulus. A microbial phytotoxin is a chemical substance produced by microbes which is toxic to plants.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to microbial phytotoxin","termid":"GO:0010188"}


id: GO:0031796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 metabotropic GABA receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled GABA receptor binding","termid":"GO:0031795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1 metabotropic GABA receptor binding","synonyms":[{"name":"type 1 metabotropic GABA receptor ligand","type":"narrow"}],"termid":"GO:0031796"}


id: PBO:0069620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 897, pseudogene","termid":"PBO:0069620"}


id: GO:1990802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation that is required for DNA double-strand break processing.","definition_xrefs":["GO_REF:0000060","GOC:rb","PMID:21841787","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in DNA double-strand break processing (obsolete GO:1990802)","synonyms":[{"name":"protein amino acid phosphorylation involved in DNA double-strand break processing","type":"exact"}],"termid":"GO:1990802"}


id: MONDO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign lesion composed of dilated lymphatic channels. Painless swelling is the usual clinical manifestation.","definition_xrefs":["NCIT:C8965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"lymphatic vessel neoplasm","termid":"MONDO:0036870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphangioma","secondary_identifiers":["GARD:9789","MESH:D008202","NANDO:2201032","ICD9:228.1","Orphanet:2415","SCTID:254836000","SCTID:400178008","UMLS:C0024221","ICDO:9170/0","MEDGEN:6153","DOID:1475"],"synonyms":[{"name":"LM","type":"related"},{"name":"benign lymphangioma","type":"exact"},{"name":"benign lymphangioma (morphologic abnormality)","type":"exact"},{"name":"congenital lymphangioma","type":"narrow"},{"name":"lymphangioma","type":"exact"},{"name":"lymphangioma, benign","type":"exact"}],"termid":"MONDO:0002013","xrefs":{"Monarch":{"xref_id":"0002013"}}}


id: SO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":".","definition_xrefs":["SO:ma"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000311 computed_feature_by_similarity (obsolete SO:0000311)","termid":"SO:0000311"}


id: GO:0052042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont gene product activates host programmed cell death, leading to an increase in the frequency, rate or extent of programmed cell death in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host programmed cell death","termid":"GO:0052040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host programmed cell death","secondary_identifiers":["GO:0052044","GO:0052045","GO:0052397","GO:0012504","GO:0052153","GO:0052400"],"synonyms":[{"name":"activation by organism of host programmed cell death","type":"exact"},{"name":"activation by organism of non-apoptotic programmed cell death in other organism","type":"narrow"},{"name":"activation by organism of programmed cell death in other organism during symbiotic interaction","type":"exact"},{"name":"activation by symbiont of host programmed cell death","type":"narrow"},{"name":"enhancement of host programmed cell death","type":"exact"},{"name":"enhancement of host programmed cell death by organism","type":"exact"},{"name":"induction by organism of non-apoptotic programmed cell death in other organism during symbiotic interaction","type":"narrow"},{"name":"induction by organism of programmed cell death in other organism during symbiotic interaction","type":"related"},{"name":"induction by organism of programmed cell death in other organism involved in symbiotic interaction","type":"exact"},{"name":"induction by symbiont of host programmed cell death","type":"exact"},{"name":"induction of non-apoptotic programmed cell death by other organism","type":"related"},{"name":"pathogenesis","type":"related"},{"name":"positive regulation by symbiont of host non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation by symbiont of host programmed cell death","type":"exact"},{"name":"stimulation by symbiont of host programmed cell death","type":"narrow"},{"name":"upregulation by symbiont of host programmed cell death","type":"exact"}],"termid":"GO:0052042"}


id: PBO:0066186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 8B pseudogene","termid":"PBO:0066186"}


id: FYPO:0006529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to centromere during meiotic cell cycle","synonyms":[{"name":"abnormal protein localisation to centromere during meiotic cell cycle","type":"exact"},{"name":"abnormal protein localisation to chromosome, centromeric region during meiotic cell cycle","type":"exact"},{"name":"abnormal protein localization to chromosome, centric region during meiotic cell cycle","type":"exact"},{"name":"abnormal protein localization to chromosome, centromeric region during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006529"}


id: PBO:0054819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2232","termid":"PBO:0054819"}


id: MONDO:1012680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited rickets that occurs in domestic cats due to a mutation in the VDR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D-dependent rickets, VDR-related, cat","secondary_identifiers":["OMIA:001431-9685"],"synonyms":[{"name":"vitamin D-deficiency rickets, type II, domestic cat","type":"related"}],"termid":"MONDO:1012680","xrefs":{"Monarch":{"xref_id":"1012680"}}}


id: GO:0017174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + glycine = S-adenosyl-L-homocysteine + sarcosine.","definition_xrefs":["EC:2.1.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"glycine N-methyltransferase activity","secondary_identifiers":["MetaCyc:GLYCINE-N-METHYLTRANSFERASE-RXN","RHEA:19937","KEGG_REACTION:R00367","Reactome:R-HSA-6798317"],"synonyms":[{"name":"GNMT","type":"related"},{"name":"S-adenosyl-L-methionine:glycine N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:glycine methyltransferase activity","type":"related"},{"name":"glycine methyltransferase activity","type":"related"}],"termid":"GO:0017174"}


id: GO:0035492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the synthesis or release of any leukotriene following a stimulus as part of an inflammatory response.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukotriene production involved in inflammatory response","termid":"GO:0035490"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"leukotriene production involved in inflammatory response","termid":"GO:0002540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukotriene production involved in inflammatory response","termid":"GO:0035492"}


id: PBO:0066347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 domain containing 1","termid":"PBO:0066347"}


id: PBO:0082345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent Lon protease; involved in degradation of misfolded mitochondrial proteins; required for mitochondrial maintenance and biogenesis; regulates mitochondrial DNA copy number with Mrx6p; subunit of a complex containing Mrx6p, Pet20p, and Mam33p that may regulate mtDNA replication; protease-independent, chaperone-like function in mitochondrial membrane complex assembly; localizes to the mitochondrial matrix","termid":"PBO:0082345"}


id: MONDO:0003043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare malignant tumor of soft tissue characterized by a bimorphic pattern composed of undifferentiated small round cells and islands of well differentiated hyaline cartilage.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete extraskeletal mesenchymal chondrosarcoma (obsolete MONDO:0003043)","secondary_identifiers":["NCIT:C27481","SCTID:404080006","DOID:4548","ICD9:171.9"],"synonyms":[{"name":"mesenchymal extraosseous chondrosarcoma","type":"exact"},{"name":"mesenchymal extraskeletal chondrosarcoma","type":"exact"}],"termid":"MONDO:0003043","xrefs":{"Monarch":{"xref_id":"0003043"}}}


id: GO:0140192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of an adenylate cyclase-activating adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process (obsolete GO:0140192)","termid":"GO:0140192"}


id: GO:0042838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-glucarate, the D-enantiomer of glucarate.","definition_xrefs":["GOC:mah","GOC:jsg","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"glucarate catabolic process","termid":"GO:0019394"},{"relation_name":"is_a","term_name":"D-glucarate metabolic process","termid":"GO:0042836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-glucarate catabolic process","synonyms":[{"name":"D-glucarate breakdown","type":"exact"},{"name":"D-glucarate catabolism","type":"exact"},{"name":"D-glucarate degradation","type":"exact"},{"name":"saccharate catabolic process","type":"exact"},{"name":"saccharate catabolism","type":"exact"}],"termid":"GO:0042838"}


id: SO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding locus that originates from within the promoter region of a protein-coding gene, with transcription proceeding in the opposite direction on the other strand.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_promoter_lncRNA_gene","synonyms":[{"name":"bidirectional promoter lncRNA","type":"exact"},{"name":"bidirectional promoter lncRNA gene","type":"exact"},{"name":"bidirectional_promoter_lncRNA_gene","type":"exact"}],"termid":"SO:0002185"}


id: PBO:0017497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transmembrane transporter (predicted)","termid":"PBO:0017497"}


id: PATO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards to point of attachment or origin.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised proximally","termid":"PATO:0002179"}


id: PBO:0013018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase ptl3","termid":"PBO:0013018"}


id: PBO:0071928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 5","termid":"PBO:0071928"}


id: PBO:0040304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase secretory pathway Ca2+ transporting 2","termid":"PBO:0040304"}


id: GO:0150073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["PMID:26670206","GOC:bc","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein-glutamine gamma-glutamyltransferase activity (obsolete GO:0150073)","termid":"GO:0150073"}


id: GO:0052595
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide + H+.","definition_xrefs":["MetaCyc:AMINEOXID-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","termid":"GO:0016641"},{"relation_name":"is_a","term_name":"aliphatic amine dehydrogenase activity","termid":"GO:0030058"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aliphatic amine oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aliphatic-amine oxidase activity","type":"exact"},{"name":"aliphatic-amine:oxygen oxidoreductase(deaminating) activity","type":"exact"}],"termid":"GO:0052595","terms_by_termid":{"GO:0043799":null}}


id: MONDO:0025382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Connective tissue tumors, affecting primarily fowl, that are usually caused by avian sarcoma viruses.","definition_xrefs":["MESH:D001357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma, avian","synonyms":[{"name":"Avian sarcoma","type":"related"},{"name":"Avian sarcomas","type":"related"},{"name":"Rous sarcoma","type":"related"},{"name":"sarcoma, Rous","type":"related"},{"name":"sarcomas, Avian","type":"related"}],"termid":"MONDO:0025382","xrefs":{"Monarch":{"xref_id":"0025382"}}}


id: PATO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality of the thermal energy of a system.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature","termid":"PATO:0000146"}


id: PBO:0043019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHM Rab escort protein","termid":"PBO:0043019"}


id: PBO:0002954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein","termid":"PBO:0002954"}


id: MONDO:0003360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the small intestine. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C7085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestinal sarcoma","termid":"MONDO:0003361"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"mesenchymal tumor of small intestine","termid":"MONDO:0018506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"small intestine leiomyosarcoma","secondary_identifiers":["SCTID:716651004","UMLS:C0920305","GARD:19852","MEDGEN:183086","DOID:5271","Orphanet:104076"],"synonyms":[{"name":"leiomyosarcoma of small bowel","type":"exact"},{"name":"leiomyosarcoma of small intestine","type":"exact"},{"name":"leiomyosarcoma of the small bowel","type":"exact"},{"name":"leiomyosarcoma of the small intestine","type":"exact"},{"name":"small bowel leiomyosarcoma","type":"exact"},{"name":"small intestinal leiomyosarcoma","type":"exact"},{"name":"small intestine leiomyosarcoma","type":"exact"},{"name":"smooth muscle connective tissue tumor","type":"related"},{"name":"smooth muscle connective tissue tumour","type":"related"}],"termid":"MONDO:0003360","xrefs":{"Monarch":{"xref_id":"0003360"}}}


id: SO:0000510
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in partially rearranged genomic DNA including L-part1, V-intron and V-D-exon, with the 5' UTR (SO:0000204) and 3' UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VD_gene_segment","synonyms":[{"name":"VD gene","type":"exact"},{"name":"V_D_GENE","type":"exact"}],"termid":"SO:0000510"}


id: MONDO:1010537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megacolon that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megacolon, non-human animal","termid":"MONDO:1010039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megacolon, pig","secondary_identifiers":["OMIA:000629-9823"],"termid":"MONDO:1010537","xrefs":{"Monarch":{"xref_id":"1010537"}}}


id: MONDO:0044748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of cattle caused by parasitization of the red blood cells by bacteria of the genus ANAPLASMA.","definition_xrefs":["MESH:D000712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease, non-human animal","termid":"MONDO:0700113"},{"relation_name":"is_a","term_name":"tick-borne infectious disease, non-human animal","termid":"MONDO:0700201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplasmosis in cattle","synonyms":[{"name":"Anaplasmoses","type":"related"}],"termid":"MONDO:0044748","xrefs":{"Monarch":{"xref_id":"0044748"}}}


id: PBO:0042668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 2","termid":"PBO:0042668"}


id: GO:0050858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B- or T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050854"},{"relation_name":"negatively_regulates","term_name":"antigen receptor-mediated signaling pathway","termid":"GO:0050851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen receptor-mediated signaling pathway","synonyms":[{"name":"down regulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"down-regulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"downregulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"inhibition of antigen receptor-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of antigen receptor mediated signalling pathway","type":"exact"}],"termid":"GO:0050858"}


id: PBO:0056726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MER proto-oncogene, tyrosine kinase","termid":"PBO:0056726"}


id: GO:0097538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located on the cilium membrane in the ciliary transition zone; it is connected to the cilium axoneme via Y-shaped links.","definition_xrefs":["PMID:22653444","PMID:4554367","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"},{"relation_name":"part_of","term_name":"ciliary membrane","termid":"GO:0060170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"ciliary necklace","synonyms":[{"name":"cilial necklace","type":"exact"},{"name":"cilium necklace","type":"exact"}],"termid":"GO:0097538"}


id: PBO:0066823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 122","termid":"PBO:0066823"}


id: MONDO:0009477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive congenital disorder affecting multiple systems with features of a ciliopathy. Affected individuals typically have some type of intestinal atresia, variable ocular abnormalities, microcephaly, and sometimes involvement of other systems, including renal and cardiac. In some cases, the condition is lethal in early life, whereas other patients show normal survival with or without mild cognitive impairment (summary by Filges et al., 2016).","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"},{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stromme syndrome","secondary_identifiers":["OMIM:243605","Orphanet:506307","DOID:0110595","MESH:C565460","GARD:17945","OMIM:616369","MEDGEN:340938","Orphanet:444069","UMLS:C1855705","EFO:0009160"],"synonyms":[{"name":"CILD31","type":"exact"},{"name":"STROMS","type":"related"},{"name":"Stromme syndrome","type":"exact"},{"name":"apple peel syndrome with microcephaly and ocular anomalies","type":"exact"},{"name":"apple-peel intestinal atresia-ocular anomalies-microcephaly syndrome","type":"exact"},{"name":"ciliary dyskinesia, primary, 31","type":"related"},{"name":"ciliary dyskinesia, primary, 31, formerly","type":"related"},{"name":"ciliary dyskinesia, primary, type 31","type":"exact"},{"name":"jejunal atresia with microcephaly and ocular anomalies","type":"exact"},{"name":"jejunal atresia-microcephaly-ocular anomalies syndrome","type":"exact"},{"name":"lethal fetal brain malformation-duodenal atresia-bilateral renal hypoplasia syndrome","type":"exact"},{"name":"lethal foetal brain malformation-duodenal atresia-bilateral renal hypoplasia syndrome","type":"exact"},{"name":"primary ciliary dyskinesia 31","type":"exact"}],"termid":"MONDO:0009477","xrefs":{"Monarch":{"xref_id":"0009477"}}}


id: SO:0002070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of an Alu mobile element with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alu_deletion","termid":"SO:0002070"}


id: MONDO:0015104
data:
  {"annotated_genes":["SJAG_04109"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"}]},"cv_name":"mondo","definition":"The most common form of chronic hepatic porphyria. It is characterized by bullous photodermatitis.","definition_xrefs":["Orphanet:101330"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited porphyria","termid":"MONDO:0019142"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genodermatosis with ocular features (obsolete MONDO:0020266)","termid":"MONDO:0020266"},{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"hepatic porphyria","termid":"MONDO:0002520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04109":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005093","MONDO:0005066","MONDO:0002515"],"is_obsolete":false,"name":"porphyria cutanea tarda","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3132","MedDRA:10036183","UMLS:C0162566","SCTID:61860000","MEDGEN:56453","NANDO:2201267","GARD:7433","icd11.foundation:370983230","NANDO:1200816","ONCOTREE:PCT","MESH:D017119","NCIT:C27725"],"synonyms":[{"name":"PCT","type":"exact"},{"name":"porphyria cutania tarda","type":"related"}],"termid":"MONDO:0015104","terms_by_termid":{"MONDO:0008296":null},"xrefs":{"Monarch":{"xref_id":"0015104"}}}


id: FYPO:0003735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a gene product that normally binds to a specific DNA sequence instead binds to a different sequence when a gene is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:7651412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000653","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"altered DNA binding specificity","synonyms":[{"name":"abnormal DNA binding specificity","type":"exact"}],"termid":"FYPO:0003735"}


id: PBO:0067344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 441, pseudogene","termid":"PBO:0067344"}


id: MONDO:0968955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta","termid":"MONDO:0019507"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocalcified amelogenesis imperfecta","secondary_identifiers":["Orphanet:100032","MEDGEN:140773","icd11.foundation:1793262466","GARD:16931","UMLS:C0399376"],"synonyms":[{"name":"amelogenesis imperfecta type 3","type":"exact"}],"termid":"MONDO:0968955","xrefs":{"Monarch":{"xref_id":"0968955"}}}


id: MONDO:0043139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"visual epilepsy","termid":"MONDO:0001386"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"microcephaly sparse hair intellectual disability seizures","secondary_identifiers":["MESH:C537545","UMLS:C2931530","MEDGEN:444077"],"termid":"MONDO:0043139","xrefs":{"Monarch":{"xref_id":"0043139"}}}


id: MONDO:0012769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 14","secondary_identifiers":["UMLS:C2677772","GARD:15537","MESH:C567448","MEDGEN:393832","OMIM:611958"],"synonyms":[{"name":"HPC14","type":"exact"},{"name":"prostate cancer, hereditary, 14","type":"exact"}],"termid":"MONDO:0012769","xrefs":{"Monarch":{"xref_id":"0012769"}}}


id: GO:0009340
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme, which in most bacterial species is composed of two subunits, ParC and ParE. Functions in chromosome segregation and can relax supercoiled DNA.","definition_xrefs":["GOC:jl","PMID:7783632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex","termid":"GO:0009330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA topoisomerase IV complex","termid":"GO:0009340"}


