# terms

id: CHEBI:69136
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latrunculin A","termid":"CHEBI:69136"}


id: PBO:0069867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1154, pseudogene","termid":"PBO:0069867"}


id: PBO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP298-TCP10L readthrough","termid":"PBO:0042885"}


id: GO:0044307
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite arising from another dendrite.","definition_xrefs":["GOC:bc","GOC:aruk","NIF_Subcellular:sao884265541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic branch","synonyms":[{"name":"dendrite branch","type":"exact"},{"name":"secondary dendrite","type":"narrow"}],"termid":"GO:0044307"}


id: SO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A T-cell receptor germline gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene","termid":"SO:0002121"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_cell_receptor_gene","synonyms":[{"name":"TR_gene","type":"exact"}],"termid":"SO:0002133"}


id: PBO:0038834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 7","termid":"PBO:0038834"}


id: GO:1902512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic DNA fragmentation.","definition_xrefs":["GOC:hjd","GOC:TermGenie","PMID:15572351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic DNA fragmentation","termid":"GO:1902510"},{"relation_name":"is_a","term_name":"positive regulation of DNA catabolic process","termid":"GO:1903626"},{"relation_name":"positively_regulates","term_name":"apoptotic DNA fragmentation","termid":"GO:0006309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic DNA fragmentation","synonyms":[{"name":"activation of DNA catabolic process during apoptosis","type":"narrow"},{"name":"activation of DNA catabolism during apoptosis","type":"narrow"},{"name":"activation of DNA fragmentation involved in apoptotic nuclear change","type":"narrow"},{"name":"activation of apoptotic DNA fragmentation","type":"narrow"},{"name":"activation of endonucleolytic DNA catabolic process involved in apoptosis","type":"narrow"},{"name":"positive regulation of DNA catabolic process during apoptosis","type":"exact"},{"name":"positive regulation of DNA catabolism during apoptosis","type":"exact"},{"name":"positive regulation of DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"positive regulation of endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"},{"name":"up regulation of DNA catabolic process during apoptosis","type":"exact"},{"name":"up regulation of DNA catabolism during apoptosis","type":"exact"},{"name":"up regulation of DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"up regulation of apoptotic DNA fragmentation","type":"exact"},{"name":"up regulation of endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"},{"name":"up-regulation of DNA catabolic process during apoptosis","type":"exact"},{"name":"up-regulation of DNA catabolism during apoptosis","type":"exact"},{"name":"up-regulation of DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"up-regulation of apoptotic DNA fragmentation","type":"exact"},{"name":"up-regulation of endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"},{"name":"upregulation of DNA catabolic process during apoptosis","type":"exact"},{"name":"upregulation of DNA catabolism during apoptosis","type":"exact"},{"name":"upregulation of DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"upregulation of apoptotic DNA fragmentation","type":"exact"},{"name":"upregulation of endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"}],"termid":"GO:1902512"}


id: PBO:0075007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-18","termid":"PBO:0075007"}


id: GO:0051656
data:
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id: PBO:0044684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDIT4L antisense RNA 1","termid":"PBO:0044684"}


id: MONDO:0004076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor, composed of mature adipocytes, that arises within the tendon sheath.","definition_xrefs":["NCIT:C6499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign synovial neoplasm","termid":"MONDO:0024715"},{"relation_name":"is_a","term_name":"tendon sheath disorder","termid":"MONDO:0024876"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tendon sheath lipoma","secondary_identifiers":["DOID:7016","MEDGEN:277806","UMLS:C1336703"],"synonyms":[{"name":"lipoma of tendon sheath","type":"exact"},{"name":"lipoma of the tendon sheath","type":"exact"},{"name":"tendon sheath lipoma","type":"exact"}],"termid":"MONDO:0004076","xrefs":{"Monarch":{"xref_id":"0004076"}}}


id: PBO:0041877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"castor zinc finger 1","termid":"PBO:0041877"}


id: GO:1990382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form a melanosome, a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:22511774"],"gene_count":0,"genotype_count":0,"name":"obsolete melanosome assembly (obsolete GO:1990382)","synonyms":[{"name":"melanosome biogenesis","type":"exact"}],"termid":"GO:1990382"}


id: GO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, alpha-beta cytotoxic T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"},{"relation_name":"is_a","term_name":"cytotoxic T cell differentiation","termid":"GO:0045065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta cytotoxic T cell differentiation","synonyms":[{"name":"CD8-positive, alpha-beta cytotoxic T cell development","type":"related"},{"name":"CD8-positive, alpha-beta cytotoxic T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta cytotoxic T-cell differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta cytotoxic T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002308"}


id: PBO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding splicing factor (predicted)","termid":"PBO:0001924"}


id: SO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, located immediately upstream of some TATA box elements at -37 to -32 with respect to the TSS (+1). Consensus sequence is (G|C)(G|C)(G|A)CGCC. Binds TFIIB.","definition_xrefs":["PMID:12651739","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BREu_motif","synonyms":[{"name":"B-recognition element","type":"exact"},{"name":"BRE motif","type":"exact"},{"name":"BREu","type":"related"},{"name":"BREu motif","type":"exact"},{"name":"TFIIB recognition element","type":"related"},{"name":"transcription factor B-recognition element","type":"exact"}],"termid":"SO:0000016"}


id: MONDO:0014845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive cerebellar ataxia in which the cause of the disease is a mutation in the VWA3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 22","secondary_identifiers":["OMIM:616948","MEDGEN:934748","UMLS:C4310781","DOID:0111614"],"synonyms":[{"name":"SCAR22","type":"exact"},{"name":"VWA3B autosomal recessive cerebellar ataxia","type":"exact"},{"name":"autosomal recessive cerebellar ataxia caused by mutation in VWA3B","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 22","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 22; SCAR22","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive type 22","type":"exact"}],"termid":"MONDO:0014845","xrefs":{"Monarch":{"xref_id":"0014845"}}}


id: PBO:0079313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 6B","termid":"PBO:0079313"}


id: SO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Primarily found in animals, the terminal inverted repeat (TIR) transposon superfamily piggyBac elements favour insertion adjacent to TTAA.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac_TIR_transposon","synonyms":[{"name":"DTB transposon","type":"exact"},{"name":"PiggyBac transposable element","type":"exact"},{"name":"piggyBac TIR transposon","type":"exact"}],"termid":"SO:0002283"}


id: GO:0004159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydropyrimidine (5,6-dihydrouracil or 5,6-dihydrothymine) + NAD+ = a pyrimidine (uracil or thymine) + NADH + H+.","definition_xrefs":["PMID:23150645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:DIHYDROURACIL-DEHYDROGENASE-NAD+-RXN","EC:1.3.1.1"],"synonyms":[{"name":"5,6-dihydrouracil:NAD+ oxidoreductase activity","type":"related"},{"name":"dihydrothymine dehydrogenase (NAD+) activity","type":"narrow"},{"name":"dihydrouracil dehydrogenase (NAD+) activity","type":"narrow"},{"name":"pyrimidine reductase activity","type":"related"},{"name":"thymine reductase activity","type":"narrow"},{"name":"uracil reductase activity","type":"narrow"}],"termid":"GO:0004159"}


id: GO:0090435
data:
  {"annotated_genes":["SJAG_02757","SJAG_02210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74889,76828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036228"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location within a nuclear envelope.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02210":null,"SJAG_02757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nuclear envelope","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protein localization in nuclear envelope","type":"exact"}],"termid":"GO:0090435","terms_by_termid":{"GO:0036228":null}}


id: PBO:0046252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 1","termid":"PBO:0046252"}


id: GO:0051407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerone phosphate(out) + phosphate(in) = glycerone phosphate(in) + phosphate(out).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glycerone phosphate:phosphate antiporter activity","synonyms":[{"name":"dihydroxyacetone-phosphate:inorganic phosphate antiporter activity","type":"exact"},{"name":"glycerone phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0051407"}


id: PBO:0081818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 11, Y-linked","termid":"PBO:0081818"}


id: MONDO:0024653
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the bones and structures of the skull.","definition_xrefs":["NCIT:C3375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"skull disorder","termid":"MONDO:0024654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"skull neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:11457","ICD9:239.2","MESH:D012888","SCTID:126538005","UMLS:C0037305"],"synonyms":[{"name":"neoplasm of skull","type":"exact"},{"name":"neoplasm of the skull","type":"exact"},{"name":"skull neoplasm","type":"exact"},{"name":"skull tumor","type":"exact"},{"name":"skull tumour","type":"exact"},{"name":"tumor of skull","type":"exact"},{"name":"tumor of the skull","type":"exact"},{"name":"tumour of skull","type":"exact"},{"name":"tumour of the skull","type":"exact"}],"termid":"MONDO:0024653","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0024653"}}}


id: MONDO:0013845
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86076],"is_not":false,"summary":null,"term":"MONDO:0013845"}]},"cv_name":"mondo","definition":"Any auriculocondylar syndrome in which the cause of the disease is a mutation in the PLCB4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auriculocondylar syndrome","termid":"MONDO:0000107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"auriculocondylar syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553404","OMIM:614669","MEDGEN:766318","GARD:15831"],"synonyms":[{"name":"ARCND2","type":"related"},{"name":"AURICULOCONDYLAR syndrome 2","type":"related"},{"name":"Auriculocondylar syndrome 2","type":"exact"},{"name":"Auriculocondylar syndrome type 2","type":"exact"},{"name":"PLCB4 auriculocondylar syndrome","type":"exact"},{"name":"auriculocondylar syndrome caused by mutation in PLCB4","type":"exact"}],"termid":"MONDO:0013845","terms_by_termid":{"MONDO:0013845":null},"xrefs":{"Monarch":{"xref_id":"0013845"}}}


id: GO:1901556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a candesartan stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to candesartan","termid":"GO:1901556"}


id: PATO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering a bearer by virtue of the bearer's containing or resembling serum.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous","termid":"PATO:0002128"}


id: PBO:0091497
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single polypeptide of 70 kDa is produced","termid":"PBO:0091497"}


id: PBO:0067468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 597, pseudogene","termid":"PBO:0067468"}


id: PBO:0084005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerophosphocholine (GroPCho) phosphodiesterase; hydrolyzes GroPCho to choline and glycerolphosphate, for use as a phosphate source and as a precursor for phosphocholine synthesis; may interact with ribosomes","termid":"PBO:0084005"}


id: PBO:0077757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 20 like","termid":"PBO:0077757"}


id: GO:0016327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The apical end of the lateral plasma membrane of epithelial cells.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"apicolateral plasma membrane","synonyms":[{"name":"apical lateral plasma membrane","type":"exact"}],"termid":"GO:0016327"}


id: GO:0030629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U6 small nuclear RNA (U6 snRNA) at the 3' end.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U6 snRNA binding","termid":"GO:0017070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"U6 snRNA 3'-end binding","synonyms":[{"name":"U6 snRNA 3' end binding","type":"exact"}],"termid":"GO:0030629"}


id: PBO:0005797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk34","termid":"PBO:0005797"}


id: GO:0071962
data:
  {"annotated_genes":["SJAG_03418","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90688,98886],"is_not":false,"summary":null,"term":"GO:0071962"}]},"cv_name":"biological_process","definition":"The cell cycle process in which centromeres of sister chromatids are joined during mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"},{"relation_name":"is_a","term_name":"centromeric sister chromatid cohesion","termid":"GO:0070601"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01601":null,"SJAG_03418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic sister chromatid cohesion, centromeric","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"sister chromatid cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:0071962","terms_by_termid":{"GO:0071962":null}}


id: PR:P87306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb4 gene.","definition_xrefs":["UniProtKB:P87306","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.04c","synonyms":[{"name":"Spom972h-srb4","type":"exact"},{"name":"mediator complex subunit 17 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 4 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87306"}


id: PBO:0062464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 155 pseudogene","termid":"PBO:0062464"}


id: GO:0009069
data:
  {"annotated_genes":["SJAG_03861","SJAG_03914","SJAG_01880","SJAG_00881","SJAG_02901","SJAG_00582","SJAG_04449","SJAG_02290","SJAG_04305","SJAG_02450","SJAG_02313","SJAG_02791","SJAG_02972","SJAG_01766","SJAG_03641","SJAG_03290","SJAG_00234","SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77166,72486,75935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[110256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019343"},{"annotations":[71796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[71769,73181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[87188,74022,77735,96163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[73353,115526,70885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[110257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[100427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[116651,60889,79363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00582":null,"SJAG_00881":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_02290":null,"SJAG_02313":null,"SJAG_02450":null,"SJAG_02791":null,"SJAG_02901":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_04305":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"serine family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid metabolism","type":"exact"}],"termid":"GO:0009069","terms_by_termid":{"GO:0006535":null,"GO:0006545":null,"GO:0006564":null,"GO:0009090":null,"GO:0019264":null,"GO:0019280":null,"GO:0019343":null,"GO:0019464":null,"GO:0071269":null}}


id: PBO:0030362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_oxygen","termid":"PBO:0030362"}


id: PBO:0073839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A14 antisense RNA 1","termid":"PBO:0073839"}


id: PBO:0050488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXB cluster antisense RNA 3","termid":"PBO:0050488"}


id: MONDO:1011660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"upper digestive tract disorder, non-human animal","termid":"MONDO:1011364"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, non-human animal","secondary_identifiers":["OMIA:000631"],"termid":"MONDO:1011660","xrefs":{"Monarch":{"xref_id":"1011660"}}}


id: MONDO:0005937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by episodes of vigorous and often violent motor activity during rem sleep (sleep, rem). The affected individual may inflict self injury or harm others, and is difficult to awaken from this condition. Episodes are usually followed by a vivid recollection of a dream that is consistent with the aggressive behavior. This condition primarily affects adult males. (From Adams et al., Principles of Neurology, 6th ed, p393)","definition_xrefs":["MESH:D020187"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REM sleep behavior disorder","secondary_identifiers":["SCTID:415238003","ICD10CM:G47.52","ICD9:327.42","EFO:0007462","UMLS:C0751772","DOID:9091","MEDGEN:199730","ICD9:780.59"],"synonyms":[{"name":"rapid eye movement sleep behavior disorder","type":"exact"},{"name":"rapid eye movement sleep behaviour disorder","type":"exact"}],"termid":"MONDO:0005937","xrefs":{"Monarch":{"xref_id":"0005937"}}}


id: PBO:0059380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 5","termid":"PBO:0059380"}


id: PATO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the middle relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial to","termid":"PATO:0001191"}


id: PBO:0087935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational elongation factor EF-1 alpha; GTP-bound active form, binds to and delivers aminoacylated tRNA to the A-site of ribosomes for elongation of nascent polypeptides; moonlighting function as an actin binding and bundling protein; association with GTPase Rho1p on the vacuolar membrane may facilitate F-actin remodeling; involved in tRNA re-export from the nucleus; Tef2p-RFP levels increase during replicative aging","termid":"PBO:0087935"}


id: PBO:0028923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_glucose_starvation","termid":"PBO:0028923"}


id: GO:0009162
data:
  {"annotated_genes":["SJAG_04627","SJAG_01974","SJAG_03771","SJAG_01055","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116920,75429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009159"},{"annotations":[79135,69705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[69704,79243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a deoxyribonucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01974":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009162","terms_by_termid":{"GO:0006226":null,"GO:0006231":null,"GO:0009159":null}}


id: PBO:0085657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in modulation of Ime2p activity during meiosis; appears to act indirectly to promote Ime2p-mediated late meiotic functions; found in growing cells and degraded during sporulation","termid":"PBO:0085657"}


id: SO:0001029
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of whether the sequence is the same direction as a feature (forward) or the opposite direction as a feature (reverse).","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direction_attribute","synonyms":[{"name":"direction attribute","type":"exact"}],"termid":"SO:0001029"}


id: MOD:01737
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated N-terminal","termid":"MOD:01718"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01737"}


id: PBO:0086856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; involved in regulation of early and middle sporulation genes; forms amyloid-like aggregates under starvation that are active in translational repression","termid":"PBO:0086856"}


id: GO:0035267
data:
  {"annotated_genes":["SJAG_02385","SJAG_00783","SJAG_02990","SJAG_01385","SJAG_03628","SJAG_04097","SJAG_03036","SJAG_03230","SJAG_00187","SJAG_04793","SJAG_03579","SJAG_03792","SJAG_04613","SJAG_04355","SJAG_03145","SJAG_00349","SJAG_05282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67972,72600,72704,73474,73538,75888,77251,77986,78810,79831,79983,92134,98717,103788,104474,106632,108812],"is_not":false,"summary":null,"term":"GO:0035267"}]},"cv_name":"cellular_component","definition":"A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60).","definition_xrefs":["PMID:14966270","PMID:10966108","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4/H2A histone acetyltransferase complex","termid":"GO:0043189"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00187":null,"SJAG_00349":null,"SJAG_00783":null,"SJAG_01385":null,"SJAG_02385":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03628":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04613":null,"SJAG_04793":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TIP60 histone acetylase complex","type":"exact"},{"name":"TIP60 histone acetyltransferase complex","type":"exact"}],"termid":"GO:0035267","terms_by_termid":{"GO:0035267":null}}


id: PATO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part < n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. This case includes the limit case, where the bearer lacks all parts of the specified type.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks parts or has fewer parts of type","synonyms":[{"name":"loss of","type":"exact"}],"termid":"PATO:0001999"}


id: RO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"negatively_regulated_by","termid":"RO:0002335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_negative_regulatory_component_activity","termid":"RO:0002014"}


id: GO:0140670
data:
  {"annotated_genes":["SJAG_04508","SJAG_02606"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87634,110304],"is_not":false,"summary":null,"term":"GO:0140670"}]},"cv_name":"molecular_function","definition":"Facilitating a conformational change to unload a cohesin complex from sister chromatids.","definition_xrefs":["PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02606":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"cohesin unloader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cohesin unloading activity","type":"exact"}],"termid":"GO:0140670","terms_by_termid":{"GO:0140670":null}}


id: PBO:0043436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connector enhancer of kinase suppressor of Ras 2","termid":"PBO:0043436"}


id: PBO:0085096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear polyadenylated RNA-binding protein; required for export of poly(A)+ mRNA from the nucleus; proposed to couple mRNA export with 3' end processing via its interactions with Mex67p and Pcf11p; interacts with DBP2; inhibits the helicase activity of Dbp2; functionally redundant with Yra2p, another REF family member","termid":"PBO:0085096"}


id: PBO:0036321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex WD repeat/ ubiquitin-protein ligase E3 subunit Vps8 (predicted)","termid":"PBO:0036321"}


