# terms

id: GO:0004598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidylamidoglycolate = peptidyl amide + glyoxylate.","definition_xrefs":["EC:4.3.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"peptidylamidoglycolate lyase activity","secondary_identifiers":["MetaCyc:PEPTIDYLAMIDOGLYCOLATE-LYASE-RXN","RHEA:20924"],"synonyms":[{"name":"HGAD","type":"related"},{"name":"PAL","type":"related"},{"name":"PGL","type":"related"},{"name":"alpha-hydroxyglycine amidating dealkylase activity","type":"related"},{"name":"peptidyl-alpha-hydroxyglycine alpha-amidating lyase activity","type":"related"},{"name":"peptidylamidoglycolate peptidylamide-lyase (glyoxylate-forming)","type":"related"},{"name":"peptidylamidoglycolate peptidylamide-lyase activity","type":"related"}],"termid":"GO:0004598"}


id: PBO:0067395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 500, pseudogene","termid":"PBO:0067395"}


id: MONDO:0007917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphedema-cerebral arteriovenous anomaly syndrome is characterized by the variable association of a cerebrovascular malformation, foot lymphoedema and primary pulmonary hypertension. It has been described in a woman and four of her children.","definition_xrefs":["Orphanet:86914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphedema-cerebral arteriovenous anomaly syndrome","secondary_identifiers":["GARD:9217","OMIM:152900","UMLS:C1835272","MESH:C563612","MEDGEN:322617"],"synonyms":[{"name":"lymphedema and cerebral arteriovenous anomaly","type":"related"},{"name":"primary pulmonary hypertension, cerebrovascular malformation and lymphedema feet","type":"related"}],"termid":"MONDO:0007917","xrefs":{"Monarch":{"xref_id":"0007917"}}}


id: GO:0005146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an leukemia inhibitory factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"leukemia inhibitory factor receptor binding","synonyms":[{"name":"leukemia inhibitory factor","type":"narrow"},{"name":"leukemia inhibitory factor receptor ligand","type":"narrow"}],"termid":"GO:0005146"}


id: PBO:0062607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 2","termid":"PBO:0062607"}


id: GO:0006699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bile acids, any of a group of steroid carboxylic acids occurring in bile.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid metabolic process","termid":"GO:0008206"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"bile acid biosynthetic process","secondary_identifiers":["Reactome:R-HSA-192105"],"synonyms":[{"name":"bile acid anabolism","type":"exact"},{"name":"bile acid biosynthesis","type":"exact"},{"name":"bile acid formation","type":"exact"},{"name":"bile acid synthesis","type":"exact"}],"termid":"GO:0006699"}


id: GO:0102332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: malonyl-CoA + H+ + a long-chain acyl-[acp] + a reduced electron acceptor = 2 carbon dioxide + coenzyme A + a terminal olefin + a holo-[acyl-carrier protein] + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete fatty-acyl-[acp] elongase/decarboxylase activity (obsolete GO:0102332)","termid":"GO:0102332"}


id: PBO:0071514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 17","termid":"PBO:0071514"}


id: PBO:0065004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 9","termid":"PBO:0065004"}


id: SO:0000795
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mini_gene that rescues.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"rescue","termid":"SO:0000814"},{"relation_name":"is_a","term_name":"mini_gene","termid":"SO:0000815"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue_mini_gene","synonyms":[{"name":"rescue mini gene","type":"exact"},{"name":"rescue mini-gene","type":"exact"}],"termid":"SO:0000795"}


id: GO:1905006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial to mesenchymal transition involved in endocardial cushion formation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl","GO_REF:0000058","PMID:18718461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062044"},{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:1905005"},{"relation_name":"negatively_regulates","term_name":"epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","synonyms":[{"name":"down regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"down-regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"downregulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"inhibition of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"narrow"}],"termid":"GO:1905006"}


id: GO:0031650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of heat generation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heat generation","termid":"GO:0031650"}


id: FYPO:0000485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"},{"relation_name":"is_a","term_name":"decreased DNA recombination","termid":"FYPO:0002712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased meiotic recombination","synonyms":[{"name":"meiotic recombination: decreased","type":"related"},{"name":"reduced meiotic recombination","type":"exact"}],"termid":"FYPO:0000485"}


id: PBO:0055052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2468","termid":"PBO:0055052"}


id: PBO:0054791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2204","termid":"PBO:0054791"}


id: GO:0016137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoside metabolic process","secondary_identifiers":["GO:0016140"],"synonyms":[{"name":"O-glycoside metabolic process","type":"exact"},{"name":"O-glycoside metabolism","type":"exact"},{"name":"glycoside metabolism","type":"exact"}],"termid":"GO:0016137"}


id: PBO:0078191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-1","termid":"PBO:0078191"}


id: GO:0070509
data:
  {"annotated_genes":["SJAG_05229","SJAG_01090","SJAG_04668","SJAG_03631","SJAG_02877","SJAG_00296","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66720,114181,92163,74206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[113107,90981],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[101898],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"The directed movement of calcium ions into a cell or organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"calcium ion import","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion uptake","type":"exact"},{"name":"transmembrane calcium influx","type":"related"}],"termid":"GO:0070509","terms_by_termid":{"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: GO:0072583
data:
  {"annotated_genes":["SJAG_02789","SJAG_01686","SJAG_04517","SJAG_05296","SJAG_03643","SJAG_01748","SJAG_05011","SJAG_02805","SJAG_01167","SJAG_03146","SJAG_00649","SJAG_04479","SJAG_05198","SJAG_04465","SJAG_00104","SJAG_00800","SJAG_03404","SJAG_04052","SJAG_03596","SJAG_00032","SJAG_04050","SJAG_00803","SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58381,73463,74161,77880,79442,91307,91971,92353,94653,96048,102492,105481,107811,108090,110437,111423,112057,112655,117266,118615],"is_not":false,"summary":null,"term":"GO:0072583"},{"annotations":[111415,110771,118598],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000369"}]},"cv_name":"biological_process","definition":"An endocytosis process that begins when material is taken up into clathrin-coated pits, which then pinch off to form clathrin-coated endocytic vesicles.","definition_xrefs":["PMID:18498251","GOC:BHF","GOC:mah","PMID:8970738","PMID:9234965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00032":null,"SJAG_00104":null,"SJAG_00649":null,"SJAG_00800":null,"SJAG_00803":null,"SJAG_01167":null,"SJAG_01686":null,"SJAG_01748":null,"SJAG_02282":null,"SJAG_02789":null,"SJAG_02805":null,"SJAG_03146":null,"SJAG_03404":null,"SJAG_03596":null,"SJAG_03643":null,"SJAG_04050":null,"SJAG_04052":null,"SJAG_04465":null,"SJAG_04479":null,"SJAG_04517":null,"SJAG_05011":null,"SJAG_05198":null,"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"clathrin-dependent endocytosis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CME","type":"exact"},{"name":"clathrin coated pit-dependent endocytosis","type":"exact"},{"name":"clathrin-mediated endocytosis","type":"exact"}],"termid":"GO:0072583","terms_by_termid":{"GO:0072583":null,"GO:2000369":null}}


id: MONDO:0011637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sener syndrome","secondary_identifiers":["OMIM:606156","MESH:C537579","UMLS:C1853616","MEDGEN:342924"],"synonyms":[{"name":"Sener syndrome","type":"exact"},{"name":"frontonasal dysplasia and dilated Virchow-Robin spaces","type":"related"},{"name":"polycystic brain (cerebrum polycystica vera) associated with ectodermal dysplasia","type":"related"}],"termid":"MONDO:0011637","xrefs":{"Monarch":{"xref_id":"0011637"}}}


id: SO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which alters the functioning of a transcript with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_function_variant","synonyms":[{"name":"transcript function variant","type":"exact"}],"termid":"SO:0001538"}


id: PBO:0083999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerol 3-phosphate/dihydroxyacetone phosphate sn-1 acyltransferase; dual substrate-specific acyltransferase of the glycerolipid biosynthesis pathway; prefers 16-carbon fatty acids; similar to Gpt2p; gene is constitutively transcribed","termid":"PBO:0083999"}


id: PBO:0079874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 1","termid":"PBO:0079874"}


id: PBO:0065381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSG8 antisense RNA 1","termid":"PBO:0065381"}


id: PBO:0030885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleic_acid_metabolism_phenotype_during_vegetative_growth","termid":"PBO:0030885"}


id: PBO:0061245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA activated by DNA damage","termid":"PBO:0061245"}


id: GO:1903405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a nuclear body.","definition_xrefs":["PMID:24713849","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleoplasm","termid":"GO:1990173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nuclear body","synonyms":[{"name":"protein localisation in nuclear body","type":"exact"},{"name":"protein localisation to nuclear body","type":"exact"},{"name":"protein localization in nuclear body","type":"exact"}],"termid":"GO:1903405"}


id: GO:0043246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Large, cysteine proteinase rich lysosomes, often found in the amastigote (an intracytoplasmic, nonflagellated form of the parasite) stage of Leishmania species belonging to the mexicana complex.","definition_xrefs":["PMID:11206117","PMID:1999020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"megasome","termid":"GO:0043246"}


id: FYPO:0002355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0002355"}


id: PBO:0111742
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLEYA domain","termid":"PBO:0111742"}


id: PBO:0073801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 7","termid":"PBO:0073801"}


id: PBO:0065905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabaptin, RAB GTPase binding effector protein 1","termid":"PBO:0065905"}


id: GO:0061472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process whereby karyomere membranes fuse during interphase to form a single lobed nucleus.","definition_xrefs":["GOC:dph","PMID:2734396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0061024","GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"karyomere membrane fusion","termid":"GO:0061472"}


id: PR:O94322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC725.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C725.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.03","synonyms":[{"name":"Spom972h-SPBC725.03","type":"exact"}],"termid":"PR:O94322"}


id: PBO:0041235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 74","termid":"PBO:0041235"}


id: GO:0048559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of the floral organs with reference to the central axis of the flower.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"establishment of plant organ orientation","termid":"GO:0090707"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of floral organ orientation","termid":"GO:0048559"}


id: GO:0070980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of biphenyl, a toxic aromatic hydrocarbon used as a heat transfer agent, as a fungistat in packaging citrus fruits and in plant disease control. Biphenyl can be chlorinated with 1-10 chlorine molecules to form polychlorinated biphenyls (PCBs).","definition_xrefs":["PMID:16310831","PMID:16339959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biphenyl metabolic process","termid":"GO:0018879"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biphenyl catabolic process","synonyms":[{"name":"biphenyl breakdown","type":"exact"},{"name":"biphenyl catabolism","type":"exact"},{"name":"biphenyl degradation","type":"exact"}],"termid":"GO:0070980"}


id: FYPO:0006639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal diameter (thickness; width).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal vegetative cell diameter","synonyms":[{"name":"normal cell diameter during vegetative growth","type":"exact"},{"name":"normal vegetative cell diameter during mitotic cell cycle","type":"related"},{"name":"normal vegetative cell thickness","type":"exact"},{"name":"normal vegetative cell width","type":"exact"}],"termid":"FYPO:0006639"}


id: MONDO:1011843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal hydrocephalus, non-human animal","secondary_identifiers":["OMIA:000489"],"termid":"MONDO:1011843","xrefs":{"Monarch":{"xref_id":"1011843"}}}


id: GO:0031203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the signal sequence of a translated protein binds to and forms a complex with the Sec complex.","definition_xrefs":["PMID:8707814","PMID:12518217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"post-translational protein targeting to endoplasmic reticulum membrane","termid":"GO:0006620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"post-translational protein targeting to membrane, docking","synonyms":[{"name":"Sec-translated protein complex assembly","type":"exact"},{"name":"posttranslational protein membrane targeting, docking","type":"exact"},{"name":"posttranslational protein targeting to membrane, docking","type":"exact"},{"name":"protein docking during posttranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0031203"}


id: PBO:0066479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFK pseudogene 6","termid":"PBO:0066479"}


id: PBO:0085090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome-associated nucleic acid binding protein; involved in RNA processing, surveillance, degradation, tethering, and export; forms a stable heterodimer with Rrp6p and regulates its exonucleolytic activity; rapidly degraded by the proteasome in the absence of Rrp6p; homolog of mammalian nuclear matrix protein C1D involved in regulation of DNA repair and recombination","termid":"PBO:0085090"}


id: PBO:0083045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxyhypusine hydroxylase; HEAT-repeat containing metalloenzyme that catalyzes hypusine formation; binds to and is required for the modification of Hyp2p (eIF5A); complements S. pombe mmd1 mutants defective in mitochondrial positioning; protein abundance increases in response to DNA replication stress","termid":"PBO:0083045"}


id: PBO:0087708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation","termid":"PBO:0087708"}


id: MONDO:0015477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pinnae fistula or cyst is a rare otorhinolaryngological malformation characterized by the presence of a, usually unilateral, sinus tract or cyst located in the vicinity of the auricle (most frequently identified by a small pit near the anterior margin of the first ascending portion of the helix). Typically, patients are asymptomatic and usually only present symptoms (pain, erythema, discharge from pit) in relation to infection. Renal and inner ear anomalies may be associated.","definition_xrefs":["Orphanet:155838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pinnae fistula or cyst","secondary_identifiers":["GARD:19974","MEDGEN:1842452","UMLS:C5680633"],"termid":"MONDO:0015477","xrefs":{"Monarch":{"xref_id":"0015477"}}}