id: FYPO:0002086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicles present in increased numbers","termid":"FYPO:0003416"},{"relation_name":"output_of","term_name":"abnormal exocytosis during vegetative growth","termid":"FYPO:0002089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"exocytic vesicles present in increased numbers","synonyms":[{"name":"accumulation of exocytic vesicles","type":"related"},{"name":"additional exocytic vesicles present","type":"exact"},{"name":"exocytic vesicles present in greater numbers","type":"exact"},{"name":"exocytic vesicles present in increased numbers during mitotic cell cycle","type":"related"},{"name":"exocytic vesicles present in increased numbers during vegetative growth","type":"exact"},{"name":"exocytotic vesicles present in increased numbers","type":"exact"},{"name":"extra exocytic vesicles","type":"exact"},{"name":"post-Golgi secretory vesicles present in increased numbers","type":"related"}],"termid":"FYPO:0002086"}


id: PBO:0080375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog B","termid":"PBO:0080375"}


id: PBO:0013107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3B","termid":"PBO:0013107"}


id: FYPO:0006072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' end of a small RNA (sRNA) molecule does not occur.","definition_xrefs":["PMID:28541282","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished small RNA 3' uridylation","synonyms":[{"name":"abolished sRNA 3' uridylation","type":"exact"},{"name":"abolished small RNA 3' uridylation during mitotic cell cycle","type":"related"},{"name":"abolished small RNA 3' uridylation during vegetative growth","type":"exact"},{"name":"abolished small regulatory RNA 3' uridylation","type":"exact"},{"name":"small RNA 3' uridylation abolished","type":"exact"}],"termid":"FYPO:0006072"}


id: PATO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density which is lower relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"dense","termid":"PATO:0001164"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased mass density","synonyms":[{"name":"low density","type":"exact"}],"termid":"PATO:0001790"}


id: MONDO:0018257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of syringomyelia that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary syringomyelia","termid":"MONDO:0020508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial syringomyelia","secondary_identifiers":["GARD:21589","MEDGEN:1842994","UMLS:C5680970","Orphanet:370034"],"synonyms":[{"name":"hereditary syringomyelia","type":"exact"}],"termid":"MONDO:0018257","xrefs":{"Monarch":{"xref_id":"0018257"}}}


id: PBO:0058715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6843","termid":"PBO:0058715"}


id: MONDO:0013801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the SCN8A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0004736","MONDO:0005066","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 13","secondary_identifiers":["UMLS:C3281191","DOID:0080445","SCTID:765170001","MEDGEN:482821","OMIM:614558","GARD:13085"],"synonyms":[{"name":"DEE13","type":"exact"},{"name":"EIEE13","type":"exact"},{"name":"SCN8A early infantile epileptic encephalopathy","type":"exact"},{"name":"SCN8A encephalopathy","type":"related"},{"name":"SCN8A epilepsy","type":"related"},{"name":"developmental and epileptic encephalopathy 13","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in SCN8A","type":"exact"},{"name":"early infantile epileptic encephalopathy-13","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 13","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 13","type":"exact"}],"termid":"MONDO:0013801","xrefs":{"Monarch":{"xref_id":"0013801"}}}


id: PR:P30597
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chs1 gene.","definition_xrefs":["UniProtKB:P30597","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.12c","synonyms":[{"name":"Spom972h-chs1","type":"exact"},{"name":"chitin-UDP acetyl-glucosaminyl transferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30597"}


id: PBO:0085677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in pre-rRNA processing; associated with U3 snRNP; component of small ribosomal subunit (SSU) processosome; ortholog of the human U3-55k protein","termid":"PBO:0085677"}


id: PBO:0011985
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although this is demonstrated to be DNA polymerase epsilon interactor and names Dpb3, it appears to be the ortholog of S. cerevisie BUR6 and human DRAP1 (supported by PSIblast/ Treefam). The real Dpb3 appears to be the newly identified SPCC16C4.22 see Treefam:TF103009","termid":"PBO:0011985"}


id: PR:Q9HDU6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pan5 gene.","definition_xrefs":["UniProtKB:Q9HDU6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-dehydropantoate 2-reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.09c","synonyms":[{"name":"KPA reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"KPR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pan5","type":"exact"},{"name":"ketopantoate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDU6"}


id: GO:0009633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete drought tolerance (obsolete GO:0009633)","synonyms":[{"name":"drought tolerance","type":"exact"}],"termid":"GO:0009633"}


id: PBO:0066461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REX4 homolog, 3'-5' exonuclease","termid":"PBO:0066461"}


id: GO:0015567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of alkanes from one side of a membrane to the other. Alkanes are saturated aliphatic hydrocarbon compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"alkane transmembrane transporter activity","termid":"GO:0015567"}


id: GO:0030049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated.","definition_xrefs":["ISBN:0815316194","GOC:mah","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-myosin filament sliding","termid":"GO:0033275"},{"relation_name":"part_of","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle filament sliding","secondary_identifiers":["Reactome:R-HSA-390522"],"termid":"GO:0030049"}


id: PBO:0072138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 15","termid":"PBO:0072138"}


id: PBO:0046580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 22","termid":"PBO:0046580"}


id: GO:0099087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a messenger ribonucleoprotein complex along microtubules in axons, towards the presynapse.","definition_xrefs":["PMID:26586091","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"anterograde axonal transport of messenger ribonucleoprotein complex","synonyms":[{"name":"anterograde axonal transport of mRNA RNP complex","type":"exact"}],"termid":"GO:0099087"}


id: PBO:0051301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-39","termid":"PBO:0051301"}


id: PBO:0056676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2A pseudogene 1","termid":"PBO:0056676"}


id: MONDO:0008689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"dehydrated hereditary stomatocytosis","termid":"MONDO:0017910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"dehydrated hereditary stomatocytosis with or without pseudohyperkalemia and/or perinatal edema","secondary_identifiers":["DOID:0111576","GARD:15126","UMLS:C4551512","MEDGEN:1638271","OMIM:194380"],"synonyms":[{"name":"DEHYDRATED hereditary stomatocytosis 1 with or without pseudohyperkalemia and/OR perinatal edema","type":"related"},{"name":"DEHYDRATED hereditary stomatocytosis 1 with or without pseudohyperkalemia and/OR perinatal oedema","type":"related"},{"name":"DEHYDRATED hereditary stomatocytosis with or without pseudohyperkalemia and/or perinatal edema","type":"related"},{"name":"DEHYDRATED hereditary stomatocytosis with or without pseudohyperkalemia and/or perinatal oedema","type":"related"},{"name":"DHS","type":"related"},{"name":"DHS1","type":"related"},{"name":"Dehydrated hereditary stomatocytosis 1 with or without pseudohyperkalemia and/Or perinatal edema","type":"related"},{"name":"Dehydrated hereditary stomatocytosis 1 with or without pseudohyperkalemia and/Or perinatal oedema","type":"related"},{"name":"Dehydrated hereditary stomatocytosis pseudohyperkalemia and perinatal edema","type":"related"},{"name":"Dehydrated hereditary stomatocytosis pseudohyperkalemia and perinatal oedema","type":"related"},{"name":"Desiccytosis, hereditary","type":"related"},{"name":"dehydrated hereditary stomatocytosis","type":"related"},{"name":"dehydrated hereditary stomatocytosis with or without pseudohyperkalemia and/or perinatal edema","type":"exact"},{"name":"pseudohyperkalemia Edinburgh","type":"related"},{"name":"pseudohyperkalemia, familial, 1, due to Red cell leak","type":"related"},{"name":"xerocytosis, hereditary","type":"related"}],"termid":"MONDO:0008689","xrefs":{"Monarch":{"xref_id":"0008689"}}}


id: PBO:0001389
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolf-Hirschhorn syndrome","termid":"PBO:0001389"}


id: GO:0072023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thick ascending limb over time, from its formation to the mature structure. The thick ascending limb is the last part of the loop of Henle. Its thick, mitochondria-rich epithelium characterizes the outer medulla, and is responsible for very avid active salt transport. At the macula densa, the thick ascending limb connects to the distal convoluted tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thick ascending limb development","secondary_identifiers":["GO:0072026"],"synonyms":[{"name":"TAL development","type":"exact"}],"termid":"GO:0072023"}


id: GO:0060326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis","secondary_identifiers":["Reactome:R-HSA-9664424"],"termid":"GO:0060326"}


id: MONDO:0005736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eastern equine encephalitis (EEE) is an acute arboviral infection caused by an alphavirus of the Togaviridae family transmitted by an infected mosquito, that is characterized by the onset of flulike symptoms including fever, chills, weakness, headache, vomiting, abdominal pain with diarrhea, myalgia, leucocytosis, and hematuria, rapidly progressing to diffuse central nervous system (CNS) involvement with confusion, somnolence, or even coma. Seizures, which may progress to status epilepticus and neurologic sequelae, cranial nerve palsies, and photophobia may occur. EEE is associated with a high rate of morbidity and mortality.","definition_xrefs":["Orphanet:83594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eastern equine encephalitis","secondary_identifiers":["MEDGEN:102258","MedDRA:10014587","icd11.foundation:682536148","GARD:10821","ICD9:062.2","EFO:0007242","UMLS:C0153065","DOID:10841","ICD10CM:A83.2","MESH:D020242"],"synonyms":[{"name":"EEE","type":"related"},{"name":"Eastern equine encephalomyelitis","type":"exact"},{"name":"Neuroinvasive Eastern equine encephalitis virus infection","type":"exact"}],"termid":"MONDO:0005736","xrefs":{"Monarch":{"xref_id":"0005736"}}}


id: GO:0098925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Modulation of synaptic transmission by cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by nitric oxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by nitric oxide","termid":"GO:0098924"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by nitric oxide, modulating synaptic transmission","termid":"GO:0099555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by nitric oxide, modulating synaptic transmission","termid":"GO:0098925"}


id: MONDO:0020376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset zonular cataract","termid":"MONDO:0020379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset nuclear cataract","secondary_identifiers":["Orphanet:98991","MedDRA:10007759","MedDRA:10057735","MESH:C563333","MEDGEN:1842550","UMLS:C5681644","GARD:16887"],"termid":"MONDO:0020376","xrefs":{"Monarch":{"xref_id":"0020376"}}}


id: PBO:0071501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 4","termid":"PBO:0071501"}


id: MONDO:0044634
data:
  {"annotated_genes":["SJAG_01521"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85011],"is_not":false,"summary":null,"term":"MONDO:0044634"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01521":null},"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa-hearing loss-premature aging-short stature-facial dysmorphism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081175","MEDGEN:1615526","GARD:17903","OMIM:617763","UMLS:C4540367","Orphanet:494439"],"synonyms":[{"name":"retinitis pigmentosa-deafness-premature aging-short stature-facial dysmorphism syndrome","type":"exact"},{"name":"short stature, hearing loss, retinitis pigmentosa, and distinctive facies","type":"exact"}],"termid":"MONDO:0044634","terms_by_termid":{"MONDO:0044634":null},"xrefs":{"Monarch":{"xref_id":"0044634"}}}


id: MONDO:0040654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of oculocutaneous albinism.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"oculocutaneous albinism","termid":"MONDO:0018910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"autosomal dominant oculocutaneous albinism","secondary_identifiers":["SCTID:79417003","MEDGEN:541335","UMLS:C0268499"],"synonyms":[{"name":"autosomal dominant oculocutaneous albinism","type":"exact"},{"name":"oculocutaneous albinism, autosomal dominant","type":"exact"}],"termid":"MONDO:0040654","xrefs":{"Monarch":{"xref_id":"0040654"}}}


id: PBO:0027530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_chromosome_segregation,_with_binucleate_and_anucleate_compartment_formation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027530"}


id: PR:000050218
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe) that has been ubiquitinated on Lys-15. Example: UniProtKB:P09988, 2-136, Lys-15, MOD:01148.","definition_xrefs":["PomBase:MAH","PRO:CNA","PMID:31468675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Ubiq(K14)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"H3K14ub","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed K14-ubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"hht2/InitMet-/Ubiq:(K15)","type":"exact"},{"name":"hht2/Ubiq(K14)","type":"exact"}],"termid":"PR:000050218"}


id: GO:0000930
data:
  {"annotated_genes":["SJAG_02609","SJAG_00856","SJAG_02886","SJAG_01756","SJAG_07018","SJAG_02431","SJAG_03835","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100736,78736,99838,97399,110324,116928,109346,106200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000931"},{"annotations":[108595,109347,100737,110325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008275"}]},"cv_name":"cellular_component","definition":"A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species.","definition_xrefs":["GOC:clt","PMID:12134075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02431":null,"SJAG_02609":null,"SJAG_02886":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015630"],"is_obsolete":false,"name":"gamma-tubulin complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000930","terms_by_termid":{"GO:0000931":null,"GO:0008275":null}}


id: GO:0102447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rhamnetin + S-adenosyl-L-methionine = H+ + rhamnacene + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"rhamnetin 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13933"],"termid":"GO:0102447"}


id: PR:Q9UUJ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.14c","synonyms":[{"name":"Spom972h-mrpl25","type":"exact"}],"termid":"PR:Q9UUJ5"}


id: PBO:0053333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 173","termid":"PBO:0053333"}


id: PBO:0072902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 1","termid":"PBO:0072902"}


id: PBO:0049610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 13","termid":"PBO:0049610"}


id: FYPO:0004443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division","type":"exact"},{"name":"reduced protein localization to prospore membrane during meiosis II","type":"exact"}],"termid":"FYPO:0004443"}


id: PBO:0055879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 4B","termid":"PBO:0055879"}


id: MONDO:0019226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of glucose transport.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"is_a","term_name":"carbohydrate transport disease","termid":"MONDO:0045015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glucose transport disorder","secondary_identifiers":["GARD:18957","MEDGEN:1842427","Orphanet:79178","UMLS:C5389835"],"synonyms":[{"name":"inborn error of glucose transport","type":"exact"},{"name":"rare inborn error of glucose transport","type":"related"}],"termid":"MONDO:0019226","xrefs":{"Monarch":{"xref_id":"0019226"}}}


id: MONDO:0100207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy starting in the first 12 months of life, including self-limiting and refractory seizures, and epilepsies with and without developmental disorders.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"infantile-onset epilepsy","termid":"MONDO:0100207","xrefs":{"Monarch":{"xref_id":"0100207"}}}


id: SO:0001241
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that has multiple possible transcription start sites.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_alternate_transcription_start_sites","synonyms":[{"name":"encodes alternate transcription start sites","type":"exact"}],"termid":"SO:0001241"}


id: GO:0019579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aldaric acid catabolic process","synonyms":[{"name":"aldaric acid breakdown","type":"exact"},{"name":"aldaric acid catabolism","type":"exact"},{"name":"aldaric acid degradation","type":"exact"}],"termid":"GO:0019579"}


id: PBO:0034289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_plerology_relationship_with","termid":"PBO:0034289"}


id: GO:0008581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the Gly76-Lys48 isopeptide bond of polyubiquitin.","definition_xrefs":["ISBN:0120793709","MEROPS:c19p001"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-specific protease 5 activity (obsolete GO:0008581)","synonyms":[{"name":"ubiquitin isopeptidase T activity","type":"exact"},{"name":"ubiquitin-specific protease 5 activity","type":"exact"}],"termid":"GO:0008581"}


id: PBO:0085377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane arginine permease; requires phosphatidyl ethanolamine (PE) for localization, exclusively associated with lipid rafts; mutation confers canavanine resistance; CAN1 has a paralog, ALP1, that arose from the whole genome duplication","termid":"PBO:0085377"}


id: PBO:0053481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 456","termid":"PBO:0053481"}


id: PATO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001063 relative flux (obsolete PATO:0001063)","termid":"PATO:0001063"}


id: PBO:0046757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exo/endonuclease G","termid":"PBO:0046757"}


id: GO:0033357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-arabinose, arabino-pentose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose biosynthetic process","termid":"GO:0019567"},{"relation_name":"is_a","term_name":"L-arabinose metabolic process","termid":"GO:0046373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"L-arabinose biosynthetic process","synonyms":[{"name":"L-arabinose anabolism","type":"exact"},{"name":"L-arabinose biosynthesis","type":"exact"},{"name":"L-arabinose formation","type":"exact"},{"name":"L-arabinose synthesis","type":"exact"}],"termid":"GO:0033357"}


id: MONDO:0004749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the myocardium.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart cancer","termid":"MONDO:0001340"},{"relation_name":"is_a","term_name":"neoplasm of myocardium","termid":"MONDO:0021380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005267"],"is_obsolete":false,"name":"myocardium cancer","secondary_identifiers":["UMLS:C0346611","NCIT:C4569","MEDGEN:138067","DOID:9299"],"synonyms":[{"name":"cancer of myocardium","type":"exact"},{"name":"malignant myocardial neoplasm","type":"exact"},{"name":"malignant myocardial tumor","type":"exact"},{"name":"malignant myocardial tumour","type":"exact"},{"name":"malignant myocardium neoplasm","type":"exact"},{"name":"malignant neoplasm of myocardium","type":"exact"},{"name":"malignant neoplasm of the myocardium","type":"exact"},{"name":"malignant tumor of myocardium","type":"exact"},{"name":"malignant tumor of the myocardium","type":"exact"},{"name":"malignant tumour of myocardium","type":"exact"},{"name":"malignant tumour of the myocardium","type":"exact"},{"name":"myocardium cancer","type":"exact"},{"name":"tumor of myocardium","type":"broad"},{"name":"tumour of myocardium","type":"broad"}],"termid":"MONDO:0004749","xrefs":{"Monarch":{"xref_id":"0004749"}}}


id: GO:0031733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR8 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CCR8 chemokine receptor binding","synonyms":[{"name":"CCR8 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031733"}


id: PBO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase Idp1 (predicted)","termid":"PBO:0001945"}


id: SO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of ribosome entry site, specific to Eukaryotic organisms that overlaps part of both 5' UTR and CDS sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome_entry_site","termid":"SO:0000139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kozak_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Kozak_consensus_sequence"],"synonyms":[{"name":"kozak consensus","type":"exact"},{"name":"kozak consensus sequence","type":"exact"},{"name":"kozak sequence","type":"exact"}],"termid":"SO:0001647"}


id: PR:Q9UTI4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- moa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTI4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolar attachment protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.07c","synonyms":[{"name":"Spom972h-moa1","type":"exact"},{"name":"meiotically up-regulated gene 159 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI4"}


id: GO:0036018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an erythropoietin stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to erythropoietin","termid":"GO:0036017"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to erythropoietin","termid":"GO:0036018"}