id: PATO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A compositional quality inhering in an bearer by virtue of the bearer's infiltration by leukocytes, local edema and accumulation of plasma proteins.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory","termid":"PATO:0002104"}


id: GO:0010458
data:
  {"annotated_genes":["SJAG_03048","SJAG_04943","SJAG_00082","SJAG_01801","SJAG_03126","SJAG_04464","SJAG_01050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102117,67662],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0001100"},{"annotations":[102124,89758,93514,111708],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031536"},{"annotations":[110764,69950],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0007096"}]},"cv_name":"biological_process","definition":"The cell cycle transition where a cell leaves M phase and enters a new G1 phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01050":null,"SJAG_01801":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04464":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044772"],"is_obsolete":false,"name":"exit from mitosis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"exit from mitotic division","type":"exact"},{"name":"mitotic exit","type":"exact"}],"termid":"GO:0010458","terms_by_termid":{"GO:0001100":null,"GO:0007096":null,"GO:0031536":null}}


id: MONDO:0700045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with achlorophyllic algae of the genus Prototheca, the majority caused by the species P. wickerhamii. Clinical manifestations of reported cases have included cutaneous lesions, olecranon bursitis, or systemic involvement.","definition_xrefs":["PMID:15124862","MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protothecosis","secondary_identifiers":["UMLS:C0033735","icd11.foundation:2034403589","MEDGEN:508074"],"termid":"MONDO:0700045","xrefs":{"Monarch":{"xref_id":"0700045"}}}


id: GO:0102140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + [heparan sulfate]-N-acetyl-alpha-D-glucosamine = acetate + H+ + [heparan sulfate]-alpha-D-glucosamine.","definition_xrefs":["RHEA:70587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0019213","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"heparan sulfate N-deacetylase activity","termid":"GO:0102140"}


id: MONDO:0004188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spindle cell melanoma that involves the iris.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell intraocular melanoma","termid":"MONDO:0003744"},{"relation_name":"is_a","term_name":"iris melanoma","termid":"MONDO:0004064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"iris spindle cell melanoma","secondary_identifiers":["MEDGEN:232672","NCIT:C6098","DOID:7328","UMLS:C1334287"],"synonyms":[{"name":"iris spindle cell melanoma","type":"exact"},{"name":"spindle cell melanoma of iris","type":"exact"},{"name":"spindle cell melanoma of the iris","type":"exact"}],"termid":"MONDO:0004188","xrefs":{"Monarch":{"xref_id":"0004188"}}}


id: GO:0009142
data:
  {"annotated_genes":["SJAG_00533","SJAG_07003","SJAG_05024","SJAG_01471","SJAG_03708","SJAG_MIT37","SJAG_02887","SJAG_00542","SJAG_00836","SJAG_00438","SJAG_03114","SJAG_00915","SJAG_04657","SJAG_03925","SJAG_02598","SJAG_04627","SJAG_04122","SJAG_04422","SJAG_04665","SJAG_01298","SJAG_04849","SJAG_02564","SJAG_MIT09","SJAG_05204","SJAG_00133","SJAG_00885","SJAG_00985","SJAG_MIT15","SJAG_02105"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[64501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[92734,67733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[68266,92202,70638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[74818,101991,64499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[117745],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[67175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[102787,101571,115588,92618,103405,88889,118812,107562,93632,118807,94602,107654,93050,103434,104771,108543,118801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[107014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[107016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[64500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00533":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03708":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_04849":null,"SJAG_05024":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleoside triphosphate anabolism","type":"exact"},{"name":"nucleoside triphosphate biosynthesis","type":"exact"},{"name":"nucleoside triphosphate formation","type":"exact"},{"name":"nucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009142","terms_by_termid":{"GO:0006183":null,"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009212":null,"GO:0009216":null,"GO:0015986":null,"GO:0042776":null,"GO:0044210":null,"GO:0044211":null,"GO:1905707":null}}


id: PBO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.20","termid":"PBO:0001817"}


id: GO:0048777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leucophore differentiation","termid":"GO:0048775"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leucophore differentiation","synonyms":[{"name":"activation of leucophore differentiation","type":"narrow"},{"name":"stimulation of leucophore differentiation","type":"narrow"},{"name":"up regulation of leucophore differentiation","type":"exact"},{"name":"up-regulation of leucophore differentiation","type":"exact"},{"name":"upregulation of leucophore differentiation","type":"exact"}],"termid":"GO:0048777"}


id: GO:0090565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannitol(out) = protein cysteine + mannitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0016740","GO:0003824","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"protein-phosphocysteine-mannitol phosphotransferase system transporter activity","termid":"GO:0090565"}


id: GO:0033150
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large cytoskeletal structure located at the posterior end of the perinuclear theca of a mammalian sperm head. The nucleus is tightly associated with the calyx, which contains calicin and basic cylicin proteins.","definition_xrefs":["PMID:12243744","PMID:9184090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"perinuclear theca","termid":"GO:0033011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoskeletal calyx","termid":"GO:0033150"}


id: GO:0015826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of threonine, (2R*,3S*)-2-amino-3-hydroxybutanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"threonine transport","synonyms":[{"name":"L-threonine transport","type":"narrow"}],"termid":"GO:0015826"}


id: GO:0072734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a staurosporine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"response to staurosporine","termid":"GO:0072733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to staurosporine","termid":"GO:0072734"}


id: MONDO:0005202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic predisposition to form IgE antibodies in response to exposure to allergens and therefore, for the development of immediate (type I) hypersensitivity and atopic conditions, such as allergic rhinitis; bronchial asthma, atopic dermatitis, and food allergy. Mutations of specific alleles on the long arm of chromosome 5 have been associated with higher levels of IL-4 and IgE and are known as IL-4 promoter polymorphisms.","definition_xrefs":["NCIT:C41366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"atopic IgE-mediated allergic disorder","secondary_identifiers":["ICD9:995.3","MEDGEN:739536","SCTID:115665000","EFO:0002686","UMLS:C1706410"],"synonyms":[{"name":"Atopic allergy","type":"related"},{"name":"atopic state","type":"related"},{"name":"atopy","type":"related"}],"termid":"MONDO:0005202","xrefs":{"Monarch":{"xref_id":"0005202"}}}


id: GO:0140003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 trimethylated at lysine 36.","definition_xrefs":["PMID:15489290","PMID:16364921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674","GO:0140566"],"is_obsolete":false,"name":"histone H3K36me3 reader activity","synonyms":[{"name":"H3-K36me3 modified histone binding","type":"narrow"},{"name":"H3K36me3 modified histone binding","type":"narrow"}],"termid":"GO:0140003"}


id: GO:0015990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons against an electrochemical gradient, using energy from electron transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy coupled proton transmembrane transport, against electrochemical gradient","termid":"GO:0015988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"electron transport coupled proton transport","termid":"GO:0015990"}


id: GO:1903162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any serine transmembrane transporter activity that is involved in serine import into cell.","definition_xrefs":["GOC:TermGenie","ISBN:0-8249-3695-6","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete serine transmembrane transporter activity involved in serine import into cell (obsolete GO:1903162)","synonyms":[{"name":"serine transmembrane transporter activity involved in serine import into cell","type":"exact"}],"termid":"GO:1903162"}


id: GO:0046600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of centriole replication.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of centrosome duplication","termid":"GO:0010826"},{"relation_name":"is_a","term_name":"regulation of centriole replication","termid":"GO:0046599"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"centriole replication","termid":"GO:0007099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"negative regulation of centriole replication","synonyms":[{"name":"down regulation of centriole replication","type":"exact"},{"name":"down-regulation of centriole replication","type":"exact"},{"name":"downregulation of centriole replication","type":"exact"},{"name":"inhibition of centriole replication","type":"narrow"}],"termid":"GO:0046600"}


id: PBO:0075651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 7 pseudogene 1","termid":"PBO:0075651"}


id: PBO:0012580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 1 (predicted)","termid":"PBO:0012580"}


id: GO:0140504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Degradation of a lipid droplet by microautophagy.","definition_xrefs":["PMID:28394250","PMID:29293450","PMID:28838958","PMID:25070953","PMID:29601311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"microlipophagy","synonyms":[{"name":"lipid droplet autophagy","type":"exact"}],"termid":"GO:0140504"}


id: PBO:0076194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 3","termid":"PBO:0076194"}


id: PBO:0048340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 51","termid":"PBO:0048340"}


id: PBO:0087197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA m5C methyltransferase; methylates cytosine at position 2870 of 25S rRNA; has an essential function independent of rRNA methylation; contains seven beta-strand methyltransferase motif; essential for processing and maturation of 27S pre-rRNA and large ribosomal subunit biogenesis; localized to the nucleolus; constituent of 66S pre-ribosomal particles; rRNA methylation defect and lethality are functionally complemented by human NOP2, a gene upregulated in cancer","termid":"PBO:0087197"}


id: MONDO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chikungunya (obsolete MONDO:0000223)","termid":"MONDO:0000223","xrefs":{"Monarch":{"xref_id":"0000223"}}}


id: PBO:0059019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 8","termid":"PBO:0059019"}


id: MONDO:1011179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis that occurs in ass.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis, ass","secondary_identifiers":["OMIA:000755-9793"],"termid":"MONDO:1011179","xrefs":{"Monarch":{"xref_id":"1011179"}}}


id: MONDO:0022781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip palate-tetraphocomelia","termid":"MONDO:0022781","xrefs":{"Monarch":{"xref_id":"0022781"}}}


id: PBO:0049986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 1","termid":"PBO:0049986"}


id: FYPO:0002123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 4,6-pyruvylated D-galactose (4,6-O-[(1R)-1-carboxyethylidene]-D-galactose) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"pyruvylated galactose absent from cell","synonyms":[{"name":"4,6-O-[(1R)-1-carboxyethylidene]-D-galactose absent from cell","type":"exact"},{"name":"4,6-pyruvylated D-galactose absent from cell","type":"exact"},{"name":"PvGal absent from cell","type":"exact"},{"name":"pyruvylated galactose absent from cell during mitotic cell cycle","type":"related"},{"name":"pyruvylated galactose absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002123"}


id: GO:0035004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a phosphatidylinositol = ADP + a phosphatidylinositol 3-phosphate. This reaction is the addition of a phosphate group to phosphatidylinositol or one of its phosphorylated derivatives at the 3' position of the inositol ring.","definition_xrefs":["GOC:bf","PMID:10209156","PMID:9255069"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity (obsolete GO:0035004)","secondary_identifiers":["Wikipedia:Phosphoinositide_3-kinase"],"synonyms":[{"name":"phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0035004"}


id: PBO:0089365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar zinc exporter, ZIP family, Zip2","termid":"PBO:0089365"}


id: PBO:0075010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-21","termid":"PBO:0075010"}


id: GO:0050077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-maleylpyruvate = 3-fumarylpyruvate.","definition_xrefs":["EC:5.2.1.4","MetaCyc:MALEYLPYRUVATE-ISOMERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"maleylpyruvate isomerase activity","secondary_identifiers":["RHEA:17393"],"synonyms":[{"name":"3-maleylpyruvate cis-trans-isomerase activity","type":"related"}],"termid":"GO:0050077"}


id: MONDO:0015740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 18p is an extremely rare chromosomal anomaly with a poorly defined clinical phenotype. Reported manifestations include short stature, mild, moderate or severe developmental delay and intellectual disability, variable but mild facial dysmorphism, and epilepsy.","definition_xrefs":["Orphanet:1715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of the short arm of chromosome 18","termid":"MONDO:0016951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 18p","secondary_identifiers":["MESH:C538307","MEDGEN:419907","UMLS:C2931811","GARD:5323","icd11.foundation:2079728626"],"synonyms":[{"name":"18p duplication","type":"related"},{"name":"18p trisomy","type":"related"},{"name":"Duplication 18p","type":"exact"},{"name":"Duplication of the short arm of chromosome 18","type":"exact"},{"name":"chromosome 18p duplication","type":"related"},{"name":"partial trisomy 18p","type":"related"},{"name":"trisomy of the short arm of chromosome 18","type":"exact"},{"name":"trisomy type 18p","type":"exact"}],"termid":"MONDO:0015740","xrefs":{"Monarch":{"xref_id":"0015740"}}}


id: MONDO:0971141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"localized pleural mesothelioma","secondary_identifiers":["MEDGEN:1863756","Orphanet:675833","UMLS:C5925094"],"termid":"MONDO:0971141","xrefs":{"Monarch":{"xref_id":"0971141"}}}


id: PBO:0081461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 330","termid":"PBO:0081461"}


id: MONDO:0017089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A megalencephaly (disease) that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephaly","termid":"MONDO:0016608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated megalencephaly","secondary_identifiers":["GARD:20977","Orphanet:268920"],"synonyms":[{"name":"isolated macrencephaly","type":"exact"},{"name":"isolated megalencephaly (disease)","type":"exact"},{"name":"nonsyndromic megalencephaly (disease)","type":"exact"}],"termid":"MONDO:0017089","xrefs":{"Monarch":{"xref_id":"0017089"}}}


id: PBO:0028487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body_during_interphase","termid":"PBO:0028487"}


id: PBO:0081586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 513","termid":"PBO:0081586"}


id: GO:0010086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryonic root are generated and organized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic root morphogenesis","termid":"GO:0010086"}


id: GO:0060578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of superior vena cava generated and organized. The superior vena cava is a blood vessel that transports blood from the upper body to the heart.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior vena cava morphogenesis","termid":"GO:0060578"}


id: PBO:0040751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase 2, pseudogene 1","termid":"PBO:0040751"}


id: GO:1904659
data:
  {"annotated_genes":["SJAG_03608","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110395,113917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[116953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"}]},"cv_name":"biological_process","definition":"The process in which D-glucose is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:9090050","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"D-glucose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015758"],"synonyms":[{"name":"glucose transmembrane transport","type":"exact"},{"name":"glucose transport","type":"related"}],"termid":"GO:1904659","terms_by_termid":{"GO:0046323":null,"GO:0098708":null}}


id: MOD:01544
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01544"}


id: GO:0033417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CUU codon-amino acid adaptor activity","synonyms":[{"name":"CTT codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033417"}


id: GO:0007141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process comprising the steps by which a cell progresses through male meiosis I, the first meiotic division in the male germline.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I","termid":"GO:0007127"},{"relation_name":"is_a","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"male meiosis I","synonyms":[{"name":"male meiosis I nuclear division","type":"exact"}],"termid":"GO:0007141"}


id: PBO:0001834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family protein Eta2","termid":"PBO:0001834"}


id: PBO:0083842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exocyst subunit with dual roles in exocytosis and spliceosome assembly; subunit of the the exocyst complex which mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane (PM) prior to SNARE-mediated fusion; required for exocyst assembly and targeting the complex to specific sites on the bud tip PM; associates the U1 snRNP; role in pre-mRNA splicing and prespliceosome formation; possible Cdc28 substrate","termid":"PBO:0083842"}


id: PBO:0069204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 458, pseudogene","termid":"PBO:0069204"}


id: PBO:0066411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reelin","termid":"PBO:0066411"}


id: GO:0016858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Racemase and epimerase activity on compounds other than amino acids, hydroxy acids, carbohydrates or their derivatives.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete racemase and epimerase activity, acting on other compounds (obsolete GO:0016858)","synonyms":[{"name":"racemase and epimerase activity, acting on other compounds","type":"exact"}],"termid":"GO:0016858"}


id: PBO:0048964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein A33","termid":"PBO:0048964"}


id: MONDO:0002576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal rhabdomyosarcoma that arises from the extrahepatic bile ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct rhabdomyosarcoma","termid":"MONDO:0002577"},{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma","termid":"MONDO:0009993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"embryonal extrahepatic bile duct rhabdomyosarcoma","secondary_identifiers":["UMLS:C1333505","DOID:3253","NCIT:C5847","MEDGEN:234244"],"synonyms":[{"name":"embryonal extrahepatic bile duct rhabdomyosarcoma","type":"exact"},{"name":"embryonal rhabdomyosarcoma (disease) of extrahepatic bile duct","type":"exact"},{"name":"embryonal rhabdomyosarcoma of extrahepatic bile duct","type":"exact"},{"name":"embryonal rhabdomyosarcoma of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct embryonal rhabdomyosarcoma","type":"exact"},{"name":"extrahepatic bile duct embryonal rhabdomyosarcoma (disease)","type":"exact"}],"termid":"MONDO:0002576","xrefs":{"Monarch":{"xref_id":"0002576"}}}


id: GO:0010114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:sm","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to red light","synonyms":[{"name":"response to red light stimulus","type":"exact"}],"termid":"GO:0010114"}


id: MONDO:0013997
data:
  {"annotated_genes":["SJAG_03249"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86812],"is_not":false,"summary":null,"term":"MONDO:0013997"}]},"cv_name":"mondo","definition":"Focal facial dermal dysplasia type IV (FFDD4) is a rare focal facial dysplasia (FFDD), characterized by congenital isolated preauricular and/or cheek blister scar-like lesions.","definition_xrefs":["Orphanet:398189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal facial dermal dysplasia","termid":"MONDO:0018363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal facial dermal dysplasia type IV","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17650","UMLS:C3554246","OMIM:614974","MEDGEN:767160"],"synonyms":[{"name":"FFDD type IV","type":"exact"},{"name":"FFDD4","type":"exact"},{"name":"focal Facial dermal dysplasia type 4","type":"exact"},{"name":"focal facial dermal dysplasia 4","type":"exact"},{"name":"focal facial preauricular dysplasia","type":"exact"}],"termid":"MONDO:0013997","terms_by_termid":{"MONDO:0013997":null},"xrefs":{"Monarch":{"xref_id":"0013997"}}}


id: GO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8 S rRNA, 2S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000474"}


id: PBO:0060582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 19","termid":"PBO:0060582"}


id: MONDO:0013300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Greatly exaggerated width of the mouth, resulting from failure of union of the maxillary and mandibular processes, with extension of the oral orifice toward the ear. The defect may be unilateral or bilateral. (Dorland, 27th ed)","definition_xrefs":["MESH:D008265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"commissural facial cleft","secondary_identifiers":["OMIM:613545","Orphanet:141276","icd11.foundation:1460924303","MEDGEN:462142","UMLS:C3150792","SCTID:40159009","ICD9:744.83","GARD:16975"],"synonyms":[{"name":"commissural cleft, isolated","type":"related"},{"name":"lateral cleft, isolated","type":"related"},{"name":"macrostomia","type":"exact"},{"name":"macrostomia, isolated","type":"related"},{"name":"transverse cleft, isolated","type":"related"}],"termid":"MONDO:0013300","xrefs":{"Monarch":{"xref_id":"0013300"}}}