id: PBO:0065405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 6 pseudogene 1","termid":"PBO:0065405"}


id: FYPO:0007111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule depolymerization","synonyms":[{"name":"abnormal microtubule catastrophe","type":"related"},{"name":"abnormal microtubule depolymerisation","type":"exact"},{"name":"abnormal microtubule shrinkage","type":"related"}],"termid":"FYPO:0007111"}


id: PATO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000179 body position (obsolete PATO:0000179)","termid":"PATO:0000179"}


id: PBO:0084093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Cdc42p; activates Cdc42p in early G1, accounting for the first stage of biphasic activation, with Cdc24p accounting for the second stage in late G1; involved in the Cdc42p-mediated assembly of the axial landmark that dictates the site for the next round of budding, resulting in the axial budding pattern observed in haploids; localizes with septins to the bud neck contractile ring in mitosis","termid":"PBO:0084093"}


id: PBO:0000552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L family cyclin (predicted)","termid":"PBO:0000552"}


id: PBO:0084650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor isoform of large subunit of ribonucleotide-diphosphate reductase; the RNR complex catalyzes rate-limiting step in dNTP synthesis, regulated by DNA replication and DNA damage checkpoint pathways via localization of small subunits; RNR3 has a paralog, RNR1, that arose from the whole genome duplication","termid":"PBO:0084650"}


id: MONDO:0016101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A transmissible viral disease of birds caused by avian herpesvirus 2 (herpesvirus 2, gallid) and other mardivirus. There is lymphoid cell infiltration or lymphomatous tumor formation in the peripheral nerves and gonads, but may also involve visceral organs, skin, muscle, and the eye.","definition_xrefs":["MESH:D008380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurolymphomatosis","secondary_identifiers":["MESH:D000077162","Orphanet:206586","SCTID:766752000","UMLS:C4553088","MEDGEN:1642312","GARD:20354","icd11.foundation:177999927"],"synonyms":[{"name":"Marek disease","type":"related"},{"name":"Marek's disease","type":"related"},{"name":"fowl paralyses","type":"related"},{"name":"fowl paralysis","type":"related"},{"name":"fowl paralyzes","type":"related"}],"termid":"MONDO:0016101","xrefs":{"Monarch":{"xref_id":"0016101"}}}


id: MONDO:0015730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 17 is a rare chromosomal anomaly syndrome, with a highly variable clinical presentation, mostly characterized by growth delay, intellectual disability, body asymmetry with leg length differentiation, scoliosis, and congenital heart anomalies (e.g. ventricular septal defect). Prenatal ultrasound findings include intrauterine growth retardation, nuchal thickening brain anomalies (e.g. cerebellar hypoplasia), pleural effusion and single umbilical artery. Patients with no associated malformations have also been reported.","definition_xrefs":["Orphanet:1711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 17 disorder","termid":"MONDO:0020583"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 17","secondary_identifiers":["GARD:5317","SCTID:764622004","NCIT:C37865","MEDGEN:202107","MESH:C538044","UMLS:C1096168"],"synonyms":[{"name":"Mosaic trisomy chromosome 17","type":"exact"},{"name":"Mosaic trisomy type 17","type":"exact"},{"name":"chromosome 17 duplication","type":"related"},{"name":"chromosome 17 trisomy","type":"related"},{"name":"chromosome 17, trisomy","type":"related"},{"name":"chromosome 17, trisomy mosaicism","type":"related"},{"name":"trisomy 17","type":"related"},{"name":"trisomy 17 mosaicism","type":"exact"}],"termid":"MONDO:0015730","xrefs":{"Monarch":{"xref_id":"0015730"}}}


id: PBO:0088054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein of the SUMO family; conjugated to lysine residues of target proteins; associates with transcriptionally active genes; regulates chromatid cohesion, chromosome segregation, APC-mediated proteolysis, DNA replication and septin ring dynamics; human homolog SUMO1 can complement yeast null mutant","termid":"PBO:0088054"}


id: PBO:0038887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADCYAP receptor type I","termid":"PBO:0038887"}


id: PBO:0088092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetyl-glucosamine-1-P transferase; transfers Glc-Nac-P from UDP-GlcNac to Dol-P in the ER in the first step of the dolichol pathway of protein asparagine-linked glycosylation; inhibited by tunicamycin; human homolog DPAGT1 can complement yeast ALG7 mutant","termid":"PBO:0088092"}


id: PBO:0028154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_epirubicin","termid":"PBO:0028154"}


id: MONDO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of the glomus tumor characterized by the presence of dilated veins, surrounded by small clusters of glomus cells. Glomangiomas are most often present in patients with multiple lesions.","definition_xrefs":["NCIT:C4222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomus tumor","termid":"MONDO:0018327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomangioma","secondary_identifiers":["MEDGEN:87239","DOID:2436","ICDO:8712/0","UMLS:C0334421"],"synonyms":[{"name":"glomangioma","type":"exact"}],"termid":"MONDO:0002299","xrefs":{"Monarch":{"xref_id":"0002299"}}}


id: MONDO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the fallopian tube. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C40128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube cancer","termid":"MONDO:0002158"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube leiomyosarcoma","secondary_identifiers":["UMLS:C1517116","MEDGEN:274488","DOID:1965"],"synonyms":[{"name":"fallopian tube leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of fallopian tube","type":"exact"}],"termid":"MONDO:0002159","xrefs":{"Monarch":{"xref_id":"0002159"}}}


id: MONDO:0030961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Olmsted syndrome","termid":"MONDO:0031421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Olmsted syndrome 2","secondary_identifiers":["GARD:16437","MEDGEN:1779902","OMIM:619208","UMLS:C5543096"],"synonyms":[{"name":"OLMS2","type":"exact"},{"name":"Olmsted syndrome 2","type":"exact"},{"name":"palmoplantar keratoderma, mutilating, with periorificial keratotic plaques 2","type":"exact"}],"termid":"MONDO:0030961","xrefs":{"Monarch":{"xref_id":"0030961"}}}


id: PBO:0005603
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.2.1.1","termid":"PBO:0005603"}


id: PBO:0046671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen related receptor beta","termid":"PBO:0046671"}


id: PBO:0061659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUMB like endocytic adaptor protein","termid":"PBO:0061659"}


id: PBO:0087648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; required for assembly and DNA binding activity of the complex","termid":"PBO:0087648"}


id: GO:0098548
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the Golgi membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"cytoplasmic side of Golgi membrane","termid":"GO:0098548"}


id: GO:0019463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glycine into other compounds, including creatine.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine catabolic process to creatine (obsolete GO:0019463)","synonyms":[{"name":"glycine breakdown to creatine","type":"exact"},{"name":"glycine degradation to creatine","type":"exact"}],"termid":"GO:0019463"}


id: GO:0010047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the spontaneous opening of the fruit permitting the escape of seeds.","definition_xrefs":["ISBN:0471245208","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehiscence","termid":"GO:0009900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit dehiscence","termid":"GO:0010047"}


id: FYPO:0002466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and cells with abnormal morphology (i.e. size, shape, or structure). The cells with normal morphology arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and cells with abnormal morphology (obsolete FYPO:0002466)","termid":"FYPO:0002466"}


id: PBO:0060182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 3A, cell surface associated","termid":"PBO:0060182"}


id: MONDO:0019236
data:
  {"annotated_genes":["SJAG_03797","SJAG_03811","SJAG_02850","SJAG_04681","SJAG_01859","SJAG_01359","SJAG_04882","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013869"},{"annotations":[85237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007068"},{"annotations":[86373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012099"},{"annotations":[85957,85958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010699"},{"annotations":[85786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014719"},{"annotations":[85939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010299"},{"annotations":[85938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010298"},{"annotations":[87013,87012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010395"},{"annotations":[86258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013171"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of purine nucleobase metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of purine or pyrimidine metabolism","termid":"MONDO:0019254"},{"relation_name":"is_a","term_name":"purine metabolism disease","termid":"MONDO:0037829"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01359":null,"SJAG_01859":null,"SJAG_02850":null,"SJAG_03797":null,"SJAG_03811":null,"SJAG_04681":null,"SJAG_04882":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"inborn disorder of purine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10061476","GARD:18965","Orphanet:79191","icd11.foundation:1958565793"],"synonyms":[{"name":"disorder of purine metabolism","type":"related"},{"name":"inborn error of purine nucleobase metabolic process","type":"exact"},{"name":"inborn purine nucleobase metabolic process disorder","type":"exact"},{"name":"rare inborn error of purine nucleobase metabolic process","type":"exact"}],"termid":"MONDO:0019236","terms_by_termid":{"MONDO:0007068":null,"MONDO:0010298":null,"MONDO:0010299":null,"MONDO:0010395":null,"MONDO:0010699":null,"MONDO:0012099":null,"MONDO:0013171":null,"MONDO:0013869":null,"MONDO:0014719":null},"xrefs":{"Monarch":{"xref_id":"0019236"}}}


id: PBO:0056435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 8","termid":"PBO:0056435"}


id: PBO:0083178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the characterized snoRNA gene snR73","termid":"PBO:0083178"}


id: MONDO:0016139
data:
  {"annotated_genes":["SJAG_03379","SJAG_03703","SJAG_04887","SJAG_04316","SJAG_03025","SJAG_03145","SJAG_02431","SJAG_01491","SJAG_04167","SJAG_00185","SJAG_04053","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[86437,86438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[85719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[85316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010977"},{"annotations":[85061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[85109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800341"},{"annotations":[84935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012239"},{"annotations":[85655,85654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[85626,85625,85624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[85712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[86432,86431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[86436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[85717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[86434,86435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"},{"annotations":[85033,85032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008050"},{"annotations":[85248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009709"},{"annotations":[86494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009725"},{"annotations":[85639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012538"},{"annotations":[85570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014800"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_01491":null,"SJAG_02431":null,"SJAG_03025":null,"SJAG_03145":null,"SJAG_03188":null,"SJAG_03379":null,"SJAG_03703":null,"SJAG_04053":null,"SJAG_04167":null,"SJAG_04316":null,"SJAG_04887":null},"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative protein defects in neuromuscular diseases","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20388","MEDGEN:1842598","Orphanet:207049","UMLS:C5680807"],"termid":"MONDO:0016139","terms_by_termid":{"MONDO:0008050":null,"MONDO:0008070":null,"MONDO:0008409":null,"MONDO:0009364":null,"MONDO:0009709":null,"MONDO:0009725":null,"MONDO:0010977":null,"MONDO:0012239":null,"MONDO:0012248":null,"MONDO:0012538":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null,"MONDO:0014800":null,"MONDO:0800341":null},"xrefs":{"Monarch":{"xref_id":"0016139"}}}


id: GO:1902330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in bacterial-type DNA replication (obsolete GO:1902330)","synonyms":[{"name":"replication priming involved in bacterial-type DNA replication","type":"related"}],"termid":"GO:1902330"}


id: GO:1903306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["PMID:12526776","GOC:pad","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"negatively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of regulated secretory pathway","synonyms":[{"name":"down regulation of regulated secretory pathway","type":"exact"},{"name":"down-regulation of regulated secretory pathway","type":"exact"},{"name":"downregulation of regulated secretory pathway","type":"exact"},{"name":"inhibition of regulated secretory pathway","type":"narrow"}],"termid":"GO:1903306"}


id: _global:involved_in_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"involved_in_or_involved_in_regulation_of","termid":"_global:involved_in_or_involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_regulation_of","secondary_identifiers":["RO:0002428"],"termid":"_global:involved_in_regulation_of"}


id: PBO:0087083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L43A; null mutation confers a dominant lethal phenotype; homologous to mammalian ribosomal protein L37A, no bacterial homolog; RPL43A has a paralog, RPL43B, that arose from the whole genome duplication","termid":"PBO:0087083"}


id: PBO:0060199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC20 overlapping transcript","termid":"PBO:0060199"}


id: PBO:0071474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 15","termid":"PBO:0071474"}


id: GO:0060344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the liver. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"liver trabecula formation","synonyms":[{"name":"liver trabecula biogenesis","type":"related"},{"name":"liver trabeculation","type":"exact"}],"termid":"GO:0060344"}


id: MONDO:0012320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial or sporadic hemiplegic migraine in which the cause of the disease is a mutation in the SCN1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemiplegic migraine","termid":"MONDO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine, familial hemiplegic, 3","secondary_identifiers":["OMIM:609634","GARD:10974","DOID:0111183","MESH:C566500","UMLS:C1864987","MEDGEN:400655"],"synonyms":[{"name":"FHM3","type":"related"},{"name":"SCN1A familial or sporadic hemiplegic migraine","type":"exact"},{"name":"familial or sporadic hemiplegic migraine caused by mutation in SCN1A","type":"exact"},{"name":"migraine, familial hemiplegic, 3","type":"exact"},{"name":"migraine, familial hemiplegic, type 3","type":"exact"}],"termid":"MONDO:0012320","xrefs":{"Monarch":{"xref_id":"0012320"}}}