id: PBO:0065481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2","termid":"PBO:0065481"}


id: MONDO:0016167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Optic pathway glioma (OPG) is a benign tumor that develop along the optic nerve (chiasm, tracts, and radiations) characterized by impairment or loss of vision and may be accompanied by diencephalic symptoms such as reduced growth and alteration in sleeping patterns. OPG are often linked to neurofibromatosis type 1 (NF1).","definition_xrefs":["Orphanet:2086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual pathway disorder","termid":"MONDO:0001834"},{"relation_name":"is_a","term_name":"tumor of cranial and spinal nerves","termid":"MONDO:0016749"},{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic pathway glioma","secondary_identifiers":["NCIT:C8567","icd11.foundation:1000103370","MEDGEN:162950","GARD:4107","UMLS:C0796418"],"synonyms":[{"name":"glioma of optic tract","type":"exact"},{"name":"glioma of the optic tract","type":"exact"},{"name":"glioma of the visual pathway","type":"exact"},{"name":"glioma of visual pathway","type":"exact"},{"name":"optic pathway glioma","type":"exact"},{"name":"optic tract glioma","type":"exact"},{"name":"visual pathway glioma","type":"exact"}],"termid":"MONDO:0016167","xrefs":{"Monarch":{"xref_id":"0016167"}}}


id: GO:0030801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclic nucleotide metabolic process (obsolete GO:0030801)","synonyms":[{"name":"activation of cyclic nucleotide metabolic process","type":"narrow"},{"name":"positive regulation of cyclic nucleotide metabolism","type":"exact"},{"name":"stimulation of cyclic nucleotide metabolic process","type":"narrow"},{"name":"up regulation of cyclic nucleotide metabolic process","type":"exact"},{"name":"up-regulation of cyclic nucleotide metabolic process","type":"exact"},{"name":"upregulation of cyclic nucleotide metabolic process","type":"exact"}],"termid":"GO:0030801"}


id: PBO:0089536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP family protein involved in Golgi vesicle transport Coy1","termid":"PBO:0089536"}


id: GO:0003848
data:
  {"annotated_genes":["SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68747],"is_not":false,"summary":null,"term":"GO:0003848"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + ATP = (2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl diphosphate + AMP + 2 H+.","definition_xrefs":["RHEA:11412","EC:2.7.6.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:H2PTERIDINEPYROPHOSPHOKIN-RXN","KEGG_REACTION:R03503"],"synonyms":[{"name":"2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase activity","type":"exact"},{"name":"6-hydroxymethyl-7,8-dihydropterin diphosphokinase activity","type":"related"},{"name":"6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase activity","type":"related"},{"name":"7,8-dihydro-6-hydroxymethylpterin diphosphokinase activity","type":"related"},{"name":"7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase activity","type":"related"},{"name":"7,8-dihydroxymethylpterin-pyrophosphokinase activity","type":"related"},{"name":"ATP:2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine 6'-diphosphotransferase activity","type":"related"},{"name":"H2-pteridine-CH2OH pyrophosphokinase activity","type":"related"},{"name":"HPPK","type":"related"},{"name":"hydroxymethyldihydropteridine pyrophosphokinase activity","type":"related"}],"termid":"GO:0003848","terms_by_termid":{"GO:0003848":null}}


id: PBO:0088774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Kri1","termid":"PBO:0088774"}


id: PBO:0090529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-C","termid":"PBO:0090529"}


id: GO:0046633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an alpha-beta T cell population by cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"},{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell proliferation","synonyms":[{"name":"alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"alpha-beta T-cell proliferation","type":"exact"},{"name":"alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046633"}


id: PBO:0057648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1244-1","termid":"PBO:0057648"}


id: GO:0010246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of rhamnogalacturonan I component of pectin, a rhamnose-rich pectic polysaccharide.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I metabolic process","termid":"GO:0010395"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan I biosynthetic process","synonyms":[{"name":"rhamnogalacturonan I anabolism","type":"exact"},{"name":"rhamnogalacturonan I biosynthesis","type":"exact"},{"name":"rhamnogalacturonan I formation","type":"exact"},{"name":"rhamnogalacturonan I synthesis","type":"exact"}],"termid":"GO:0010246"}


id: GO:0052536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of systemic acquired resistance in the symbiont organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of systemic acquired resistance in symbiont (obsolete GO:0052536)","synonyms":[{"name":"positive regulation by organism of systemic acquired resistance in symbiont","type":"exact"}],"termid":"GO:0052536"}


id: GO:0019161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha,omega-diamine + 2-oxoglutarate = an omega-aminoaldehyde + L-glutamate.","definition_xrefs":["EC:2.6.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"diamine transaminase activity","secondary_identifiers":["RHEA:18217","MetaCyc:DIAMTRANSAM-RXN"],"synonyms":[{"name":"amine transaminase activity","type":"related"},{"name":"amine-ketoacid transaminase activity","type":"related"},{"name":"diamine aminotransferase activity","type":"exact"},{"name":"diamine-ketoglutaric transaminase activity","type":"related"},{"name":"diamine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0019161"}


id: PBO:0084319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin; involved in nuclear import and export of proteins, including import of replication protein A and export of Far1p and transcription factors Swi5p, Swi6p, Msn2p, and Pho4p; required for re-export of mature tRNAs after their retrograde import from the cytoplasm; exportin-5 homolog","termid":"PBO:0084319"}


id: GO:1990132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The release of misfolded proteins that are being held by the chaperone heat shock protein (Hsp) and targeting them for destruction by the Ub-proteasome machinery.","definition_xrefs":["PMID:23530227","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete release of misfolded protein from chaperone (obsolete GO:1990132)","synonyms":[{"name":"release of misfolded protein from chaperone","type":"exact"}],"termid":"GO:1990132"}


id: MONDO:0014649
data:
  {"annotated_genes":["SJAG_04640"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84894],"is_not":false,"summary":null,"term":"MONDO:0014649"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the EDC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 50","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081213","MEDGEN:906893","GARD:22570","OMIM:616460","UMLS:C4225319"],"synonyms":[{"name":"EDC3 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT50","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in EDC3","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 50","type":"exact"},{"name":"intellectual disability, autosomal recessive 50","type":"exact"},{"name":"intellectual disability, autosomal recessive type 50","type":"exact"},{"name":"mental retardation, autosomal recessive 50","type":"related"},{"name":"mental retardation, autosomal recessive type 50","type":"exact"}],"termid":"MONDO:0014649","terms_by_termid":{"MONDO:0014649":null},"xrefs":{"Monarch":{"xref_id":"0014649"}}}


id: PBO:0067294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 379, pseudogene","termid":"PBO:0067294"}


id: PBO:0114343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator for ribosomal proteins via TOR signaling pathway Crf1/Ifh1","termid":"PBO:0114343"}


id: PBO:0045826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 16","termid":"PBO:0045826"}


id: PATO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being shaped like a lance-head, considerably longer than wide, tapering towards the tip from below the middle together forming three angles; attached at the broad end.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lanceolate","termid":"PATO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lanceolate-triangular","termid":"PATO:0002338"}


id: PBO:0116736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 2","termid":"PBO:0116736"}


id: PBO:0082278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anthranilate synthase; catalyzes the initial step of tryptophan biosynthesis, forms multifunctional hetero-oligomeric anthranilate synthase:indole-3-glycerol phosphate synthase enzyme complex with Trp3p","termid":"PBO:0082278"}


id: PBO:0051162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-43","termid":"PBO:0051162"}


id: MONDO:1010974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic encephalopathy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic encephalopathy, non-human animal","termid":"MONDO:1010230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic encephalopathy, domestic cat","secondary_identifiers":["OMIA:000453-9685"],"termid":"MONDO:1010974","xrefs":{"Monarch":{"xref_id":"1010974"}}}


id: GO:0089715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing N6-threonylcarbamoyladenosine at position 37 = S-adenosyl-L-homocysteine + tRNA containing N6-methylthreonylcarbamoyladenosine at position 37.","definition_xrefs":["PMID:25063302","RHEA:70027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-7114"],"synonyms":[{"name":"tRNA (L-threonylcarbamoyladenosine(37)-C(2)) methyltransferase activity","type":"exact"},{"name":"tRNA (L-threonylcarbamoyladenosine37-C2-) methyltransferase activity","type":"exact"},{"name":"tRNA m6t6A37 methyltransferase activity","type":"exact"}],"termid":"GO:0089715"}


id: GO:0097464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Large complex spine protruding from a dendrite. Each excrescence is formed by a cluster of spine heads.","definition_xrefs":["PMID:730852","NIF_Subcellular:nlx_467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thorny excrescence","termid":"GO:0097464"}


id: MONDO:1012101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic uremic syndrome, non-human animal","termid":"MONDO:1011906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic uremic syndrome, cattle","secondary_identifiers":["OMIA:000435-9913"],"termid":"MONDO:1012101","xrefs":{"Monarch":{"xref_id":"1012101"}}}


id: GO:0072036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"part_of","term_name":"renal vesicle formation","termid":"GO:0072033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in renal vesicle formation","termid":"GO:0072036"}


id: PBO:0059265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L30 pseudogene 2","termid":"PBO:0059265"}


id: PBO:0087305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and TPR protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay; mutations in the human ortholog, TTC37, causes Syndromic diarrhea/Trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0087305"}


id: GO:0001727
data:
  {"annotated_genes":["SJAG_05330","SJAG_04883","SJAG_02429","SJAG_00114","SJAG_01863","SJAG_00638","SJAG_04537","SJAG_01571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76298,92992,71537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004430"},{"annotations":[71258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016303"},{"annotations":[91609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052811"},{"annotations":[72347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000285"},{"annotations":[79130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016308"},{"annotations":[66205,97420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004143"},{"annotations":[109664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141035"},{"annotations":[73519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017050"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of a simple or complex lipid.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00638":null,"SJAG_01571":null,"SJAG_01863":null,"SJAG_02429":null,"SJAG_04537":null,"SJAG_04883":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"lipid kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9695949","Reactome:R-HSA-428273"],"termid":"GO:0001727","terms_by_termid":{"GO:0000285":null,"GO:0004143":null,"GO:0004430":null,"GO:0016303":null,"GO:0016308":null,"GO:0017050":null,"GO:0052811":null,"GO:0141035":null}}


id: PBO:0046333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecto-NOX disulfide-thiol exchanger 2","termid":"PBO:0046333"}


id: GO:0000940
data:
  {"annotated_genes":["SJAG_01224","SJAG_02761","SJAG_01371","SJAG_04076","SJAG_03220","SJAG_04259","SJAG_01211","SJAG_01775","SJAG_05266","SJAG_02814","SJAG_03540","SJAG_01228","SJAG_00418","SJAG_03437","SJAG_05220","SJAG_05319","SJAG_02731","SJAG_02346","SJAG_03683","SJAG_01082","SJAG_00794","SJAG_03327","SJAG_00918"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100133,114239,118397],"is_not":false,"summary":null,"term":"GO:0000940"},{"annotations":[63478,79432,76260,74758,68061,62331,63533,60373,100273,116655],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042729"},{"annotations":[113521,101087],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180019"},{"annotations":[74172,60271,69658,79587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000444"},{"annotations":[75561,74566,75598,76922],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031262"}]},"cv_name":"cellular_component","definition":"The region of a kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions.","definition_xrefs":["GOC:clt","PMID:11483983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000776"}],"interesting_parent_ids":["GO:0032991","GO:0000776","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"outer kinetochore","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000942"],"synonyms":[{"name":"condensed chromosome outer kinetochore","type":"exact"},{"name":"condensed nuclear chromosome outer kinetochore","type":"exact"},{"name":"outer kinetochore of condensed chromosome","type":"exact"},{"name":"outer kinetochore of condensed nuclear chromosome","type":"exact"},{"name":"outer kinetochore plate","type":"narrow"}],"termid":"GO:0000940","terms_by_termid":{"GO:0000444":null,"GO:0000940":null,"GO:0031262":null,"GO:0042729":null,"GO:0180019":null}}


id: MONDO:0012337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glaucoma 1, open angle, I (obsolete MONDO:0012337)","secondary_identifiers":["MESH:C565724","OMIM:609745"],"synonyms":[{"name":"GLC1I","type":"exact"},{"name":"glaucoma 1, open angle, I","type":"exact"}],"termid":"MONDO:0012337","xrefs":{"Monarch":{"xref_id":"0012337"}}}


id: GO:0071573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a shelterin complex. A shelterin complex is a nuclear telomere cap complex that is formed by the association of telomeric ssDNA- and dsDNA-binding proteins with telomeric DNA, and is involved in telomere protection and recruitment of telomerase.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"telomere organization","termid":"GO:0032200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0032200","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"shelterin complex assembly","synonyms":[{"name":"Pot1 complex assembly","type":"related"},{"name":"Pot1-Tpz1 complex assembly","type":"related"},{"name":"shelterin complex formation","type":"related"},{"name":"telosome assembly","type":"exact"}],"termid":"GO:0071573"}


id: PBO:0083228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with YCR047C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083228"}


id: MONDO:0019496
data:
  {"annotated_genes":["SJAG_00260","SJAG_01671","SJAG_03163","SJAG_01895","SJAG_03920","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[86792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[85614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[86938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"}]},"cv_name":"mondo","definition":"Endocrine tumors, also referred to as neuroendocrine tumors (NETs), are defined by a common phenotype which is characterized by the expression of general markers (neuron specific enolase, chromogranin, synaptophysin) and hormone secretion products. These tumors may be localized in any part of the body and are generally discovered in non-specific situations, i.e. not immediately suggestive of NETs (tests for inherited predisposition to tumors or for a clinical syndrome caused by abnormal hormone secretion).","definition_xrefs":["Orphanet:877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03163":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"neuroendocrine neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:209-209.99","GARD:9316","ICD9:239.7","MESH:D018358","ICD9:209","DOID:169","SCTID:255046005","UMLS:C0206754","MEDGEN:64652","NCIT:C188218","NCIT:C3809","EFO:1001901"],"synonyms":[{"name":"APUDoma","type":"exact"},{"name":"neuroendocrine neoplasm","type":"exact"},{"name":"neuroendocrine tumor","type":"exact"},{"name":"neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0019496","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0019496"}}}


id: GO:0110103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A conserved protein complex capable of 5'-3' exoribonuclease activity. It is able to promote RNA polymerase II (RNAPII) transcription termination by degrading pre-mRNA from the newly formed 5' phosphorylated end.","definition_xrefs":["GOC:lnp","PMID:25722373","PMID:23200120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase II termination complex","synonyms":[{"name":"TXT complex","type":"exact"}],"termid":"GO:0110103"}


id: GO:0018484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzaldehyde + NAD+ + H2O = 4-hydroxybenzoate + NADH + H+.","definition_xrefs":["EC:1.2.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["UM-BBD_reactionID:r0273","MetaCyc:HYDROXYBENZALDEHYDE-OXIDATION-NAD-RXN","Reactome:R-HSA-9856794","RHEA:20305"],"synonyms":[{"name":"3-hydroxybenzaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"p-hydroxybenzaldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0018484"}


id: GO:0102562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-beta-L-arabinofuranose + a [protein]-trans-4-hydroxy-L-proline = UDP + H+ + a protein-O-(beta-L-arabinofuranose)-trans-4-hydroxy-L-proline.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete hydroxyproline O-arbinofuranose transferase activity (obsolete GO:0102562)","termid":"GO:0102562"}


id: PBO:0061464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 0 group B member 2","termid":"PBO:0061464"}


id: PBO:0043234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 5","termid":"PBO:0043234"}


id: GO:0016267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 1 O-glycan structure, Gal-beta-(1->3)-GalNAc. Core 1 occurs on most glycoproteins, and is often substituted with sialic acid residues or with various other sugars.","definition_xrefs":["PMID:33775405","GOC:mah","PMID:10580130","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"core 1 O-glycan biosynthetic process","synonyms":[{"name":"O-glycan processing, core 1","type":"exact"},{"name":"core 1 O-glycan biosynthesis","type":"exact"},{"name":"mucin type O-glycosylation","type":"related"}],"termid":"GO:0016267"}


id: MONDO:0031520
data:
  {"annotated_genes":["SJAG_02038","SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012650"},{"annotations":[85420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009973"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02038":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:601457"],"termid":"MONDO:0031520","terms_by_termid":{"MONDO:0009973":null,"MONDO:0012650":null},"xrefs":{"Monarch":{"xref_id":"0031520"}}}


id: GO:0036082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when extracellular phenylacetaldehyde has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:sart","PMID:19135896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"extracellular phenylacetaldehyde-gated monoatomic ion channel activity","synonyms":[{"name":"extracellular phenylacetaldehyde-gated ion channel activity","type":"broad"},{"name":"ionotropic phenylacetaldehyde receptor activity","type":"related"}],"termid":"GO:0036082"}


id: PATO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in an process.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality","termid":"PATO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"process quality","secondary_identifiers":["PATO:0001240","PATO:0001239"],"synonyms":[{"name":"quality of a process","type":"exact"},{"name":"quality of occurrent","type":"exact"},{"name":"quality of process","type":"exact"},{"name":"relational quality of occurrent","type":"exact"}],"termid":"PATO:0001236"}


id: PBO:0067564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 717, pseudogene","termid":"PBO:0067564"}


id: FYPO:0005392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the frequency of DNA recombination is normal (i.e. indistinguishable from wild type) during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA recombination frequency during cellular response to ionizing radiation","synonyms":[{"name":"normal DNA recombination frequency during cellular response to IR","type":"exact"},{"name":"normal DNA recombination frequency during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"normal DNA recombination frequency during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0005392"}


id: PBO:0074797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13B-2","termid":"PBO:0074797"}


id: PBO:0029976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_dephosphorylation","termid":"PBO:0029976"}


id: GO:1901736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (R)-mevalonic acid.","definition_xrefs":["GOC:yaf","UniPathway:UPA00058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"(R)-mevalonic acid metabolic process","termid":"GO:1901735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"(R)-mevalonic acid catabolic process","synonyms":[{"name":"(R)-mevalonate breakdown","type":"exact"},{"name":"(R)-mevalonate catabolism","type":"exact"},{"name":"(R)-mevalonate degradation","type":"exact"},{"name":"(R)-mevalonic acid breakdown","type":"exact"},{"name":"(R)-mevalonic acid catabolism","type":"exact"},{"name":"(R)-mevalonic acid degradation","type":"exact"}],"termid":"GO:1901736"}