id: GO:0031010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any nuclear protein complex that contains an ATPase subunit of the imitation switch (ISWI) family. ISWI ATPases are involved in assembling chromatin and in sliding and spacing nucleosomes to regulate transcription of nuclear RNA polymerases I, II, and III and also DNA replication, recombination and repair.","definition_xrefs":["PMID:15284901","GOC:mah","PMID:16568949","PMID:21810179","PMID:15020051","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"ISWI-type complex","termid":"GO:0031010"}


id: PBO:0073098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 2","termid":"PBO:0073098"}


id: FYPO:0005021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the actomyosin contractile ring for a shorter time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of protein localization to cell division site","termid":"FYPO:0002528"},{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of protein localization to actomyosin contractile ring","synonyms":[{"name":"decreased duration of protein localisation to actomyosin contractile ring","type":"exact"},{"name":"decreased duration of protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"decreased duration of protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"decreased duration of protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"decreased duration of protein localization to cytokinetic contractile ring","type":"exact"},{"name":"decreased duration of protein localization to mitotic contractile ring","type":"exact"},{"name":"decreased duration of protein recruitment to actomyosin contractile ring","type":"related"},{"name":"reduced duration of protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0005021"}


id: PBO:0043047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHORDC1 pseudogene 4","termid":"PBO:0043047"}


id: MOD:00074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to N-methyl-L-phenylalanine.","definition_xrefs":["PubMed:2577730","PubMed:413571","RESID:AA0065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated phenylalanine","termid":"MOD:01063"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-phenylalanine","synonyms":[{"name":"(2S)-2-methylamino-3-phenylpropanoic acid","type":"exact"},{"name":"MOD_RES N-methylphenylalanine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-phenylalanine","type":"exact"},{"name":"N-methylated L-phenylalanine","type":"exact"},{"name":"N-methylphenylalanine","type":"exact"},{"name":"NMe1Phe","type":"exact"}],"termid":"MOD:00074"}


id: GO:0019239
data:
  {"annotated_genes":["SJAG_03771","SJAG_00107","SJAG_04123","SJAG_01673","SJAG_01997","SJAG_04380","SJAG_04189","SJAG_01054","SJAG_00352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79027],"is_not":false,"summary":null,"term":"GO:0019239"},{"annotations":[76078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"},{"annotations":[69543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004126"},{"annotations":[69703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004132"},{"annotations":[116915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008835"},{"annotations":[78774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008892"},{"annotations":[100869,73511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[71308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of an amino group from a substrate, producing a substituted or nonsubstituted ammonia (NH3/NH2R).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00352":null,"SJAG_01054":null,"SJAG_01673":null,"SJAG_01997":null,"SJAG_03771":null,"SJAG_04123":null,"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"deaminase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9014641","Reactome:R-HSA-9734745","Reactome:R-HSA-9754964","Reactome:R-HSA-74241"],"termid":"GO:0019239","terms_by_termid":{"GO:0003876":null,"GO:0004126":null,"GO:0004132":null,"GO:0008835":null,"GO:0008892":null,"GO:0019239":null,"GO:0043829":null,"GO:0052717":null}}


id: PBO:0054716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2125","termid":"PBO:0054716"}


id: PBO:0080619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 55","termid":"PBO:0080619"}


id: GO:0002272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature plasmacytoid dendritic cell acquires the specialized features of a mature plasmacytoid dendritic cell contributing to an immune response.","definition_xrefs":["PMID:15990333","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmacytoid dendritic cell activation involved in immune response","termid":"GO:0002271"},{"relation_name":"is_a","term_name":"plasmacytoid dendritic cell differentiation","termid":"GO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmacytoid dendritic cell differentiation involved in immune response","synonyms":[{"name":"plasmacytoid dendritic cell differentiation during immune response","type":"related"}],"termid":"GO:0002272"}


id: MONDO:0007219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brachymesophalangy with mesomelic short limbs, and carpal and tarsal bone abnormalities. In general, the affected individuals are of slightly short stature and normal intelligence. The syndrome has been described in a kindred with seven affected members from three generations. Transmission appears to be autosomal dominant.","definition_xrefs":["Orphanet:93382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Osebold-Remondini syndrome","secondary_identifiers":["SCTID:715722003","GARD:983","MESH:C537092","UMLS:C1862130","MEDGEN:350598","OMIM:112910","DOID:0110968"],"synonyms":[{"name":"BDA6","type":"exact"},{"name":"Brachymesophalangy with mesomelic short limbs and carpal and tarsal osseous abnormalities","type":"related"},{"name":"OSEBOLD-Remondini syndrome","type":"related"},{"name":"Osebold-Remondini syndrome","type":"exact"},{"name":"brachydactyly type A6","type":"exact"},{"name":"brachydactyly, type A6","type":"exact"},{"name":"brachymesophalangy with mesomelic short limbs and carpal and tarsal osseous abnormalities","type":"exact"}],"termid":"MONDO:0007219","xrefs":{"Monarch":{"xref_id":"0007219"}}}


id: GO:0034028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole + ATP + bicarbonate = 5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole + ADP + 3 H+ + phosphate.","definition_xrefs":["EC:6.3.4.18","RHEA:19317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-(carboxyamino)imidazole ribonucleotide synthase activity","secondary_identifiers":["KEGG_REACTION:R07404","MetaCyc:RXN0-742"],"synonyms":[{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole:carbon-dioxide ligase (ADP-forming) activity","type":"related"},{"name":"N5-CAIR synthetase activity","type":"related"},{"name":"N5-carboxyaminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"PurK","type":"related"}],"termid":"GO:0034028"}


id: MONDO:0011350
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85324,85325],"is_not":false,"summary":null,"term":"MONDO:0011350"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYH9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9726","MEDGEN:350942","UMLS:C1863659","OMIM:603622","DOID:0110548"],"synonyms":[{"name":"DFNA17","type":"narrow"},{"name":"MYH9 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 17","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 17","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYH9","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 17","type":"narrow"},{"name":"cochleosaccular degeneration","type":"related"},{"name":"deafness, autosomal dominant 17","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 17","type":"narrow"},{"name":"deafness, autosomal dominant type 17","type":"narrow"},{"name":"late-onset progressive hereditary hearing impairment due to cochleosaccular degeneration","type":"related"},{"name":"nonsyndromic hereditary deafness DFNA17","type":"narrow"}],"termid":"MONDO:0011350","terms_by_termid":{"MONDO:0011350":null},"xrefs":{"Monarch":{"xref_id":"0011350"}}}


id: PBO:0048859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 4","termid":"PBO:0048859"}


id: MONDO:1010463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mitral valve stenosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve stenosis, non-human animal","termid":"MONDO:1010016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve stenosis, domestic cat","secondary_identifiers":["OMIA:000655-9685"],"termid":"MONDO:1010463","xrefs":{"Monarch":{"xref_id":"1010463"}}}


id: PBO:0058196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4489","termid":"PBO:0058196"}


id: PBO:0087406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase; assists Cdc48p in the dislocation of misfolded, polyubiquitinated ERAD substrates that are subsequently delivered to the proteasome for degradation; also involved in the regulated destruction of resident ER membrane proteins, such as HMG-CoA reductase (Hmg1/2p) and cytoplasmic proteins (Fbp1p); role in mobilizing membrane bound transcription factors by regulated ubiquitin/proteasome-dependent processing (RUP)","termid":"PBO:0087406"}


id: PBO:0045851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 41","termid":"PBO:0045851"}


id: PBO:0057788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3115","termid":"PBO:0057788"}


id: GO:1905230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a borneol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:26593909","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to borneol","termid":"GO:1905230"}


id: GO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the lectin pathway of complement activation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation","termid":"GO:0030449"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"complement activation, lectin pathway","termid":"GO:0001867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement activation, lectin pathway","synonyms":[{"name":"regulation of complement cascade, lectin pathway","type":"exact"}],"termid":"GO:0001868"}


id: MONDO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epilepsy, familial focal, with variable foci (obsolete MONDO:0000215)","termid":"MONDO:0000215","xrefs":{"Monarch":{"xref_id":"0000215"}}}


id: PBO:0068786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 23, pseudogene","termid":"PBO:0068786"}


id: PBO:0083103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase encoded within the telomeric Y' element; Y' -helicase protein 1","termid":"PBO:0083103"}


id: PBO:0026772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_uracil_import","termid":"PBO:0026772"}


id: MONDO:0002992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile xanthogranuloma (obsolete MONDO:0002992)","termid":"MONDO:0002992","xrefs":{"Monarch":{"xref_id":"0002992"}}}


id: PBO:0044961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 7","termid":"PBO:0044961"}


id: MONDO:0035369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MTHFS-related developmental delay-microcephaly-short stature-epilepsy syndrome (obsolete MONDO:0035369)","termid":"MONDO:0035369","xrefs":{"Monarch":{"xref_id":"0035369"}}}


id: FYECO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which valproic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ valproic acid","synonyms":[{"name":"valproic acid added","type":"exact"}],"termid":"FYECO:0000413"}


id: GO:0018954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentaerythritol tetranitrate, C(CH2-O-NO2)4, a substance produced for use as an explosive and a vasodilator.","definition_xrefs":["UM-BBD_pathwayID:petn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentaerythritol tetranitrate metabolic process","synonyms":[{"name":"pentaerythritol tetranitrate metabolism","type":"exact"}],"termid":"GO:0018954"}


id: GO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vinculin-containing myofibril attachment structure of striated muscle that connects sarcomeres to the extracellular matrix. In nematode body wall muscle, the dense body performs the dual role of Z-disk and costamere.","definition_xrefs":["GOC:kmv","PMID:17492481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"striated muscle dense body","termid":"GO:0055120"}


id: PBO:0089161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex","termid":"PBO:0089161"}


id: MONDO:1011931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upper airway syndrome, non-human animal","secondary_identifiers":["OMIA:001893"],"termid":"MONDO:1011931","xrefs":{"Monarch":{"xref_id":"1011931"}}}


id: MONDO:0018721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare combined vascular malformation (obsolete MONDO:0018721)","secondary_identifiers":["Orphanet:458837"],"termid":"MONDO:0018721","xrefs":{"Monarch":{"xref_id":"0018721"}}}


id: PBO:0031164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamine_import","termid":"PBO:0031164"}


id: MONDO:0009561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-mannosidosis is an inherited lysosomal storage disorder characterized by immune deficiency, facial and skeletal abnormalities, hearing impairment, and intellectual deficit.","definition_xrefs":["Orphanet:61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0037792","MONDO:0005328"],"is_obsolete":false,"name":"alpha-mannosidosis","secondary_identifiers":["GARD:6968","OMIM:248500","MESH:D008363","ICD9:271.8","NANDO:1200126","UMLS:C0024748","NORD:755","MEDGEN:7467","SCTID:65524005","icd11.foundation:1944256516","NCIT:C84548","DOID:3413"],"synonyms":[{"name":"Alpha mannosidase B deficiency","type":"related"},{"name":"Alpha-D-mannosidosis","type":"exact"},{"name":"Alpha-mannosidase B deficiency","type":"related"},{"name":"MANSA","type":"related"},{"name":"alpha-mannosidase deficiency","type":"exact"},{"name":"alpha-mannosidosis","type":"exact"},{"name":"deficiency of alpha-mannosidase","type":"exact"},{"name":"lysosomal Alpha-D-mannosidase deficiency","type":"related"},{"name":"lysosomal alpha-D-mannosidase deficiency","type":"exact"},{"name":"mannosidosis, ALPHA B, lysosomal","type":"related"},{"name":"mannosidosis, alpha B lysosomal","type":"related"},{"name":"mannosidosis, alpha-, types I and II","type":"exact"}],"termid":"MONDO:0009561","xrefs":{"Monarch":{"xref_id":"0009561"}}}


id: FYPO:0001155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the changes that take place in growth medium, due to metabolism, secretion, etc. by a cell or population of cells, differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"altered effect on growth medium","synonyms":[{"name":"abnormal effect on growth medium","type":"exact"}],"termid":"FYPO:0001155"}


id: MONDO:1011831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal axonopathy, non-human animal","secondary_identifiers":["OMIA:000098"],"termid":"MONDO:1011831","xrefs":{"Monarch":{"xref_id":"1011831"}}}


id: GO:0016795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a phosphoric triester.","definition_xrefs":["EC:3.1.8.-","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric ester hydrolase activity","termid":"GO:0042578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"phosphoric triester hydrolase activity","termid":"GO:0016795"}


id: GO:1902445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of mitochondrial membrane permeability that is involved in programmed necrotic cell death.","definition_xrefs":["GOC:TermGenie","PMID:22493254","GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"part_of","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0007005"],"is_obsolete":false,"name":"regulation of mitochondrial membrane permeability involved in programmed necrotic cell death","synonyms":[{"name":"regulation of transport across mitochondrial membrane involved in programmed necrotic cell death","type":"exact"}],"termid":"GO:1902445"}


id: GO:0000028
data:
  {"annotated_genes":["SJAG_02184","SJAG_00513","SJAG_02803","SJAG_02870","SJAG_04918","SJAG_02749","SJAG_03617","SJAG_03424","SJAG_01296","SJAG_01548","SJAG_04256","SJAG_02340","SJAG_04524","SJAG_02479","SJAG_00572","SJAG_04998","SJAG_00523","SJAG_04746","SJAG_02335","SJAG_02477","SJAG_03798","SJAG_01169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69620,69805,71445,71748,72388,73052,73234,73321,74282,74387,74546,74553,74989,76357,76365,76868,76955,89694,94518,118349],"is_not":false,"summary":null,"term":"GO:0000028"},{"annotations":[72776,112814],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the small ribosomal subunit.","definition_xrefs":["GOC:jl","PMID:30467428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"ribosome assembly","termid":"GO:0042255"},{"relation_name":"part_of","term_name":"ribosomal small subunit biogenesis","termid":"GO:0042274"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00513":null,"SJAG_00523":null,"SJAG_00572":null,"SJAG_01169":null,"SJAG_01296":null,"SJAG_01548":null,"SJAG_02184":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02749":null,"SJAG_02803":null,"SJAG_02870":null,"SJAG_03424":null,"SJAG_03617":null,"SJAG_03798":null,"SJAG_04256":null,"SJAG_04524":null,"SJAG_04746":null,"SJAG_04918":null,"SJAG_04998":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"ribosomal small subunit assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"30S ribosomal subunit assembly","type":"narrow"},{"name":"40S ribosomal subunit assembly","type":"narrow"}],"termid":"GO:0000028","terms_by_termid":{"GO:0000028":null,"GO:0034462":null}}


id: GO:0106435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a carboxylic ester + H2O = a carboxylate + an alcohol + H+.","definition_xrefs":["RHEA:21164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"carboxylesterase activity","secondary_identifiers":["MetaCyc:CARBOXYLESTERASE-RXN","Reactome:R-HSA-9749647","EC:3.1.1.1","Reactome:R-HSA-9619024","Reactome:R-HSA-9727567"],"synonyms":[{"name":"B-esterase activity","type":"narrow"},{"name":"ali-esterase activity","type":"related"},{"name":"alpha-carboxylesterase activity","type":"narrow"},{"name":"cocaine esterase","type":"narrow"},{"name":"nonspecific carboxylesterase activity","type":"related"},{"name":"procaine esterase","type":"narrow"},{"name":"serine esterase activity","type":"narrow"},{"name":"triacetin esterase","type":"narrow"},{"name":"vitamin A esterase","type":"narrow"}],"termid":"GO:0106435"}


id: FYPO:0000246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population grows only in the presence of an antioxidant in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for antioxidant","synonyms":[{"name":"antioxidant required for cell population growth","type":"exact"},{"name":"antioxidant required for growth","type":"exact"},{"name":"antioxidant required for vegetative cell growth","type":"exact"},{"name":"growth defect, requires antioxidant for growth","type":"exact"}],"termid":"FYPO:0000246"}


id: GO:0034498
data:
  {"annotated_genes":["SJAG_04219","SJAG_02750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71192,114965],"is_not":false,"summary":null,"term":"GO:0034498"}]},"cv_name":"biological_process","definition":"The directed movement of substances from early endosomes to the Golgi.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02750":null,"SJAG_04219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"early endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PGE to Golgi transport","type":"exact"},{"name":"post-Golgi endosome to Golgi transport","type":"exact"}],"termid":"GO:0034498","terms_by_termid":{"GO:0034498":null}}


id: GO:0019307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose metabolic process","termid":"GO:0006013"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"mannose biosynthetic process","synonyms":[{"name":"mannose anabolism","type":"exact"},{"name":"mannose biosynthesis","type":"exact"},{"name":"mannose formation","type":"exact"},{"name":"mannose synthesis","type":"exact"}],"termid":"GO:0019307"}


id: MONDO:0018879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lichen planopilaris (LPP) is a rare cutaneous variant of lichen planus which affects hair follicles. It may occur on its own or in association with more common forms of lichen planus, usually classical type and/or oral lichen planus.","definition_xrefs":["Orphanet:525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lichen planopilaris","secondary_identifiers":["UMLS:C0023645","icd11.foundation:572258139","SCTID:64540004","GARD:3247","ICD10CM:L66.1","MESH:C535892","MEDGEN:44150"],"synonyms":[{"name":"Kossard disease","type":"related"},{"name":"LPP","type":"exact"},{"name":"follicular lichen planus","type":"exact"},{"name":"frontal fibrosing alopecia (subtype)","type":"related"},{"name":"lichen follicularis","type":"exact"},{"name":"lichen planopilaris classic type","type":"related"},{"name":"lichen planus follicularis","type":"exact"}],"termid":"MONDO:0018879","xrefs":{"Monarch":{"xref_id":"0018879"}}}


id: MONDO:0004677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial mycosis that is a superficial fungal infection of the skin characterized by brown to black macules which usually occur on the palmar aspects of hands and occasionally the plantar and other surfaces of the skin, caused by Hortaea werneckii, which is a common saprophytic fungus believed to occur in soil, compost, humus and on wood in humid tropical and sub-tropical regions.","definition_xrefs":["DOID:8912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superficial mycosis","termid":"MONDO:0024268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tinea nigra","secondary_identifiers":["ICD9:111.1","UMLS:C0152067","icd11.foundation:1723085409","SCTID:183342005","ICD10CM:B36.1","MEDGEN:508865"],"synonyms":[{"name":"Tinea palmaris nigra","type":"exact"},{"name":"infection by Cladosporium werneckii","type":"exact"},{"name":"keratomycosis nigricans","type":"exact"},{"name":"microsporosis nigra","type":"related"}],"termid":"MONDO:0004677","xrefs":{"Monarch":{"xref_id":"0004677"}}}