id: GO:0019002
data:
  {"annotated_genes":["SJAG_00044","SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88647,115431],"is_not":false,"summary":null,"term":"GO:0019002"}]},"cv_name":"molecular_function","definition":"Binding to GMP, guanosine monophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"GMP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019002","terms_by_termid":{"GO:0019002":null}}


id: PBO:0046463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equatorin","termid":"PBO:0046463"}


id: MONDO:1010627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chediak-Higashi syndrome that occurs in American mink.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chediak-Higashi syndrome, non-human animal","termid":"MONDO:1010070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome, American mink","secondary_identifiers":["OMIA:000185-452646"],"termid":"MONDO:1010627","xrefs":{"Monarch":{"xref_id":"1010627"}}}


id: PBO:0002727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, nucleoporin Nup37 (predicted)","termid":"PBO:0002727"}


id: GO:0031910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stable, specialized structure for the ingestion of food by the cell into phagosomes.","definition_xrefs":["PMID:10503189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cytostome","secondary_identifiers":["Wikipedia:Cytostome"],"termid":"GO:0031910"}


id: FYECO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which xylose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose added","termid":"FYECO:0000402"}


id: MONDO:0012054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation on chromosome 1p36.2.","definition_xrefs":["DOID:0070088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 12","secondary_identifiers":["UMLS:C1837893","MEDGEN:373838","OMIM:608543"],"synonyms":[{"name":"SCZD12","type":"exact"},{"name":"Sczd12","type":"related"},{"name":"schizophrenia 12","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 1P-related","type":"related"},{"name":"schizophrenia type 12","type":"exact"}],"termid":"MONDO:0012054","xrefs":{"Monarch":{"xref_id":"0012054"}}}


id: PBO:0110197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitocondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0110197"}


id: GO:0140194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of an adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0140194)","termid":"GO:0140194"}


id: PBO:0074332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 divergent transcript","termid":"PBO:0074332"}


id: PATO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's shape resembling falling drop.","definition_xrefs":["url:wordnetweb.princeton.edu/perl/webwn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teardrop-shaped","synonyms":[{"name":"drop shaped","type":"exact"}],"termid":"PATO:0002240"}


id: PBO:0005690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex28/29 (predicted)","termid":"PBO:0005690"}


id: PR:P54789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An origin recognition complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.15","secondary_identifiers":["UniProtKB:P54789"],"synonyms":[{"name":"SPBC29A10.15","type":"related"},{"name":"Spom972h-ORC1","type":"exact"},{"name":"orp1","type":"related"}],"termid":"PR:P54789"}


id: MONDO:0006940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral nerve lesion that involves the radial nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial neuropathy","termid":"MONDO:0001459"},{"relation_name":"is_a","term_name":"neuritis of upper limb","termid":"MONDO:0003607"},{"relation_name":"is_a","term_name":"brachial plexus neuritis","termid":"MONDO:0006682"},{"relation_name":"is_a","term_name":"peripheral nerve lesion","termid":"MONDO:0024334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"radial nerve lesion","secondary_identifiers":["UMLS:C0154744","EFO:1001143","MEDGEN:102317","SCTID:193137006","MedDRA:10061477","DOID:12170","ICD9:354.3"],"synonyms":[{"name":"lesion of radial nerve","type":"exact"},{"name":"peripheral nerve lesion of radial nerve","type":"exact"},{"name":"radial nerve lesions","type":"exact"},{"name":"radial nerve peripheral nerve lesion","type":"exact"}],"termid":"MONDO:0006940","xrefs":{"Monarch":{"xref_id":"0006940"}}}


id: MONDO:0003765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from leptomeningeal melanocytes and occurs in adulthood.","definition_xrefs":["NCIT:C5319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leptomeningeal melanoma","termid":"MONDO:0003761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult leptomeningeal melanoma","secondary_identifiers":["UMLS:C1332204","DOID:6090","MEDGEN:231042"],"synonyms":[{"name":"adult leptomeningeal melanoma","type":"exact"},{"name":"adult meningeal melanoma","type":"exact"},{"name":"melanoma of adult leptomeninges","type":"exact"},{"name":"melanoma of the adult leptomeninges","type":"related"}],"termid":"MONDO:0003765","xrefs":{"Monarch":{"xref_id":"0003765"}}}


id: GO:0090464
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96370],"is_not":false,"summary":null,"term":"GO:0090464"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of histidine within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular histidine homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular histidine homeostasis","type":"exact"},{"name":"histidine homeostasis","type":"exact"}],"termid":"GO:0090464","terms_by_termid":{"GO:0090464":null}}


id: GO:0062144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-amino-4-chloropent-4-enoate = chloride + H+ + L-propargylglycine.","definition_xrefs":["PMID:30867596","RHEA:59892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"L-propargylglycine synthase activity","termid":"GO:0062144"}


id: MONDO:0009289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease IC (obsolete MONDO:0009289)","termid":"MONDO:0009289","xrefs":{"Monarch":{"xref_id":"0009289"}}}


id: PBO:0068483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 64, pseudogene","termid":"PBO:0068483"}


id: PBO:0077535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 248","termid":"PBO:0077535"}


id: MONDO:0017590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the ampulla of Vater. The vast majority of cases are adenocarcinomas. Signs and symptoms include jaundice, abdominal pain, anorexia, nausea, vomiting, and weight loss.","definition_xrefs":["NCIT:C3908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ampulla of vater cancer","termid":"MONDO:0000919"},{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"},{"relation_name":"is_a","term_name":"carcinoma of duodenum","termid":"MONDO:0021335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma of the ampulla of vater","secondary_identifiers":["SCTID:254609000","GARD:21237","UMLS:C0262401","icd11.foundation:267067189","MedDRA:10048853","ONCOTREE:AMPCA","EFO:1000079","DOID:4932","MEDGEN:120461","Orphanet:300557"],"synonyms":[{"name":"AMPCA","type":"related"},{"name":"Ampulloma","type":"exact"},{"name":"ampulla of Vater cancer","type":"exact"},{"name":"ampulla of Vater carcinoma","type":"exact"},{"name":"ampullary cancer","type":"exact"},{"name":"ampullary carcinoma","type":"exact"},{"name":"carcinoma of ampulla of vater","type":"exact"},{"name":"carcinoma of hepatopancreatic ampulla","type":"exact"},{"name":"hepatopancreatic ampulla carcinoma","type":"exact"}],"termid":"MONDO:0017590","xrefs":{"Monarch":{"xref_id":"0017590"}}}


id: PBO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase inhibitor associated with endocytosis (predicted)","termid":"PBO:0001317"}


id: GO:0102606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyclooctat-9-en-7-ol + O2 + NADPH + H+ = cyclooctat-9-en-5,7-diol + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete octat-9-en-7-ol 5-monooxygenase activity (obsolete GO:0102606)","termid":"GO:0102606"}


id: PBO:0000117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0321 family protein 3","termid":"PBO:0000117"}


id: PBO:0029507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spore_with_abnormal_shape","termid":"PBO:0029507"}


id: GO:0009201
data:
  {"annotated_genes":["SJAG_02105","SJAG_MIT15","SJAG_03708","SJAG_02564","SJAG_01471","SJAG_03925","SJAG_00985","SJAG_02598","SJAG_04849","SJAG_01298","SJAG_04422","SJAG_00133","SJAG_02887","SJAG_00533","SJAG_MIT09","SJAG_03114","SJAG_05024","SJAG_00915","SJAG_00836","SJAG_00438","SJAG_07003","SJAG_00542","SJAG_05204","SJAG_04122","SJAG_MIT37"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[64501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[92734,67733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[101991,64499,74818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[117745],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[67175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[88889,118801,101571,93050,104771,103434,94602,115588,118812,102787,103405,108543,92618,93632,107654,118807,107562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[64500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate metabolic process","termid":"GO:0009199"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00533":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03708":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04849":null,"SJAG_05024":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ribonucleoside triphosphate anabolism","type":"exact"},{"name":"ribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"ribonucleoside triphosphate formation","type":"exact"},{"name":"ribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009201","terms_by_termid":{"GO:0006183":null,"GO:0006228":null,"GO:0006241":null,"GO:0015986":null,"GO:0042776":null,"GO:0044210":null,"GO:0044211":null,"GO:1905707":null}}


id: GO:0071921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The protein localization to chromatin by which a cohesin ring complex is topologically linked to DNA.","definition_xrefs":["PMID:17113138","GOC:vw","PMID:10882066","PMID:26687354","GOC:mah","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cohesin loading (obsolete GO:0071921)","synonyms":[{"name":"cohesin association with chromatin","type":"exact"},{"name":"cohesin localisation to chromatin","type":"exact"},{"name":"cohesin localization to chromatin","type":"exact"}],"termid":"GO:0071921"}


id: PBO:0047941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(14)(q23)","termid":"PBO:0047941"}


id: PBO:0029158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_level","termid":"PBO:0029158"}


id: PBO:0039993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 8A","termid":"PBO:0039993"}


id: GO:0009462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome in which the prosthetic group is a tetrapyrrolic chelate of iron in which the degree of conjugation of double bonds is less than in porphyrin. This definition would appear to include siroheme proteins (e.g. nitrite and sulfite reductases), but these are not cytochromes.","definition_xrefs":["GOC:kd","PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome d (obsolete GO:0009462)","synonyms":[{"name":"cytochrome d","type":"exact"}],"termid":"GO:0009462"}


id: PBO:0042455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 small effector 1","termid":"PBO:0042455"}


id: PBO:0091385
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAs-Like","termid":"PBO:0091385"}


id: PBO:0078589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 2, Y-linked","termid":"PBO:0078589"}


id: PBO:0051986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Janus kinase 2","termid":"PBO:0051986"}


id: MONDO:0034668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete terminal transverse limb defect (obsolete MONDO:0034668)","secondary_identifiers":["Orphanet:498461"],"termid":"MONDO:0034668","xrefs":{"Monarch":{"xref_id":"0034668"}}}


id: PBO:0055620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3059","termid":"PBO:0055620"}


id: PBO:0039056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 5","termid":"PBO:0039056"}


id: PBO:0087092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L8A; required for processing of 27SA3 pre-rRNA to 27SB during assembly of large subunit; binds Domain I of 25S, 5.8 S rRNAs; mutation results in decreased amounts of free 60S subunits; RPL8A has paralog RPL8B from whole genome duplication; RPL8A or RPL8B ribosomes not functionally interchangeable; proportions of Rpl8ap, Rpl8bp in 80S ribosome differ in glucose and glycerol; homologous to mammalian ribosomal protein L7A, no bacterial homolog","termid":"PBO:0087092"}


id: PBO:0034066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-part_of_developmental_precursor_of","termid":"PBO:0034066"}


id: GO:0006448
data:
  {"annotated_genes":["SJAG_02812","SJAG_00579","SJAG_05000","SJAG_02189","SJAG_04452","SJAG_03677","SJAG_04756"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"},{"annotations":[68356,65978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[109239,109903,95220,113714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or accuracy of translational elongation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"regulates","term_name":"translational elongation","termid":"GO:0006414"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_02189":null,"SJAG_02812":null,"SJAG_03677":null,"SJAG_04452":null,"SJAG_04756":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0006448","terms_by_termid":{"GO:0045901":null,"GO:0140018":null,"GO:2001125":null}}


id: PBO:0044815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108D (pseudogene)","termid":"PBO:0044815"}


id: PBO:0086052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function required for oxidative damage resistance; required for normal levels of resistance to oxidative damage; null mutants are sensitive to hydrogen peroxide; member of a conserved family of proteins found in eukaryotes","termid":"PBO:0086052"}


id: PBO:0060501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4","termid":"PBO:0060501"}


id: PBO:0042599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 15","termid":"PBO:0042599"}


id: GO:0072344
data:
  {"annotated_genes":["SJAG_01497","SJAG_00188","SJAG_03428","SJAG_05000","SJAG_00898","SJAG_03189","SJAG_02746","SJAG_01074","SJAG_02096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64313,69550,75048,76350,77946,102883,105399,115831],"is_not":false,"summary":null,"term":"GO:0072344"},{"annotations":[114150],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"}]},"cv_name":"biological_process","definition":"A process of translational elongation that takes place when a ribosome has stalled during translation, and results in freeing the ribosome from the stalled translation complex.","definition_xrefs":["GOC:jh2","PMID:18557701","PMID:20117091","GOC:mah","PMID:20185543","PMID:19170872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"is_a","term_name":"ribosome disassembly","termid":"GO:0032790"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03189":null,"SJAG_03428":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"rescue of stalled ribosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0072344","terms_by_termid":{"GO:0072344":null,"GO:0140708":null}}


id: PBO:0070913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 21","termid":"PBO:0070913"}


id: MONDO:0100119
data:
  {"annotated_genes":["SJAG_02878","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86919,86920],"is_not":false,"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Knobloch syndrome","termid":"MONDO:0800166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"Knobloch syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5676897","MEDGEN:1812153","OMIM:618458"],"termid":"MONDO:0100119","terms_by_termid":{"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0100119"}}}