id: PBO:0088870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt6","termid":"PBO:0088870"}


id: GO:0047602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetate + H+ = acetone + CO2.","definition_xrefs":["RHEA:19729","EC:4.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"acetoacetate decarboxylase activity","secondary_identifiers":["MetaCyc:ACETOACETATE-DECARBOXYLASE-RXN","KEGG_REACTION:R01366"],"synonyms":[{"name":"acetoacetate carboxy-lyase (acetone-forming)","type":"related"},{"name":"acetoacetate carboxy-lyase activity","type":"related"},{"name":"acetoacetic acid decarboxylase activity","type":"related"}],"termid":"GO:0047602"}


id: GO:1903084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a condensed nuclear chromosome.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","GOC:kmv","PMID:12707312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"},{"relation_name":"is_a","term_name":"protein localization to condensed chromosome","termid":"GO:1903083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to condensed nuclear chromosome","synonyms":[{"name":"protein localisation in condensed nuclear chromosome","type":"exact"},{"name":"protein localisation to condensed nuclear chromosome","type":"exact"},{"name":"protein localization in condensed nuclear chromosome","type":"exact"}],"termid":"GO:1903084"}


id: GO:0034579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: fumarate + n-hexane = (1-methylpentyl)succinate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete (1-methylpentyl)succinate synthase activity (obsolete GO:0034579)","termid":"GO:0034579"}


id: PBO:0059546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Met (AUA/G)","termid":"PBO:0059546"}


id: GO:0015136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of sialic acid from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"}


id: MONDO:0005945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granulomatous disease caused by klebsiella rhinoscleromatis infection. Despite its name, this disease is not limited to the nose and nasopharynx but may affect any part of the respiratory tract, sometimes with extension to the lip and the skin.","definition_xrefs":["MESH:D012226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Klebsiella infectious disease","termid":"MONDO:0030603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhinoscleroma","secondary_identifiers":["SCTID:72409005","UMLS:C0035468","DOID:11336","icd11.foundation:1053615368","ICD9:040.1","EFO:0007470","MEDGEN:20569"],"termid":"MONDO:0005945","xrefs":{"Monarch":{"xref_id":"0005945"}}}


id: PBO:0034330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-derives_into","termid":"PBO:0034330"}


id: GO:1901051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of atropine. Atropine is the racemic mixture of hyoscyamine.","definition_xrefs":["PMID:2879005","GOC:TermGenie","GOC:yaf","PMID:33572199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"atropine biosynthetic process","secondary_identifiers":["GO:1901049"],"synonyms":[{"name":"atropine anabolism","type":"exact"},{"name":"atropine biosynthesis","type":"exact"},{"name":"atropine formation","type":"exact"},{"name":"atropine metabolic process","type":"broad"},{"name":"atropine metabolism","type":"broad"},{"name":"atropine synthesis","type":"exact"},{"name":"hyoscyamine biosynthetic process","type":"exact"}],"termid":"GO:1901051"}


id: FYPO:0001072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which myo-inositol import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal myo-inositol import","synonyms":[{"name":"normal myo-inositol import across plasma membrane","type":"exact"},{"name":"normal myo-inositol import during mitotic cell cycle","type":"related"},{"name":"normal myo-inositol import during vegetative growth","type":"exact"},{"name":"normal myo-inositol import into cell","type":"exact"},{"name":"normal myo-inositol uptake","type":"exact"}],"termid":"FYPO:0001072"}


id: MONDO:0044990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the manus.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete hand disorder (obsolete MONDO:0044990)","secondary_identifiers":["SCTID:118933004"],"synonyms":[{"name":"disease of manus","type":"exact"},{"name":"disease or disorder of manus","type":"exact"},{"name":"disorder of hand","type":"exact"},{"name":"disorder of manus","type":"exact"},{"name":"hand disease","type":"exact"},{"name":"manus disease","type":"exact"},{"name":"manus disease or disorder","type":"exact"}],"termid":"MONDO:0044990","xrefs":{"Monarch":{"xref_id":"0044990"}}}


id: PBO:0083710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in a late step of GPI anchor assembly; involved in the addition of phosphoethanolamine to the multiply mannosylated glycosylphosphatidylinositol (GPI) intermediate; human PIG-Fp is a functional homolog","termid":"PBO:0083710"}


id: GO:0106335
data:
  {"annotated_genes":["SJAG_02042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72174],"is_not":false,"summary":null,"term":"GO:0106335"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(carboxymethyl)uridine34 in tRNA + S-adenosyl-L-methionine = 5-(2-methoxy-2-oxoethyl)uridine34 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:20123966","RHEA:43208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02042":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0140098","GO:0140101","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.1.1.229"],"termid":"GO:0106335","terms_by_termid":{"GO:0106335":null}}


id: GO:0045712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salivary gland determination in a larval organism.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of salivary gland boundary specification","termid":"GO:0045706"},{"relation_name":"is_a","term_name":"regulation of larval salivary gland boundary specification","termid":"GO:0045708"},{"relation_name":"positively_regulates","term_name":"larval salivary gland boundary specification","termid":"GO:0007433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of larval salivary gland boundary specification","synonyms":[{"name":"activation of larval salivary gland determination","type":"narrow"},{"name":"positive regulation of larval salivary gland determination","type":"exact"},{"name":"stimulation of larval salivary gland determination","type":"narrow"},{"name":"up regulation of larval salivary gland determination","type":"exact"},{"name":"up-regulation of larval salivary gland determination","type":"exact"},{"name":"upregulation of larval salivary gland determination","type":"exact"}],"termid":"GO:0045712"}


id: FYPO:0003116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to plumbagin. Cells stop growing (and may die) at a concentration of plumbagin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to plumbagin","synonyms":[{"name":"hypersensitive to plumbagin","type":"exact"},{"name":"sensitive to plumbagin during mitotic cell cycle","type":"related"},{"name":"sensitive to plumbagin during vegetative growth","type":"exact"}],"termid":"FYPO:0003116"}


id: MOD:00687
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and either an alkyl C as in lanthionine, or an aryl C as 2'-(S-cysteinyl)-L-histidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"thioether crosslinked residues","termid":"MOD:00687"}


id: PBO:0036248
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ4","termid":"PBO:0036248"}


id: MONDO:0957097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic-uremic syndrome","termid":"MONDO:0001549"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary hemolytic uremic syndrome","secondary_identifiers":["OMIMPS:235400","GARD:22330","MEDGEN:1825935","Orphanet:576742","UMLS:C5680355"],"synonyms":[{"name":"genetic hemolytic uremic syndrome","type":"exact"}],"termid":"MONDO:0957097","xrefs":{"Monarch":{"xref_id":"0957097"}}}


id: PBO:0034799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex subunit Ufd1 (predicted)","termid":"PBO:0034799"}


id: MONDO:0958096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"monomorphic epitheliotropic intestinal T-cell lymphoma","secondary_identifiers":["NCIT:C96058","Orphanet:652658","MEDGEN:474158","UMLS:C3272525"],"termid":"MONDO:0958096","xrefs":{"Monarch":{"xref_id":"0958096"}}}


id: GO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via an ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class I molecule in the ER. Class I here refers to classical class I molecules.","definition_xrefs":["PMID:14647477","ISBN:0781735149","PMID:15771591","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:0019885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","synonyms":[{"name":"endogenous peptide antigen processing and presentation via MHC class I via ER pathway","type":"exact"}],"termid":"GO:0002484"}


id: PBO:0067937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 239","termid":"PBO:0067937"}


id: MONDO:0017583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mirror polydactyly-vertebral segmentation-limbs defects syndrome is characterized by mirror polydactyly, vertebral hypersegmentation and severe congenital limb deficiencies. Duodenal atresia and absent thymus were also reported. So far, it has been described in four unrelated infants identified through a congenital malformation screening program carried out in Spain. The prevalence was estimated at around 1 in 330,000. The etiology is unknown but it was suggested that the syndrome is caused by defective expression of a developmental control gene.","definition_xrefs":["Orphanet:3004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mirror polydactyly-vertebral segmentation-limbs defects syndrome","secondary_identifiers":["GARD:18784","UMLS:C4275100","MEDGEN:904039"],"termid":"MONDO:0017583","xrefs":{"Monarch":{"xref_id":"0017583"}}}


id: PBO:0079647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 S","termid":"PBO:0079647"}


id: GO:0032744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-20 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-20 production","termid":"GO:0032664"},{"relation_name":"positively_regulates","term_name":"interleukin-20 production","termid":"GO:0032624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-20 production","secondary_identifiers":["GO:0045389"],"synonyms":[{"name":"activation of interleukin-20 production","type":"narrow"},{"name":"positive regulation of IL-20 production","type":"exact"},{"name":"positive regulation of interleukin-20 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-20 production","type":"narrow"},{"name":"up regulation of interleukin-20 production","type":"exact"},{"name":"up-regulation of interleukin-20 production","type":"exact"},{"name":"upregulation of interleukin-20 production","type":"exact"}],"termid":"GO:0032744"}


id: MONDO:0013855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"influenza, severe, susceptibility to","secondary_identifiers":["UMLS:C3553462","MEDGEN:766376","OMIM:614680"],"synonyms":[{"name":"influenza, severe, susceptibility to","type":"exact"},{"name":"susceptibility to severe influenza","type":"related"}],"termid":"MONDO:0013855","xrefs":{"Monarch":{"xref_id":"0013855"}}}


id: PBO:0004438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim22 (predicted)","termid":"PBO:0004438"}


id: GO:0098883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the controlled breakdown of synapse. After it starts the process is continuous until the synapse has disappeared.","definition_xrefs":["PMID:18083105","GOC:dos","PMID:22632716","PMID:29844190","PMID:12062020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"},{"relation_name":"is_a","term_name":"cell junction disassembly","termid":"GO:0150146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synapse pruning","synonyms":[{"name":"synapse clearance","type":"exact"},{"name":"synapse disassembly","type":"exact"},{"name":"synapse elimination","type":"exact"},{"name":"synapse removal","type":"exact"}],"termid":"GO:0098883"}


id: PBO:0076236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 6","termid":"PBO:0076236"}


id: PBO:0084101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanylate kinase; converts GMP to GDP; required for growth and mannose outer chain elongation of cell wall N-linked glycoproteins","termid":"PBO:0084101"}


id: PBO:0059988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 8","termid":"PBO:0059988"}


id: PBO:0111761
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF hand","termid":"PBO:0111761"}


id: PBO:0066440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RETREG1 antisense RNA 1","termid":"PBO:0066440"}


id: PBO:0041601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 12","termid":"PBO:0041601"}


id: GO:0008871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + aminoglycoside = diphosphate + 2''-nucleotidylaminoglycoside.","definition_xrefs":["EC:2.7.7.46","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside nucleotidyltransferase activity","termid":"GO:0034068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"aminoglycoside 2''-nucleotidyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.46-RXN"],"synonyms":[{"name":"2''-aminoglycoside nucleotidyltransferase activity","type":"related"},{"name":"NTP:gentamicin 2''-nucleotidyltransferase activity","type":"narrow"},{"name":"gentamicin 2''- adenylyltransferase activity","type":"narrow"},{"name":"gentamicin 2''-nucleotidyltransferase activity","type":"narrow"},{"name":"gentamycin 2''-nucleotidyltransferase activity","type":"narrow"}],"termid":"GO:0008871"}


id: PBO:0027290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_peroxidase_activity","termid":"PBO:0027290"}


id: PBO:0072623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 10 homolog B","termid":"PBO:0072623"}


id: GO:0048874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells such as the bacteria in the gut.","definition_xrefs":["PMID:25757720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated regulation of intestinal microbiota composition","synonyms":[{"name":"homeostasis of number of cells in a free-living population","type":"related"},{"name":"host-induced regulation of intestinal microbiota composition","type":"related"}],"termid":"GO:0048874"}


id: MONDO:1011426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctionalis epidermolysis bullosa that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, non-human animal","termid":"MONDO:1010129"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctionalis epidermolysis bullosa , non-human animal","secondary_identifiers":["OMIA:000342"],"termid":"MONDO:1011426","xrefs":{"Monarch":{"xref_id":"1011426"}}}


id: PBO:0041940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 8","termid":"PBO:0041940"}


id: PBO:0004247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reiske ISP-associated protein, ubiquinol-cytochrome-c reductase complex subunit Qcr10 (predicted)","termid":"PBO:0004247"}


id: PBO:0066554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 17 pseudogene 1","termid":"PBO:0066554"}


id: PATO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is 90 degrees to another entity.","definition_xrefs":["thesaurus.math:thesaurus.math"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right angle to","termid":"PATO:0001321"}


id: PBO:0041714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 5","termid":"PBO:0041714"}


id: SO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene suspected of being involved in the expression of a trait.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate_gene","synonyms":[{"name":"candidate gene","type":"exact"},{"name":"target gene","type":"exact"}],"termid":"SO:0001867"}


id: PBO:0049833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase like hydrolase domain containing 5","termid":"PBO:0049833"}


id: PR:O13827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19A8.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19A8.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.11c","synonyms":[{"name":"Spom972h-SPAC19A8.11c","type":"exact"}],"termid":"PR:O13827"}


id: MONDO:0008234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple endocrine neoplasia 2A (MEN2A) syndrome is a form of MEN2 characterized by medullary thyroid carcinoma (MTC) in combination with pheochromocytoma and primary mild hyperparathyroidism resulting from hyperplasia or adenoma of the parathyroid cells.","definition_xrefs":["Orphanet:247698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple endocrine neoplasia type 2","termid":"MONDO:0019003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0000426"],"is_obsolete":false,"name":"multiple endocrine neoplasia type 2A","secondary_identifiers":["MEDGEN:9958","MESH:D018813","UMLS:C0025268","ICD9:258.02","NANDO:2200406","SCTID:721188000","NCIT:C3226","OMIM:171400","NANDO:2201052","GARD:4881","DOID:0050430","icd11.foundation:1689268035"],"synonyms":[{"name":"MEA type 2a","type":"exact"},{"name":"MEA type II","type":"exact"},{"name":"MEN2A","type":"exact"},{"name":"Sipple syndrome","type":"exact"},{"name":"men 2A","type":"exact"},{"name":"men type 2a","type":"exact"},{"name":"men type II","type":"exact"},{"name":"men-2A syndrome","type":"related"},{"name":"multiple endocrine adenomatosis type 2A","type":"exact"},{"name":"multiple endocrine adenomatosis type 2a","type":"exact"},{"name":"multiple endocrine adenomatosis type II","type":"exact"},{"name":"multiple endocrine adenomatosis, type II","type":"exact"},{"name":"multiple endocrine neoplasia II","type":"exact"},{"name":"multiple endocrine neoplasia IIA","type":"exact"},{"name":"multiple endocrine neoplasia type 2A","type":"exact"},{"name":"multiple endocrine neoplasia type II","type":"exact"},{"name":"multiple endocrine neoplasia, type 2A","type":"related"},{"name":"multiple endocrine neoplasia, type II","type":"exact"},{"name":"multiple endocrine neoplasia, type IIA","type":"related"},{"name":"pheochromocytoma and amyloid producing medullary thyroid carcinoma","type":"related"},{"name":"pheochromocytoma and amyloid-producing medullary thyroid carcinoma","type":"related"},{"name":"ptc syndrome","type":"exact"},{"name":"thyroid carcinoma, familial medullary","type":"related"}],"termid":"MONDO:0008234","xrefs":{"Monarch":{"xref_id":"0008234"}}}


id: PR:Q9US03
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US03"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.10","synonyms":[{"name":"Spom972h-klp2","type":"exact"}],"termid":"PR:Q9US03"}


id: PBO:0034794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase Slh1, human ASCC3 ortholog (predicted)","termid":"PBO:0034794"}


id: PBO:0000120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA (predicted)","termid":"PBO:0000120"}


id: PBO:0028936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_polypeptone","termid":"PBO:0028936"}


id: SO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide sequence of a virus that infects bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phage_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Bacteriophage"],"synonyms":[{"name":"bacteriophage","type":"exact"},{"name":"phage","type":"exact"},{"name":"phage sequence","type":"exact"}],"termid":"SO:0001042"}


id: PBO:0059047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MN1 proto-oncogene, transcriptional regulator","termid":"PBO:0059047"}


id: MONDO:0008965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CHARGE syndrome is a multiple congenital anomaly syndrome characterized by the variable combination of multiple anomalies, mainly Coloboma; Choanal atresia/stenosis; Cranial nerve dysfunction; Characteristic ear anomalies (known as the major 4 C's).","definition_xrefs":["Orphanet:138"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"CHARGE syndrome","secondary_identifiers":["icd11.foundation:52086532","ICD9:759.89","UMLS:C0265354","MESH:D058747","SCTID:47535005","NCIT:C75100","GARD:29","MEDGEN:75567","NORD:920","OMIM:214800","NANDO:2200972","NANDO:1200464","MedDRA:10064063","DOID:0050834"],"synonyms":[{"name":"CHARGE association","type":"exact"},{"name":"CHARGE syndrome","type":"exact"},{"name":"Charge association--coloboma, heart anomaly, choanal atresia, retardation, genital and Ear anomalies","type":"related"},{"name":"Hall-Hittner syndrome","type":"exact"},{"name":"coloboma, heart anomaly, choanal atresia, retardation, genital and ear anomalies","type":"related"},{"name":"coloboma, heart defects, choanal atresia, retardation of Growth and development, genital abnormalities, and Ear anomalies association","type":"exact"},{"name":"coloboma, heart malformation, choanal atresia, retardation of Growth and development, genital abnormalities, and Ear malformations (CHARGE) association","type":"exact"},{"name":"coloboma-heart defects-atresia choanae-retardation of growth and development-genitourinary problems-ear abnormalities syndrome","type":"exact"}],"termid":"MONDO:0008965","xrefs":{"Monarch":{"xref_id":"0008965"}}}


id: PBO:0051062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3/OR15-3B (non-functional)","termid":"PBO:0051062"}