id: MONDO:1010294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rheumatoid arthritis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid arthritis, non-human animal","secondary_identifiers":["OMIA:000067"],"termid":"MONDO:1010294","xrefs":{"Monarch":{"xref_id":"1010294"}}}


id: FYPO:0006216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which establishment of actomyosin contractile ring localization is normal (i.e. indistinguishable from wild type). Establishment of actomyosin contractile ring localization is the part of cytokinesis in which the actomyosin contractile ring is assembled in a specific location.","definition_xrefs":["GO:1903486","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal establishment of actomyosin contractile ring localization","synonyms":[{"name":"normal establishment of actomyosin contractile ring localisation","type":"exact"},{"name":"normal establishment of actomyosin contractile ring localization during mitotic cell cycle","type":"related"},{"name":"normal establishment of actomyosin contractile ring localization during vegetative growth","type":"exact"},{"name":"normal establishment of actomyosin contractile ring positioning","type":"exact"},{"name":"normal establishment of cytokinetic contractile ring localization","type":"exact"},{"name":"normal establishment of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"normal establishment of mitotic contractile ring localization","type":"exact"}],"termid":"FYPO:0006216"}


id: MONDO:0032880
data:
  {"annotated_genes":["SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86575],"is_not":false,"summary":null,"term":"MONDO:0032880"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 82","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231473","MEDGEN:1684694","OMIM:618721","DOID:0080715"],"synonyms":[{"name":"DEE82","type":"exact"},{"name":"EIEE82","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 82","type":"exact"},{"name":"Glutamate Oxaloacetate Transaminase, Mitochondrial, Deficiency of","type":"related"},{"name":"Got2 Deficiency","type":"related"},{"name":"developmental and epileptic encephalopathy 82","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 82","type":"exact"}],"termid":"MONDO:0032880","terms_by_termid":{"MONDO:0032880":null},"xrefs":{"Monarch":{"xref_id":"0032880"}}}


id: PBO:0088777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron responsive transcriptional regulator, peptidase family","termid":"PBO:0088777"}


id: PBO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, shugoshin, Sgo1","termid":"PBO:0003409"}


id: PBO:0085262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Permease identified in lager brewing yeast strain Weihenstephan Nr.34; also in RM11-1a, but not S288C; subject to nitrogen catabolite repression and post-translational control, cellular localization dependent on nitrogen source quality","termid":"PBO:0085262"}


id: GO:0055059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a neuroblast into two daughter cells with different developmental potentials.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric neuroblast division","termid":"GO:0055059"}


id: MONDO:0015382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cysts and fistulae of the face and oral cavity that involves the lower lip.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lip disorder","termid":"MONDO:0004748"},{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower lip fistula","secondary_identifiers":["GARD:19940","UMLS:C1274792","Orphanet:141064","icd11.foundation:230523092","MEDGEN:698113"],"synonyms":[{"name":"cysts and fistulae of the face and oral cavity of lower lip","type":"exact"},{"name":"lower lip cysts and fistulae of the face and oral cavity","type":"exact"}],"termid":"MONDO:0015382","xrefs":{"Monarch":{"xref_id":"0015382"}}}


id: PR:Q09917
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRP-like ion channel pkd2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.03","synonyms":[{"name":"Spom972h-pkd2","type":"exact"},{"name":"polycystic kidney disease-related ion channel 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09917"}


id: GO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urogenital system development","termid":"GO:0001655"}


id: MONDO:1011498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Enteropathy-associated T cell lymphoma that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, domestic cat","termid":"MONDO:1010949"},{"relation_name":"is_a","term_name":"enteropathy-associated T cell lymphoma, non-human animal","termid":"MONDO:1011442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enteropathy-associated T cell lymphoma, domestic cat","secondary_identifiers":["OMIA:002526-9685"],"termid":"MONDO:1011498","xrefs":{"Monarch":{"xref_id":"1011498"}}}


id: GO:0004698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Calcium-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein. This reaction is activated in the presence of diacylglycerol and calcium.","definition_xrefs":["PMID:34834162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diacylglycerol-dependent serine/threonine kinase activity","termid":"GO:0004697"},{"relation_name":"is_a","term_name":"calcium-dependent protein serine/threonine kinase activity","termid":"GO:0009931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0140096","GO:0016740","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"calcium,diacylglycerol-dependent serine/threonine kinase activity","secondary_identifiers":["Reactome:R-HSA-8986937","Reactome:R-HSA-421007","Reactome:R-HSA-114683","Reactome:R-HSA-416639","Reactome:R-HSA-9005561","Reactome:R-HSA-114684"],"synonyms":[{"name":"calcium-dependent PKC activity","type":"exact"},{"name":"conventional protein kinase C activity","type":"exact"}],"termid":"GO:0004698"}


id: PBO:0005783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase beta subunit (predicted)","termid":"PBO:0005783"}


id: GO:0045142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA triple helix. The formation of triple helical DNA has been evoked in several cellular processes including transcription, replication, and recombination.","definition_xrefs":["PMID:10681538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"triplex DNA binding","termid":"GO:0045142"}


id: GO:0018086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["RESID:AA0191"],"gene_count":0,"genotype_count":0,"name":"obsolete alanine racemization (obsolete GO:0018086)","synonyms":[{"name":"alanine racemization","type":"exact"}],"termid":"GO:0018086"}


id: MONDO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the vulva and is composed of glandular epithelial cells. Representative examples include adenoma of the minor vestibular glands, Bartholin gland adenoma, and Bartholin gland adenocarcinoma.","definition_xrefs":["NCIT:C40292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar glandular neoplasm","secondary_identifiers":["DOID:2076","UMLS:C1520082","MEDGEN:276991"],"synonyms":[{"name":"mammalian vulva glandular cell neoplasm","type":"exact"},{"name":"vulvar glandular neoplasm","type":"exact"},{"name":"vulvar glandular tumor","type":"exact"},{"name":"vulvar glandular tumour","type":"exact"}],"termid":"MONDO:0002198","xrefs":{"Monarch":{"xref_id":"0002198"}}}


id: PR:Q9P7P0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1718.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C1718.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.04","synonyms":[{"name":"Spom972h-SPBC1718.04","type":"exact"}],"termid":"PR:Q9P7P0"}


id: PBO:0049466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin E (MNS blood group)","termid":"PBO:0049466"}


id: GO:0060811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mRNA is transported to, or maintained in, a specific location within the oocyte and/or syncytial embryo that contributes to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in pattern specification process","termid":"GO:0060810"},{"relation_name":"part_of","term_name":"anterior/posterior axis specification","termid":"GO:0009948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"intracellular mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"intracellular mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060811"}


id: GO:0002934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"desmosome organization","termid":"GO:0002934"}


id: FYPO:0004219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H4-K20 methylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 methylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004219"}


id: GO:0052208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type IV secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via substance secreted by type IV secretion system involved in symbiotic interaction (obsolete GO:0052208)","synonyms":[{"name":"modification of morphology or physiology of other organism via substance secreted by type IV secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052208"}


id: PBO:0058648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6777","termid":"PBO:0058648"}


id: PBO:0079592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D3 pseudogene 4","termid":"PBO:0079592"}


id: PBO:0034492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biological_process","termid":"PBO:0034492"}


id: FYPO:0007616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diuron. Cells stop growing (and may die) at a concentration of diuron that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to diuron","synonyms":[{"name":"sensitive to 3-(3,4-dichlorophenyl)-1,1-dimethylurea","type":"exact"},{"name":"sensitive to DCMU","type":"exact"},{"name":"sensitive to diuron during mitotic cell cycle","type":"related"},{"name":"sensitive to diuron during vegetative growth","type":"exact"}],"termid":"FYPO:0007616"}


id: MONDO:0010301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thrombocythemia, X-linked (obsolete MONDO:0010301)","termid":"MONDO:0010301","xrefs":{"Monarch":{"xref_id":"0010301"}}}


id: MOD:00915
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-proline residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-proline residue","synonyms":[{"name":"ModPro","type":"exact"}],"termid":"MOD:00915"}


id: PBO:0031269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_assembly","termid":"PBO:0031269"}


id: PBO:0036150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_monomethylation_during_vegetative_growth","termid":"PBO:0036150"}


id: GO:0100065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates leucine import.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of leucine import by transcription from RNA polymerase II promoter (obsolete GO:0100065)","termid":"GO:0100065"}


id: PBO:0003337
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.36","termid":"PBO:0003337"}


id: PBO:0003870
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menkes/Wilson disease","termid":"PBO:0003870"}


id: RO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in","termid":"RO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality_of","termid":"RO:0000080"}


id: GO:0047610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetylsalicylate + H2O = acetate + H+ + salicylate.","definition_xrefs":["RHEA:11752","EC:3.1.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0019213","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetylsalicylate deacetylase activity","secondary_identifiers":["MetaCyc:ACETYLSALICYLATE-DEACETYLASE-RXN","KEGG_REACTION:R02942"],"synonyms":[{"name":"acetylsalicylate O-acetylhydrolase activity","type":"related"},{"name":"acetylsalicylic acid esterase activity","type":"related"},{"name":"aspirin esterase activity","type":"related"},{"name":"aspirin hydrolase activity","type":"related"}],"termid":"GO:0047610"}


id: RO:HOM0000050
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves genes from different species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_between-species_paralogy_relationship_with","synonyms":[{"name":"between-species paralogous to","type":"exact"}],"termid":"RO:HOM0000050"}


id: GO:0140964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of auxin within a cell.","definition_xrefs":["PMID:19506555","PMID:22314799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular auxin homeostasis","synonyms":[{"name":"auxin homeostasis","type":"broad"},{"name":"cellular auxin homeostasis","type":"exact"}],"termid":"GO:0140964"}


id: GO:0030172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to troponin C, the calcium-binding subunit of the troponin complex.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"troponin C binding","termid":"GO:0030172"}


id: SO:0001981
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An orientation dependent regulatory promoter element, with consensus sequence of TTGCACAN4TTGCACA, found in plants.","definition_xrefs":["PMID:17381552","SO:ml","PMID:2902624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L_box","synonyms":[{"name":"L-box","type":"exact"},{"name":"L-box promoter element","type":"exact"}],"termid":"SO:0001981"}


id: GO:1902737
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, membranous protrusion found primarily on dendritic stretches of developing neurons. May receive synaptic input, and can develop into dendritic spines.","definition_xrefs":["GO_REF:0000064","GOC:TermGenie","GOC:PARL","GOC:pad","Wikipedia:Dendritic_filopodia","PMID:24464040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filopodium","termid":"GO:0030175"},{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic filopodium","synonyms":[{"name":"dendrite filopodium","type":"exact"}],"termid":"GO:1902737"}


id: PBO:0078026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 16","termid":"PBO:0078026"}


id: PBO:0003891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 Cyt1 (predicted)","termid":"PBO:0003891"}


id: PBO:0062018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 9 pseudogene","termid":"PBO:0062018"}


id: FYPO:0005696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from the interphase microtubule organizing center does not occur. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cytoplasmic interphase microtubule nucleation","termid":"FYPO:0004766"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished cytoplasmic microtubule nucleation from iMTOC","synonyms":[{"name":"abolished cytoplasmic interphase microtubule nucleation from iMTOC","type":"exact"},{"name":"abolished cytoplasmic microtubule nucleation from iMTOC during mitotic interphase","type":"exact"},{"name":"abolished interphase cytoplasmic microtubule nucleation from iMTOC","type":"exact"},{"name":"abolished interphase microtubule nucleation from iMTOC during mitotic cell cycle","type":"exact"},{"name":"abolished interphase microtubule nucleation from iMTOC during vegetative growth","type":"exact"},{"name":"abolished microtubule nucleation from interphase microtubule organizing center","type":"exact"},{"name":"abolished microtubule nucleation from interphase microtubule organizing centre","type":"exact"},{"name":"cytoplasmic microtubule nucleation from iMTOC abolished","type":"exact"}],"termid":"FYPO:0005696"}


id: PBO:0077586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymopoietin","termid":"PBO:0077586"}


id: PR:Q8NKC1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.04c gene.","definition_xrefs":["UniProtKB:Q8NKC1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol O-methyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.04c","synonyms":[{"name":"Spom972h-SPBPB21E7.04c","type":"exact"}],"termid":"PR:Q8NKC1"}


id: PBO:0069481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 748, pseudogene","termid":"PBO:0069481"}


id: SO:0001180
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-acting element found in the 3' UTR of some mRNA which is rich in AUUUA pentamers. Messenger RNAs bearing multiple AU-rich elements are often unstable.","definition_xrefs":["PMID:7892223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AU_rich_element","secondary_identifiers":["http://en.wikipedia.org/wiki/AU-rich_element"],"synonyms":[{"name":"ARE","type":"related"},{"name":"AU rich element","type":"exact"},{"name":"AU-rich element","type":"exact"}],"termid":"SO:0001180"}


id: PBO:0062763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Q member 1 pseudogene","termid":"PBO:0062763"}


id: GO:0071721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of thromboxanes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A thromboxane is any of a class of oxygenated oxane derivatives, originally derived from prostaglandin precursors in platelets, that stimulate aggregation of platelets and constriction of blood vessels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thromboxane transport","termid":"GO:0071717"},{"relation_name":"is_a","term_name":"sodium-independent icosanoid transport","termid":"GO:0071718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sodium-independent thromboxane transport","termid":"GO:0071721"}


id: MONDO:0011086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic T-B- severe combined immunodeficiency disorder due to null mutations in recombination activating gene (RAG) 1 and/or RAG2 resulting in less than 1% of wild type V(D)J recombination activity. Patients present with neonatal onset of life-threatening, severe, recurrent infections by opportunistic fungal, viral and bacterial micro-organisms, as well as skin rashes, chronic diarrhea, failure to thrive and fever. Immunologic observations include profound T- and B-cell lymphopenia, normal NK counts and low or absent serum immunoglobulins; some patients may have eosinophilia.","definition_xrefs":["Orphanet:331206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive","secondary_identifiers":["GARD:10339","MEDGEN:321935","MESH:C563311","DOID:0090013","OMIM:601457","UMLS:C1832322"],"synonyms":[{"name":"SCID due to complete RAG1-2 deficiency","type":"exact"},{"name":"SCID due to complete RAG1/2 deficiency","type":"exact"},{"name":"SCID, AR, T-cell negative, B-cell negative, NK cell-positive","type":"related"},{"name":"SCID, T cell-negative, B cell-negative, NK cell-positive","type":"related"},{"name":"severe combined immunodeficiency due to complete RAG1-2 deficiency","type":"exact"},{"name":"severe combined immunodeficiency due to complete RAG1/2 deficiency","type":"related"},{"name":"severe combined immunodeficiency, B cell-negative","type":"exact"},{"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive","type":"exact"},{"name":"severe immunodeficiency, autosomal recessive, T-cell negative, B-cell negative, NK cell-positive","type":"related"}],"termid":"MONDO:0011086","xrefs":{"Monarch":{"xref_id":"0011086"}}}


id: PBO:0029378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_G0","termid":"PBO:0029378"}


id: GO:0002946
data:
  {"annotated_genes":["SJAG_01314","SJAG_00325","SJAG_02099","SJAG_05249"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90220,105545],"is_not":false,"summary":null,"term":"GO:0002946"},{"annotations":[93690,88023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"}]},"cv_name":"biological_process","definition":"The process whereby a cytosine in a tRNA is methylated at position 5 of the cytosine.","definition_xrefs":["ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_01314":null,"SJAG_02099":null,"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA C5-cytosine methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA 5-methylcytosine biosynthesis","type":"related"}],"termid":"GO:0002946","terms_by_termid":{"GO:0002127":null,"GO:0002946":null}}


id: PBO:0034531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_nucleus_and_mitotic_cell_cycle_arrest_in_interphase_during_cellular_response_to_UV","termid":"PBO:0034531"}


id: PBO:0064350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLXNB3 antisense RNA 1","termid":"PBO:0064350"}


id: PBO:0055950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 58","termid":"PBO:0055950"}


id: PBO:0085491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prolyl hydroxylase; catalyzes oxygen-dependent dihydroxylation of Rps23a/b, a 40S ribosomal decoding center subunit; influences translational termination and regulates translational accuracy; interacts with Sup45p (eRF1), Sup35p (eRF3) and Pab1p; disputed role as a oxidative dealkylase repairing DNA methyl-base lesions; poly(rA)-binding protein affecting poly(A) tail length and mRNA stability; Fe(II)/2-oxoglutarate-dependent dioxygenase family member similar to human prolyl 4-hydroxylase OGFOD1","termid":"PBO:0085491"}


id: PBO:0056892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midline 2","termid":"PBO:0056892"}


id: PBO:0089373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc10","termid":"PBO:0089373"}


id: PBO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxymuconolactone decarboxylase-like protein, Pxp2","termid":"PBO:0089719"}


id: GO:0090491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalyzes the reaction: N-Hydroxy-L-tryptophan + Oxygen + NADPH + H+ = N,N-Dihydroxy-L-tryptophan + NADP+ + H2O.","definition_xrefs":["KEGG_REACTION:R09584"],"gene_count":0,"genotype_count":0,"name":"obsolete N-hydroxy-L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating) (obsolete GO:0090491)","termid":"GO:0090491"}


id: GO:0070475
data:
  {"annotated_genes":["SJAG_02024","SJAG_03877","SJAG_03008","SJAG_02281","SJAG_01958","SJAG_02417"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75521,77923,78457,78746,79278],"is_not":false,"summary":null,"term":"GO:0070475"},{"annotations":[79774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methylation","termid":"GO:0031167"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02417":null,"SJAG_03008":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"rRNA base methylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070475","terms_by_termid":{"GO:0070475":null,"GO:0070476":null}}


id: GO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma glycoprotein (obsolete GO:0005211)","synonyms":[{"name":"plasma glycoprotein","type":"exact"}],"termid":"GO:0005211"}


id: PBO:0029381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_4'-phosphopantothenate_level","termid":"PBO:0029381"}


id: PR:000050398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Thr-75 and Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75/Thr-78, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:23333317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut12/UnPhos(T75,T78)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"PomBase_original_PRO_term_name: spindle pole body-associated protein cut12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cut12/UnPhos:1","type":"exact"},{"name":"UniProtKB:O59755, Thr-75/Thr-78, PR:000026291","type":"narrow"},{"name":"cut12/UnPhos(T75,T78)","type":"exact"}],"termid":"PR:000050398"}