id: GO:0140413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: zinc(out) + HCO3-(out) + HO3Se-(out) = zinc(in) + HCO3-(in) + HO3Se-(out).","definition_xrefs":["PMID:27166256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"zinc:bicarbonate symporter activity","termid":"GO:0140412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"zinc:bicarbonate:selenite symporter activity","synonyms":[{"name":"zinc:hydrogencarbonate:selenate symporter activity","type":"exact"}],"termid":"GO:0140413"}


id: GO:2000155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cilium-dependent cell motility.","definition_xrefs":["GOC:cilia","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium-dependent cell motility","termid":"GO:1902019"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"positively_regulates","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium-dependent cell motility","synonyms":[{"name":"positive regulation of ciliary cell motility","type":"related"}],"termid":"GO:2000155"}


id: MONDO:0013630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the B9D1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 9","secondary_identifiers":["MEDGEN:481785","UMLS:C3280155","GARD:15773","OMIM:614209"],"synonyms":[{"name":"B9D1 Meckel syndrome","type":"exact"},{"name":"MKS9","type":"related"},{"name":"Meckel syndrome caused by mutation in B9D1","type":"exact"},{"name":"Meckel syndrome, type 9","type":"exact"},{"name":"meckel syndrome 9","type":"exact"}],"termid":"MONDO:0013630","xrefs":{"Monarch":{"xref_id":"0013630"}}}


id: PBO:0076450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tafazzin, phospholipid-lysophospholipid transacylase","termid":"PBO:0076450"}


id: PBO:0031644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_septation","termid":"PBO:0031644"}


id: GO:0103061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP(4-) + H2O + a trans-methoxy-C60-meroacyl-[acp] = diphosphoric acid + a trans-methoxy-meroacyl-adenylate + a holo-[acyl-carrier protein].","definition_xrefs":["PMID:15042094","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-methoxy-C60-meroacyl-AMP ligase activity (obsolete GO:0103061)","termid":"GO:0103061"}


id: PBO:0088552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gpl1-Gih35-Wdr83 complex WD repeat subunit Wdr83","termid":"PBO:0088552"}


id: MONDO:0019105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, syndromic renal disease characterized by the entrapment of left renal vein (LRV) between the superior mesenteric artery (SMA) and the abdominal aorta, resulting in increased luminal pressure, renal hilar varices, hematuria and, at the microscopic level, rupture of thin-walled veins into the collecting system in renal fornices.","definition_xrefs":["Orphanet:71273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal nutcracker syndrome","secondary_identifiers":["UMLS:C3178770","GARD:11971","SCTID:717267005","EFO:1001838","MEDGEN:465238","MESH:D059228"],"synonyms":[{"name":"RNS","type":"exact"},{"name":"left renal vein entrapment syndrome","type":"exact"},{"name":"nutcracker syndrome","type":"related"}],"termid":"MONDO:0019105","xrefs":{"Monarch":{"xref_id":"0019105"}}}


id: GO:1902393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of exodeoxyribonuclease activity.","definition_xrefs":["GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of exodeoxyribonuclease activity (obsolete GO:1902393)","synonyms":[{"name":"down regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of exodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of exodeoxyribonuclease activity","type":"narrow"}],"termid":"GO:1902393"}


id: MONDO:0019576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"maculopapular cutaneous mastocytosis","termid":"MONDO:0019316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"telangiectasia macularis eruptiva perstans","secondary_identifiers":["MEDGEN:78094","GARD:19136","SCTID:8214000","icd11.foundation:444226072","UMLS:C0263402","Orphanet:90389","MedDRA:10043192","ICD9:448.9"],"termid":"MONDO:0019576","xrefs":{"Monarch":{"xref_id":"0019576"}}}


id: GO:0140290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of ADP-ribose from ADP-ribosylserine.","definition_xrefs":["PMID:28650317","PMID:29234005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein de-ADP-ribosylation","termid":"GO:0051725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine ADP-deribosylation","termid":"GO:0140290"}


id: GO:0051683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the Golgi to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi localization","termid":"GO:0051645"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of Golgi localization","synonyms":[{"name":"establishment of Golgi apparatus localization","type":"exact"},{"name":"establishment of Golgi body localization","type":"exact"},{"name":"establishment of Golgi localisation","type":"exact"}],"termid":"GO:0051683"}


id: PBO:0108927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCSER2 pseudogene 1","termid":"PBO:0108927"}


id: FYPO:0006443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of amino acid biosynthesis genes from RNA polymerase II promoters occurs to a lower extent than normal. Amino acid biosynthesis genes are those whose products are involved in amino acid biosynthetic processes.","definition_xrefs":["PomBase:mah","PMID:29432178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased transcription of amino acid biosynthesis genes","synonyms":[{"name":"decreased transcription of amino acid biosynthesis genes during mitotic cell cycle","type":"related"},{"name":"decreased transcription of amino acid biosynthesis genes during vegetative growth","type":"exact"},{"name":"decreased transcription of amino acid biosynthesis genes from RNA pol II promoter","type":"exact"},{"name":"reduced transcription of amino acid biosynthesis genes","type":"exact"}],"termid":"FYPO:0006443"}


id: PBO:0029188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enlarged_exocytic_vesicles_present_in_increased_numbers","termid":"PBO:0029188"}


id: PBO:0002996
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene reporter system","termid":"PBO:0002996"}


id: GO:0044344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an fibroblast growth factor stimulus.","definition_xrefs":["GOC:jl","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to fibroblast growth factor","termid":"GO:0071774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fibroblast growth factor stimulus","synonyms":[{"name":"cellular response to FGF stimulus","type":"exact"}],"termid":"GO:0044344"}


id: GO:0034474
data:
  {"annotated_genes":["SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101926],"is_not":false,"summary":null,"term":"GO:0034474"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a U2 snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 3'-end processing","termid":"GO:0034472"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016073","GO:0010467"],"is_obsolete":false,"name":"U2 snRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"U2 snRNA 3' end processing","type":"exact"}],"termid":"GO:0034474","terms_by_termid":{"GO:0034474":null}}


id: GO:0072217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of metanephros development. Metanephros development is the process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"negatively_regulates","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephros development","termid":"GO:0072217"}


id: PBO:0074489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snail family transcriptional repressor 1","termid":"PBO:0074489"}


id: GO:1901969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of polynucleotide 3'-phosphatase activity.","definition_xrefs":["PMID:23316050","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of polynucleotide 3'-phosphatase activity (obsolete GO:1901969)","synonyms":[{"name":"activation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"activation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"activation of DNA 3'-phosphatase activity","type":"exact"},{"name":"activation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"activation of polynucleotide 3'-phosphatase activity","type":"narrow"},{"name":"activation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"positive regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"positive regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"up regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"up regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"up regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"up regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"up regulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"up regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"up-regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"up-regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"upregulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"upregulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"upregulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"upregulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"upregulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"upregulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"}],"termid":"GO:1901969"}


id: PBO:0050811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUS1 checkpoint clamp component B","termid":"PBO:0050811"}


id: PR:O59802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol N-acetylglucosaminyltransferase subunit C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04589","PANTHER:PTHR12982:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.04c","secondary_identifiers":["UniProtKB:O59802"],"synonyms":[{"name":"Spom972h-PIGC","type":"exact"}],"termid":"PR:O59802"}


id: PBO:0068001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 303","termid":"PBO:0068001"}


id: PBO:0071697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 3","termid":"PBO:0071697"}


id: SO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby the gene product has diminished or abolished function.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loss_of_function_variant","synonyms":[{"name":"loss of function variant","type":"exact"}],"termid":"SO:0002054"}


id: MONDO:0019096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare pulmonary hypertension.","gene_count":0,"genotype_count":0,"name":"obsolete rare pulmonary hypertension (obsolete MONDO:0019096)","secondary_identifiers":["Orphanet:71198"],"synonyms":[{"name":"rare pulmonary hypertension","type":"exact"}],"termid":"MONDO:0019096","xrefs":{"Monarch":{"xref_id":"0019096"}}}


id: PBO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.1","termid":"PBO:0000393"}


id: PBO:0044601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCAF8 divergent transcript","termid":"PBO:0044601"}


id: PBO:0048682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 1","termid":"PBO:0048682"}


id: GO:0016466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in archae.","definition_xrefs":["TC:3.A.2.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating A-type ATPase activity (obsolete GO:0016466)","synonyms":[{"name":"hydrogen-translocating A-type ATPase activity","type":"exact"},{"name":"proton-translocating A-type ATPase activity","type":"exact"}],"termid":"GO:0016466"}


id: GO:0002853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell mediated cytotoxicity directed against a tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated cytotoxicity","termid":"GO:0001915"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immune response to tumor cell","termid":"GO:0002841"},{"relation_name":"is_a","term_name":"regulation of T cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002852"},{"relation_name":"negatively_regulates","term_name":"T cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"down regulation of T cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"down-regulation of T cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"downregulation of T cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"inhibition of T cell mediated cytotoxicity directed against tumor cell target","type":"narrow"}],"termid":"GO:0002853"}


id: GO:0019456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cysteine transaminase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006520","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using cysteine transaminase","synonyms":[{"name":"L-cysteine breakdown via cystine, using cysteine transaminase","type":"exact"},{"name":"L-cysteine degradation via cystine, using cysteine transaminase","type":"exact"}],"termid":"GO:0019456"}


id: MONDO:1012483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"exercise-induced pulmonary hemorrhage, non-human animal","termid":"MONDO:1011704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exercise-induced pulmonary hemorrhage, horse","secondary_identifiers":["OMIA:001896-9796"],"termid":"MONDO:1012483","xrefs":{"Monarch":{"xref_id":"1012483"}}}


id: PBO:0029266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029266"}


id: PR:O14228
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoribosylformylglycinamidine synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10099:SF0","PRO:DNx","OMA:SCHPO00539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.10c","secondary_identifiers":["UniProtKB:O14228"],"synonyms":[{"name":"FGAM synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FGAMS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FGAR amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FGAR-AT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PFAS","type":"exact"},{"name":"formylglycinamide ribonucleotide amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"formylglycinamide ribotide amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14228"}


id: MONDO:0015731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High anorectal malformation is a rare, genetic, non-syndromic subtype of anorectal malformation, resulting from a developmental defect during embryogenesis, characterized by a wide spectrum of anorectal anomalies, with or without a rectourogenital fistula, located above the pubococcygeal line (i.e. anorectal agenesis, rectal agenesis, atresia, or stenosis). Patients may present with meconuria, pyuria, strangury, and fecal and urinary incontinence.","definition_xrefs":["Orphanet:171201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high anorectal malformation","secondary_identifiers":["UMLS:C0345210","MEDGEN:576820","icd11.foundation:1409973552","SCTID:253771003","ICD9:751.5"],"termid":"MONDO:0015731","xrefs":{"Monarch":{"xref_id":"0015731"}}}


id: MONDO:0005025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the endocardium.","definition_xrefs":["NCIT:C34582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardium disorder","termid":"MONDO:0000470"},{"relation_name":"is_a","term_name":"inflammation of heart layer","termid":"MONDO:0024636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"endocarditis","secondary_identifiers":["MEDGEN:4940","HP:0100584","ICD9:421.9","MESH:D004696","ICD9:424.99","SCTID:56819008","DOID:10314","EFO:0000465","UMLS:C0014118"],"synonyms":[{"name":"endocarditis","type":"exact"},{"name":"endocarditis (disease)","type":"exact"},{"name":"endocardium inflammation","type":"exact"},{"name":"inflammation of endocardium","type":"exact"}],"termid":"MONDO:0005025","xrefs":{"Monarch":{"xref_id":"0005025"}}}


id: GO:0010622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of an ovule is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"plant ovule morphogenesis","termid":"GO:0048482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of ovule identity","termid":"GO:0010622"}


id: GO:0008990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N2-methylguanine.","definition_xrefs":["PMID:17389639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"rRNA (guanine-N2-)-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07234"],"synonyms":[{"name":"S-adenosyl-L-methionine:rRNA (guanine-2-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (guanine-N2-)-methyltransferase activity","type":"related"},{"name":"ribosomal ribonucleate guanine-2-methyltransferase activity","type":"related"}],"termid":"GO:0008990"}


id: PR:Q10102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18G6.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18G6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.01c","synonyms":[{"name":"Spom972h-SPAC18G6.01c","type":"exact"}],"termid":"PR:Q10102"}


id: PBO:0083844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exopolyphosphatase; hydrolyzes inorganic polyphosphate (poly P) into Pi residues; located in the cytosol, plasma membrane, and mitochondrial matrix","termid":"PBO:0083844"}


id: GO:0006970
data:
  {"annotated_genes":["SJAG_04567","SJAG_04205","SJAG_02592","SJAG_01084","SJAG_04726","SJAG_00596","SJAG_03815","SJAG_02091","SJAG_03893","SJAG_02342","SJAG_00409","SJAG_04668","SJAG_02883","SJAG_03185","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[89271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[94125,116819,102544,104284,116025,110092,91651,114210,95727,106257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[99931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[79407,109763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009651"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_01084":null,"SJAG_02091":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03815":null,"SJAG_03893":null,"SJAG_04205":null,"SJAG_04567":null,"SJAG_04668":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to osmotic stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"osmotic response","type":"exact"},{"name":"osmotic stress response","type":"exact"}],"termid":"GO:0006970","terms_by_termid":{"GO:0009651":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null}}