id: PBO:0054766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2178","termid":"PBO:0054766"}


id: MONDO:0018543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant hypocalcemia (AD hypocalcemia) is a disorder of calcium homeostasis characterized by variable degrees of hypocalcemia with abnormally low levels of parathyroid hormone (PTH) and persistent normal or elevated calciuria.","definition_xrefs":["Orphanet:428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"calcium metabolic disease","termid":"MONDO:0005557"},{"relation_name":"is_a","term_name":"familial hypoparathyroidism","termid":"MONDO:0016390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant hypocalcemia","secondary_identifiers":["GARD:2877","MEDGEN:884527","SCTID:711152006","UMLS:C4048195","OMIMPS:601198","DOID:0090109"],"synonyms":[{"name":"AD hypocalcemia","type":"exact"},{"name":"hypocalcemia","type":"broad"},{"name":"hypocalcemia, autosomal dominant","type":"exact"}],"termid":"MONDO:0018543","xrefs":{"Monarch":{"xref_id":"0018543"}}}


id: PBO:0031071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_stress_during_vegetative_growth","termid":"PBO:0031071"}


id: GO:0003878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + ADP + H+ + oxaloacetate + phosphate = ATP + citrate + CoA.","definition_xrefs":["RHEA:21160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"ATP citrate synthase activity","secondary_identifiers":["KEGG_REACTION:R00352","GO:0046913","MetaCyc:ATP-CITRATE-PRO-S--LYASE-RXN","Reactome:R-HSA-75848","EC:2.3.3.8"],"synonyms":[{"name":"ATP citrate (pro-S)-lyase activity","type":"related"},{"name":"ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"ATP-citrate (pro-S-)-lyase activity","type":"related"},{"name":"ATP-citric lyase activity","type":"related"},{"name":"ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"related"},{"name":"ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"related"},{"name":"acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"related"},{"name":"adenosine triphosphate citrate lyase activity","type":"related"},{"name":"citrate cleavage enzyme activity","type":"related"},{"name":"citrate-ATP lyase activity","type":"related"},{"name":"citric cleavage enzyme activity","type":"related"}],"termid":"GO:0003878"}


id: PR:Q6LA54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H5.08c gene.","definition_xrefs":["UniProtKB:Q6LA54","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C3H5.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.08c","synonyms":[{"name":"Spom972h-SPAC3H5.08c","type":"exact"}],"termid":"PR:Q6LA54"}


id: PBO:0049152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1A","termid":"PBO:0049152"}


id: MONDO:0032699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"idiopathic generalized epilepsy","termid":"MONDO:0005579"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 15","secondary_identifiers":["DOID:0111316","OMIM:618357","UMLS:C5193050","MEDGEN:1675524"],"synonyms":[{"name":"EIG15","type":"related"},{"name":"EPILEPSY, IDIOPATHIC GENERALIZED, SUSCEPTIBILITY TO, 15","type":"related"}],"termid":"MONDO:0032699","xrefs":{"Monarch":{"xref_id":"0032699"}}}


id: GO:1902617
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113484],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoride stimulus.","definition_xrefs":["GOC:kmv","GO_REF:0000071","PMID:8138152","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fluoride","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902617","terms_by_termid":{"GO:0140114":null}}


id: MONDO:0014803
data:
  {"annotated_genes":["SJAG_01417"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85573],"is_not":false,"summary":null,"term":"MONDO:0014803"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"},{"relation_name":"is_a","term_name":"inherited lipoic acid biosynthesis defect","termid":"MONDO:0018424"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"spasticity-ataxia-gait anomalies syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12681","MEDGEN:905660","Orphanet:401866","UMLS:C4225178","OMIM:616859"],"synonyms":[{"name":"SPAHGC","type":"exact"},{"name":"childhood-onset spasticity with hyperglycinemia","type":"related"},{"name":"childhood-onset spasticity with variant non-ketotic hyperglycinemia","type":"exact"},{"name":"spasticity, childhood-onset, with hyperglycinemia","type":"exact"}],"termid":"MONDO:0014803","terms_by_termid":{"MONDO:0014803":null},"xrefs":{"Monarch":{"xref_id":"0014803"}}}


id: GO:0071553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pyrimidine nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:sl","PMID:15796906","PMID:10736418","PMID:12369950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"nucleotide receptor activity","termid":"GO:0016502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled pyrimidinergic nucleotide receptor activity","synonyms":[{"name":"G protein coupled pyrimidinergic nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled pyrimidinergic nucleotide receptor activity","type":"exact"},{"name":"pyrimidinergic nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"pyrimidinergic nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0071553"}


id: PBO:0052269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4C","termid":"PBO:0052269"}


id: PBO:0028913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_cell_cycle_arrest_before_cell_separation","termid":"PBO:0028913"}


id: PBO:0070439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPH3AL antisense RNA 2","termid":"PBO:0070439"}


id: MONDO:0006112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multinodular intermediate fibroblastic neoplasm arising from the bladder. It is characterized by the presence of spindle-shaped fibroblasts and myofibroblasts, and a chronic inflammatory infiltrate composed of eosinophils, lymphocytes and plasma cells.","definition_xrefs":["NCIT:C6177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder neoplasm","termid":"MONDO:0004987"},{"relation_name":"is_a","term_name":"inflammatory myofibroblastic tumor","termid":"MONDO:0015798"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder inflammatory myofibroblastic tumor","secondary_identifiers":["EFO:1000127","ONCOTREE:IMTB","MEDGEN:237036","UMLS:C1336891"],"synonyms":[{"name":"bladder inflammatory myofibroblastic neoplasm","type":"exact"},{"name":"bladder inflammatory myofibroblastic tumor","type":"exact"},{"name":"inflammatory myofibroblastic bladder tumor","type":"related"},{"name":"inflammatory myofibroblastic bladder tumour","type":"related"},{"name":"inflammatory myofibroblastic neoplasm of bladder","type":"exact"},{"name":"inflammatory myofibroblastic neoplasm of the bladder","type":"exact"},{"name":"inflammatory myofibroblastic neoplasm of the urinary bladder","type":"exact"},{"name":"inflammatory myofibroblastic neoplasm of urinary bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumor of bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumor of the bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumor of the urinary bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumor of urinary bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumour of bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumour of the bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumour of the urinary bladder","type":"exact"},{"name":"inflammatory myofibroblastic tumour of urinary bladder","type":"exact"},{"name":"urinary bladder inflammatory myofibroblastic neoplasm","type":"exact"},{"name":"urinary bladder inflammatory myofibroblastic tumor","type":"exact"},{"name":"urinary bladder inflammatory myofibroblastic tumour","type":"exact"}],"termid":"MONDO:0006112","xrefs":{"Monarch":{"xref_id":"0006112"}}}


id: GO:0021631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the optic nerve is generated and organized. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"optic nerve development","termid":"GO:0021554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve morphogenesis","synonyms":[{"name":"CN II morphogenesis","type":"related"}],"termid":"GO:0021631"}


id: PBO:0056827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltase-glucoamylase","termid":"PBO:0056827"}


id: PR:Q09776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snu23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6.U5 small nuclear ribonucleoprotein component snu23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.11c","synonyms":[{"name":"Spom972h-snu23","type":"exact"}],"termid":"PR:Q09776"}


id: GO:0006177
data:
  {"annotated_genes":["SJAG_06634","SJAG_04634","SJAG_00964","SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59402,63110,74541],"is_not":false,"summary":null,"term":"GO:0006177"},{"annotations":[75238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"GMP metabolic process","termid":"GO:0046037"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_01298":null,"SJAG_04634":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"GMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000108":null},"synonyms":[{"name":"GMP anabolism","type":"exact"},{"name":"GMP biosynthesis","type":"exact"},{"name":"GMP formation","type":"exact"},{"name":"GMP synthesis","type":"exact"}],"termid":"GO:0006177","terms_by_termid":{"GO:0006177":null,"GO:0032263":null}}


id: PBO:0045513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 5","termid":"PBO:0045513"}


id: PBO:0054456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1853","termid":"PBO:0054456"}


id: PBO:0070129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 43 pseudogene","termid":"PBO:0070129"}


id: PBO:0064565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraoxonase 3","termid":"PBO:0064565"}


id: MONDO:0009109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lysinuric protein intolerance (LPI) is a very rare inherited multisystem condition caused by disturbance in amino acid metabolism.","definition_xrefs":["Orphanet:470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"lysinuric protein intolerance","secondary_identifiers":["MEDGEN:75704","SCTID:303852004","MESH:C562687","OMIM:222700","MedDRA:10058300","DOID:0060439","NANDO:2200488","UMLS:C0268647","GARD:3335","NANDO:1200809","icd11.foundation:972050440","NCIT:C121563","ICD9:270.8"],"synonyms":[{"name":"Dibasicamino aciduria II","type":"related"},{"name":"LPI","type":"exact"},{"name":"dibasic amino aciduria 2","type":"related"},{"name":"dibasic amino aciduria II","type":"exact"},{"name":"dibasic aminoaciduria 2","type":"related"},{"name":"hyperdibasic aminoaciduria","type":"exact"},{"name":"hyperdibasic aminoaciduria type 2","type":"exact"},{"name":"lysinuric PROTEIN intolerance","type":"related"},{"name":"lysinuric protein intolerance","type":"exact"}],"termid":"MONDO:0009109","xrefs":{"Monarch":{"xref_id":"0009109"}}}


id: GO:0102291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 11alpha-hydroxy-beta-amyrin + O2 + NADPH + H+ = 11-oxo-beta-amyrin + 2 H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 11alpha-hydroxy-beta-amyrin dehydrogenase activity (obsolete GO:0102291)","termid":"GO:0102291"}


id: PR:Q09146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hba1 gene.","definition_xrefs":["UniProtKB:Q09146","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A resistance protein Hba1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.13c","synonyms":[{"name":"SPBC365.13c","type":"related"},{"name":"Spom972h-hba1","type":"exact"},{"name":"caf1","type":"related"},{"name":"caffeine resistance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09146"}


id: GO:0031737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CX3C chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CX3C chemokine receptor binding","synonyms":[{"name":"CX3C chemokine receptor ligand","type":"narrow"},{"name":"fractalkine receptor binding","type":"exact"}],"termid":"GO:0031737"}


id: GO:1905864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Atg1/ULK1 kinase complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:autophagy","GOC:mf","GOC:TermGenie","PMID:26567215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"Atg1/ULK1 kinase complex assembly","termid":"GO:1904745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"regulation of ATG1 kinase complex formation","type":"exact"},{"name":"regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"regulation of Atg1p signalling complex formation","type":"exact"},{"name":"regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"regulation of ULK1 signaling complex formation","type":"exact"},{"name":"regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1905864"}


id: PATO:0000565
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000565 volume value (obsolete PATO:0000565)","termid":"PATO:0000565"}


id: GO:0004896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cytokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"cytokine receptor activity","secondary_identifiers":["GO:0004907"],"synonyms":[{"name":"IL receptor","type":"narrow"},{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor activity","type":"related"},{"name":"interleukin receptor activity","type":"narrow"}],"termid":"GO:0004896"}


id: MOD:00104
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to L-proline amide.","definition_xrefs":["PubMed:4982117","PubMed:5760861","RESID:AA0095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-proline amide","synonyms":[{"name":"(2S)-pyrrolidine-2-carboxamide","type":"exact"},{"name":"L-proline amide","type":"exact"},{"name":"MOD_RES Proline amide","type":"exact"},{"name":"ProN","type":"exact"},{"name":"amidated L-proline","type":"exact"},{"name":"prolinamide","type":"exact"}],"termid":"MOD:00104"}


id: GO:0042719
data:
  {"annotated_genes":["SJAG_02524","SJAG_01949","SJAG_00687","SJAG_04208"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88416,90152,92551,116008],"is_not":false,"summary":null,"term":"GO:0042719"}]},"cv_name":"cellular_component","definition":"Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane.","definition_xrefs":["PMID:12581629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"},{"relation_name":"part_of","term_name":"mitochondrial intermembrane space","termid":"GO:0005758"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00687":null,"SJAG_01949":null,"SJAG_02524":null,"SJAG_04208":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial intermembrane space protein transporter complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Tim9-Tim10 complex","type":"narrow"}],"termid":"GO:0042719","terms_by_termid":{"GO:0042719":null}}


id: MOD:01598
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-117 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01598"}


id: PBO:0005079
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.-.-","termid":"PBO:0005079"}


id: PBO:0073156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit alpha 2","termid":"PBO:0073156"}


id: MONDO:0003543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the trigeminal nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal nerve disorder","secondary_identifiers":["EFO:0009569","ICD9:350.8","DOID:561","MESH:D020433","MEDGEN:101823","NCIT:C26952","UMLS:C0152177","SCTID:64309007"],"synonyms":[{"name":"disease of trigeminal nerve","type":"exact"},{"name":"disease or disorder of trigeminal nerve","type":"exact"},{"name":"disorder of the fifth cranial nerve","type":"related"},{"name":"disorder of trigeminal nerve","type":"exact"},{"name":"disorders of the fifth nerve","type":"related"},{"name":"disorders of the vth cranial nerve","type":"related"},{"name":"trigeminal nerve disease","type":"exact"},{"name":"trigeminal nerve disease or disorder","type":"exact"},{"name":"trigeminal nerve disorder","type":"exact"}],"termid":"MONDO:0003543","xrefs":{"Monarch":{"xref_id":"0003543"}}}


id: MONDO:0007259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniofaciofrontodigital is a rare multiple congenital anomalies syndrome characterized by mild intellectual disability, short stature, cardiac anomalies, mild dysmorphic features (macrocephaly, prominent forehead, hypertelorism, exophthalmos), cutis laxa, joint hyperlaxity, wrinkled palms and soles and skeletal anomalies (sella turcica, wide ribs and small vertebral bodies).","definition_xrefs":["Orphanet:363705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"craniofaciofrontodigital syndrome","secondary_identifiers":["MEDGEN:393947","MESH:C567298","SCTID:763320005","GARD:17571","OMIM:114620","UMLS:C2676032"],"synonyms":[{"name":"Cantu craniofaciofrontodigital syndrome","type":"exact"},{"name":"craniofaciofrontodigital syndrome","type":"exact"}],"termid":"MONDO:0007259","xrefs":{"Monarch":{"xref_id":"0007259"}}}


id: GO:0140366
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-stoichiometric protein complex formed by several galectins crosslinking glycosylated ligands to form a dynamic lattice. The galectin lattice modulates receptor kinase signaling and the functionality of membrane receptors, by regulating the diffusion, compartmentalization and endocytosis of plasma membrane glycoproteins and glycolipids.","definition_xrefs":["PMID:30951647","PMID:19021578","PMID:28893908","PMID:26092931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-cell adhesion","termid":"GO:0098635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"galectin lattice","termid":"GO:0140366"}


id: PBO:0053542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 547","termid":"PBO:0053542"}


id: FYPO:0006685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during mating in which the localization of a protein produced by one cell to the nucleus of its mating partner (i.e. of the opposite mating type) does not occur. Such protein localization normally occurs after cell fusion but prior to karyogamy.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to mating partner nucleus in zygote","synonyms":[{"name":"abolished protein localisation to conjugation partner nucleus in zygote","type":"exact"},{"name":"abolished protein localisation to mating partner nucleus in zygote","type":"exact"},{"name":"abolished protein localization to nucleus of opposite mating type cell","type":"exact"},{"name":"abolished protein localization to partner nucleus during mating","type":"exact"},{"name":"nuclear exclusion from mating partner nucleus in zygote","type":"related"},{"name":"protein localization to mating partner nucleus abolished in zygote","type":"exact"}],"termid":"FYPO:0006685"}


id: PATO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A peramorphic growth quality which is due to an increased rate.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peramorphic growth","termid":"PATO:0001752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accelerated growth","termid":"PATO:0001753"}


id: PBO:0069123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 373, pseudogene","termid":"PBO:0069123"}


id: MONDO:0044983
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A benign mesenchymal neoplasm composed of adipose (fatty) tissue. The most common representative of this category is the lipoma.","definition_xrefs":["NCIT:C4502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"tumor of adipose tissue","termid":"MONDO:0021354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"benign lipomatous neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:226447034","UMLS:C0346118","MEDGEN:91084"],"synonyms":[{"name":"adipose tissue benign connective and soft tissue neoplasm","type":"exact"},{"name":"benign adipose tissue neoplasm","type":"exact"},{"name":"benign adipose tissue tumor","type":"exact"},{"name":"benign adipose tissue tumour","type":"exact"},{"name":"benign connective and soft tissue neoplasm of adipose tissue","type":"exact"},{"name":"benign lipomatous neoplasm","type":"exact"},{"name":"benign lipomatous tumor","type":"exact"},{"name":"benign lipomatous tumour","type":"exact"},{"name":"benign neoplasm of adipose tissue","type":"exact"},{"name":"benign neoplasm of the adipose tissue","type":"exact"},{"name":"benign tumor of adipose tissue","type":"related"},{"name":"benign tumor of the adipose tissue","type":"exact"},{"name":"benign tumour of adipose tissue","type":"related"},{"name":"benign tumour of the adipose tissue","type":"exact"}],"termid":"MONDO:0044983","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0044983"}}}


id: GO:0047657
data:
  {"annotated_genes":["SJAG_04236","SJAG_04184","SJAG_01028","SJAG_03057","SJAG_02916"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70324,71273,73029,73167,78463],"is_not":false,"summary":null,"term":"GO:0047657"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + [alpha-D-glucosyl-(1,3)]n = UDP + [alpha-D-glucosyl-(1,3)]n+1.","definition_xrefs":["EC:2.4.1.183","MetaCyc:ALPHA-13-GLUCAN-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01028":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"alpha-1,3-glucan synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:19749"],"synonyms":[{"name":"1,3-alpha-D-glucan synthase activity","type":"related"},{"name":"1,3-alpha-glucan synthase activity","type":"exact"},{"name":"UDP-glucose:alpha-D-(1->3)-glucan 3-alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:alpha-D-(1->3)-glucan 3-alpha-D-glucosyltransferase activity","type":"related"},{"name":"a-1,3-glucan synthase activity","type":"exact"},{"name":"uridine diphosphoglucose-1,3-alpha-glucan glucosyltransferase activity","type":"related"}],"termid":"GO:0047657","terms_by_termid":{"GO:0047657":null}}