id: PBO:0113334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may contain a lipid attachment site; localizes to cytosol, and to peroxisomes in oleate-growing cells; YMR158C-A is not an essential gene","termid":"PBO:0113334"}


id: GO:0046704
data:
  {"annotated_genes":["SJAG_00779","SJAG_00885","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92200,107012],"is_not":false,"summary":null,"term":"GO:0046704"},{"annotations":[80200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CDP, cytidine (5'-)diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"CDP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CDP metabolism","type":"exact"}],"termid":"GO:0046704","terms_by_termid":{"GO:0046704":null,"GO:0046705":null}}


id: PBO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II Gls2","termid":"PBO:0001185"}


id: GO:0097754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane bending process mediated by clathrin.","definition_xrefs":["GOC:pr","Wikipedia:Membrane_curvature"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane bending","termid":"GO:0097753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"clathrin-mediated membrane bending","termid":"GO:0097754"}


id: PBO:0049943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIC ZBTB transcriptional repressor 1","termid":"PBO:0049943"}


id: PBO:0028817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_single-stranded_DNA_5'-3'_exodeoxyribonuclease_activity","termid":"PBO:0028817"}


id: PBO:0068684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 65, pseudogene","termid":"PBO:0068684"}


id: MONDO:0957433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary pulmonary vein stenosis","secondary_identifiers":["MEDGEN:539576","Orphanet:642071","UMLS:C0265915"],"termid":"MONDO:0957433","xrefs":{"Monarch":{"xref_id":"0957433"}}}


id: GO:0010995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which free ubiquitin chains, compounds composed of a large number of ubiquitin monomers, are broken down.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"part_of","term_name":"ubiquitin recycling","termid":"GO:0010992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"free ubiquitin chain depolymerization","termid":"GO:0010995"}


id: GO:0015850
data:
  {"annotated_genes":["SJAG_02962","SJAG_00671","SJAG_04506","SJAG_01590","SJAG_03808","SJAG_03595","SJAG_03718","SJAG_01722","SJAG_02375","SJAG_01407","SJAG_00261","SJAG_00355","SJAG_01329","SJAG_02152","SJAG_03652","SJAG_02323"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[62161,71780,76939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"},{"annotations":[88172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"},{"annotations":[72719,71898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"},{"annotations":[118490,89901,89902,117212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[89903,118491,89904,117213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[118492,89905,89906,117214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"},{"annotations":[109116,115964,107959,94009,111078,102365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015918"}]},"cv_name":"biological_process","definition":"The directed movement of an organic hydroxy compound (organic alcohol) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. An organic hydroxy compound is an organic compound having at least one hydroxy group attached to a carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00355":null,"SJAG_00671":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02152":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02962":null,"SJAG_03595":null,"SJAG_03652":null,"SJAG_03718":null,"SJAG_03808":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"organic hydroxy compound transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"organic alcohol transport","type":"exact"}],"termid":"GO:0015850","terms_by_termid":{"GO:0015918":null,"GO:0032366":null,"GO:0120011":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1904679":null,"GO:1990556":null}}


id: PBO:0017584
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RTS1","termid":"PBO:0017584"}


id: PBO:0057953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3677","termid":"PBO:0057953"}


id: PBO:0047467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 6 pseudogene 1","termid":"PBO:0047467"}


id: PBO:0065848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11B antisense RNA 1","termid":"PBO:0065848"}


id: PBO:0067758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 57","termid":"PBO:0067758"}


id: GO:0071943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that consists of a heterodimer of the bHLH-ZIP proteins Myc and Max.","definition_xrefs":["PMID:16620027","PMID:20170194","PMID:16620031","GOC:cna"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Myc-Max complex","termid":"GO:0071943"}


id: PBO:0054379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1775","termid":"PBO:0054379"}


id: MONDO:0007614
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular motility disease","termid":"MONDO:0001584"},{"relation_name":"is_a","term_name":"myopathy of extraocular muscle","termid":"MONDO:0004746"},{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital fibrosis of extraocular muscles","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080143","MEDGEN:724506","OMIMPS:135700","UMLS:C1302995","SCTID:400946004","icd11.foundation:887449084","NORD:997","GARD:12590","ICD9:728.2","Orphanet:45358"],"synonyms":[{"name":"CFEOM1","type":"related"},{"name":"Congenital Fibrosis of the Extraocular Muscles","type":"exact"},{"name":"FEOM","type":"exact"},{"name":"Feom1 locus","type":"related"},{"name":"Tukel syndrome","type":"narrow"},{"name":"blepharoptosis with absent eye movements","type":"related"},{"name":"congenital fibrosis of the extraocular muscles","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital","type":"exact"},{"name":"fibrosis of extraocular muscles, congenital, 1","type":"related"},{"name":"fibrosis of extraocular muscles, congenital, 3B","type":"related"},{"name":"fibrosis of extraocular muscles, congenital, type 1","type":"exact"},{"name":"ophthalmoplegia, congenital","type":"related"}],"termid":"MONDO:0007614","terms_by_termid":{"MONDO:0010912":null},"xrefs":{"Monarch":{"xref_id":"0007614"}}}


id: PBO:0086554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL149W is not an essential gene","termid":"PBO:0086554"}


id: GO:0019409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The metabolic process in which ammonia (NH3) is oxidized to nitrite (NO2) in the presence of oxygen; enzymatic reactions convert ammonia to hydrazine, and hydrazine to nitrite.","definition_xrefs":["MetaCyc:AMMOXID-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"},{"relation_name":"is_a","term_name":"ammonia oxidation","termid":"GO:0019329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration, using ammonia as electron donor","synonyms":[{"name":"aerobic ammonia oxidation to nitrite via hydrazine","type":"exact"}],"termid":"GO:0019409"}


id: PBO:0082707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic19p is peripheral to the inner membrane and may connect Mic60p with the Mic10p-Mic12p-Mic27p subcomplex; both yeast and human Mic19p become oxidized, and oxidation may regulate MICOS","termid":"PBO:0082707"}


id: PBO:0053416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 354","termid":"PBO:0053416"}


id: PBO:0044600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 8","termid":"PBO:0044600"}


id: FYPO:0003214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to glucose starvation","synonyms":[{"name":"normal protein phosphorylation during cellular response to glucose depletion","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose deprivation","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose limitation","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0003214"}


id: GO:0008352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex possessing an activity that couples ATP hydrolysis to the severing of microtubules; usually a heterodimer comprising a catalytic subunit (often 60kDa) and a regulatory subunit (often 80 kDa).","definition_xrefs":["PMID:10910766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"part_of","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0032991","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"katanin complex","termid":"GO:0008352"}


id: GO:0071370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to gibberellin","termid":"GO:0009739"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gibberellin stimulus","synonyms":[{"name":"cellular response to gibberellic acid stimulus","type":"narrow"}],"termid":"GO:0071370"}


id: PBO:0045072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 4","termid":"PBO:0045072"}


id: GO:2000791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell proliferation involved in lung development.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell proliferation","termid":"GO:0072201"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000790"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell proliferation involved in lung development","termid":"GO:0060916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000791"}


id: PBO:0043903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein 3","termid":"PBO:0043903"}


id: GO:0005885
data:
  {"annotated_genes":["SJAG_01384","SJAG_04100","SJAG_03086","SJAG_02075","SJAG_01268","SJAG_02245","SJAG_01964"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74592,76308,77641,77936,78669,79516,79689],"is_not":false,"summary":null,"term":"GO:0005885"}]},"cv_name":"cellular_component","definition":"A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments.","definition_xrefs":["GOC:jl","GOC:vw","PMID:12479800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01268":null,"SJAG_01384":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02245":null,"SJAG_03086":null,"SJAG_04100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"Arp2/3 protein complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0005885","terms_by_termid":{"GO:0005885":null}}


id: PBO:0068606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 57, pseudogene","termid":"PBO:0068606"}


id: GO:0045250
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cytosolic complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA; comprises subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). Usually contains fewer subunits than its eukaryotic counterpart; for example, the E. coli complex contains 12 E1 dimers, 8 E2 trimers, and 6 E3 dimers arranged in highly symmetric cubic order.","definition_xrefs":["ISBN:0716720094","GOC:mtg_sensu","ISBN:0471331309"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic pyruvate dehydrogenase complex (obsolete GO:0045250)","synonyms":[{"name":"pyruvate dehydrogenase complex (lipoamide)","type":"related"}],"termid":"GO:0045250"}


id: PBO:0088890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine/serine/threonine phosphatase","termid":"PBO:0088890"}


id: GO:1901744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-deoxystreptamine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"2-deoxystreptamine metabolic process","termid":"GO:1901742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-deoxystreptamine biosynthetic process","synonyms":[{"name":"2-deoxystreptamine anabolism","type":"exact"},{"name":"2-deoxystreptamine biosynthesis","type":"exact"},{"name":"2-deoxystreptamine formation","type":"exact"},{"name":"2-deoxystreptamine synthesis","type":"exact"}],"termid":"GO:1901744"}


id: PBO:0085187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two mitochondrially-localized peptidyl-tRNA hydrolases; dispensable for respiratory growth on rich medium, but required for respiratory growth on minimal medium; see also PTH2","termid":"PBO:0085187"}


id: GO:0021641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the trochlear nerve. This process pertains to the physical shaping of a rudimentary structure. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GOC:dgh","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"trochlear nerve morphogenesis","termid":"GO:0021639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve structural organization","synonyms":[{"name":"CN IV structural organization","type":"related"},{"name":"trochlear nerve structural organisation","type":"exact"}],"termid":"GO:0021641"}


id: PATO:0000948
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having a sinus or rounded lobe at the base.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart shaped","synonyms":[{"name":"cordate","type":"exact"},{"name":"cordiform","type":"exact"}],"termid":"PATO:0000948"}


id: FYPO:0003465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is lower than normal during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased alpha,alpha-trehalase activity during cellular response to salt stress","synonyms":[{"name":"decreased neutral trehalase activity during cellular response to salt stress","type":"exact"},{"name":"decreased trehalase activity during cellular response to salt stress","type":"broad"},{"name":"reduced alpha,alpha-trehalase activity during cellular response to v","type":"exact"}],"termid":"FYPO:0003465"}


id: MONDO:0008086
data:
  {"annotated_genes":["SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86715],"is_not":false,"summary":null,"term":"MONDO:0008086"}]},"cv_name":"mondo","definition":"An axonal form of hereditary motor and sensory neuropathy distinguished by prominent early sensory loss and later positive sensory phenomena, caused by mutations in SPTLC1.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy type 1","termid":"MONDO:0018213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005244","MONDO:0002525"],"is_obsolete":false,"name":"neuropathy, hereditary sensory and autonomic, type 1A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:162400","MEDGEN:1716450","GARD:15095","UMLS:C5235211","DOID:0070152"],"synonyms":[{"name":"HSAN 1A","type":"related"},{"name":"HSAN1A","type":"exact"},{"name":"HSN 1A","type":"related"},{"name":"SPTLC1 hereditary sensory and autonomic neuropathy type 1","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 1 caused by mutation in SPTLC1","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 1A","type":"related"},{"name":"hereditary sensory and autonomic neuropathy type IA","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type IA","type":"related"},{"name":"neuropathy, hereditary sensory radicular, autosomal dominant, type 1A","type":"related"},{"name":"neuropathy, hereditary sensory, type 1A","type":"related"}],"termid":"MONDO:0008086","terms_by_termid":{"MONDO:0008086":null},"xrefs":{"Monarch":{"xref_id":"0008086"}}}


id: PBO:0072917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class B member 2","termid":"PBO:0072917"}


id: PBO:0072028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9 pseudogene 4","termid":"PBO:0072028"}


id: MONDO:0024564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Coats plus syndrome in which the cause of the disease is a mutation in the CTC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Coats plus syndrome","termid":"MONDO:0012815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"cerebroretinal microangiopathy with calcifications and cysts 1","secondary_identifiers":["MEDGEN:1636142","OMIM:612199","GARD:18441","UMLS:C4552029"],"synonyms":[{"name":"CRMCC1","type":"related"},{"name":"CTC1 Coats plus syndrome","type":"exact"},{"name":"Coats plus syndrome","type":"related"},{"name":"Coats plus syndrome caused by mutation in CTC1","type":"exact"},{"name":"Crmcc","type":"related"},{"name":"cerebroretinal microangiopathy with calcifications and cysts","type":"broad"},{"name":"cerebroretinal microangiopathy with calcifications and cysts 1","type":"exact"}],"termid":"MONDO:0024564","xrefs":{"Monarch":{"xref_id":"0024564"}}}


id: GO:0001319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein localization process in which progeny cells acquire, or are barred from acquiring, proteins that have been altered by reaction with reactive oxygen species in dividing aging cells.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete inheritance of oxidatively modified proteins involved in replicative cell aging (obsolete GO:0001319)","synonyms":[{"name":"inheritance of oxidatively modified proteins during replicative cell ageing","type":"related"},{"name":"inheritance of oxidatively modified proteins during replicative cell aging","type":"related"}],"termid":"GO:0001319"}


id: PBO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 69","termid":"PBO:0050366"}


id: MONDO:0033900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare capillary malformation with associated anomalies (obsolete MONDO:0033900)","termid":"MONDO:0033900","xrefs":{"Monarch":{"xref_id":"0033900"}}}


id: MONDO:1012106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"internal hydrocephalus, non-human animal","termid":"MONDO:1011843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal hydrocephalus, cattle","secondary_identifiers":["OMIA:000489-9913"],"termid":"MONDO:1012106","xrefs":{"Monarch":{"xref_id":"1012106"}}}


id: GO:0046482
data:
  {"annotated_genes":["SJAG_02408"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008153"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving para-aminobenzoic acid, an intermediate in the synthesis of folic acid, a compound which some organisms, e.g. prokaryotes, eukaryotic microbes, and plants, can synthesize de novo. Others, notably mammals, cannot. In yeast, it is present as a factor in the B complex of vitamins.","definition_xrefs":["PMID:11377864","PMID:11960743","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02408":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"para-aminobenzoic acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"4-aminobenzoic acid metabolic process","type":"exact"},{"name":"4-aminobenzoic acid metabolism","type":"exact"},{"name":"PABA metabolic process","type":"exact"},{"name":"PABA metabolism","type":"exact"},{"name":"p-aminobenzoic acid metabolic process","type":"exact"},{"name":"p-aminobenzoic acid metabolism","type":"exact"},{"name":"para-aminobenzoic acid metabolism","type":"exact"},{"name":"vitamin Bx metabolic process","type":"exact"},{"name":"vitamin Bx metabolism","type":"exact"}],"termid":"GO:0046482","terms_by_termid":{"GO:0008153":null}}


id: GO:0071889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 14-3-3 protein. A 14-3-3 protein is any of a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimers within all eukaryotic cells, and have been implicated in the modulation of distinct biological processes by binding to specific phosphorylated sites on diverse target proteins, thereby forcing conformational changes or influencing interactions between their targets and other molecules. Each 14-3-3 protein sequence can be roughly divided into three sections: a divergent amino terminus, the conserved core region and a divergent carboxy-terminus. The conserved middle core region of the 14-3-3s encodes an amphipathic groove that forms the main functional domain, a cradle for interacting with client proteins.","definition_xrefs":["GOC:cna","GOC:mah","PMID:15167810","PMID:19575580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"14-3-3 protein binding","termid":"GO:0071889"}


id: MOD:01958
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a two-iron two-sulfur cluster to bis-L-cysteinyl bisglutathion-S-yl diiron disulfide.","definition_xrefs":["RESID:AA0603","PubMed:17121859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"bis-L-cysteinyl bisglutathion-S-yl diiron disulfide","synonyms":[{"name":"bis-L-cysteinyl bisglutathion-S-yl diiron disulfide","type":"exact"},{"name":"di-mu-sulfido-bis(cysteinato)-1kappaS,2kappaS-bis(glutathionato)-1kappaS,2kappaS-diiron","type":"exact"},{"name":"mitochondrial glutaredoxin 2 dimer iron-sulfur cluster","type":"exact"},{"name":"plant glutaredoxin C1 dimer iron-sulfur cluster","type":"exact"}],"termid":"MOD:01958"}


id: GO:0015155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactose from one side of a membrane to the other. Lactose is a disaccharide 4-O-beta-D-galactopyranosyl-D-glucose, and constitutes roughly 5% of the milk in almost all mammals.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lactose transmembrane transporter activity","secondary_identifiers":["GO:0019189"],"synonyms":[{"name":"lactose permease activity","type":"exact"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"}],"termid":"GO:0015155"}


id: MONDO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival disorder","termid":"MONDO:0006170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival deposit","secondary_identifiers":["ICD9:372.56","UMLS:C0162280","MEDGEN:511536","SCTID:62660000","DOID:11653"],"termid":"MONDO:0001331","xrefs":{"Monarch":{"xref_id":"0001331"}}}


id: PBO:0043715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 3","termid":"PBO:0043715"}


id: PR:000041369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3-like centromeric protein cnp1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"},{"relation_name":"is_a","term_name":"histone H3-like centromeric protein cnp1","termid":"PR:000041443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-like centromeric protein cnp1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.17","synonyms":[{"name":"CENP-A homolog (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cnp1","type":"exact"},{"name":"centromere protein 1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000041369"}


id: PBO:0076558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 2","termid":"PBO:0076558"}


id: PBO:0079545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA6 divergent transcript","termid":"PBO:0079545"}


id: PBO:0028911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_horsetail_nucleus_morphology","termid":"PBO:0028911"}


id: GO:0036153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of triacylglycerol, through sequential deacylation and re-acylation reactions, to generate triacylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["PMID:15364929","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol acyl-chain remodeling","termid":"GO:0036155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride acyl-chain remodeling","synonyms":[{"name":"triacylglycerol acyl-chain remodeling","type":"exact"},{"name":"triglyceride acyl-chain remodelling","type":"exact"}],"termid":"GO:0036153"}


id: GO:0031401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein modification process","synonyms":[{"name":"activation of protein modification","type":"narrow"},{"name":"stimulation of protein modification","type":"narrow"},{"name":"up regulation of protein modification","type":"exact"},{"name":"up-regulation of protein modification","type":"exact"},{"name":"upregulation of protein modification","type":"exact"}],"termid":"GO:0031401"}


id: PBO:0081616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 544","termid":"PBO:0081616"}


id: PBO:0061668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 1","termid":"PBO:0061668"}