id: GO:0051623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of norepinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of norepinephrine uptake","termid":"GO:0051621"},{"relation_name":"positively_regulates","term_name":"norepinephrine uptake","termid":"GO:0051620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of norepinephrine uptake","synonyms":[{"name":"activation of norepinephrine uptake","type":"narrow"},{"name":"positive regulation of levarterenol uptake","type":"exact"},{"name":"positive regulation of noradrenaline uptake","type":"exact"},{"name":"positive regulation of norepinephrine import","type":"exact"},{"name":"stimulation of norepinephrine uptake","type":"narrow"},{"name":"up regulation of norepinephrine uptake","type":"exact"},{"name":"up-regulation of norepinephrine uptake","type":"exact"},{"name":"upregulation of norepinephrine uptake","type":"exact"}],"termid":"GO:0051623"}


id: PBO:0060094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 41","termid":"PBO:0060094"}


id: MOD:01368
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:478#R","PubMed:15525938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site R","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01368"}


id: PBO:0052605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kaptin, actin binding protein","termid":"PBO:0052605"}


id: PBO:0030128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_manganese_level","termid":"PBO:0030128"}


id: GO:0036151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylcholine, through sequential deacylation and re-acylation reactions, to generate phosphatidylcholine containing different types of fatty acid acyl chains.","definition_xrefs":["PMID:18458083","GOC:mw","PMID:18195019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine acyl-chain remodeling","secondary_identifiers":["Reactome:R-HSA-1482788"],"synonyms":[{"name":"phosphatidylcholine acyl-chain remodelling","type":"exact"}],"termid":"GO:0036151"}


id: GO:0140851
data:
  {"annotated_genes":["SJAG_00341"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94112],"is_not":false,"summary":null,"term":"GO:0140851"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 3 at the lysine-14 residue.","definition_xrefs":["PMID:31468675","PMID:34010645","PMID:28624371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 ubiquitin ligase activity","termid":"GO:0141055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0004842"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016746","GO:0019787","GO:0004842","GO:0016740"],"is_obsolete":false,"name":"histone H3K14 ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K14 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H3-K14 specific)","type":"exact"}],"termid":"GO:0140851","terms_by_termid":{"GO:0140851":null}}


id: GO:0008635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process and is mediated by cytochrome c.","definition_xrefs":["GOC:mtg_apoptosis","Wikipedia:Caspase","GOC:tb","GOC:jl","GOC:dph","PMID:14744432"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c (obsolete GO:0008635)","secondary_identifiers":["Reactome:R-HSA-111459"],"synonyms":[{"name":"activation of caspase activity by cytochrome c","type":"narrow"},{"name":"caspase activation via cytochrome c","type":"exact"}],"termid":"GO:0008635"}


id: PBO:0069055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 301, pseudogene","termid":"PBO:0069055"}


id: MONDO:0009566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marfanoid habitus B intellectual deficit, autosomal recessive is a very rare multiple congenital anomalies syndrome described in four sibs and characterized by intellectual deficit, flat face and some skeletelal features of Marfan syndrome such as tall stature, dolichostenomelia, arm span larger than height, arachnodactyly of hands and feet, little subcutaneous fat, muscle hypotonia and intellectual deficit.","definition_xrefs":["Orphanet:2463"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marfanoid habitus-autosomal recessive intellectual disability syndrome","secondary_identifiers":["UMLS:C1855347","MESH:C565410","OMIM:248770","GARD:3388","MEDGEN:343326"],"synonyms":[{"name":"MARFANOID intellectual disability syndrome, autosomal","type":"related"},{"name":"MARFANOID mental retardation syndrome, autosomal","type":"related"},{"name":"Marfanoid intellectual disability syndrome autosomal","type":"related"},{"name":"Marfanoid mental retardation syndrome autosomal","type":"related"}],"termid":"MONDO:0009566","xrefs":{"Monarch":{"xref_id":"0009566"}}}


id: PBO:0076018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 11 interacting protein","termid":"PBO:0076018"}


id: PBO:0071551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 16","termid":"PBO:0071551"}


id: MONDO:1011554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ligneous membranitis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligneous membranitis, non-human animal","termid":"MONDO:1011459"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligneous membranitis, dog","secondary_identifiers":["OMIA:002020-9615"],"termid":"MONDO:1011554","xrefs":{"Monarch":{"xref_id":"1011554"}}}


id: GO:0080125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of the multicellular structure septum over time, from its formation to the mature structure. The multicellular structure septum is the thin partition or membrane that divides a cavity or a mass of tissue.","definition_xrefs":["GOC:dhl"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular structure septum development (obsolete GO:0080125)","termid":"GO:0080125"}


id: PR:P87129
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 53 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00585","PANTHER:PTHR12820:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 53 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.15","secondary_identifiers":["UniProtKB:P87129"],"synonyms":[{"name":"GARP complex subunit vps53 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-VPS53","type":"exact"}],"termid":"PR:P87129"}


id: PBO:0048534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8","termid":"PBO:0048534"}


id: GO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of dendritic spine development","termid":"GO:0060998"},{"relation_name":"negatively_regulates","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic spine development","termid":"GO:0061000"}


id: GO:0044674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexameric complex consisting of three polypeptides in an alpha2beta2gamma2 arrangement. Involved in the reduction of the coenzyme M-bound methyl group to methane, which is the final step in methanogenesis.","definition_xrefs":["PMID:9367957","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methyl coenzyme M reductase complex","termid":"GO:0044674"}


id: GO:0014004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a microglial cell. Microglia are glial cells that act as the immune cells of the central nervous system. They form part of the supporting structure of this system.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"is_a","term_name":"macrophage differentiation","termid":"GO:0030225"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglia differentiation","synonyms":[{"name":"microglial cell differentiation","type":"exact"}],"termid":"GO:0014004"}


id: MONDO:0018587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"non-recovering obstetric brachial plexus lesion","secondary_identifiers":["MEDGEN:1810145","Orphanet:439202","GARD:21826","UMLS:C5680048"],"synonyms":[{"name":"chronic obstetric brachial plexus injury","type":"exact"},{"name":"chronic obstetric brachial plexus palsy","type":"exact"},{"name":"non-recovering OBPI","type":"exact"},{"name":"non-recovering OBPL","type":"exact"}],"termid":"MONDO:0018587","xrefs":{"Monarch":{"xref_id":"0018587"}}}


id: FYPO:0000057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitochondrial nucleoid is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mitochondrial nucleoid enlarged","synonyms":[{"name":"mitochondrial nucleoid enlarged during mitotic cell cycle","type":"related"},{"name":"mitochondrial nucleoid enlarged during vegetative growth","type":"exact"}],"termid":"FYPO:0000057"}


id: PBO:0090155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L15","termid":"PBO:0090155"}


id: PBO:0058736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6861","termid":"PBO:0058736"}


id: PBO:0030234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus_(obsolete_FYPO:0001464)","termid":"PBO:0030234"}


id: MONDO:0100263
data:
  {"annotated_genes":["SJAG_02997"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013930"},{"annotations":[86993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013931"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0019053","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX6 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX6 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX6 defect","type":"exact"}],"termid":"MONDO:0100263","terms_by_termid":{"MONDO:0013930":null,"MONDO:0013931":null},"xrefs":{"Monarch":{"xref_id":"0100263"}}}


id: PBO:0058514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5702","termid":"PBO:0058514"}


id: PBO:0071202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 43","termid":"PBO:0071202"}


id: GO:0030188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulates the activity of a molecular chaperone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone regulator activity (obsolete GO:0030188)","synonyms":[{"name":"chaperone regulator activity","type":"exact"}],"termid":"GO:0030188"}


id: PBO:0071387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 10","termid":"PBO:0071387"}


id: PBO:0063770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 2 pseudogene 1","termid":"PBO:0063770"}


id: PBO:0069376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 636, pseudogene","termid":"PBO:0069376"}


id: GO:0106222
data:
  {"annotated_genes":["SJAG_04601","SJAG_03193","SJAG_02622","SJAG_04942","SJAG_00701","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92596,94918,104056,111606,115168,117864],"is_not":false,"summary":null,"term":"GO:0106222"}]},"cv_name":"molecular_function","definition":"Binding to a long noncoding RNA (lncRNA).","definition_xrefs":["PMID:25578728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00701":null,"SJAG_02622":null,"SJAG_03193":null,"SJAG_04601":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"lncRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long noncoding RNA binding","type":"exact"}],"termid":"GO:0106222","terms_by_termid":{"GO:0106222":null}}


id: GO:0005016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophin TRKC receptor activity (obsolete GO:0005016)","synonyms":[{"name":"neurotrophin TRKC receptor activity","type":"exact"}],"termid":"GO:0005016"}


id: GO:0045805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eclosion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eclosion","termid":"GO:0007563"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eclosion","synonyms":[{"name":"activation of eclosion","type":"narrow"},{"name":"stimulation of eclosion","type":"narrow"},{"name":"up regulation of eclosion","type":"exact"},{"name":"up-regulation of eclosion","type":"exact"},{"name":"upregulation of eclosion","type":"exact"}],"termid":"GO:0045805"}


id: GO:0032535
data:
  {"annotated_genes":["SJAG_03602","SJAG_02566","SJAG_04332","SJAG_02700","SJAG_04100","SJAG_00521","SJAG_03401","SJAG_02019","SJAG_03086","SJAG_00279","SJAG_01805","SJAG_02532","SJAG_04479","SJAG_01894","SJAG_04668","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79827,92089,75443,78930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[113666,73271,95438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006884"},{"annotations":[92167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"},{"annotations":[93564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045793"},{"annotations":[79078,76533,67722,66844,77064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[94304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008361"},{"annotations":[98189],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"A process that modulates the size of a cellular component.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03401":null,"SJAG_03602":null,"SJAG_04100":null,"SJAG_04332":null,"SJAG_04479":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular component size","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032535","terms_by_termid":{"GO:0006884":null,"GO:0008361":null,"GO:0009992":null,"GO:0030833":null,"GO:0045793":null,"GO:0051016":null,"GO:0061387":null}}


id: GO:0047799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclopentanone + H+ + NADPH + O2 = 5-valerolactone + H2O + NADP+.","definition_xrefs":["EC:1.14.13.16","RHEA:15737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cyclopentanone monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02554","MetaCyc:CYCLOPENTANONE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"cyclopentanone 1,2-monooxygenase activity","type":"related"},{"name":"cyclopentanone oxygenase activity","type":"related"},{"name":"cyclopentanone,NADPH:oxygen oxidoreductase (5-hydroxylating, lactonizing)","type":"related"}],"termid":"GO:0047799"}


id: PBO:0003824
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.41","termid":"PBO:0003824"}


id: PBO:0047826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXO6 antisense RNA 1","termid":"PBO:0047826"}


id: PBO:0044014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1 pseudogene 3","termid":"PBO:0044014"}


id: PR:Q03392
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03781","PANTHER:PTHR11352:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.09","secondary_identifiers":["UniProtKB:Q03392"],"synonyms":[{"name":"PCNA (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCNA","type":"exact"}],"termid":"PR:Q03392"}


id: PBO:0049733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCLS1 associated protein X-1","termid":"PBO:0049733"}


id: RO:0002629
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) directly postively regulates process(P2) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P1 directly positively regulates P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"positively_regulates","termid":"RO:0002213"},{"relation_name":"is_a","term_name":"directly_regulates","termid":"RO:0002578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulates","termid":"RO:0002629"}


id: GO:0010125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mycothiol, which consists of N-acetyl-L-cysteine linked to a pseudodisaccharide, D-glucosamine and myo-inositol. Mycothiol is produced in actinomycetes like mycobacteria and serves similar functions to glutathione.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycothiol metabolic process","termid":"GO:0010126"},{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"mycothiol biosynthetic process","secondary_identifiers":["MetaCyc:PWY1G-0"],"synonyms":[{"name":"mycothiol anabolism","type":"exact"},{"name":"mycothiol biosynthesis","type":"exact"},{"name":"mycothiol formation","type":"exact"},{"name":"mycothiol synthesis","type":"exact"}],"termid":"GO:0010125"}


id: PBO:0084411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m(7)GpppX pyrophosphatase regulator; non-essential, stress induced regulatory protein; modulates m7G-oligoribonucleotide metabolism; inhibits Dcs1p; regulated by Msn2p, Msn4p, and the Ras-cAMP-cAPK signaling pathway; mutant has increased aneuploidy tolerance; DCS2 has a paralog, DCS1, that arose from the whole genome duplication","termid":"PBO:0084411"}


id: GO:0018923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving limonene (4-isopropenyl-1-methyl-cyclohexene), a monocyclic monoterpene.","definition_xrefs":["UM-BBD_pathwayID:lim"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene metabolic process","termid":"GO:0043692"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"limonene metabolic process","synonyms":[{"name":"limonene metabolism","type":"exact"}],"termid":"GO:0018923"}


id: GO:0097301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates the internal concentration of potassium ions at the level of a cell by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:20412803"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0097301)","synonyms":[{"name":"cellular potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"broad"}],"termid":"GO:0097301"}