id: GO:0005276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a vesicle membrane to the other according to the reaction: H+(in) + amino acid(out) = H+(out) + amino acid(in).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular amino acid:proton antiporter activity (obsolete GO:0005276)","synonyms":[{"name":"hydrogen:vesicular amine antiporter activity","type":"exact"},{"name":"vesicular hydrogen:amino acid antiporter activity","type":"exact"}],"termid":"GO:0005276"}


id: PBO:0042046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 102B","termid":"PBO:0042046"}


id: GO:0006619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The targeting of proteins to a membrane that occurs during translation and is independent of SRP and signal recognition.","definition_xrefs":["GOC:ai","PMID:11101515"],"gene_count":0,"genotype_count":0,"name":"obsolete SRP-independent cotranslational protein-membrane targeting (obsolete GO:0006619)","synonyms":[{"name":"ER translocation","type":"broad"},{"name":"SRP-independent cotranslational membrane targeting","type":"exact"},{"name":"SRP-independent cotranslational protein-membrane targeting","type":"exact"}],"termid":"GO:0006619"}


id: GO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way, Once recruited to an RNA polymerase III promoter by one or more other transcription factors, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIIB-type transcription factor activity (obsolete GO:0001026)","synonyms":[{"name":"RNA polymerase III recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001026"}


id: FYPO:0000154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the G0 to G1 transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal negative regulation of G0 to G1 transition","synonyms":[{"name":"abnormal maintenance of cell quiescence","type":"exact"},{"name":"abnormal maintenance of G0 arrest","type":"exact"},{"name":"abnormal maintenance of G0 phase","type":"exact"},{"name":"abnormal maintenance of cell cycle quiescence","type":"exact"}],"termid":"FYPO:0000154"}


id: PBO:0067510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 650, pseudogene","termid":"PBO:0067510"}


id: GO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to negative selection of B cells in the periphery.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral B cell selection","termid":"GO:0002343"},{"relation_name":"is_a","term_name":"B cell negative selection","termid":"GO:0002352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral B cell negative selection","synonyms":[{"name":"peripheral B lymphocyte negative selection","type":"exact"},{"name":"peripheral B-cell negative selection","type":"exact"},{"name":"peripheral B-lymphocyte negative selection","type":"exact"}],"termid":"GO:0002356"}


id: GO:0035988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["PMID:21484705","GOC:yaf","CL:0000138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte proliferation","synonyms":[{"name":"cartilage cell proliferation","type":"exact"},{"name":"chondrocyte cell proliferation","type":"exact"}],"termid":"GO:0035988"}


id: CHEBI:23414
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A metal sulfate compound having copper(2+) as the counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(2+) sulfate","termid":"CHEBI:23414"}


id: PBO:0028441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_galactose_level_in_glycoprotein_glycan","termid":"PBO:0028441"}


id: GO:0052103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of induced systemic resistance in the host organism; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","PMID:31516360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host induced systemic resistance","termid":"GO:0052159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host induced systemic resistance","secondary_identifiers":["GO:0052288","GO:0052532","GO:0052533"],"synonyms":[{"name":"activation by organism of ISR in host","type":"exact"},{"name":"activation by organism of induced systemic resistance in host","type":"exact"},{"name":"activation by symbiont of induced systemic resistance in host","type":"narrow"},{"name":"induction by organism of ISR in host","type":"exact"},{"name":"induction by organism of induced systemic resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of host induced systemic resistance","type":"exact"},{"name":"induction by symbiont of induced systemic resistance in host","type":"exact"},{"name":"induction of host induced systemic resistance","type":"exact"},{"name":"positive regulation by organism of induced systemic resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host induced systemic resistance","type":"related"},{"name":"positive regulation by symbiont of induced systemic resistance in host","type":"related"},{"name":"stimulation by symbiont of induced systemic resistance in host","type":"narrow"},{"name":"up regulation by symbiont of induced systemic resistance in host","type":"related"},{"name":"up-regulation by symbiont of induced systemic resistance in host","type":"related"},{"name":"upregulation by symbiont of induced systemic resistance in host","type":"related"}],"termid":"GO:0052103"}


id: PBO:0027684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_curved,_elongated_cell","termid":"PBO:0027684"}


id: RO:HOM0000009
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homoplasy that involves phenotypes similar to those seen in ancestors within the lineage.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homoplasy_relationship_with","termid":"RO:HOM0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_reversal_relationship_with","synonyms":[{"name":"atavism","type":"exact"},{"name":"reversion","type":"related"},{"name":"rudiment","type":"exact"}],"termid":"RO:HOM0000009"}


id: GO:1901791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["UniPathway:UPA00836","MetaCyc:HCAMHPDEG-PWY","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","termid":"GO:1901790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate catabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate breakdown","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate catabolism","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate degradation","type":"exact"}],"termid":"GO:1901791"}


id: MONDO:0014791
data:
  {"annotated_genes":["SJAG_02873"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85560],"is_not":false,"summary":null,"term":"MONDO:0014791"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02873":null},"genotype_count":0,"is_obsolete":false,"name":"Luscan-Lumish syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616831","GARD:13789","MEDGEN:898669","UMLS:C4085873","Orphanet:597738"],"synonyms":[{"name":"LLS","type":"exact"},{"name":"LLs","type":"exact"},{"name":"Luscan-Lumish syndrome","type":"exact"},{"name":"Luscan-Lumish syndrome; LLs","type":"exact"},{"name":"SETD2-related overgrowth syndrome","type":"exact"}],"termid":"MONDO:0014791","terms_by_termid":{"MONDO:0014791":null},"xrefs":{"Monarch":{"xref_id":"0014791"}}}


id: SO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The untranslated sequence separating the 'cistrons' of multicistronic mRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"untranslated_region_polycistronic_mRNA","synonyms":[{"name":"untranslated region polycistronic mRNA","type":"exact"}],"termid":"SO:0000242"}


id: PBO:0082960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; APCC(Cdh1) substrate; potentially phosphorylated by Cdc28p; YBR138C is not an essential gene","termid":"PBO:0082960"}


id: MOD:01604
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 4x(15)N labeled L-arginine.","definition_xrefs":["PubMed:18688235","URL:http://www.sigmaaldrich.com/catalog/ProductDetail.do?N4=600113|ALDRICH&N5=SEARCH_CONCAT_PNO|BRAND_KEY&F=SPEC&lang=en_US0.000000E+000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(15)N labeled L-arginine","termid":"MOD:01604"}


id: GO:0071050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues at the 3' end of snoRNA class molecule (referred to as an sRNA in Archaea). In eukaryotes, this occurs in conjunction with termination of transcription of precursor snoRNA molecules and may occur post-transcriptionally on incorrectly processed molecules targeted for degradation.","definition_xrefs":["GOC:krc","GOC:dgf","PMID:18951092"],"gene_count":0,"genotype_count":0,"name":"obsolete sno(s)RNA polyadenylation (obsolete GO:0071050)","synonyms":[{"name":"sRNA polyadenylation","type":"narrow"},{"name":"snoRNA polyadenylation","type":"narrow"}],"termid":"GO:0071050"}


id: MONDO:0023820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Moebius axonal neuropathy hypogonadism (obsolete MONDO:0023820)","termid":"MONDO:0023820","xrefs":{"Monarch":{"xref_id":"0023820"}}}


id: MONDO:0044777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 14","secondary_identifiers":["UMLS:C4693941","GTR:AN1172965","MEDGEN:1646133","OMIM:618014","DOID:0080871"],"synonyms":[{"name":"GDF9-related primary ovarian insufficiency","type":"related"},{"name":"POF14","type":"related"},{"name":"premature ovarian failure 14","type":"exact"}],"termid":"MONDO:0044777","xrefs":{"Monarch":{"xref_id":"0044777"}}}


id: PBO:0067024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 37, pseudogene","termid":"PBO:0067024"}


id: PBO:0048638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 8","termid":"PBO:0048638"}


id: PBO:0041887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated auxiliary subunit beta","termid":"PBO:0041887"}


id: GO:1905048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["PMID:26473732","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metallopeptidase activity","synonyms":[{"name":"regulation of metalloprotease activity","type":"narrow"},{"name":"regulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905048"}


id: PBO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pab2 associates with polyadenylated snoRNAs near the polyadenylation site","termid":"PBO:0017010"}


id: GO:0098873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Propagation of an action potential in a neuron, from its site of initiation (typically the axon hillock) towards the soma.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential propagation","termid":"GO:0098870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential back-propagation","termid":"GO:0098873"}


id: GO:0021764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the amygdala over time from its initial formation until its mature state. The amygdala is an almond-shaped set of neurons in the medial temporal lobe of the brain that play a key role in processing emotions such as fear and pleasure.","definition_xrefs":["GO_REF:0000021","GOC:dph","ISBN:0878937420","GOC:cls","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amygdala development","termid":"GO:0021764"}


id: PBO:0058330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4704","termid":"PBO:0058330"}


id: MONDO:0006424
data:
  {"annotated_genes":["SJAG_00991","SJAG_04755","SJAG_04213","SJAG_05313","SJAG_03689","SJAG_00289","SJAG_05346","SJAG_01111","SJAG_00490"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[86704,86705,86703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"},{"annotations":[84958,84959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[87097,87096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[86710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm that arises from the soft tissue. The most common types are lipomatous (fatty), vascular, smooth muscle, fibrous, and fibrohistiocytic neoplasms.","definition_xrefs":["NCIT:C3377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective and soft tissue neoplasm","termid":"MONDO:0044334"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00490":null,"SJAG_00991":null,"SJAG_01111":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"soft tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:SOFTTISSUE","EFO:1000541","SCTID:387837005","UMLS:C0037579","MEDGEN:11495"],"synonyms":[{"name":"SOFTTISSUE","type":"related"},{"name":"neoplasm of soft tissue","type":"exact"},{"name":"neoplasm of the soft tissue","type":"exact"},{"name":"soft tissue neoplasm","type":"exact"},{"name":"soft tissue tumor","type":"exact"},{"name":"soft tissue tumors","type":"exact"},{"name":"soft tissue tumour","type":"exact"},{"name":"soft tissue tumours","type":"exact"},{"name":"tumor of soft tissue","type":"exact"},{"name":"tumor of the soft tissue","type":"exact"},{"name":"tumour of soft tissue","type":"exact"},{"name":"tumour of the soft tissue","type":"exact"}],"termid":"MONDO:0006424","terms_by_termid":{"MONDO:0011655":null,"MONDO:0011705":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0006424"}}}


id: GO:0071375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptide hormone stimulus","synonyms":[{"name":"cellular response to polypeptide hormone stimulus","type":"exact"}],"termid":"GO:0071375"}


id: MONDO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The cutaneous and occasional systemic reactions associated with vaccination using smallpox (variola) vaccine.","definition_xrefs":["MESH:D014615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaccinia","secondary_identifiers":["SCTID:111852003","DOID:3298","ICD9:999.0","MEDGEN:52964","UMLS:C0042214","icd11.foundation:1275065853"],"termid":"MONDO:0002595","xrefs":{"Monarch":{"xref_id":"0002595"}}}


id: GO:0007565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth.","definition_xrefs":["ISBN:0192800825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-organism reproductive process","termid":"GO:0044703"},{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female pregnancy","secondary_identifiers":["Wikipedia:Gestation"],"synonyms":[{"name":"carrying of young","type":"related"},{"name":"gestation","type":"exact"}],"termid":"GO:0007565"}


id: MONDO:0022615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"burn goodship syndrome","termid":"MONDO:0022615","xrefs":{"Monarch":{"xref_id":"0022615"}}}


id: PBO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar carboxypeptidase (predicted)","termid":"PBO:0001860"}


id: GO:0044706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A multicellular organism process which involves another multicellular organism of the same or different species.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-multicellular organism process","termid":"GO:0044706"}


id: MONDO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of a rapid grossly irregular ventricular rhythm with marked variability in QRS cycle length, morphology, and amplitude. The rate is typically greater than 300 bpm. (CDISC)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"ventricular fibrillation","secondary_identifiers":["icd11.foundation:1662472992","NANDO:2100052","NCIT:C50799","HP:0001663","MEDGEN:21844","ICD9:427.41","UMLS:C0042510","EFO:0004287","MESH:D014693","NANDO:2200227","SCTID:71908006"],"synonyms":[{"name":"VF","type":"exact"},{"name":"VFib","type":"exact"},{"name":"fibrillation, ventricular","type":"exact"},{"name":"ventricular fibrillation","type":"exact"},{"name":"ventricular fibrillation (disease)","type":"exact"}],"termid":"MONDO:0000190","xrefs":{"Monarch":{"xref_id":"0000190"}}}


id: PBO:0065603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTOV1 antisense RNA 1","termid":"PBO:0065603"}


id: PBO:0011497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillarin, rRNA methyltransferase","termid":"PBO:0011497"}


id: PBO:0062473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily G member 1","termid":"PBO:0062473"}


id: GO:0030273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the cyclic peptide hormone melanin-concentrating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"melanin-concentrating hormone receptor activity","synonyms":[{"name":"MCH receptor","type":"exact"}],"termid":"GO:0030273"}


id: PBO:0087902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; required for flocculation, diploid filamentous growth, and haploid invasive growth; forms a heterodimer with Mss11p that interacts with the Swi/Snf complex during transcriptional activation of FLO1, FLO11, and STA1; S. cerevisiae genome reference strain S288C contains an internal in-frame stop at codon 142, which in other strains encodes tryptophan","termid":"PBO:0087902"}


id: PBO:0061941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily Q member 1","termid":"PBO:0061941"}


id: PBO:0040140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 3","termid":"PBO:0040140"}


id: PBO:0041402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 62","termid":"PBO:0041402"}


id: PBO:0108897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 10","termid":"PBO:0108897"}


id: MONDO:0044753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spinal stenosis that involves the lumbar region of vertebral column.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal stenosis","termid":"MONDO:0005965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar spinal stenosis","secondary_identifiers":["MEDGEN:488791","NCIT:C177445","HP:0004610","SCTID:18347007","ICD9:724.02","UMLS:C0158288"],"synonyms":[{"name":"lumbar region of vertebral column spinal stenosis","type":"exact"},{"name":"lumbar spinal stenosis","type":"exact"},{"name":"spinal stenosis of lumbar region","type":"exact"},{"name":"spinal stenosis of lumbar region of vertebral column","type":"exact"}],"termid":"MONDO:0044753","xrefs":{"Monarch":{"xref_id":"0044753"}}}


id: PBO:0003622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RINT1 family protein (predicted)","termid":"PBO:0003622"}


id: PBO:0072367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 53","termid":"PBO:0072367"}


id: GO:0009648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a period of light or dark of a given length, measured relative to a particular duration known as the 'critical day length'. The critical day length varies between species.","definition_xrefs":["ISBN:0582015952","ISBN:0697037754","GOC:jid","GOC:pj","ISBN:0709408862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoperiodism","secondary_identifiers":["Wikipedia:Photoperiodism"],"synonyms":[{"name":"response to day length","type":"exact"},{"name":"response to night length","type":"exact"},{"name":"response to photoperiod","type":"exact"}],"termid":"GO:0009648"}


id: GO:2000447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage migration inhibitory factor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of macrophage migration inhibitory factor signaling pathway","termid":"GO:2000446"},{"relation_name":"negatively_regulates","term_name":"macrophage migration inhibitory factor signaling pathway","termid":"GO:0035691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"negative regulation of MIF signaling pathway","type":"exact"},{"name":"negative regulation of macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:2000447"}


id: FYPO:0004357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitosis","secondary_identifiers":["FYPO:0002832"],"synonyms":[{"name":"decreased protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during mitotic M phase","type":"related"},{"name":"decreased protein phosphorylation during mitotic M-phase","type":"related"},{"name":"decreased protein phosphorylation during mitotic nuclear division","type":"exact"},{"name":"decreased protein/peptide phosphorylation during mitosis","type":"exact"},{"name":"reduced protein phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0004357"}


id: GO:0032085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a type II restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of type II site-specific deoxyribonuclease activity (obsolete GO:0032085)","synonyms":[{"name":"regulation of type II restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type II restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type II restriction enzyme regulator","type":"related"}],"termid":"GO:0032085"}


id: MONDO:0800113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of vasculitis that is comprised of vasculitides that present with necrosis.","definition_xrefs":["PMID:637044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing vasculitis","secondary_identifiers":["MEDGEN:230813","NCIT:C70635","UMLS:C1318520"],"synonyms":[{"name":"systemic vasculitis","type":"exact"}],"termid":"MONDO:0800113","xrefs":{"Monarch":{"xref_id":"0800113"}}}


id: GO:0030969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The spliceosome-independent cleavage and ligation of the mRNA encoding a UFP-specific transcription factor to remove a single intron, thereby increasing both the translational efficiency of the processed mRNA and the activity of the protein it encodes.","definition_xrefs":["PMID:21924241","GOC:mah","PMID:12042763"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA splicing via endonucleolytic cleavage and ligation involved in unfolded protein response (obsolete GO:0030969)","synonyms":[{"name":"HAC1 mRNA splicing","type":"narrow"},{"name":"IRE1-mediated XBP-1 mRNA splicing","type":"narrow"},{"name":"Ire1p-mediated HAC-1 mRNA splicing","type":"narrow"},{"name":"UFP-specific transcription factor mRNA processing during unfolded protein response","type":"related"},{"name":"UFP-specific transcription factor mRNA processing involved in ER UPR","type":"exact"},{"name":"UFP-specific transcription factor mRNA processing involved in ER unfolded protein response","type":"exact"},{"name":"UFP-specific transcription factor mRNA processing involved in endoplasmic reticulum UPR","type":"exact"},{"name":"UFP-specific transcription factor mRNA processing involved in endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"XBP1 mRNA splicing","type":"exact"},{"name":"XBP1 mRNA splicing under conditions of endoplasmic reticulum (ER) stress","type":"narrow"},{"name":"XBP1 mRNA splicing, via endonucleolytic cleavage and ligation","type":"exact"},{"name":"non-spliceosomal mRNA splicing in the unfolded protein response pathway","type":"exact"},{"name":"spliceosome-independent UFP-specific transcription factor mRNA processing","type":"exact"},{"name":"unconventional mRNA splicing involved in UPR","type":"exact"},{"name":"unconventional splicing of XBP1 mRNA","type":"exact"},{"name":"unfolded protein response, cleavage of primary transcript encoding UFP-specific transcription factor","type":"related"},{"name":"unfolded protein response, ligation of mRNA encoding UFP-specific transcription factor by RNA ligase","type":"related"}],"termid":"GO:0030969"}