id: PBO:0109299
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding sequence mRNA is required to establish mad1+-like expression","termid":"PBO:0109299"}


id: MONDO:0015249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital heart defect characterized by the complete atresia of the mitral valve.","definition_xrefs":["NCIT:C98992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve disorder","termid":"MONDO:0003767"},{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"mitral atresia disorder","secondary_identifiers":["Orphanet:1205","icd11.foundation:6462604","UMLS:C0344760","MEDGEN:91035","ICD10CM:Q23.2","SCTID:23063005","HP:0011560","GARD:3685"],"synonyms":[{"name":"congenital atresia of mitral valve","type":"exact"},{"name":"congenital mitral valve atresia","type":"exact"},{"name":"mitral atresia","type":"exact"},{"name":"mitral valve atresia","type":"exact"}],"termid":"MONDO:0015249","xrefs":{"Monarch":{"xref_id":"0015249"}}}


id: PBO:0040922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer associated ESR1 regulating natural antisense transcript 1","termid":"PBO:0040922"}


id: GO:0047656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose + phosphate = D-glucose + beta-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.64","MetaCyc:ALPHAALPHA-TREHALOSE-PHOSPHORYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"alpha,alpha-trehalose phosphorylase activity","secondary_identifiers":["RHEA:23512"],"synonyms":[{"name":"a,a-trehalose phosphorylase activity","type":"exact"},{"name":"alpha,alpha-trehalose:phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"trehalose phosphorylase","type":"broad"}],"termid":"GO:0047656"}


id: PBO:0065455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 2 pseudogene 1","termid":"PBO:0065455"}


id: FYPO:0007143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-deoxyribonuclease (pyrimidine dimer) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0005447","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0007143"}


id: PBO:0028217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_chromosome_segregation,_with_binucleate_and_anucleate_compartment_formation_during_cellular_response_to_salt_stress","termid":"PBO:0028217"}


id: GO:0042130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte proliferation","termid":"GO:0050672"},{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"negatively_regulates","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T cell proliferation","synonyms":[{"name":"down regulation of T cell proliferation","type":"exact"},{"name":"down-regulation of T cell proliferation","type":"exact"},{"name":"downregulation of T cell proliferation","type":"exact"},{"name":"inhibition of T cell proliferation","type":"narrow"},{"name":"negative regulation of T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of T-cell proliferation","type":"exact"},{"name":"negative regulation of T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042130"}


id: PBO:0078958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-1","termid":"PBO:0078958"}


id: GO:1902838
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear migration along microtubule.","definition_xrefs":["GO_REF:0000058","PMID:23087209","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle transport along microtubule","termid":"GO:1902513"},{"relation_name":"regulates","term_name":"nuclear migration along microtubule","termid":"GO:0030473"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of nuclear migration along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"regulation of nuclear movement, microtubule-mediated","type":"broad"},{"name":"regulation of nucleus migration","type":"broad"},{"name":"regulation of transport of nucleus by microtubules","type":"exact"},{"name":"regulation of transport of nucleus, microtubule-mediated","type":"exact"}],"termid":"GO:1902838","terms_by_termid":{"GO:1902854":null}}


id: MONDO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the placenta.","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"},{"relation_name":"is_a","term_name":"placenta neoplasm","termid":"MONDO:0021218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"placenta cancer","secondary_identifiers":["ICD9:181","MEDGEN:56310","NCIT:C3555","SCTID:126920004","UMLS:C0153572","DOID:2021","ICD9:239.5"],"synonyms":[{"name":"cancer of placenta","type":"exact"},{"name":"deciduoma, malignant","type":"exact"},{"name":"malignant neoplasm of placenta","type":"exact"},{"name":"malignant neoplasm of the placenta","type":"exact"},{"name":"malignant placenta neoplasm","type":"exact"},{"name":"malignant placenta tumor","type":"exact"},{"name":"malignant placenta tumour","type":"exact"},{"name":"malignant placental neoplasm","type":"exact"},{"name":"malignant placental tumor","type":"exact"},{"name":"malignant placental tumour","type":"exact"},{"name":"malignant tumor of placenta","type":"exact"},{"name":"malignant tumor of the placenta","type":"exact"},{"name":"malignant tumour of placenta","type":"exact"},{"name":"malignant tumour of the placenta","type":"exact"},{"name":"placenta cancer","type":"exact"},{"name":"placental cancer","type":"exact"},{"name":"placental tumors","type":"broad"},{"name":"placental tumours","type":"broad"},{"name":"primary malignant neoplasm of placenta","type":"exact"}],"termid":"MONDO:0002178","xrefs":{"Monarch":{"xref_id":"0002178"}}}


id: PBO:0039088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin II receptor type 2","termid":"PBO:0039088"}


id: PBO:0045629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 41 (pseudogene)","termid":"PBO:0045629"}


id: GO:0048483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands.","definition_xrefs":["FMA:9905","GOC:sr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autonomic nervous system development","termid":"GO:0048483"}


id: PBO:0056675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2A","termid":"PBO:0056675"}


id: SO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded, circular RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"double_stranded_RNA_chromosome","termid":"SO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_double_stranded_RNA_chromosome","synonyms":[{"name":"circular double stranded RNA chromosome","type":"exact"}],"termid":"SO:0000967"}


id: MONDO:0017909
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[85984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"}]},"cv_name":"mondo","definition":"Glutathione synthetase deficiency is characterized by hemolytic anemia, associated with metabolic acidosis and 5-oxoprolinuria in moderate forms, and with progressive neurological symptoms and recurrent bacterial infections in the most severe forms.","definition_xrefs":["Orphanet:32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019241"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005066","MONDO:0019241"],"is_obsolete":false,"name":"inherited glutathione synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:234589002","GARD:10047","NCIT:C128193","DOID:0080699","MESH:C536835"],"synonyms":[{"name":"5-oxoprolinuria","type":"exact"},{"name":"GSSD","type":"exact"},{"name":"glutathione synthetase deficiency","type":"exact"},{"name":"inborn error of glutathione synthase activity","type":"exact"},{"name":"inborn glutathione synthase activity disorder","type":"exact"},{"name":"inherited glutathione synthetase deficiency","type":"exact"},{"name":"oxoprolinase deficiency","type":"related"},{"name":"pyroglutamic aciduria","type":"exact"},{"name":"pyroglutamicaciduria","type":"exact"},{"name":"rare inborn error of glutathione synthase activity","type":"exact"}],"termid":"MONDO:0017909","terms_by_termid":{"MONDO:0009284":null,"MONDO:0009947":null},"xrefs":{"Monarch":{"xref_id":"0017909"}}}


id: GO:0097418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Intracellular mass of paired, helically wound protein filaments (also called PHF) lying in the cytoplasm of neuronal cell bodies and neuritic cell processes. Neurofibrillary tangles contain an abnormally phosphorylated form of a microtubule-associated protein, tau. The shape of these inclusions may resemble a flame or a star.","definition_xrefs":["NIF_Subcellular:sao2409833926","NIF_Subcellular:nlx_subcell_20090201","NIF_Subcellular:nlx_subcell_20090202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neurofibrillary tangle","synonyms":[{"name":"flame-shaped neurofibrillary tangle","type":"narrow"},{"name":"star-shaped neurofibrillary tangle","type":"narrow"}],"termid":"GO:0097418"}


id: PBO:0052973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL histone methyl-lysine binding protein 3","termid":"PBO:0052973"}


id: PBO:0055856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 4","termid":"PBO:0055856"}


id: GO:1904821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a chloroplast into its constituent components.","definition_xrefs":["PMID:26494759","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast organization","termid":"GO:0009658"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast disassembly","synonyms":[{"name":"chloroplast degradation","type":"related"}],"termid":"GO:1904821"}


id: GO:0061989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chromosome organization process in which meiotic chromosomes in the spem nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:19696886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyosome formation","termid":"GO:0061988"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"sperm karyosome formation","termid":"GO:0061989"}


id: GO:0120522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain 2,3-saturated fatty acyl-CoA + O2 = a short-chain (2E)-enoyl-CoA + H2O2.","definition_xrefs":["RHEA:78859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"short-chain fatty acyl-CoA oxidase activity","termid":"GO:0120522"}


id: MONDO:0005827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare syndrome characterized by almost complete absence of body fat, accentuated muscularity, insulin-resistant diabetes, hyperlipidemia, hepatomegaly, and hypermetabolism.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus","termid":"MONDO:0005148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005015","MONDO:0004335"],"is_obsolete":false,"name":"lipoatrophic diabetes","secondary_identifiers":["MEDGEN:4256","MESH:D003923","NANDO:2200465","SCTID:127012008","DOID:11712","SCTID:71325002","EFO:0007346","UMLS:C0011859","NCIT:C34537"],"synonyms":[{"name":"diabete, lipoatrophic","type":"exact"},{"name":"diabetes, lipoatrophic","type":"related"},{"name":"lipoatrophic diabete","type":"related"},{"name":"lipoatrophic diabetes","type":"exact"},{"name":"lipoatrophic diabetes mellitus","type":"related"}],"termid":"MONDO:0005827","xrefs":{"Monarch":{"xref_id":"0005827"}}}


id: MONDO:0031062
data:
  {"annotated_genes":["SJAG_00394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85532],"is_not":false,"summary":null,"term":"MONDO:0031062"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"polycystic kidney disease 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774222","DOID:0060952","OMIM:620056","MEDGEN:1823995"],"synonyms":[{"name":"PKD7","type":"exact"},{"name":"polycystic kidney disease 7","type":"exact"}],"termid":"MONDO:0031062","terms_by_termid":{"MONDO:0031062":null},"xrefs":{"Monarch":{"xref_id":"0031062"}}}


id: FYPO:0003154
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"}],"single_locus_phenotype":[{"annotations":[119027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth is abnormal in the vegetative growth phase of the life cycle. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal cell growth","termid":"FYPO:0002862"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00514":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta__rga6delta":{"display_name":"rga4delta rga6delta","display_uniquename":"rga4delta__rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00028","SJAG_04522"],"name":"abnormal vegetative cell growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00514"],"single_locus_genotype_uniquenames":["scd1delta"],"termid":"FYPO:0003154","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004105":null,"FYPO_EXT:0000001":null}}


id: MONDO:0001189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esophageal carcinoma (obsolete MONDO:0001189)","termid":"MONDO:0001189","xrefs":{"Monarch":{"xref_id":"0001189"}}}


id: PATO:0005013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lacking parts or having a reduced form compared to fully formed entities.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete structure","termid":"PATO:0005013"}


id: GO:1904892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor signaling via STAT.","definition_xrefs":["GOC:rjd","GO_REF:0000058","PMID:24587195","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor signaling pathway via STAT","synonyms":[{"name":"regulation of STAT signalling pathway","type":"exact"},{"name":"regulation of kinase activated-STAT cascade","type":"exact"},{"name":"regulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904892"}


id: FYPO:0001082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall polysaccharide level","termid":"FYPO:0002266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002946"],"is_obsolete":false,"name":"decreased cell wall beta-glucan level","synonyms":[{"name":"decreased cell wall beta-D-glucan level","type":"exact"},{"name":"decreased cell wall beta-glucan accumulation","type":"related"},{"name":"decreased cell wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall beta-glucan level during vegetative growth","type":"exact"},{"name":"reduced cell wall beta-glucan level","type":"exact"}],"termid":"FYPO:0001082"}


id: GO:0035069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage-specific break down of the larval midgut during Drosophila metamorphosis, to allow replacement of larval structures by tissues and structures that form the adult fly.","definition_xrefs":["GOC:mtg_apoptosis","PMID:9409683","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure regression","termid":"GO:0060033"},{"relation_name":"part_of","term_name":"metamorphosis","termid":"GO:0007552"},{"relation_name":"part_of","term_name":"instar larval or pupal morphogenesis","termid":"GO:0048707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval midgut histolysis","synonyms":[{"name":"larval midgut regression","type":"exact"}],"termid":"GO:0035069"}


id: SO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudoknots involved in recoding are unique in that, as they play their role as a structure, they are immediately unfolded and their now linear sequence serves as a template for decoding.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudoknot","termid":"SO:0000591"},{"relation_name":"part_of","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoding_pseudoknot","synonyms":[{"name":"recoding pseudoknot","type":"exact"}],"termid":"SO:0000545"}


id: PBO:0043112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"churchill domain containing 1","termid":"PBO:0043112"}


id: GO:0072181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric duct. A mesonephric duct is a tube that drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule formation","termid":"GO:0072172"},{"relation_name":"is_a","term_name":"nephric duct formation","termid":"GO:0072179"},{"relation_name":"is_a","term_name":"mesonephric duct morphogenesis","termid":"GO:0072180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct formation","synonyms":[{"name":"Wolffian duct formation","type":"exact"}],"termid":"GO:0072181"}


id: MONDO:0100472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lissencephaly spectrum disorder that manifests as posterior predominant pachygyria (ranging from mild severity to classic lissencephaly) and brainstem malformations which include brainstem dysplasia (typically with reduced anteroposterior thickness and transverse broadening of the pons/medulla) and midline crossing defects (anterior commissure, transverse pontine fibers, pyramidal tract, callosum hypoplasia).","direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly spectrum disorder with complex brainstem malformation","termid":"MONDO:0100472","xrefs":{"Monarch":{"xref_id":"0100472"}}}


id: GO:0098901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"}


id: PBO:0057846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3158-2","termid":"PBO:0057846"}


id: PBO:0072034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 4","termid":"PBO:0072034"}


id: GO:0048497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a floral organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:PO_curators","GOC:tair_curators","PMID:9090883","PO:0025395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of plant organ identity","termid":"GO:0090700"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of floral organ identity","termid":"GO:0048497"}


id: FYPO:0003089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at sites within the eukaryotic rDNA repeat spacer is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal replication fork arrest at rDNA repeats","synonyms":[{"name":"abnormal replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"abnormal replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0003089"}


id: MONDO:1012920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hernia of the linea alba that occurs in cattle due to a mutation in the TWIST1 gene.","definition_xrefs":["PMID:35187669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abdominal hernia, TWIST1-related, cattle","secondary_identifiers":["OMIA:002532-9913"],"termid":"MONDO:1012920","xrefs":{"Monarch":{"xref_id":"1012920"}}}


id: GO:0090514
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103591],"is_not":false,"summary":null,"term":"GO:0090514"}]},"cv_name":"biological_process","definition":"The directed movement of L-tyrosine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine transport","termid":"GO:0015828"},{"relation_name":"is_a","term_name":"amino acid transmembrane import into vacuole","termid":"GO:0032975"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-tyrosine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090514","terms_by_termid":{"GO:0090514":null}}


id: GO:0006042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine metabolic process","termid":"GO:0006041"},{"relation_name":"is_a","term_name":"glucosamine-containing compound biosynthetic process","termid":"GO:1901073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucosamine biosynthetic process","synonyms":[{"name":"chitosamine biosynthesis","type":"exact"},{"name":"chitosamine biosynthetic process","type":"exact"},{"name":"glucosamine anabolism","type":"exact"},{"name":"glucosamine biosynthesis","type":"exact"},{"name":"glucosamine formation","type":"exact"},{"name":"glucosamine synthesis","type":"exact"}],"termid":"GO:0006042"}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: PBO:0039643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1AR divergent transcript","termid":"PBO:0039643"}


id: SO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region within which self-interaction occurs more often than expected by chance because of DNA-looping.","definition_xrefs":["PMID:32782014","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_defined_region","synonyms":[{"name":"topologically defined region","type":"exact"}],"termid":"SO:0001412"}


id: GO:0045039
data:
  {"annotated_genes":["SJAG_00404","SJAG_01640","SJAG_01120","SJAG_02524","SJAG_02398","SJAG_04208","SJAG_03502","SJAG_04996","SJAG_03515","SJAG_01949","SJAG_00687"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73288,73772,75406,77599,88417,90154,102675,107321,107343,112941,116009],"is_not":false,"summary":null,"term":"GO:0045039"}]},"cv_name":"biological_process","definition":"The processes mediating the insertion of proteins into the mitochondrial inner membrane. Mitochondrial inner membrane proteins can get inserted from the cytosol, by crossing the outer membrane and being guided by an inner membrane translocase complex into their final destination in the inner membrane. Some proteins present in the intermembrane space can get inserted into the inner mitochondrial membrane. Finally, some proteins are inserted into the inner membrane from the matrix side of the membrane.","definition_xrefs":["GOC:mcc","GOC:vw","PMID:18672008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transport","termid":"GO:0006839"},{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrial membrane","termid":"GO:0090151"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01640":null,"SJAG_01949":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_04208":null,"SJAG_04996":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0061024","GO:0007005","GO:0006605","GO:0008150"],"is_obsolete":false,"name":"protein insertion into mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial inner membrane protein import","type":"exact"},{"name":"protein import into mitochondrial inner membrane","type":"exact"},{"name":"protein transport into mitochondrial inner membrane","type":"exact"}],"termid":"GO:0045039","terms_by_termid":{"GO:0045039":null}}


id: MONDO:0017275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-facial-cutaneous lesions syndrome is a complex form of hereditary spastic paraplegia characterized by delays in motor development followed by a slowly progressive spastic paraplegia (affecting mainly lower extremities) associated with a desquamating facial rash with butterfly distribution (presenting at around two months of age) and dysarthria. There have been no further descriptions in the literature since 1982.","definition_xrefs":["Orphanet:2819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia-facial-cutaneous lesions syndrome","secondary_identifiers":["MESH:C537797","SCTID:763403007","MEDGEN:419453","UMLS:C2931617","GARD:806"],"synonyms":[{"name":"Bahemuka Brown syndrome","type":"related"},{"name":"Bahemuka-Brown syndrome","type":"exact"},{"name":"spastic paraplegia facial cutaneous lesions","type":"related"}],"termid":"MONDO:0017275","xrefs":{"Monarch":{"xref_id":"0017275"}}}


id: MONDO:0000531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma that involves the bronchus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchogenic carcinoma","termid":"MONDO:0002806"},{"relation_name":"is_a","term_name":"pulmonary mucoepidermoid carcinoma","termid":"MONDO:0005616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bronchus mucoepidermoid carcinoma","secondary_identifiers":["DOID:0050916"],"synonyms":[{"name":"bronchus mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0000531","xrefs":{"Monarch":{"xref_id":"0000531"}}}