id: MONDO:0008774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysine and hydroxylysine metabolism","termid":"MONDO:0017351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"2-aminoadipic 2-oxoadipic aciduria","secondary_identifiers":["OMIM:245130","DOID:0111453","MESH:C565453","UMLS:C1859817","Orphanet:79154","OMIM:204750","GARD:16708","MEDGEN:395350"],"synonyms":[{"name":"2-aminoadipic 2-oxoadipic aciduria","type":"exact"},{"name":"AMOXAD","type":"exact"},{"name":"Ketoadipicaciduria","type":"exact"},{"name":"alpha-aminoadipic aciduria","type":"exact"},{"name":"alpha-aminoadipic and alpha-ketoadipic aciduria","type":"exact"}],"termid":"MONDO:0008774","xrefs":{"Monarch":{"xref_id":"0008774"}}}


id: PBO:0076748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonic family member 3","termid":"PBO:0076748"}


id: MONDO:0019258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild phenylketonuria is a rare form of phenylketouria (PKU), an inborn error of amino acid metabolism, characterized by symptoms of PKU of mild to moderate severity.","definition_xrefs":["Orphanet:79253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"mild phenylketonuria","secondary_identifiers":["UMLS:C5680203","GARD:10324","MEDGEN:1842357"],"synonyms":[{"name":"mPKU","type":"exact"},{"name":"mild PKU","type":"exact"},{"name":"variant PKU","type":"exact"},{"name":"variant phenylketonuria","type":"exact"}],"termid":"MONDO:0019258","xrefs":{"Monarch":{"xref_id":"0019258"}}}


id: PBO:0086857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA binding protein of unknown function; localizes to stress granules induced by glucose deprivation; predicted to be involved in ribosome biogenesis","termid":"PBO:0086857"}


id: PBO:0044314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b561 family member D2","termid":"PBO:0044314"}


id: PBO:0087884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; recruits the Cyc8p-Tup1p complex to promoters; mediates glucose repression and negatively regulates a variety of processes including filamentous growth and alkaline pH response; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0087884"}


id: PBO:0083214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF YRF1-2/YER190W; identified by gene-trapping, expression analysis, and homology","termid":"PBO:0083214"}


id: FYPO:0006708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation","termid":"FYPO:0002678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein phosphorylation during glucose starvation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to glucose starvation","type":"exact"},{"name":"abolished protein phosphorylation during glucose deprivation","type":"exact"},{"name":"protein phosphorylation abolished during glucose starvation","type":"exact"}],"termid":"FYPO:0006708"}


id: MONDO:0956997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An IDH-mutant, and 1p/19q-codeleted oligodendroglioma that is characterized as grade 3 tumors associated with a more rapid growth. Grade 3 tumors appear to have abnormalities on chromosomes 9 or 10, along with unusual amounts of growth factors and proteins, which are thought to contribute to the more rapid growth of these gliomas.","definition_xrefs":["DOID:0081282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IDH-mutant and 1p/19q-codeleted oligodendroglioma","termid":"MONDO:0859592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oligodendroglioma, IDH-mutant and 1p/19q-codeleted, grade 3","termid":"MONDO:0956997","xrefs":{"Monarch":{"xref_id":"0956997"}}}


id: MONDO:0019393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic malabsorption due to increased acid bile synthesis is an intestinal disease of unknown etiology characterized by an overproduction of bile acids which leads to chronic watery diarrhea.","definition_xrefs":["Orphanet:84065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of bile acid synthesis","termid":"MONDO:0019218"},{"relation_name":"is_a","term_name":"malabsorption syndrome","termid":"MONDO:0020598"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"idiopathic malabsorption due to bile acid synthesis defects","secondary_identifiers":["GARD:19046","MEDGEN:900722","UMLS:C4274509"],"synonyms":[{"name":"idiopathic bile acid malabsorption","type":"exact"}],"termid":"MONDO:0019393","xrefs":{"Monarch":{"xref_id":"0019393"}}}


id: GO:0015312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + polyamine(in) = H+(in) + polyamine(out).","definition_xrefs":["TC:2.A.1.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"polyamine:proton antiporter activity","synonyms":[{"name":"polyamine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015312"}


id: MONDO:0015944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Axial mesodermal dysplasia spectrum is a rare developmental defect during embryogenesis syndrome characterized by congenital manifestations of both oculo-auriculo-vertebral spectrum and caudal regression sequence. Phenotype is highly variable but patients typically present facial dysmorphism (incl. asymmetry, hypertelorism), auricular abnormalities (e.g. preauricular tags, microtia, absence of middle ear ossicles), skeletal malformations (hemivertebrae, hip dislocation, sacral agenesis/dysplasia, talipes equinovarus, flexion deformity of lower limbs), cardiac defects (dextrocardia, septal defects), renal and genitourinary anomalies (such as renal agensis/dysplasia, abnormal external genitalia, cryptorchidia), as well as anal anomalies such as anal atresia and rectovesical fistula.","definition_xrefs":["Orphanet:1834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axial mesodermal dysplasia spectrum","secondary_identifiers":["MEDGEN:419853","MESH:C537790","SCTID:765755006","UMLS:C2931613","GARD:213"],"synonyms":[{"name":"Russell Weaver Bull syndrome","type":"related"},{"name":"Russell-Weaver-Bull syndrome","type":"exact"},{"name":"blastogenesis defect","type":"exact"}],"termid":"MONDO:0015944","xrefs":{"Monarch":{"xref_id":"0015944"}}}


id: MONDO:0012258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS) characterized by belt-like areas of erythema with multiple vesicles and small blisters at the advancing edge of erythema.","definition_xrefs":["Orphanet:158681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 2E, with migratory circinate erythema","secondary_identifiers":["OMIM:609352","GARD:16990","MEDGEN:324475","MESH:C563730","UMLS:C1836284","SCTID:716700003"],"synonyms":[{"name":"EBS-migr","type":"exact"},{"name":"epidermolysis bullosa simplex 2E, with migratory circinate erythema","type":"exact"},{"name":"epidermolysis bullosa simplex with migratory circinate erythema","type":"exact"}],"termid":"MONDO:0012258","xrefs":{"Monarch":{"xref_id":"0012258"}}}


id: PBO:0040626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 5","termid":"PBO:0040626"}


id: MONDO:0017577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spontaneous periodic hypothermia (SPH) is a neurological disorder characterized by spontaneous periodic hypothermia and hyperhidrosis in the absence of hypothalamic lesions.","definition_xrefs":["Orphanet:29822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spontaneous periodic hypothermia","secondary_identifiers":["GARD:4815","UMLS:C2931542","MEDGEN:419438","MESH:C537594"],"synonyms":[{"name":"Shapiro syndrome","type":"exact"},{"name":"Shapiro's syndrome","type":"related"},{"name":"episodic spontaneous hypothermia","type":"exact"},{"name":"recurrent spontaneous hypothermia with hypoplasia of the corpus callosum","type":"related"},{"name":"spontaneous periodic hypothermia syndrome","type":"related"},{"name":"spontaneous recurrent hypothermia syndrome","type":"related"}],"termid":"MONDO:0017577","xrefs":{"Monarch":{"xref_id":"0017577"}}}


id: MONDO:0035556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial atrioventricular septal defect without ventricular hypoplasia (obsolete MONDO:0035556)","secondary_identifiers":["Orphanet:576235"],"termid":"MONDO:0035556","xrefs":{"Monarch":{"xref_id":"0035556"}}}


id: GO:0072700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bismuth (Bi) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bismuth","synonyms":[{"name":"response to bismuth ion","type":"exact"}],"termid":"GO:0072700"}


id: MONDO:0009310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any chronic granulomatous disease in which the cause of the disease is a mutation in the NCF2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 2","secondary_identifiers":["UMLS:C1856245","GARD:15177","MESH:C565531","OMIM:233710","DOID:0070191","MEDGEN:383869","NANDO:2201282"],"synonyms":[{"name":"CDG2","type":"related"},{"name":"CGD, autosomal recessive cytochrome B-positive, type 2","type":"related"},{"name":"NCF2 chronic granulomatous disease","type":"exact"},{"name":"Ncf2, deficiency of","type":"related"},{"name":"P67-PHOX, deficiency of","type":"related"},{"name":"chronic granulomatous disease 2, autosomal recessive","type":"exact"},{"name":"chronic granulomatous disease caused by mutation in NCF2","type":"exact"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-POSITIVE, type II","type":"related"},{"name":"granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type 2","type":"exact"},{"name":"granulomatous disease, chronic, due to Ncf2 deficiency","type":"related"},{"name":"neutrophil cytosol Factor 2, deficiency of","type":"related"}],"termid":"MONDO:0009310","xrefs":{"Monarch":{"xref_id":"0009310"}}}


id: PBO:0087678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; termed subunit I or subunit j; does not correspond to known ATP synthase subunits in other organisms","termid":"PBO:0087678"}


id: PBO:0087588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches","termid":"PBO:0087588"}


id: PBO:0031586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_translation_phenotype","termid":"PBO:0031586"}


id: PBO:0087929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-golgi network aminophospholipid translocase (flippase); P4-type ATPase; maintains membrane lipid asymmetry in post-Golgi secretory vesicles; contributes to clathrin-coated vesicle formation, endocytosis, protein trafficking between the Golgi and endosomal system and the cellular response to mating pheromone; autoinhibited by its C-terminal tail; localizes to the trans-Golgi network","termid":"PBO:0087929"}


id: PBO:0074093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 8","termid":"PBO:0074093"}


id: FYPO:0002135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is increased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased protein-RNA interaction","synonyms":[{"name":"increased RNA binding","type":"exact"},{"name":"increased RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002135"}


id: GO:0061051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle hypertrophy","termid":"GO:0010613"},{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle tissue growth","termid":"GO:0055023"},{"relation_name":"is_a","term_name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"},{"relation_name":"positively_regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061051"}


id: SO:0000707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 5' five prime splice site region of the donor RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_site","termid":"SO:0001420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_donor_site","synonyms":[{"name":"5 prime trans splice site","type":"related"},{"name":"trans splice donor site","type":"exact"},{"name":"trans-splice donor site","type":"exact"}],"termid":"SO:0000707"}


id: PBO:0049224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 6","termid":"PBO:0049224"}


id: PBO:0071982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 11","termid":"PBO:0071982"}


id: PR:Q9UUJ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pvg5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.02c","synonyms":[{"name":"PvGal synthesis protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pvg5","type":"exact"},{"name":"meiotically up-regulated gene 50 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ0"}


id: PBO:0040267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atlastin GTPase 2","termid":"PBO:0040267"}


id: MONDO:0010682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myoclonic epilepsy, progressive, X-linked (obsolete MONDO:0010682)","secondary_identifiers":["OMIM:310370"],"synonyms":[{"name":"myoclonic epilepsy, progressive","type":"exact"}],"termid":"MONDO:0010682","xrefs":{"Monarch":{"xref_id":"0010682"}}}


id: PBO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S7 (predicted)","termid":"PBO:0002093"}


id: PBO:0063974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 8","termid":"PBO:0063974"}


id: GO:1901191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation initiation ternary complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"is_a","term_name":"regulation of formation of translation initiation ternary complex","termid":"GO:1901190"},{"relation_name":"negatively_regulates","term_name":"formation of translation initiation ternary complex","termid":"GO:0001677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of formation of translation initiation ternary complex","synonyms":[{"name":"down regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"down regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"down-regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"down-regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"downregulation of formation of translation initiation ternary complex","type":"exact"},{"name":"downregulation of translation initiation ternary complex assembly","type":"exact"},{"name":"inhibition of formation of translation initiation ternary complex","type":"narrow"},{"name":"inhibition of translation initiation ternary complex assembly","type":"exact"},{"name":"negative regulation of translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:1901191"}


id: PBO:0055470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2903","termid":"PBO:0055470"}


id: MONDO:0023068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Engelhard Yatziv syndrome","termid":"MONDO:0023068","xrefs":{"Monarch":{"xref_id":"0023068"}}}


id: PBO:0064644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPDPF pseudogene 1","termid":"PBO:0064644"}


id: GO:0051850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of structures and/or molecules in an organism that are required for the acquisition and/or utilization of nutrients obtained from its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of nutrients from symbiont","termid":"GO:0051850"}


id: GO:0036392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 20 (CCL20) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 20 production","synonyms":[{"name":"C-C motif chemokine 20 production","type":"exact"},{"name":"CCL-20 production","type":"exact"},{"name":"CCL20 production","type":"exact"}],"termid":"GO:0036392"}


id: GO:0031456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine betaine, N-trimethylglycine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"glycine betaine metabolic process","termid":"GO:0031455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine biosynthetic process","synonyms":[{"name":"N-trimethylglycine biosynthesis","type":"exact"},{"name":"N-trimethylglycine biosynthetic process","type":"exact"},{"name":"glycine betaine anabolism","type":"exact"},{"name":"glycine betaine biosynthesis","type":"exact"},{"name":"glycine betaine formation","type":"exact"},{"name":"glycine betaine synthesis","type":"exact"}],"termid":"GO:0031456"}