id: SO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A codon variant that changes at least one base of the canonical start codon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiator_codon_variant","termid":"SO:0001582"},{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_lost","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:start_lost","type":"exact"},{"name":"VEP:start_lost","type":"exact"},{"name":"snpEff:START_LOST","type":"exact"}],"termid":"SO:0002012"}


id: GO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the dorsal filaments, elaborate specializations of the chorion that protrude from the anterior end of the egg and facilitate embryonic respiration.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"dorsal appendage formation","termid":"GO:0046843"}


id: MONDO:0021138
data:
  {"annotated_genes":["SJAG_01013","SJAG_05979","SJAG_03905","SJAG_03453","SJAG_01748","SJAG_01349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86977,87132,86979,86978,87131,86976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"}]},"cv_name":"mondo","definition":"Malignant neoplasms that either originate from the bone marrow (e.g. myeloid leukemias) or involve the bone marrow as secondary-metastatic tumors (e.g. metastatic carcinomas to the bone marrow). --2003","definition_xrefs":["NCIT:C35501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"bone marrow neoplasm","termid":"MONDO:0005374"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"bone marrow cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2703042","MEDGEN:438070"],"synonyms":[{"name":"bone marrow cancer","type":"exact"},{"name":"cancer of bone marrow","type":"exact"},{"name":"malignant bone marrow neoplasm","type":"exact"},{"name":"malignant bone marrow tumor","type":"exact"},{"name":"malignant bone marrow tumour","type":"exact"},{"name":"malignant neoplasm of bone marrow","type":"exact"}],"termid":"MONDO:0021138","terms_by_termid":{"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0021138"}}}


id: PR:Q10223
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.01","synonyms":[{"name":"Spom972h-pof14","type":"exact"}],"termid":"PR:Q10223"}


id: MONDO:0024621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant serous cystic neoplasm usually involving the ovary or the pancreas. It is characterized by the presence of invasive malignant glandular epithelial cells which often form papillary structures.","definition_xrefs":["NCIT:C3778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"serous cystadenocarcinoma","secondary_identifiers":["UMLS:C0206701","ICDO:8441/3","MEDGEN:60212"],"synonyms":[{"name":"serous adenocarcinoma","type":"broad"},{"name":"serous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0024621","xrefs":{"Monarch":{"xref_id":"0024621"}}}


id: PBO:0047912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(9)(q22.1)","termid":"PBO:0047912"}


id: GO:0080173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial contact step made between the male gamete and the female gamete during double fertilization forming a zygote and endosperm. An example can be found in Arabidopsis thaliana.","definition_xrefs":["PMID:21123745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm","termid":"GO:0061936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"male-female gamete recognition during double fertilization forming a zygote and endosperm","synonyms":[{"name":"gamete recognition","type":"broad"},{"name":"male-female gamete recognition","type":"exact"}],"termid":"GO:0080173"}


id: MONDO:0041850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia caused by gram negative bacteria","secondary_identifiers":["UMLS:C0854248","SCTID:430395005","MEDGEN:678525"],"synonyms":[{"name":"gram negative pneumonia","type":"related"},{"name":"gramme negative pneumonia","type":"related"},{"name":"pneumonia caused by gram negative bacteria","type":"exact"},{"name":"pneumonia caused by gram-negative bacteria","type":"related"},{"name":"pneumonia due to gram negative bacteria","type":"exact"},{"name":"pneumonia due to gram-negative bacteria","type":"related"},{"name":"pneumonia due to gramme negative bacteria","type":"exact"}],"termid":"MONDO:0041850","xrefs":{"Monarch":{"xref_id":"0041850"}}}


id: MONDO:1010483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, domestic cat","secondary_identifiers":["OMIA:000994-9685"],"termid":"MONDO:1010483","xrefs":{"Monarch":{"xref_id":"1010483"}}}


id: GO:0014061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of norepinephrine secretion","synonyms":[{"name":"regulation of noradrenaline secretion","type":"exact"}],"termid":"GO:0014061"}


id: FYPO:0007532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which arrested replication forks do not colocalize with nuclear pore complexes (NPCs) longer than actively replicating forks. Normally, arrested replication forks relocate to NPCs as part of replication fork processing, and remain anchored at NPCs while recombination-dependent replication takes place.","definition_xrefs":["PomBase:mah","PMID:33159083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased replication fork colocalization with nuclear pore complex","synonyms":[{"name":"decreased replication fork colocalization with NPC","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore complex during mitotic S phase","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore complex during mitotic cell cycle","type":"related"},{"name":"decreased replication fork colocalization with nuclear pore complex during vegetative growth","type":"exact"},{"name":"decreased replication fork relocation to nuclear pore complex","type":"exact"},{"name":"decreased replication fork relocation to nuclear pore complex during mitotic S phase","type":"exact"},{"name":"reduced replication fork colocalization with nuclear pore complex","type":"exact"}],"termid":"FYPO:0007532"}


id: PR:G2TRS1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.20","synonyms":[{"name":"Spom972h-new14","type":"exact"}],"termid":"PR:G2TRS1"}


id: GO:0005795
data:
  {"annotated_genes":["SJAG_04770","SJAG_04548","SJAG_03555","SJAG_04095","SJAG_03347","SJAG_04739","SJAG_00330","SJAG_01025","SJAG_01276","SJAG_00567","SJAG_03278","SJAG_04112","SJAG_00816","SJAG_01516","SJAG_01633","SJAG_03634","SJAG_02902"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62020,69855,70200,110597],"is_not":false,"summary":null,"term":"GO:0005795"},{"annotations":[75444,95807],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000137"},{"annotations":[77230],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031985"},{"annotations":[76250,78317,97846,71088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005797"},{"annotations":[78316,76249,95808,71087,99268],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000138"},{"annotations":[69731],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[104710,87265,117790,97640],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00330":null,"SJAG_00567":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01516":null,"SJAG_01633":null,"SJAG_02902":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04548":null,"SJAG_04739":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"Golgi stack","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016940"],"synonyms":[{"name":"Golgi cisternae","type":"exact"},{"name":"dictyosome","type":"narrow"}],"termid":"GO:0005795","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005795":null,"GO:0005797":null,"GO:0031985":null,"GO:0140497":null}}


id: PBO:0116416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type proton exporting ATPase, P3-type Pma2","termid":"PBO:0116416"}


id: PBO:0071633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL36A pseudogene 52","termid":"PBO:0071633"}


id: GO:0034766
data:
  {"annotated_genes":["SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90981,113107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transmembrane ion transport","type":"exact"},{"name":"down-regulation of transmembrane ion transport","type":"exact"},{"name":"downregulation of transmembrane ion transport","type":"exact"},{"name":"inhibition of transmembrane ion transport","type":"narrow"},{"name":"negative regulation of ion membrane transport","type":"exact"},{"name":"negative regulation of ion transmembrane transport","type":"broad"},{"name":"negative regulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034766","terms_by_termid":{"GO:1905949":null}}


id: PBO:0054775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2188","termid":"PBO:0054775"}


id: FYPO:0000972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PMID:22064477","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"},{"relation_name":"is_a","term_name":"increased number of Rad52 foci","termid":"FYPO:0004709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Rad52 foci during vegetative growth","synonyms":[{"name":"increased number of Rad22 foci during vegetative growth","type":"exact"},{"name":"increased number of Rad52 foci during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000972"}


id: PBO:0082167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adhesion subunit of a-agglutinin of a-cells; C-terminal sequence acts as a ligand for alpha-agglutinin (Sag1p) during agglutination, modified with O-linked oligomannosyl chains, linked to anchorage subunit Aga1p via two disulfide bonds","termid":"PBO:0082167"}


id: MONDO:0054850
data:
  {"annotated_genes":["SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86169],"is_not":false,"summary":null,"term":"MONDO:0054850"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080498","OMIM:618078","GARD:18042","MEDGEN:1648307","UMLS:C4748084"],"synonyms":[{"name":"ODG6","type":"related"},{"name":"ovarian dysgenesis 6","type":"exact"}],"termid":"MONDO:0054850","terms_by_termid":{"MONDO:0054850":null},"xrefs":{"Monarch":{"xref_id":"0054850"}}}


id: GO:0016266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form a core O-glycan structure.","definition_xrefs":["GOC:mah","GOC:pr","PMID:10580130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"O-glycan processing","secondary_identifiers":["Reactome:R-HSA-913709"],"termid":"GO:0016266"}


id: MONDO:0018610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset partial cataract","termid":"MONDO:0020377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset posterior subcapsular cataract","secondary_identifiers":["Orphanet:441447","GARD:21846","MEDGEN:1842187","UMLS:C5681190"],"termid":"MONDO:0018610","xrefs":{"Monarch":{"xref_id":"0018610"}}}


id: GO:0006601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of creatine, N-[amino(imino)methyl]-N-methylglycine. Creatine is formed by a process beginning with amidino group transfer from L-arginine to glycine to form guanidinoacetate, followed by methyl group transfer from S-adenosyl-L-methionine to guanidinoacetate; it is then is phosphorylated to form a pool that stores high energy phosphate for the replenishment of ATP during periods of high, or fluctuating energy demand. In animals, most creatine is transported to and used in muscle.","definition_xrefs":["GOC:mah","MetaCyc:GLYCGREAT-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine metabolic process","termid":"GO:0006600"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"creatine biosynthetic process","synonyms":[{"name":"creatine anabolism","type":"exact"},{"name":"creatine biosynthesis","type":"exact"},{"name":"creatine formation","type":"exact"},{"name":"creatine synthesis","type":"exact"}],"termid":"GO:0006601"}


id: MONDO:0002039
data:
  {"annotated_genes":["SJAG_00421","SJAG_01356","SJAG_02518","SJAG_01466","SJAG_03692","SJAG_05332","SJAG_03345","SJAG_02119","SJAG_02885","SJAG_00526","SJAG_00115","SJAG_03052","SJAG_01438","SJAG_00686","SJAG_03712","SJAG_02716","SJAG_16459","SJAG_03866","SJAG_04757","SJAG_00233","SJAG_01229","SJAG_02084","SJAG_00087","SJAG_02377","SJAG_04489","SJAG_01317","SJAG_01179","SJAG_05277","SJAG_02196"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[86567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[85006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014628"},{"annotations":[85942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[86206,86205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[85230,85231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008695"},{"annotations":[86515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[85097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[85704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[86493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008178"},{"annotations":[86706,86707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"},{"annotations":[86692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010476"},{"annotations":[85408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014290"},{"annotations":[86875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958231"},{"annotations":[85616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"},{"annotations":[87112,87111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005090"},{"annotations":[85768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[85455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[85019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[85533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[87036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[84971,84972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[84957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[85417,85418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[85613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[86062,86063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[86926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"}]},"cv_name":"mondo","definition":"A disease affects cognitive processes.","direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00115":null,"SJAG_00233":null,"SJAG_00421":null,"SJAG_00526":null,"SJAG_00686":null,"SJAG_01179":null,"SJAG_01229":null,"SJAG_01317":null,"SJAG_01356":null,"SJAG_01438":null,"SJAG_01466":null,"SJAG_02084":null,"SJAG_02119":null,"SJAG_02196":null,"SJAG_02377":null,"SJAG_02518":null,"SJAG_02716":null,"SJAG_02885":null,"SJAG_03052":null,"SJAG_03345":null,"SJAG_03692":null,"SJAG_03712":null,"SJAG_03866":null,"SJAG_04489":null,"SJAG_04757":null,"SJAG_05277":null,"SJAG_05332":null,"SJAG_16459":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"is_obsolete":false,"name":"cognitive disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:443265004","MESH:D019965","DOID:1561","ICD9:294.9","MEDGEN:40371","NCIT:C92196","UMLS:C0009241"],"synonyms":[{"name":"cognitive disease","type":"exact"},{"name":"cognitive disorder","type":"exact"},{"name":"organic mental disorder","type":"related"}],"termid":"MONDO:0002039","terms_by_termid":{"MONDO:0005090":null,"MONDO:0007574":null,"MONDO:0008083":null,"MONDO:0008178":null,"MONDO:0008458":null,"MONDO:0008695":null,"MONDO:0008767":null,"MONDO:0010476":null,"MONDO:0010936":null,"MONDO:0011330":null,"MONDO:0011397":null,"MONDO:0011439":null,"MONDO:0011706":null,"MONDO:0011781":null,"MONDO:0012246":null,"MONDO:0012450":null,"MONDO:0013501":null,"MONDO:0013584":null,"MONDO:0013594":null,"MONDO:0013886":null,"MONDO:0014290":null,"MONDO:0014417":null,"MONDO:0014628":null,"MONDO:0014934":null,"MONDO:0016163":null,"MONDO:0033482":null,"MONDO:0958231":null},"xrefs":{"Monarch":{"xref_id":"0002039"}}}


id: PBO:0045111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermokine","termid":"PBO:0045111"}


id: PBO:0075189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 1","termid":"PBO:0075189"}


id: GO:0046335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanolamine metabolic process","termid":"GO:0006580"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanolamine biosynthetic process","synonyms":[{"name":"ethanolamine anabolism","type":"exact"},{"name":"ethanolamine biosynthesis","type":"exact"},{"name":"ethanolamine formation","type":"exact"},{"name":"ethanolamine synthesis","type":"exact"}],"termid":"GO:0046335"}


id: MOD:01969
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine.","definition_xrefs":["PubMed:9398217","RESID:AA0611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine","synonyms":[{"name":"(2S)-2-amino-5-([(2R)-1-([2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-2-oxoethyl]amino)-1-oxo-3-sulfanylpropan-2-yl]amino)-5-oxopentanoic acid","type":"exact"},{"name":"ACT_SITE S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine intermediate","type":"exact"},{"name":"S-(gamma-glutamyl-cysteinyl-glycyl)-cysteine","type":"exact"},{"name":"S-(glutathion-1-yl)-L-cysteine","type":"exact"}],"termid":"MOD:01969"}


id: PR:Q9UR39
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hst4 gene.","definition_xrefs":["UniProtKB:Q9UR39","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent protein deacetylase hst4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.04c","synonyms":[{"name":"Spom972h-hst4","type":"exact"},{"name":"homologous to SIR2 protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"regulatory protein SIR2 homolog 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR39"}


id: PBO:0057537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 653","termid":"PBO:0057537"}


id: MONDO:0019114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Psychogenic movement disorders (PMD) are movement disorders that cannot be attributed to any known structural or neurochemical diseases, but represent the manifestation of an underlying psychiatric illness or malingering. Most cases of PMD fall in the psychiatric diagnostic category of conversion disorders of the motor subtype.","definition_xrefs":["Orphanet:71519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychogenic movement disorders","secondary_identifiers":["MEDGEN:155722","UMLS:C0752208","GARD:18914","MedDRA:10072376","icd11.foundation:1905355308"],"synonyms":[{"name":"psychogenic dystonia","type":"exact"}],"termid":"MONDO:0019114","xrefs":{"Monarch":{"xref_id":"0019114"}}}


id: PBO:0084658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mismatch repair protein; forms dimers with Msh2p that mediate repair of insertion or deletion mutations and removal of nonhomologous DNA ends, contains a PCNA (Pol30p) binding motif required for genome stability","termid":"PBO:0084658"}


id: PBO:0085276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal malate dehydrogenase; catalyzes interconversion of malate and oxaloacetate; involved in the glyoxylate cycle; mutation in human homolog MDH2 causes early-onset severe encephalopathy","termid":"PBO:0085276"}


id: GO:0034345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of type III interferon production. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["PMID:15546383","PMID:16734557","ISBN:0126896631","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of type III interferon production","termid":"GO:0034344"},{"relation_name":"negatively_regulates","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of type III interferon production","synonyms":[{"name":"down regulation of type III interferon production","type":"exact"},{"name":"down-regulation of type III interferon production","type":"exact"},{"name":"downregulation of type III interferon production","type":"exact"},{"name":"inhibition of type III interferon production","type":"narrow"},{"name":"negative regulation of type III IFN production","type":"exact"}],"termid":"GO:0034345"}


id: PBO:0077524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 238 like","termid":"PBO:0077524"}


id: GO:0050847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a progesterone binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:14744870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"progesterone receptor signaling pathway","synonyms":[{"name":"intracellular progesterone receptor signaling pathway","type":"exact"},{"name":"nuclear receptor-mediated progesterone signaling pathway","type":"exact"},{"name":"progesterone receptor signalling pathway","type":"exact"}],"termid":"GO:0050847"}


id: GO:0055076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of transition metal ions within an organism or cell. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["GOC:jid","GOC:mah","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete transition metal ion homeostasis (obsolete GO:0055076)","termid":"GO:0055076"}


id: MONDO:0019018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Takotsubo cardiomyopathy (TC) is a recently described acute cardiac syndrome that mimics acute myocardial infarction and is characterized by ischemic chest symptoms, an elevated ST segment on electrocardiogram, and elevated levels of cardiac disease markers.","definition_xrefs":["Orphanet:66529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Tako-tsubo cardiomyopathy","secondary_identifiers":["NCIT:C85181","EFO:1002000","SCTID:441541008","UMLS:C1739395","ICD9:429.83","MEDGEN:366029","MESH:D054549","NORD:2006","GARD:9400","icd11.foundation:478139552"],"synonyms":[{"name":"ASC","type":"related"},{"name":"Tako tsubo syndrome","type":"related"},{"name":"Tako-Tsubo syndrome","type":"exact"},{"name":"Takotsubo Cardiomyopathy","type":"exact"},{"name":"Takotsubo cardiomyopathy","type":"exact"},{"name":"Takotsubo syndrome","type":"exact"},{"name":"acute stress cardiomyopathy","type":"related"},{"name":"ampulla cardiomyopathy","type":"exact"},{"name":"apical ballooning syndrome","type":"exact"},{"name":"ballooning cardiomyopathy","type":"exact"},{"name":"broken heart syndrome","type":"exact"},{"name":"broken-heart syndrome","type":"related"},{"name":"left ventricular transient apical ballooning","type":"related"},{"name":"stress cardiomyopathy","type":"exact"},{"name":"stress-induced cardiomyopathy","type":"related"},{"name":"transient antero-apical dyskinesia","type":"related"},{"name":"transient left ventricular apical ballooning syndrome","type":"exact"}],"termid":"MONDO:0019018","xrefs":{"Monarch":{"xref_id":"0019018"}}}