id: GO:1900158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization involved in bone maturation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of bone mineralization","termid":"GO:0030502"},{"relation_name":"is_a","term_name":"regulation of bone mineralization involved in bone maturation","termid":"GO:1900157"},{"relation_name":"negatively_regulates","term_name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone mineralization involved in bone maturation","synonyms":[{"name":"down regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"down-regulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"downregulation of bone mineralization involved in bone maturation","type":"exact"},{"name":"inhibition of bone mineralization involved in bone maturation","type":"narrow"}],"termid":"GO:1900158"}


id: MONDO:0022876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortes Lacassie syndrome","termid":"MONDO:0022876","xrefs":{"Monarch":{"xref_id":"0022876"}}}


id: PBO:0015232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pep5/Vps11-like (predicted)","termid":"PBO:0015232"}


id: PBO:0054776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2189","termid":"PBO:0054776"}


id: PBO:0038636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 1","termid":"PBO:0038636"}


id: PR:O94691
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- jmj3 gene.","definition_xrefs":["UniProtKB:O94691","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lid2 complex component jmj3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.07","synonyms":[{"name":"Lid2C component jmj3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-jmj3","type":"exact"}],"termid":"PR:O94691"}


id: GO:0019087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A symbiont-induced cellular transformation resulting in immortalized cells, or cells capable of indefinite replication. Usually mediated by viruses.","definition_xrefs":["PMID:24373315","PMID:11119620","ISBN:0781702534","PMID:18366075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated transformation of host cell","secondary_identifiers":["GO:0020021","GO:0019088","Wikipedia:Viral_transformation"],"synonyms":[{"name":"host cell immortalization","type":"exact"},{"name":"host cell transformation","type":"exact"},{"name":"immortalization of host cell","type":"exact"},{"name":"immortalization of host cell by virus","type":"related"},{"name":"transformation of host cell","type":"exact"},{"name":"transformation of host cell by virus","type":"exact"},{"name":"viral immortalization","type":"exact"},{"name":"viral transformation","type":"exact"},{"name":"viral transformation of host cell","type":"exact"},{"name":"virus-mediated transformation of host cell","type":"related"}],"termid":"GO:0019087"}


id: GO:1990173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the nucleoplasm.","definition_xrefs":["GOC:mah","PMID:22918952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleoplasm","secondary_identifiers":["GO:0032066"],"synonyms":[{"name":"nucleolus to nucleoplasm transport","type":"related"},{"name":"protein localisation to nucleoplasm","type":"exact"}],"termid":"GO:1990173"}


id: GO:1902300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which galactaric acid anion (galactarate) is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"galactarate transmembrane transport","secondary_identifiers":["GO:0042871"],"synonyms":[{"name":"D-galactarate transport","type":"related"},{"name":"galactarate transport","type":"related"},{"name":"galactaric acid anion transport","type":"exact"}],"termid":"GO:1902300"}


id: GO:0043315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of neutrophil degranulation","termid":"GO:0043313"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"neutrophil degranulation","termid":"GO:0043312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of neutrophil degranulation","synonyms":[{"name":"activation of neutrophil degranulation","type":"narrow"},{"name":"positive regulation of neutrophil granule exocytosis","type":"exact"},{"name":"stimulation of neutrophil degranulation","type":"narrow"},{"name":"up regulation of neutrophil degranulation","type":"exact"},{"name":"up-regulation of neutrophil degranulation","type":"exact"},{"name":"upregulation of neutrophil degranulation","type":"exact"}],"termid":"GO:0043315"}


id: GO:0008670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: a 4,5-saturated-(2E)-enoyl-CoA + NADP+ = a (2E,4E)-dienoyl-CoA + H+ + NADPH, and a (2E,4Z)-dienoyl-CoA + H+ + NADPH = a 4,5-saturated-(2E)-enoyl-CoA + NADP+.","definition_xrefs":["EC:1.3.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,4-dienoyl-CoA reductase (NADPH) activity","synonyms":[{"name":"4-enoyl coenzyme A (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"4-enoyl-CoA reductase (NADPH) activity","type":"related"},{"name":"4-enoyl-CoA reductase (NADPH2)","type":"related"},{"name":"4-enoyl-CoA reductase activity","type":"related"},{"name":"trans-2,3-didehydroacyl-CoA:NADP+ 4-oxidoreductase activity","type":"related"}],"termid":"GO:0008670"}


id: FYPO:0002758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 4-nitroquinoline N-oxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to 4-nitroquinoline N-oxide","synonyms":[{"name":"resistance to 4-NQO","type":"exact"},{"name":"resistance to 4-nitroquinoline N-oxide during mitotic cell cycle","type":"related"},{"name":"resistance to 4-nitroquinoline N-oxide during vegetative growth","type":"exact"},{"name":"resistance to 4NQO","type":"exact"},{"name":"resistant to 4-nitroquinoline N-oxide","type":"exact"}],"termid":"FYPO:0002758"}


id: MONDO:0014090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly type A","termid":"MONDO:0019673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type A6","secondary_identifiers":["GARD:18176","OMIM:615226","UMLS:C3808889","MEDGEN:815219"],"synonyms":[{"name":"PAPA6","type":"related"},{"name":"polydactyly, postaxial, type A6","type":"exact"}],"termid":"MONDO:0014090","xrefs":{"Monarch":{"xref_id":"0014090"}}}


id: PBO:0051815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 1","termid":"PBO:0051815"}


id: PBO:0030658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_Man9GlcNAc_level","termid":"PBO:0030658"}


id: GO:0075175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cAMP-mediated signaling in response to host (obsolete GO:0075175)","synonyms":[{"name":"positive regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"positive regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"positive regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075175"}


id: PBO:0040521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AZGP1 pseudogene 1","termid":"PBO:0040521"}


id: MONDO:1010234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Olivopontocerebellar atrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olivopontocerebellar atrophy, non-human animal","secondary_identifiers":["OMIA:000740"],"termid":"MONDO:1010234","xrefs":{"Monarch":{"xref_id":"1010234"}}}


id: PBO:0088813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Aah2","termid":"PBO:0088813"}


id: GO:0035679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when an anterior lateral line neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["ISBN:0125296509","ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell morphogenesis","termid":"GO:0035678"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast hair cell development","termid":"GO:0035676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast hair cell morphogenesis","termid":"GO:0035679"}


id: PBO:0031809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_at_mitotic_START","termid":"PBO:0031809"}


id: GO:1901336
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lactone anabolism","type":"exact"},{"name":"lactone biosynthesis","type":"exact"},{"name":"lactone formation","type":"exact"},{"name":"lactone synthesis","type":"exact"}],"termid":"GO:1901336","terms_by_termid":{"GO:0070485":null}}


id: PBO:0066150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 6","termid":"PBO:0066150"}


id: PBO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase (predicted)","termid":"PBO:0001856"}


id: FYPO:0006303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:1903478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to actomyosin contractile ring","termid":"FYPO:0002699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000631","FYPO:0005447","FYPO:0000032"],"is_obsolete":false,"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to cytokinetic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to mitotic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein recruitment to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"related"},{"name":"reduced protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0006303"}


id: FYPO:0006673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the total amount of DNA in a spore is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"altered DNA level","termid":"FYPO:0004320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA content in spore","synonyms":[{"name":"DNA content decreased in spore","type":"exact"},{"name":"decreased DNA level in spore","type":"exact"},{"name":"reduced DNA content in spore","type":"exact"},{"name":"spores with less than 1C DNA content","type":"exact"}],"termid":"FYPO:0006673"}


id: MONDO:0019711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with predominant vertebral and costal involvement (obsolete MONDO:0019711)","secondary_identifiers":["icd11.foundation:395969787","Orphanet:93454"],"termid":"MONDO:0019711","xrefs":{"Monarch":{"xref_id":"0019711"}}}


id: MONDO:0700182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Erythroleukemia that occurs in a cat.","definition_xrefs":["NCIT:C134770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline erythroleukemia","termid":"MONDO:0700182","xrefs":{"Monarch":{"xref_id":"0700182"}}}


id: MONDO:0005386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the arteries supplying the upper and lower extremity and the visceral organs. This includes the mesenteric arteries, the renal arteries and the aorta and excludes cerebrovascular arterial disease. Patients experience cramping and pain usually in the calves and thighs while walking. The symptoms subside with rest.","definition_xrefs":["NCIT:C84496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"peripheral vascular disease","termid":"MONDO:0005294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral arterial disease","secondary_identifiers":["SCTID:399957001","MEDGEN:352846","EFO:0004265","UMLS:C1704436","ICD9:443.81","DOID:0050830","MESH:D058729"],"synonyms":[{"name":"PAD","type":"exact"},{"name":"pad","type":"exact"},{"name":"peripheral arterial disorder","type":"exact"},{"name":"peripheral artery disease","type":"related"}],"termid":"MONDO:0005386","xrefs":{"Monarch":{"xref_id":"0005386"}}}


id: MOD:00375
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4,5-dihydroxy-L-lysine.","definition_xrefs":["RESID:AA0370","PubMed:12686488","Unimod:425#K","PubMed:10978343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated lysine","termid":"MOD:00681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4,5-dihydroxy-L-lysine","synonyms":[{"name":"(2S,4Xi,5Xi)-2,6-diamino-4,5-dihydroxyhexanoic acid","type":"exact"},{"name":"4,5-dihydroxy-L-lysine","type":"exact"},{"name":"4,5-dihydroxylated L-lysine","type":"exact"},{"name":"45Hy2Lys","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"MOD_RES 4,5-dihydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-delta,gamma-dihydroxycaproic acid","type":"exact"},{"name":"delta,gamma-dihydroxylysine","type":"exact"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:00375"}


id: PBO:0040335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 1","termid":"PBO:0040335"}


id: MONDO:0018471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Generalized eruptive keratoacanthoma (GEKA) is rare variant of keratoacanthoma (KA) that affects the skin and mucous membranes and which is characterized by a sudden generalized eruption of severely pruritic, hundreds to thousands of small follicular papules, often with a central keratotic plug.","definition_xrefs":["Orphanet:411777"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"keratoacanthoma","termid":"MONDO:0002527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"generalized eruptive keratoacanthoma","secondary_identifiers":["SCTID:254664008","UMLS:C0345985","MEDGEN:577226","GARD:21736"],"synonyms":[{"name":"GEKA","type":"exact"},{"name":"Grzybowski syndrome","type":"exact"},{"name":"generalised eruptive keratoacanthomas of Grzybowski","type":"exact"},{"name":"generalized eruptive keratoacanthomas of Grzybowski","type":"exact"}],"termid":"MONDO:0018471","xrefs":{"Monarch":{"xref_id":"0018471"}}}


id: PBO:0062961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 4","termid":"PBO:0062961"}


id: FYPO:0002549
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[119063,119051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000726"},{"annotations":[119062,119050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show increased sensitivity to a stress. Typically, a cell population is deemed sensitive to a stress if cells in the population stop growing (and may die) when exposed to the stress at an intensity that allows a population of wild type cells to grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to stress","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592","SJAG_04312"],"single_locus_genotype_uniquenames":["atf1delta","pka1delta","sty1delta"],"synonyms":[{"name":"decreased growth during cellular response to stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to stress","type":"exact"},{"name":"hypersensitive to stress","type":"exact"},{"name":"stress resistance: decreased","type":"related"}],"termid":"FYPO:0002549","terms_by_termid":{"FYECO:0000078":null,"FYECO:0000207":null,"FYPO:0000087":null,"FYPO:0000271":null,"FYPO:0000726":null,"FYPO_EXT:0000001":null}}


id: FYPO:0003045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the centromere than normal, such that it extends beyond the IRC1R boundary element.","definition_xrefs":["PomBase:mah","PMID:24013502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of centromeric heterochromatin assembly","termid":"FYPO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRC1R","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRC1R during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRC1R during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRC1R","type":"exact"}],"termid":"FYPO:0003045"}


id: FYPO:0005381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the gamma-tubulin complex is localized to only one spindle pole body instead of both.","definition_xrefs":["PMID:11102508","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","termid":"FYPO:0004589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"asymmetric gamma-tubulin complex localization to single mitotic spindle pole body","synonyms":[{"name":"abnormal gamma-tubulin complex localization to single mitotic spindle pole body","type":"exact"},{"name":"abnormally asymmetric gamma-tubulin complex localization to single mitotic spindle pole body","type":"exact"},{"name":"asymmetric gamma-tubulin complex localisation to single mitotic spindle pole body","type":"exact"},{"name":"asymmetric gamma-tubulin complex localization to single mitotic SPB","type":"exact"},{"name":"asymmetric gamma-tubulin complex localization to single mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"asymmetric gamma-tubulin complex localization to single mitotic spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0005381"}


id: PBO:0005194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tyrosine-tRNA ligase Yrs1 (predicted)","termid":"PBO:0005194"}


id: PBO:0046170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELFN1 antisense RNA 1","termid":"PBO:0046170"}


id: GO:0000253
data:
  {"annotated_genes":["SJAG_03235"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70593],"is_not":false,"summary":null,"term":"GO:0000253"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-betahydroxyl sterol + NADP+ = a 3-oxosterol sterol + NADPH + H+.","definition_xrefs":["GOC:mah","EC:1.1.1.270","PMID:9811880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:34787","GO:0050576","MetaCyc:RXN-13686","Reactome:R-HSA-194689","Reactome:R-HSA-194632"],"synonyms":[{"name":"3-KSR activity","type":"related"},{"name":"3-keto sterol reductase activity","type":"exact"},{"name":"3-keto-steroid reductase activity","type":"exact"},{"name":"3beta-hydroxy-steroid:NADP+ 3-oxidoreductase","type":"related"}],"termid":"GO:0000253","terms_by_termid":{"GO:0000253":null}}


id: PBO:0071977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 5","termid":"PBO:0071977"}


id: PBO:0045989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 3","termid":"PBO:0045989"}


id: GO:1903984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","PMID:24939851","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902043"},{"relation_name":"is_a","term_name":"regulation of TRAIL-activated apoptotic signaling pathway","termid":"GO:1903121"},{"relation_name":"positively_regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"activation of TRAIL-activated apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-induced apoptotic signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"narrow"},{"name":"positive regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"upregulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903984"}


id: PBO:0085358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphopantetheinyl transferase involved in lysine biosynthesis; converts inactive apo-form of Lys2p (alpha-aminoadipate reductase) into catalytically active holo-form by posttranslational addition of phosphopantetheine","termid":"PBO:0085358"}


id: FYPO:0000818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of M-factor, the mating pheromone produced by mating type minus cells, released into the growth medium is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of pheromone in growth medium","termid":"FYPO:0000817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"increased concentration of M-factor in growth medium","synonyms":[{"name":"increased accumulation of M-factor in growth medium","type":"related"},{"name":"increased level of M-factor in growth medium","type":"exact"},{"name":"increased release of M-factor into growth medium","type":"related"}],"termid":"FYPO:0000818"}


id: GO:0021980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of cells from one site to another in the subpallium.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"},{"relation_name":"part_of","term_name":"subpallium development","termid":"GO:0021544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium cell migration","termid":"GO:0021980"}


id: MONDO:0060688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthyroxinemia, euthyroid, caused by generalized 5-prime-deiodinase deficiency","secondary_identifiers":["OMIM:617953","UMLS:C1840059","MEDGEN:326643"],"synonyms":[{"name":"hyperthyroxinemia, euthyroid, caused by generalized 5-prime-deiodinase deficiency","type":"exact"},{"name":"hyperthyroxinemia, euthyroid, due to decreased peripheral conversion of T4","type":"related"}],"termid":"MONDO:0060688","xrefs":{"Monarch":{"xref_id":"0060688"}}}


id: FYPO:0000745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch internalization begins later than normal. Actin cortical patch internalization is the process in which the patch moves from the cell surface to the inside of the cell.","definition_xrefs":["PomBase:mah","PMID:21620704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch internalization","termid":"FYPO:0000743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of actin cortical patch internalization","synonyms":[{"name":"delayed actin cortical patch internalization","type":"exact"},{"name":"delayed onset of F-actin patch internalization","type":"exact"},{"name":"delayed onset of abnormal actin cortical patch internalization during vegetative growth","type":"exact"},{"name":"delayed onset of actin cortical patch internalisation","type":"exact"},{"name":"delayed onset of actin cortical patch internalization during mitotic cell cycle","type":"related"},{"name":"delayed onset of actin patch internalization","type":"exact"}],"termid":"FYPO:0000745"}


id: PBO:0003593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 h4.2","termid":"PBO:0003593"}


id: MOD:00755
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an iodine atom of a residue for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodinated residue","synonyms":[{"name":"IRes","type":"exact"}],"termid":"MOD:00755"}


id: PBO:0051207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-38-2","termid":"PBO:0051207"}


id: PBO:0017429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_input","termid":"PBO:0017429"}


id: RO:HOM0000068
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Xenology that is characterized by multiple horizontal transfer events, resulting in the presence of two or more copies of the foreign gene in the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_xenology_relationship_with","termid":"RO:HOM0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paraxenology_relationship_with","synonyms":[{"name":"duplicate xenology","type":"exact"},{"name":"multiple xenology","type":"exact"},{"name":"paraxenologous to","type":"exact"}],"termid":"RO:HOM0000068"}


id: PBO:0061216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 8","termid":"PBO:0061216"}


id: MONDO:1010819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, cattle","secondary_identifiers":["OMIA:000810-9913"],"termid":"MONDO:1010819","xrefs":{"Monarch":{"xref_id":"1010819"}}}


id: GO:1900163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid scramblase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transporter activity","termid":"GO:0110113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipid scramblase activity","synonyms":[{"name":"activation of phospholipid scramblase activity","type":"narrow"},{"name":"up regulation of phospholipid scramblase activity","type":"exact"},{"name":"up-regulation of phospholipid scramblase activity","type":"exact"},{"name":"upregulation of phospholipid scramblase activity","type":"exact"}],"termid":"GO:1900163"}


id: PBO:0061722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2G","termid":"PBO:0061722"}


id: GO:0015532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: alpha-ketoglutarate(out) + H+(out) = alpha-ketoglutarate(in) + H+(in).","definition_xrefs":["TC:2.A.1.6.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transmembrane transporter activity","termid":"GO:0015139"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"alpha-ketoglutarate:proton symporter activity","synonyms":[{"name":"2-oxoglutarate:hydrogen symporter activity","type":"exact"},{"name":"2-oxoglutarate:proton symporter activity","type":"exact"},{"name":"alpha-ketoglutarate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015532"}