id: GO:0106095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex that catalyzes the reaction: 7-methylguanosine-5'-triphospho-5'-pholynucleotide + H20 = 7-methylguanosine-5'-phosphate + polynucleotide.","definition_xrefs":["GOC:lnp","PMID:22985415","PMID:26258763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"m7G(5')pppN diphosphatase complex","synonyms":[{"name":"7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase enzyme","type":"exact"},{"name":"DCS1 decapping scavenger complex","type":"exact"},{"name":"M(7)G(5')pppN pyrophosphatase enzyme","type":"exact"},{"name":"m7G(5')pppN diphosphatase enzyme","type":"exact"},{"name":"m7G(5')pppN pyrophosphatase enzyme","type":"exact"}],"termid":"GO:0106095"}


id: GO:1990728
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the assembly of the mitotic checkpoint complex that in turn inhibits the anaphase promoting complex/cyclosome (APC/C). The MAD1 dimer recruits the open form of MAD2 (O-MAD2) turning it into the closed form (C-MAD2) upon binding. C-MAD2 inhibits CDC20, a member of the APC/C, upon release from the MAD1-MAD2 complex.","definition_xrefs":["PMID:22898774","PMID:12006501","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitotic spindle assembly checkpoint MAD1-MAD2 complex","synonyms":[{"name":"MAD1-MAD2 complex","type":"exact"}],"termid":"GO:1990728"}


id: GO:0015727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lactate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lactate is 2-hydroxypropanoate, CH3-CHOH-COOH; L(+)-lactate is formed by anaerobic glycolysis in animal tissues, and DL-lactate is found in sour milk, molasses and certain fruit juices.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lactate transport","termid":"GO:0015727"}


id: PBO:0051113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-69","termid":"PBO:0051113"}


id: FYPO:0000616
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119132,119130,119131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through mitotic anaphase is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic anaphase progression","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_01956","SJAG_03351"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal anaphase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic anaphase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in anaphase","type":"exact"},{"name":"mitotic cell cycle progression in anaphase: abnormal","type":"related"}],"termid":"FYPO:0000616","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: CHEBI:2639
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amiloride","termid":"CHEBI:2639"}


id: PBO:0050799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 7","termid":"PBO:0050799"}


id: GO:0010116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of abscisic acid biosynthetic process","termid":"GO:0010115"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"abscisic acid biosynthetic process","termid":"GO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of abscisic acid biosynthetic process","synonyms":[{"name":"activation of abscisic acid biosynthetic process","type":"narrow"},{"name":"positive regulation of abscisic acid anabolism","type":"exact"},{"name":"positive regulation of abscisic acid biosynthesis","type":"exact"},{"name":"positive regulation of abscisic acid formation","type":"exact"},{"name":"positive regulation of abscisic acid synthesis","type":"exact"},{"name":"stimulation of abscisic acid biosynthetic process","type":"narrow"},{"name":"up regulation of abscisic acid biosynthetic process","type":"exact"},{"name":"up-regulation of abscisic acid biosynthetic process","type":"exact"},{"name":"upregulation of abscisic acid biosynthetic process","type":"exact"}],"termid":"GO:0010116"}


id: MONDO:0014669
data:
  {"annotated_genes":["SJAG_04225"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84860],"is_not":false,"summary":null,"term":"MONDO:0014669"}]},"cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the DRAM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04225":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 21","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16125","MEDGEN:891534","OMIM:616502","UMLS:C4049066","DOID:0081447"],"synonyms":[{"name":"CORD21","type":"related"},{"name":"DRAM2 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 21","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in DRAM2","type":"exact"},{"name":"cone-rod dystrophy type 21","type":"exact"},{"name":"retinal dystrophy with early macular involvement","type":"related"}],"termid":"MONDO:0014669","terms_by_termid":{"MONDO:0014669":null},"xrefs":{"Monarch":{"xref_id":"0014669"}}}


id: MONDO:0025713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioedema, hereditary, 7","secondary_identifiers":["MEDGEN:1784046","UMLS:C5543526","OMIM:619366"],"synonyms":[{"name":"HAE7","type":"exact"}],"termid":"MONDO:0025713","xrefs":{"Monarch":{"xref_id":"0025713"}}}


id: MONDO:1011231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, sheep","secondary_identifiers":["OMIA:000337-9940"],"termid":"MONDO:1011231","xrefs":{"Monarch":{"xref_id":"1011231"}}}


id: GO:0051321
data:
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cycle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Meiosis","GO:0007126"],"synonyms":[{"name":"meiosis","type":"related"}],"termid":"GO:0051321","terms_by_termid":{"GO:0000212":null,"GO:0000706":null,"GO:0000707":null,"GO:0000708":null,"GO:0000709":null,"GO:0000710":null,"GO:0000712":null,"GO:0006279":null,"GO:0006311":null,"GO:0007127":null,"GO:0007129":null,"GO:0007131":null,"GO:0007135":null,"GO:0010032":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0030437":null,"GO:0030476":null,"GO:0030989":null,"GO:0030999":null,"GO:0031321":null,"GO:0031322":null,"GO:0031619":null,"GO:0032118":null,"GO:0032120":null,"GO:0032121":null,"GO:0033315":null,"GO:0033316":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0040020":null,"GO:0042138":null,"GO:0044778":null,"GO:0044821":null,"GO:0045128":null,"GO:0045141":null,"GO:0045143":null,"GO:0045144":null,"GO:0051232":null,"GO:0051307":null,"GO:0051321":null,"GO:0051445":null,"GO:0051446":null,"GO:0051447":null,"GO:0051455":null,"GO:0051456":null,"GO:0051598":null,"GO:0051728":null,"GO:0051755":null,"GO:0061982":null,"GO:0062209":null,"GO:0070197":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:0090306":null,"GO:0110031":null,"GO:0110032":null,"GO:0110044":null,"GO:0110045":null,"GO:0140013":null,"GO:0140456":null,"GO:0140642":null,"GO:0140648":null,"GO:1902103":null,"GO:1902346":null,"GO:1902441":null,"GO:1903024":null,"GO:1904514":null,"GO:1904967":null,"GO:1905191":null,"GO:1905263":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990395":null,"GO:1990571":null,"GO:1990813":null,"GO:1990918":null,"GO:1990946":null,"GO:1990949":null,"GO:1990950":null}}


id: GO:0032837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during a normally chiasmate meiosis under the condition that chiasma have not occurred between a particular pair of homologs. Distributive segregation is a backup mechanism to ensure the segregation of homologs that have failed to cross over - either as a consequence of mutation or not, as, for example, the 4th chromosome of Drosophila melanogaster (which never exchanges, presumably due to its small size) - but nevertheless segregate normally.","definition_xrefs":["GOC:sart","GOC:expert_rsh","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"distributive segregation","termid":"GO:0032837"}


id: MONDO:0016366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal phenylketonuria (PKU) is a rare disorder of phenylalanine metabolism, an inborn error of amino acid metabolism, characterized by the development of microcephaly, growth retardation, congenital heart disease, facial dysmorphism and intellectual disability in nonphenylketonuric offspring of mothers with excess phenylalanine (Phe) concentrations.","definition_xrefs":["Orphanet:2209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"maternal phenylketonuria","secondary_identifiers":["icd11.foundation:1509230254","MESH:D017042","UMLS:C0085547","GARD:3413","MEDGEN:88435"],"synonyms":[{"name":"hyperphenylalaninemic embryopathy","type":"exact"},{"name":"maternal PKU","type":"exact"},{"name":"maternal hyperphenylalaninemia","type":"exact"},{"name":"phenylketonuric embryopathy","type":"exact"}],"termid":"MONDO:0016366","xrefs":{"Monarch":{"xref_id":"0016366"}}}


id: PBO:0059709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 17","termid":"PBO:0059709"}


id: GO:1902637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural crest cell differentiation that is involved in thymus development.","definition_xrefs":["GOC:nhn","GOC:TermGenie","GO_REF:0000060","PMID:15741317","PMID:18292542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell differentiation","termid":"GO:0014033"},{"relation_name":"part_of","term_name":"thymus development","termid":"GO:0048538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell differentiation involved in thymus development","termid":"GO:1902637"}


id: PBO:0090620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc6","termid":"PBO:0090620"}


id: SO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The lambda bacteriophage is the vector for the linear lambda clone. The genes involved in the lysogenic pathway are removed from the from the viral DNA. Up to 25 kb of foreign DNA can then be inserted into the lambda genome.","definition_xrefs":["ISBN:0-1767-2380-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lambda_vector","synonyms":[{"name":"lambda vector","type":"exact"}],"termid":"SO:0000754"}


id: MONDO:0018882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vasculitis represents a clinically heterogenous group of diseases of multifactorial etiology characterized by inflammation of either large-sized vessels (large-vessel vasculitis, e.g. Giant-cell arteritis and Takayasu arteritis), medium-sized vessels (medium-vessel vasculitis e.g. polyarteritis nodosa and Kawasaki disease), or small-sized vessels (small-vessel vasculitis, e.g. granulomatosis with polyangiitis, microscopic polyangiitis, immunoglobulin A vasculitis, and cutaneous leukocytoclastic angiitis). Vasculitis occurs at any age, may be acute or chronic, and manifests with general symptoms such as fever, weight loss and fatigue, as well as more specific clinical signs depending on the type of vessels and organs affected. The degree of severity is variable, ranging from life or sight threatening disease (e.g. Behcet disease) to relatively minor skin disease.","definition_xrefs":["Orphanet:52759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasculitis","secondary_identifiers":["EFO:0006803","MEDGEN:12054","MedDRA:10047115","MedDRA:10036023","UMLS:C0042384","icd11.foundation:572581721","Wikipedia:Vasculitis","DOID:865","SCTID:31996006","GARD:18844","MESH:D014657","NCIT:C26912"],"synonyms":[{"name":"angiitis","type":"related"},{"name":"systemic vasculitis","type":"narrow"}],"termid":"MONDO:0018882","xrefs":{"Monarch":{"xref_id":"0018882"}}}


id: GO:1903936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium arsenite stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18674524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to arsenic-containing substance","termid":"GO:0071243"},{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium arsenite","termid":"GO:1903935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium arsenite","termid":"GO:1903936"}


id: PBO:0043272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 2 member A","termid":"PBO:0043272"}


id: PBO:0004281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin family protein (predicted)","termid":"PBO:0004281"}


id: GO:0018033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal amide by hydrolysis and oxidation of an interior peptide in a secreted protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein C-terminal amidation (obsolete GO:0018033)","termid":"GO:0018033"}


id: MONDO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the fallopian tube. Representative examples include carcinoma, carcinosarcoma, and leiomyosarcoma.","definition_xrefs":["NCIT:C7480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"fallopian tube neoplasm","termid":"MONDO:0021092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube cancer","secondary_identifiers":["UMLS:C0153579","DOID:1964","icd11.foundation:459381514","MedDRA:10025915","MEDGEN:102276","GARD:20204","Orphanet:180242","SCTID:363444001","ICD9:183.2"],"synonyms":[{"name":"cancer of fallopian tube","type":"exact"},{"name":"cancer of fallopian tubes","type":"exact"},{"name":"fallopian tube cancer","type":"exact"},{"name":"fallopian tube malignant neoplasm","type":"exact"},{"name":"fallopian tube malignant tumor","type":"exact"},{"name":"fallopian tube malignant tumour","type":"exact"},{"name":"malignant fallopian tube neoplasm","type":"exact"},{"name":"malignant fallopian tube tumor","type":"exact"},{"name":"malignant fallopian tube tumour","type":"exact"},{"name":"malignant neoplasm of fallopian tube","type":"exact"},{"name":"malignant neoplasm of the fallopian tube","type":"exact"},{"name":"malignant neoplasm of uterine tube","type":"exact"},{"name":"malignant tubal tumor","type":"exact"},{"name":"malignant tubal tumour","type":"exact"},{"name":"malignant tumor of fallopian tube","type":"exact"},{"name":"malignant tumor of fallopian tubes","type":"exact"},{"name":"malignant tumor of the fallopian tube","type":"exact"},{"name":"malignant tumour of fallopian tube","type":"exact"},{"name":"malignant tumour of fallopian tubes","type":"exact"},{"name":"malignant tumour of the fallopian tube","type":"exact"},{"name":"neoplasm, fallopian tube, malignant","type":"exact"},{"name":"tubal cancer","type":"exact"},{"name":"tumor of the fallopian tube","type":"broad"},{"name":"tumor, fallopian tube, malignant","type":"exact"},{"name":"tumour of the fallopian tube","type":"broad"}],"termid":"MONDO:0002158","xrefs":{"Monarch":{"xref_id":"0002158"}}}


id: PR:O13767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A5.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.05c","synonyms":[{"name":"Spom972h-SPAC17A5.05c","type":"exact"}],"termid":"PR:O13767"}


id: MONDO:0021493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the minor salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of minor salivary gland","termid":"MONDO:0021370"},{"relation_name":"is_a","term_name":"benign neoplasm of salivary gland","termid":"MONDO:0021460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of minor salivary gland","secondary_identifiers":["SCTID:92220004","ICD9:210.4","UMLS:C0345615","MEDGEN:87508","NCIT:C4411"],"synonyms":[{"name":"benign minor salivary gland neoplasm","type":"exact"},{"name":"benign minor salivary gland tumor","type":"exact"},{"name":"benign minor salivary gland tumour","type":"exact"},{"name":"benign neoplasm of the minor salivary gland","type":"exact"},{"name":"benign tumor of minor salivary gland","type":"exact"},{"name":"benign tumor of the minor salivary gland","type":"exact"},{"name":"benign tumour of minor salivary gland","type":"exact"},{"name":"benign tumour of the minor salivary gland","type":"exact"},{"name":"minor salivary gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021493","xrefs":{"Monarch":{"xref_id":"0021493"}}}