id: MONDO:0016443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired form of collagenoma that appears in childhood. It is characterized by discrete, firm, skin-colored, and slightly elevated cutaneous papules, nodules or plaques that may be generalized, or found on the trunk and the extremities.","definition_xrefs":["NCIT:C4707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"papular elastorrhexis","secondary_identifiers":["UMLS:C5680907","GARD:20583","icd11.foundation:1231672259","Orphanet:228264","SCTID:239138008","MEDGEN:1813032"],"synonyms":[{"name":"Nevus anelasticus","type":"exact"},{"name":"disseminated nevus anelasticus","type":"exact"},{"name":"eruptive collagenoma","type":"exact"}],"termid":"MONDO:0016443","xrefs":{"Monarch":{"xref_id":"0016443"}}}


id: PBO:0052696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 4","termid":"PBO:0052696"}


id: PBO:0059748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 22","termid":"PBO:0059748"}


id: PBO:0017745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1-type Uba5 (predicted)","termid":"PBO:0017745"}


id: PBO:0070898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 6","termid":"PBO:0070898"}


id: PBO:0048122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 3 (Lewis blood group)","termid":"PBO:0048122"}


id: PBO:0087186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC10-alpha, found in RNA pol I, II, and III; relocalizes from nucleolus to cytoplasm upon DNA replication stress","termid":"PBO:0087186"}


id: PBO:0043862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine O-acetyltransferase","termid":"PBO:0043862"}


id: PBO:0056366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 3","termid":"PBO:0056366"}


id: GO:0071851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during G1 phase, as a result of deprivation of nitrogen.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:0071851)","synonyms":[{"name":"G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"}],"termid":"GO:0071851"}


id: MONDO:0013088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"follicular lymphoma","termid":"MONDO:0018906"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular lymphoma, susceptibility to, 1","secondary_identifiers":["UMLS:C2751665","OMIM:613024","MEDGEN:442784"],"synonyms":[{"name":"FL1","type":"exact"},{"name":"follicular lymphoma, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0013088","xrefs":{"Monarch":{"xref_id":"0013088"}}}


id: MONDO:0024529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial mitral valve prolapse","termid":"MONDO:0008004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"MVP1","secondary_identifiers":["OMIM:157700","UMLS:C1834819","GARD:3688","MEDGEN:320443"],"synonyms":[{"name":"MVP1","type":"exact"},{"name":"PMV","type":"related"},{"name":"barlow syndrome","type":"related"},{"name":"click-murmur syndrome","type":"related"},{"name":"floppy mitral valve","type":"related"},{"name":"mitral regurgitation, familial","type":"related"},{"name":"mitral valve prolapse 1","type":"related"},{"name":"mitral valve prolapse, familial","type":"related"},{"name":"mitral valve prolapse, familial, X-linked","type":"related"},{"name":"mitral valve prolapse, myxomatous 1","type":"related"},{"name":"myxomatous mitral valve prolapse 1","type":"related"},{"name":"myxomatous valvular disease, familial","type":"related"},{"name":"prolapsed mitral valve","type":"related"}],"termid":"MONDO:0024529","xrefs":{"Monarch":{"xref_id":"0024529"}}}


id: GO:0071116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta1 integrin complex bound to CYR61, a cysteine-rich protein involved in angiogenesis.","definition_xrefs":["PMID:12826661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha6-beta1 integrin-CYR61 complex","synonyms":[{"name":"ITGA6-ITGB1-CYR61 complex","type":"narrow"}],"termid":"GO:0071116"}


id: GO:0140832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + L-histidine(out) + Na+(out) = H+(out) + L-histidine(in) + Na+(in).","definition_xrefs":["PMID:10619430","PMID:11742981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-histidine transmembrane transporter activity","termid":"GO:0005290"},{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"},{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-histidine, sodium:proton antiporter activity","secondary_identifiers":["RHEA:71135"],"termid":"GO:0140832"}


id: PBO:0091602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid10","termid":"PBO:0091602"}


id: FYPO:0004811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II is abnormal. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["GO:0006369","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription","synonyms":[{"name":"abnormal RNA polymerase II transcription termination","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0004811"}


id: PBO:0078526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16 like","termid":"PBO:0078526"}


id: GO:0051453
data:
  {"annotated_genes":["SJAG_02023","SJAG_04955","SJAG_01817","SJAG_00301","SJAG_01129","SJAG_01913","SJAG_01397","SJAG_04616","SJAG_01669","SJAG_04258","SJAG_05294","SJAG_00212","SJAG_03962","SJAG_00136","SJAG_00516","SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70379,71255,72985,77646],"is_not":false,"summary":null,"term":"GO:0051453"},{"annotations":[78284,87798,101391,103664,73791,70647,72788,79873,95409,72441,95589,99774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular pH","termid":"GO:0030641"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02716":null,"SJAG_03962":null,"SJAG_04258":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular pH","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell pH regulation","type":"exact"},{"name":"cellular pH regulation","type":"exact"},{"name":"pH regulation in cell","type":"exact"},{"name":"regulation of cell pH","type":"exact"}],"termid":"GO:0051453","terms_by_termid":{"GO:0007035":null,"GO:0051453":null}}


id: PBO:0054251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1634","termid":"PBO:0054251"}


id: MONDO:0017341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"virus associated tumor","secondary_identifiers":["UMLS:C5681008","GARD:21145","Orphanet:289635","MEDGEN:1842723"],"termid":"MONDO:0017341","xrefs":{"Monarch":{"xref_id":"0017341"}}}


id: GO:0043211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of carbohydrates and their derivatives across a membrane.","definition_xrefs":["GOC:mlg","EC:7.5.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type carbohydrate transporter activity","synonyms":[{"name":"ATP-dependent carbohydrate transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled carbohydrate transmembrane transporter activity","type":"broad"},{"name":"carbohydrate ABC transporter","type":"narrow"},{"name":"carbohydrate-transporting ATPase activity","type":"exact"}],"termid":"GO:0043211"}


id: GO:0050481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-mandelate + 5,6,7,8-tetrahydrobiopterin + O2 = (S)-4-hydroxymandelate + 7,8-dihydrobiopterin + H2O. (S)-2-hydroxy-2-phenylacetate is also known as S-mandelate.","definition_xrefs":["RHEA:21716","EC:1.14.16.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"mandelate 4-monooxygenase activity","secondary_identifiers":["MetaCyc:MANDELATE-4-MONOOXYGENASE-RXN","KEGG_REACTION:R03794"],"synonyms":[{"name":"(S)-2-hydroxy-2-phenylacetate,tetrahydrobiopterin:oxygen oxidoreductase (4-hydroxylating)","type":"related"},{"name":"L-mandelate 4-hydroxylase activity","type":"exact"},{"name":"mandelic acid 4-hydroxylase activity","type":"related"}],"termid":"GO:0050481"}


id: PBO:0059772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 46","termid":"PBO:0059772"}


id: PBO:0089361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin","termid":"PBO:0089361"}


id: GO:0042823
data:
  {"annotated_genes":["SJAG_01383","SJAG_00691","SJAG_00252","SJAG_00707","SJAG_01881","SJAG_00283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64007,75295],"is_not":false,"summary":null,"term":"GO:0042823"},{"annotations":[92584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[74983,77931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[111573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"},{"relation_name":"is_a","term_name":"pyridoxal phosphate metabolic process","termid":"GO:0042822"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"pyridoxal phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:PWY0-845"],"synonyms":[{"name":"active vitamin B6 biosynthesis","type":"exact"},{"name":"active vitamin B6 biosynthetic process","type":"exact"},{"name":"pyridoxal phosphate anabolism","type":"exact"},{"name":"pyridoxal phosphate biosynthesis","type":"exact"},{"name":"pyridoxal phosphate formation","type":"exact"},{"name":"pyridoxal phosphate synthesis","type":"exact"}],"termid":"GO:0042823","terms_by_termid":{"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042823":null}}


id: PBO:0055390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2820","termid":"PBO:0055390"}


id: PBO:0072627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 2","termid":"PBO:0072627"}


id: PBO:0005587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase subunit Naa50 (predicted)","termid":"PBO:0005587"}


id: PBO:0048771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchored molecule like","termid":"PBO:0048771"}


id: GO:0019480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine to pyruvate, with D-alanine as an intermediate.","definition_xrefs":["MetaCyc:ALADEG-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"L-alanine oxidation to pyruvate via D-alanine","termid":"GO:0019480"}


id: MONDO:0016909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 10","termid":"MONDO:0016875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial monosomy of the long arm of chromosome 10","secondary_identifiers":["Orphanet:262083","icd11.foundation:376045936","GARD:20830","MEDGEN:162778","UMLS:C0795839"],"synonyms":[{"name":"partial deletion of chromosome 10q","type":"exact"},{"name":"partial deletion of the long arm of chromosome 10","type":"exact"},{"name":"partial monosomy of chromosome 10q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome type 10","type":"exact"}],"termid":"MONDO:0016909","xrefs":{"Monarch":{"xref_id":"0016909"}}}


id: PBO:0029240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_telomeric_heterochromatin_during_vegetative_growth","termid":"PBO:0029240"}


id: PBO:0000118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght3","termid":"PBO:0000118"}


id: PR:O14207
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mus7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mms22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.02c","synonyms":[{"name":"Spom972h-mus7","type":"exact"},{"name":"protein mus7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14207"}


id: PBO:0038968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoethanethiol dioxygenase","termid":"PBO:0038968"}


id: MONDO:0018024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare skin disorder of unknown etiology affecting children. It is a photodermatitis, characterized by the formation of vesicles and scarring on sun exposed areas.","definition_xrefs":["NCIT:C84766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hydroa vacciniforme","secondary_identifiers":["SCTID:200837006","icd11.foundation:2053786485","UMLS:C0020241","Orphanet:330058","MESH:D006837","GARD:9654","MEDGEN:5661"],"synonyms":[{"name":"hV","type":"related"}],"termid":"MONDO:0018024","xrefs":{"Monarch":{"xref_id":"0018024"}}}


id: FYPO:0001381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal protein kinase activity","termid":"FYPO:0001381"}


id: PBO:0075177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 7","termid":"PBO:0075177"}


id: PBO:0058375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4747","termid":"PBO:0058375"}


id: GO:1901971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA-5-methylcytosine glycosylase activity.","definition_xrefs":["GOC:TermGenie","PMID:23316050"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-5-methylcytosine glycosylase activity (obsolete GO:1901971)","termid":"GO:1901971"}


id: FYPO:0001255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to the level of oxygen is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein level during cellular response to oxygen","synonyms":[{"name":"increased protein accumulation during cellular response to oxygen","type":"related"},{"name":"increased protein level during cellular response to oxygen during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to oxygen during vegetative growth","type":"exact"},{"name":"increased protein level during cellular response to oxygen levels","type":"exact"}],"termid":"FYPO:0001255"}


id: PBO:0082436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Broad-specificity lysophospholipid acyltransferase; part of MBOAT family of membrane-bound O-acyltransferases; key component of Lands cycle; may have role in fatty acid exchange at sn-2 position of mature glycerophospholipids","termid":"PBO:0082436"}


id: PBO:0067239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 310, pseudogene","termid":"PBO:0067239"}


id: PBO:0108923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRNT1 pseudogene 1","termid":"PBO:0108923"}


id: MONDO:0021192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from tooth-forming tissues. It occurs in the maxillofacial skeleton or the gingiva. Benign tumors are slow growing and are not associated with specific clinical symptoms. Pain is absent or slight. Malignant tumors are usually associated with rapid swelling and pain.","definition_xrefs":["NCIT:C3286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontogenic neoplasm","secondary_identifiers":["ICDO:9270/1","MEDGEN:10426","UMLS:C0028880","MESH:D009808"],"synonyms":[{"name":"calcareous tooth neoplasm","type":"exact"},{"name":"calcareous tooth neoplasm (disease)","type":"exact"},{"name":"calcareous tooth tumor","type":"exact"},{"name":"calcareous tooth tumour","type":"exact"},{"name":"neoplasm of calcareous tooth","type":"exact"},{"name":"odontogenic neoplasm","type":"exact"},{"name":"odontogenic tumor","type":"exact"},{"name":"odontogenic tumour","type":"exact"},{"name":"tumor of calcareous tooth","type":"exact"},{"name":"tumour of calcareous tooth","type":"exact"}],"termid":"MONDO:0021192","xrefs":{"Monarch":{"xref_id":"0021192"}}}


id: PBO:0029962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_hydrogen_ion_transporting_ATP_synthase_activity,_rotational_mechanism","termid":"PBO:0029962"}


id: MONDO:1012596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in humpback whales due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, humpback whale","secondary_identifiers":["OMIA:000202-9773"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Megaptera novaeangliae (humpback whale)","type":"exact"}],"termid":"MONDO:1012596","xrefs":{"Monarch":{"xref_id":"1012596"}}}


id: PBO:0086263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates telomeric length; protects telomeric ends in a complex with Cdc13p and Stn1p; similar to human Ten1 which is critical for the telomeric function of the CST (Cdc13p-Stn1p-Ten1p) complex","termid":"PBO:0086263"}


id: GO:0097355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into heterochromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to heterochromatin","synonyms":[{"name":"protein localisation to heterochromatin","type":"exact"}],"termid":"GO:0097355"}


id: GO:2000235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of tRNA metabolic process","termid":"GO:1903326"},{"relation_name":"regulates","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"regulation of tRNA processing","synonyms":[{"name":"regulation of tRNA maturation","type":"exact"}],"termid":"GO:2000235"}


id: PBO:0074057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 36","termid":"PBO:0074057"}


id: GO:0180038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin L and cyclin-dependent kinase 11 (CDK11). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:23122962","PMID:32446654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin L-CDK11 complex","synonyms":[{"name":"Cdk11-Cyclin L complex","type":"exact"}],"termid":"GO:0180038"}


id: PR:Q9P380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr2 gene.","definition_xrefs":["UniProtKB:Q9P380","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide transporter ptr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.04c","synonyms":[{"name":"Spom972h-ptr2","type":"exact"},{"name":"peptide permease ptr2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P380"}


id: PBO:0041485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 98","termid":"PBO:0041485"}


id: PBO:0038443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipogenesis associated Mth938 domain containing","termid":"PBO:0038443"}


id: PBO:0049145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 2","termid":"PBO:0049145"}


id: GO:0043856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of binding to an anti-sigma factor and stopping, preventing or reducing the rate of its activity.","definition_xrefs":["GOC:jl","GOC:txnOH","PMID:15576799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140110"],"is_obsolete":false,"name":"anti-sigma factor antagonist activity","synonyms":[{"name":"anti-anti-sigma factor activity","type":"exact"}],"termid":"GO:0043856"}


id: PBO:0113077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase; has ten cyclin partners; involved in regulating the cellular response to nutrient levels, environmental conditions and progression through the cell cycle; involved in the hyperphosphorylation of Srl3p (Whi7p), regulating protein stability, mRNA levels and promotion of START; human lissencephaly-associated homolog CDK5 functionally complements null mutation","termid":"PBO:0113077"}


id: PBO:0038584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acyltransferase 1","termid":"PBO:0038584"}


id: PBO:0002604
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAG acceptor","termid":"PBO:0002604"}


id: PBO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APAF1 interacting protein","termid":"PBO:0039702"}


id: FYPO:0004582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but its occurrence is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","termid":"FYPO:0001000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000298","FYPO:0000257","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"increased cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"increased mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"increased mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"increased nitrogen deprivation-induced G1 arrest","type":"exact"}],"termid":"FYPO:0004582"}


id: GO:0004659
data:
  {"annotated_genes":["SJAG_04568","SJAG_03810","SJAG_04923","SJAG_03352","SJAG_03029","SJAG_06603","SJAG_00554","SJAG_00580","SJAG_02583","SJAG_04434","SJAG_02719","SJAG_01865","SJAG_02163","SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58167,67464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004337"},{"annotations":[77070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008412"},{"annotations":[119236,119237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097269"},{"annotations":[71095,73711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004662"},{"annotations":[71752,74236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045547"},{"annotations":[99360,109235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004311"},{"annotations":[71094,73355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004660"},{"annotations":[78033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008495"},{"annotations":[101160,73558,78640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004663"},{"annotations":[75931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051996"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_00580":null,"SJAG_01865":null,"SJAG_02163":null,"SJAG_02583":null,"SJAG_02719":null,"SJAG_03029":null,"SJAG_03173":null,"SJAG_03352":null,"SJAG_03810":null,"SJAG_04434":null,"SJAG_04568":null,"SJAG_04923":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"prenyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:29191091":null},"secondary_identifiers":["Reactome:R-HSA-6806674"],"termid":"GO:0004659","terms_by_termid":{"GO:0004311":null,"GO:0004337":null,"GO:0004660":null,"GO:0004662":null,"GO:0004663":null,"GO:0006743":null,"GO:0006744":null,"GO:0008412":null,"GO:0008495":null,"GO:0045547":null,"GO:0051996":null,"GO:0097269":null}}


id: MOD:00160
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to an N4-glycosyl-L-asparagine.","definition_xrefs":["PubMed:1694179","PubMed:5490222","RESID:AA0151#var","PubMed:111247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-glycosyl-L-asparagine","synonyms":[{"name":"N4GlycoAsn","type":"exact"}],"termid":"MOD:00160"}


id: GO:0060515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of a specific region of the urogenital sinus epithelium into the area in which the prostate gland will develop.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate field specification","termid":"GO:0060515"}