id: MONDO:0018981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neonatal epilepsy syndrome characterized by seizures without specific underlying etiology, occurring during the first days of life in infants with an otherwise normal neurological state and no family history of neonatal convulsions. The most commonly partial and clonic seizures usually last for one to three minutes. Repeated seizures may lead to status epilepticus lasting up to 20 hours. Overall, remission rates are high and neurological outcome is favorable.","definition_xrefs":["Orphanet:64545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal epilepsy syndrome","termid":"MONDO:0020070"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign idiopathic neonatal seizures","secondary_identifiers":["UMLS:C0393693","GARD:18860","icd11.foundation:1131336245","MEDGEN:140738"],"synonyms":[{"name":"BINS","type":"exact"},{"name":"benign nonfamilial neonatal seizures","type":"exact"}],"termid":"MONDO:0018981","xrefs":{"Monarch":{"xref_id":"0018981"}}}


id: GO:1990569
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77425],"is_not":false,"summary":null,"term":"GO:1990569"}]},"cv_name":"biological_process","definition":"The process in which UDP-N-acetylglucosamine is transported across a membrane.","definition_xrefs":["PMID:10788474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0015788"],"synonyms":[{"name":"UDP-N-acetylglucosamine transport","type":"related"}],"termid":"GO:1990569","terms_by_termid":{"GO:1990569":null}}


id: GO:0098940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from presynapse to postynapse, across the synaptic cleft, mediated by nitric oxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"anterograde trans-synaptic signaling by nitric oxide","termid":"GO:0098940"}


id: GO:0018094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of glycyl units covalently bound to the gamma carboxyl group peptidyl-glutamic acid.","definition_xrefs":["RESID:AA0201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein polyglycylation","termid":"GO:0018094"}


id: FYPO:0001395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal activation of monopolar cell growth","synonyms":[{"name":"normal activation of monopolar vegetative cell growth","type":"exact"},{"name":"normal initiation of growth from old end following cell division","type":"exact"}],"termid":"FYPO:0001395"}


id: GO:0015608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carbohydrate(out) -> ADP + phosphate + carbohydrate(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"carbohydrate-importing ABC transporter activity","secondary_identifiers":["TC:3.A.1.1.1"],"synonyms":[{"name":"carbohydrate uptake transporter activity","type":"exact"},{"name":"carbohydrate-importing ATPase activity","type":"broad"},{"name":"sugar transporter","type":"narrow"}],"termid":"GO:0015608"}


id: PBO:0039519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B antisense RNA 1","termid":"PBO:0039519"}


id: GO:1905497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of triplex DNA binding.","definition_xrefs":["PMID:26503245","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of triplex DNA binding (obsolete GO:1905497)","synonyms":[{"name":"down regulation of triplex DNA binding","type":"exact"},{"name":"down-regulation of triplex DNA binding","type":"exact"},{"name":"downregulation of triplex DNA binding","type":"exact"},{"name":"inhibition of triplex DNA binding","type":"narrow"}],"termid":"GO:1905497"}


id: PBO:0086270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein tyrosine phosphatase; involved in cell cycle control and retrograde protein transport; regulates the phosphorylation state of Cdc28p; modulates phosphorylation of retromer component Vps26p; homolog of S. pombe cdc25","termid":"PBO:0086270"}


id: MONDO:0008510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Symphalangism with multiple anomalies of hands and feet is an exceedingly rare syndrome described in one family and characterized by proximal symphalangism and multiple hand and feet disorders (syndactyly, clinodactyly, hypoplasia of the thenar and hypothenar eminences, and a distinctive dermatoglyphic pattern). There have been no further descriptions in the literature since 1981.","definition_xrefs":["Orphanet:3246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symphalangism","termid":"MONDO:0000151"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symphalangism with multiple anomalies of hands and feet","secondary_identifiers":["MESH:C566098","OMIM:185750","GARD:5077","MEDGEN:348859","SCTID:732955001","UMLS:C1861391"],"synonyms":[{"name":"Learman syndrome","type":"exact"},{"name":"symphalangism with multiple anomalies of hands and feet","type":"exact"}],"termid":"MONDO:0008510","xrefs":{"Monarch":{"xref_id":"0008510"}}}


id: PBO:0049020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 2","termid":"PBO:0049020"}


id: GO:0048444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the floral organ are generated and organized.","definition_xrefs":["GOC:go_curators","GOC:PO_curators","PO:0025395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant organ morphogenesis","termid":"GO:0090697"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ morphogenesis","secondary_identifiers":["GO:0048434"],"termid":"GO:0048444"}


id: PBO:0087689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Nup84 nuclear pore and SEACAT subcomplexes; involved in nucleocytoplasmic transport and NPC biogenesis in the nuclear pore subcomplex; subunit of SEACAT, a subcomplex of the SEA complex that inhibits the TORC1 inhibitory role of SEACIT (Iml1p-Npr2p-Npr3p), a GAP for Gtr1p in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; human SEH1 homolog","termid":"PBO:0087689"}


id: MONDO:0010046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 23 (SPG23) is a rare, complex type of hereditary spastic paraplegia that presents in childhood with progressive spastic paraplegia, associated with peripheral neuropathy, skin pigment abnormalities (i.e. vitiligo, hyperpigmentation, diffuse lentigines), premature graying of hair, and characteristic facies (i.e. thin with ''sharp'' features). The SPG23 phenotype has been mapped to a locus on chromosome 1q24-q32.","definition_xrefs":["Orphanet:101003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 23","secondary_identifiers":["OMIM:270750","SCTID:726608002","GARD:336","UMLS:C0796019","DOID:0110774","MEDGEN:167094","MESH:C536859"],"synonyms":[{"name":"DSTYK autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"Lison syndrome","type":"exact"},{"name":"SPG 23","type":"related"},{"name":"SPG23","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in DSTYK","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 23","type":"related"},{"name":"hereditary spastic paraplegia type 23","type":"exact"},{"name":"spastic paraparesis, vitiligo, premature graying, characteristic facies","type":"related"},{"name":"spastic paraparesis-vitiligo-premature graying-characteristic facies syndrome","type":"exact"},{"name":"spastic paraplegia 23","type":"exact"},{"name":"spastic paraplegia and pigmentary abnormalities","type":"related"},{"name":"spastic paraplegia vitiligo premature graying and characteristic facies","type":"related"},{"name":"spastic paraplegia vitiligo premature greying and characteristic facies","type":"related"},{"name":"spastic paraplegia with pigmentary abnormalities","type":"exact"}],"termid":"MONDO:0010046","xrefs":{"Monarch":{"xref_id":"0010046"}}}


id: MONDO:0007661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurologic disorder caused by defective metabolism of the neurotransmitters in the brain. It is characterized by repeated involuntary movements (motor tics) and uncontrollable vocal sounds (vocal tics). The symptoms are usually manifested before the age of eighteen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"tic disorder","termid":"MONDO:0002420"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tourette syndrome","secondary_identifiers":["MEDGEN:21219","EFO:0004895","MESH:D005879","OMIM:137580","ICD9:307.23","SCTID:5158005","Orphanet:856","DOID:11119","icd11.foundation:119340957","UMLS:C0040517","NCIT:C35078"],"synonyms":[{"name":"GTS","type":"related"},{"name":"Gilles De 50A Tourette syndrome","type":"related"},{"name":"Gilles de la Tourette syndrome","type":"related"},{"name":"Guinon's disease","type":"exact"},{"name":"Tourette disease","type":"exact"},{"name":"Tourette disorder","type":"related"},{"name":"Tourette syndrome","type":"exact"},{"name":"Tourette's syndrome","type":"exact"},{"name":"chronic motor tics","type":"related"},{"name":"motor-verbal tic disorder","type":"exact"},{"name":"psychogenic tics","type":"exact"}],"termid":"MONDO:0007661","xrefs":{"Monarch":{"xref_id":"0007661"}}}


id: RO:HOM0000024
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that results from a duplication preceding a given speciation event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_out-paralogy_relationship_with","synonyms":[{"name":"alloparalogy","type":"exact"},{"name":"out-paralogous to","type":"exact"},{"name":"outparalogy","type":"exact"}],"termid":"RO:HOM0000024"}


id: MONDO:0006925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family Fusobacteriaceae, in the order Fusobacterales, phylum fusobacteria.","definition_xrefs":["MESH:D045825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fusobacteriaceae infectious disease","secondary_identifiers":["UMLS:C1258222","MEDGEN:263530"],"synonyms":[{"name":"Fusobacteriaceae caused disease or disorder","type":"exact"},{"name":"Fusobacteriaceae disease or disorder","type":"exact"},{"name":"Fusobacteriaceae infection","type":"related"},{"name":"infection, Fusobacteriaceae","type":"related"},{"name":"infections, Fusobacteriaceae","type":"related"}],"termid":"MONDO:0006925","xrefs":{"Monarch":{"xref_id":"0006925"}}}


id: PBO:0071467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 8","termid":"PBO:0071467"}


id: PBO:0012834
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by H. sapiens HRAS","termid":"PBO:0012834"}


id: GO:0052336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by host of symbiont cell wall (obsolete GO:0052336)","synonyms":[{"name":"metabolism of symbiont cell wall by organism","type":"exact"}],"termid":"GO:0052336"}


id: PBO:0055840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and immunoglobulin like domains 1","termid":"PBO:0055840"}


id: GO:0048856
data:
  {"annotated_genes":["SJAG_01531","SJAG_04470","SJAG_02320","SJAG_03483","SJAG_01321","SJAG_01993","SJAG_03013","SJAG_00663","SJAG_02989","SJAG_04238","SJAG_02700","SJAG_03746","SJAG_00114","SJAG_00405","SJAG_03536","SJAG_00974","SJAG_03688","SJAG_02718","SJAG_04010","SJAG_00514","SJAG_02392","SJAG_02169","SJAG_01662","SJAG_04922","SJAG_03090","SJAG_01769","SJAG_01483","SJAG_03057","SJAG_00486","SJAG_04236","SJAG_04509","SJAG_04140","SJAG_04853","SJAG_02529","SJAG_00993","SJAG_01943","SJAG_04275","SJAG_01017","SJAG_03557","SJAG_04483","SJAG_04271","SJAG_03501","SJAG_04901","SJAG_04868","SJAG_05309","SJAG_02248","SJAG_00971","SJAG_04781","SJAG_03250","SJAG_02241","SJAG_02712","SJAG_01894","SJAG_03915","SJAG_00821","SJAG_04615","SJAG_04080","SJAG_04184","SJAG_03581","SJAG_04859","SJAG_02864","SJAG_00826","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89624,94337,95604],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[111258,112456,96694,96275,104884,100484],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030437"},{"annotations":[93780,111064],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[94223],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[87972,90010,88464,91533],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[72795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[103924,113824,117524,117532,108824],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[104736,72796,91264],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[107137,109865,118274,118757,91054,101463,99662,97308,97345,113673,118575,95129,98587,105050],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[99595,106590,107470,96627,113674,102670,103882,92055,97309,99594],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[87653,93781],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042815"},{"annotations":[98045,98739,114063,92277,98657,88019],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[110948],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[90489],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[102042],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[90491],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[117972],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075319"},{"annotations":[91952],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[99596,94264,99597,99877,105773,115714],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02529":null,"SJAG_02700":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03501":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03581":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure development","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"development of an anatomical structure","type":"exact"}],"termid":"GO:0048856","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0042815":null,"GO:0051517":null,"GO:0051519":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:0075319":null,"GO:1903024":null,"GO:1904600":null}}


id: MONDO:0014351
data:
  {"annotated_genes":["SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86173],"is_not":false,"summary":null,"term":"MONDO:0014351"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the AMPD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04123":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:862791","UMLS:C4014354","DOID:0060278","GARD:17590","OMIM:615809","Orphanet:369920"],"synonyms":[{"name":"AMPD2 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"PCH9","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in AMPD2","type":"exact"},{"name":"pontocerebellar hypoplasia, type 9","type":"related"}],"termid":"MONDO:0014351","terms_by_termid":{"MONDO:0014351":null},"xrefs":{"Monarch":{"xref_id":"0014351"}}}


id: PBO:0004808
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.86","termid":"PBO:0004808"}


id: MONDO:0014378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CCNO gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 29","secondary_identifiers":["UMLS:C4014534","GARD:16025","OMIM:615872","DOID:0110600","MEDGEN:862971","NCIT:C172393"],"synonyms":[{"name":"CCNO primary ciliary dyskinesia","type":"exact"},{"name":"CILD29","type":"exact"},{"name":"ciliary dyskinesia, primary, 29","type":"related"},{"name":"ciliary dyskinesia, primary, 29, without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 29","type":"exact"},{"name":"primary ciliary dyskinesia 29 without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in CCNO","type":"exact"},{"name":"primary ciliary dyskinesia type 29","type":"exact"}],"termid":"MONDO:0014378","xrefs":{"Monarch":{"xref_id":"0014378"}}}


id: PBO:0061847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OLA1 pseudogene 1","termid":"PBO:0061847"}


id: PBO:0086185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein serine/threonine kinase; essential for cell wall remodeling during growth; localized to sites of polarized growth and the mother-daughter bud neck; homolog of the alpha, beta, and gamma isoforms of mammalian protein kinase C (PKC)","termid":"PBO:0086185"}


id: PBO:0080610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 45B pseudogene 1","termid":"PBO:0080610"}


id: PBO:0077885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein adipocyte associated 1","termid":"PBO:0077885"}


id: GO:0008076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel complex","termid":"GO:0034705"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"voltage-gated potassium channel complex","secondary_identifiers":["NIF_Subcellular:sao371494298"],"synonyms":[{"name":"voltage gated potassium channel complex","type":"exact"},{"name":"voltage-dependent potassium channel complex","type":"exact"},{"name":"voltage-sensitive potassium channel complex","type":"exact"}],"termid":"GO:0008076"}


id: PBO:0004046
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opposite strand to sno20","termid":"PBO:0004046"}


id: PBO:0068737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 8, pseudogene","termid":"PBO:0068737"}


id: FYPO:0000454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which a microcolony forms, all cells in the population are inviable, and some cells are longer and other cells smaller than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including long and short cells (obsolete FYPO:0000454)","synonyms":[{"name":"inviable mixed population including long and short vegetative cells","type":"exact"}],"termid":"FYPO:0000454"}


id: MONDO:0018413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete female infertility due to an anomaly of ovarian function of genetic origin (obsolete MONDO:0018413)","secondary_identifiers":["Orphanet:400022"],"termid":"MONDO:0018413","xrefs":{"Monarch":{"xref_id":"0018413"}}}


id: PBO:0033801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_frequency_of_double-strand_break_repair_via_homologous_recombination","termid":"PBO:0033801"}


id: MONDO:0030676
data:
  {"annotated_genes":["SJAG_04840"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86876],"is_not":false,"summary":null,"term":"MONDO:0030676"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonism-dystonia, infantile","termid":"MONDO:0013150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"parkinsonism-dystonia 3, childhood-onset","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5676913","MEDGEN:1808365","OMIM:619738"],"synonyms":[{"name":"PKDYS3","type":"exact"},{"name":"parkinsonism-dystonia 3, childhood-onset","type":"exact"}],"termid":"MONDO:0030676","terms_by_termid":{"MONDO:0030676":null},"xrefs":{"Monarch":{"xref_id":"0030676"}}}


id: PBO:0091290
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM-like Enriched in Stalks","termid":"PBO:0091290"}


id: FYPO:0007911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of GTP-bound protein measured in the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PMID:19189958","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of GTP-bound protein","termid":"FYPO:0007911"}


id: PBO:0027696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_curved_cytoplasmic_microtubules","termid":"PBO:0027696"}


id: PBO:0091560
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Morphology and Distribution","termid":"PBO:0091560"}


id: GO:0098820
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that spans the synaptic cleft and has parts in both the pre- and post-synaptic membranes.","definition_xrefs":["PMID:20200227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"trans-synaptic protein complex","termid":"GO:0098820"}


id: PBO:0072963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin V","termid":"PBO:0072963"}


id: PBO:0003905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1 repeat protein Nif1","termid":"PBO:0003905"}


id: FYPO:0005001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein having high molecular mass due to polyubiquitin conjugation is lower than normal.","definition_xrefs":["PomBase:mah","PMID:10082519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased cellular HMW ubiquitin conjugate level","synonyms":[{"name":"decreased cellular HMW ubiquitin conjugate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular HMW ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"decreased cellular high molecular mass ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"decreased cellular high molecular weight ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"reduced cellular HMW ubiquitin conjugate level","type":"exact"}],"termid":"FYPO:0005001"}


id: PBO:0070303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 9","termid":"PBO:0070303"}


id: PBO:0080879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yippee like 4","termid":"PBO:0080879"}


id: GO:0036120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to platelet-derived growth factor","termid":"GO:0036119"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to platelet-derived growth factor stimulus","synonyms":[{"name":"cellular response to PDGF stimulus","type":"exact"}],"termid":"GO:0036120"}


id: MONDO:0007639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fundus albipunctatus is a rare, genetic retinal dystrophy characterized by the presence of numerous small, round, yellowish-white retinal lesions that are distributed throughout the retina but spare the fovea. Patients present in childhood with non-progressive night blindness with prolonged cone and rod adaptation times. The macula may or may not be involved, which may result in a decrease of central visual acuity with age.","definition_xrefs":["Orphanet:227796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial flecked retinopathy","termid":"MONDO:0016420"},{"relation_name":"is_a","term_name":"RDH5-related retinopathy","termid":"MONDO:0100443"},{"relation_name":"is_a","term_name":"RLBP1-related retinopathy","termid":"MONDO:0100444"},{"relation_name":"is_a","term_name":"PRPH2-related retinopathy","termid":"MONDO:1040055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"fundus albipunctatus","secondary_identifiers":["OMIM:136880","ICD9:362.74","DOID:11105","ICD10CM:H35.5","MESH:C562733","icd11.foundation:1981512475","GARD:13809","UMLS:C0311338","MEDGEN:86317","SCTID:68222009","ICD9:362.76"],"synonyms":[{"name":"fundus albipunctatus","type":"exact"},{"name":"pigmentary retinal dystrophy","type":"exact"},{"name":"retinitis punctata albescens","type":"broad"}],"termid":"MONDO:0007639","xrefs":{"Monarch":{"xref_id":"0007639"}}}


id: MONDO:0958095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Nodal T-follicular helper cell lymphoma, follicular type","secondary_identifiers":["UMLS:C2700204","MEDGEN:398050","Orphanet:652650","NCIT:C80375"],"termid":"MONDO:0958095","xrefs":{"Monarch":{"xref_id":"0958095"}}}


id: PBO:0070544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 10","termid":"PBO:0070544"}


id: PBO:0047528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 2","termid":"PBO:0047528"}


id: GO:0005634
data:
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