id: PBO:0086250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that modulates the efficiency of translation termination; interacts with translation release factors eRF1 (Sup45p) and eRF3 (Sup35p) in vitro, contains a zinc finger domain characteristic of the TRIAD class of proteins","termid":"PBO:0086250"}


id: PATO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000343 gametophyte incompatible value (obsolete PATO:0000343)","termid":"PATO:0000343"}


id: GO:0006066
data:
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id: PBO:0034508
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id: FYPO:0001441
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of the SAGA complex to chromatin at promoters is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein complex localization","termid":"FYPO:0001440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased SAGA complex localization to promoter region","synonyms":[{"name":"decreased SAGA complex localisation to promoter region","type":"exact"},{"name":"decreased SAGA complex localization to promoter region during mitotic cell cycle","type":"related"},{"name":"decreased SAGA complex localization to promoter region during vegetative growth","type":"exact"},{"name":"decreased SAGA complex localization to transcription regulatory region","type":"exact"},{"name":"decreased SAGA complex recruitment","type":"exact"},{"name":"reduced SAGA complex localization to promoter region","type":"exact"},{"name":"reduced SAGA complex recruitment","type":"exact"}],"termid":"FYPO:0001441"}


id: PBO:0109940
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, spliceosomal Prp43","termid":"PBO:0109940"}


id: PBO:0062532
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 1 pseudogene","termid":"PBO:0062532"}


id: PBO:0082292
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginine transporter; expression is normally very low and it is unclear what conditions would induce significant expression; ALP1 has a paralog, CAN1, that arose from the whole genome duplication","termid":"PBO:0082292"}


id: GO:0019029
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form a protein helix with the genetic material contained within. Tobacco mosaic virus has such a capsid structure.","definition_xrefs":["UniProtKB-KW:KW-1139","ISBN:071673706X","VZ:885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"helical viral capsid","termid":"GO:0019029"}


id: PBO:0044446
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 24, pseudogene","termid":"PBO:0044446"}


id: PBO:0081365
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 202","termid":"PBO:0081365"}


id: MONDO:0012104
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lipodystrophy characterized by the association of lipoatrophy of the upper part of the body and lipohypertrophy of the thighs.","definition_xrefs":["Orphanet:79087"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"laminopathy","termid":"MONDO:0021106"},{"relation_name":"is_a","term_name":"acquired lipodystrophy","termid":"MONDO:0020089"},{"relation_name":"is_a","term_name":"partial lipodystrophy","termid":"MONDO:0027767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"acquired partial lipodystrophy","secondary_identifiers":["MESH:C562448","icd11.foundation:2042663302","UMLS:C0220989","MEDGEN:66352","NCIT:C129723","NANDO:1200862","SCTID:75659004","GARD:10509"],"synonyms":[{"name":"APLD","type":"exact"},{"name":"APLD, susceptibility to","type":"related"},{"name":"Barraquer-Simons syndrome","type":"exact"},{"name":"acquired partial lipodystrophy","type":"exact"},{"name":"lipodystophy partial progressive","type":"related"},{"name":"lipodystrophy cephalothoracic type","type":"related"},{"name":"lipodystrophy partial acquired","type":"related"},{"name":"lipodystrophy, cephalothoracic type","type":"related"},{"name":"lipodystrophy, partial, acquired, susceptibility to","type":"related"},{"name":"lipodystrophy, partial, progressive","type":"related"},{"name":"partial acquired lipodystrophy","type":"exact"},{"name":"progressive cephalothoracic lipodystrophy","type":"exact"},{"name":"susceptibility to partial acquired lipodystrophy","type":"related"}],"termid":"MONDO:0012104","xrefs":{"Monarch":{"xref_id":"0012104"}}}


id: MONDO:0013505
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the DPY19L2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"male infertility due to globozoospermia","termid":"MONDO:0015746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 9","secondary_identifiers":["MEDGEN:462757","DOID:0070175","DOID:0111156","GARD:15735","UMLS:C3151407","OMIM:613958"],"synonyms":[{"name":"DPY19L2 azoospermia","type":"exact"},{"name":"SPGF9","type":"related"},{"name":"azoospermia caused by mutation in DPY19L2","type":"exact"},{"name":"globozoospermia, complete","type":"related"},{"name":"globozoospermia, total","type":"related"},{"name":"spermatogenic failure 9","type":"exact"},{"name":"spermatogenic failure type 9","type":"exact"}],"termid":"MONDO:0013505","xrefs":{"Monarch":{"xref_id":"0013505"}}}


id: GO:0004394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + heparan sulfate = adenosine 3',5'-bisphosphate + heparan sulfate 2-O-sulfate; results in 2-O-sulfation of iduronic acid residues in heparan sulfate.","definition_xrefs":["PMID:9153262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"heparan sulfate 2-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2076508"],"synonyms":[{"name":"heparan sulfate 2-O-sulfotransferase activity","type":"exact"},{"name":"heparan-sulfate 2-O-sulphotransferase activity","type":"exact"},{"name":"heparin 2-sulfotransferase activity","type":"related"},{"name":"heparin-sulphate 2-sulphotransferase activity","type":"related"}],"termid":"GO:0004394"}


id: MONDO:0010100
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM2 gangliosidosis, variant B or Tay-Sachs disease is marked by accumulation of G2 gangliosides due to hexosaminidase A deficiency.","definition_xrefs":["Orphanet:845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"GM2 gangliosidosis","termid":"MONDO:0017720"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002039","MONDO:0005244","MONDO:0002525","MONDO:0002561","MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"Tay-Sachs disease","secondary_identifiers":["MEDGEN:11713","icd11.foundation:215008783","GARD:7737","NANDO:1200071","NCIT:C85184","MESH:D013661","UMLS:C0039373","MedDRA:10043147","NORD:1761","DOID:3320","ICD10CM:E75.02","SCTID:49562005","NANDO:2201199","OMIM:272800","SCTID:111385000"],"synonyms":[{"name":"B variant GM2 gangliosidosis","type":"related"},{"name":"B variant GM2-gangliosidosis","type":"related"},{"name":"GM2 gangliosidosis, B, B1 variant","type":"exact"},{"name":"GM2 gangliosidosis, type 1","type":"related"},{"name":"GM2-gangliosidosis, adult chronic type","type":"related"},{"name":"GM2-gangliosidosis, several forms","type":"exact"},{"name":"GM2-gangliosidosis, type 1","type":"related"},{"name":"GM2-gangliosidosis, variant B1","type":"related"},{"name":"Hex A pseudodeficiency","type":"exact"},{"name":"TAY-Sachs disease","type":"related"},{"name":"TSD","type":"related"},{"name":"Tay Sachs Disease","type":"exact"},{"name":"Tay-Sachs disease","type":"exact"},{"name":"Tay-Sachs disease, juvenile","type":"related"},{"name":"Tay-Sachs disease, pseudo-Ab variant","type":"related"},{"name":"Tay-Sachs disease, variant B1","type":"related"},{"name":"disease, Tay-Sachs","type":"exact"},{"name":"gangliosidosis GM2, type 1","type":"related"},{"name":"hexa deficiency","type":"related"},{"name":"hexosaminidase A deficiency","type":"exact"},{"name":"hexosaminidase a deficiency","type":"related"},{"name":"hexosaminidase a deficiency, adult type","type":"related"},{"name":"hexosaminidase alpha-subunit deficiency (variant B)","type":"related"},{"name":"sphingolipidosis, Tay-Sachs","type":"related"}],"termid":"MONDO:0010100","xrefs":{"Monarch":{"xref_id":"0010100"}}}


id: PBO:0056280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2B member 2","termid":"PBO:0056280"}


id: PBO:0056005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4","termid":"PBO:0056005"}


id: GO:0003777
data:
  {"annotated_genes":["SJAG_01546","SJAG_04745","SJAG_01297","SJAG_02286","SJAG_00773","SJAG_00332","SJAG_01613","SJAG_00930","SJAG_00042","SJAG_02336","SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61312],"is_not":false,"summary":null,"term":"GO:0003777"},{"annotations":[94538,96536,66088,99000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008569"},{"annotations":[78525,103505,75712,77483,108022,75470,103303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule, driven by ATP hydrolysis.","definition_xrefs":["PMID:32684327","PMID:19686686","PMID:32842864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"polypeptide conformation or assembly isomerase activity","termid":"GO:0120544"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824","GO:0003774"],"is_obsolete":false,"name":"microtubule motor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-265160","Reactome:R-HSA-177479","Reactome:R-HSA-9610627","GO:1990939"],"synonyms":[{"name":"ATP-dependent microtubule motor activity","type":"exact"},{"name":"axonemal motor activity","type":"narrow"},{"name":"dynein","type":"broad"},{"name":"dynein ATPase activity","type":"narrow"},{"name":"kinesin","type":"broad"},{"name":"kinesin motor activity","type":"narrow"},{"name":"kinetochore motor activity","type":"narrow"}],"termid":"GO:0003777","terms_by_termid":{"GO:0003777":null,"GO:0008569":null,"GO:0008574":null}}


id: PBO:0052846
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-2","termid":"PBO:0052846"}


id: GO:0044617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the relaxation of smooth muscle in a second organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in smooth muscle relaxation in another organism (obsolete GO:0044617)","synonyms":[{"name":"modulation of relaxation of smooth muscle in another organism","type":"related"},{"name":"modulation of relaxation of smooth muscle in other organism","type":"exact"},{"name":"regulation of relaxation of smooth muscle in other organism","type":"exact"}],"termid":"GO:0044617"}


id: GO:0034206
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex formed by the association of a distinct set of general and specific transcription factors with a region of enhancer DNA. The cooperative assembly of an enhanceosome confers specificity of transcriptional regulation.","definition_xrefs":["PMID:11250145","PMID:17574024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"enhanceosome","secondary_identifiers":["Wikipedia:Enhanceosome"],"termid":"GO:0034206"}


id: MONDO:0054849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 29","secondary_identifiers":["MEDGEN:1648318","DOID:0112155","OMIM:618077","UMLS:C4748083"],"synonyms":[{"name":"IBD29","type":"related"},{"name":"inflammatory bowel disease 29","type":"exact"}],"termid":"MONDO:0054849","xrefs":{"Monarch":{"xref_id":"0054849"}}}


id: MONDO:1010319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, non-human animal","secondary_identifiers":["OMIA:000219"],"termid":"MONDO:1010319","xrefs":{"Monarch":{"xref_id":"1010319"}}}


id: PBO:0057493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 611","termid":"PBO:0057493"}


id: MOD:01243
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a C-terminal residue to the potassium carboxylate salt.","definition_xrefs":["Unimod:530#C-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopotassium salt","termid":"MOD:01072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium carboxylate C-terminal residue","synonyms":[{"name":"Cation:K","type":"related"},{"name":"Replacement of proton by potassium","type":"related"}],"termid":"MOD:01243"}


id: MONDO:0002055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare, benign sweat gland neoplasm that affects the breast. It is characterized by the proliferation of basaloid epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"benign spiradenoma","termid":"MONDO:0003448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign eccrine breast spiradenoma","secondary_identifiers":["UMLS:C1332492","MEDGEN:231933","DOID:1616","NCIT:C5193"],"synonyms":[{"name":"benign breast eccrine spiradenoma","type":"exact"},{"name":"benign eccrine breast spiradenoma","type":"exact"},{"name":"benign eccrine spiradenoma of breast","type":"exact"},{"name":"benign eccrine spiradenoma of the breast","type":"exact"}],"termid":"MONDO:0002055","xrefs":{"Monarch":{"xref_id":"0002055"}}}


id: GO:0046358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of butyrate, the anion of butyric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyrate metabolic process","termid":"GO:0019605"},{"relation_name":"is_a","term_name":"short-chain fatty acid biosynthetic process","termid":"GO:0051790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"butyrate biosynthetic process","secondary_identifiers":["GO:0043439"],"synonyms":[{"name":"butanoic acid anabolism","type":"exact"},{"name":"butanoic acid biosynthesis","type":"exact"},{"name":"butanoic acid biosynthetic process","type":"exact"},{"name":"butanoic acid formation","type":"exact"},{"name":"butanoic acid synthesis","type":"exact"},{"name":"butyrate anabolism","type":"exact"},{"name":"butyrate biosynthesis","type":"exact"},{"name":"butyrate formation","type":"exact"},{"name":"butyrate synthesis","type":"exact"}],"termid":"GO:0046358"}


id: PR:O14301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00809","PANTHER:PTHR19856:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C9G1.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.05","secondary_identifiers":["UniProtKB:O14301"],"synonyms":[{"name":"Spom972h-WDR1","type":"exact"}],"termid":"PR:O14301"}


id: GO:1902721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of prolactin secretion.","definition_xrefs":["PMID:16159377","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"prolactin secretion","termid":"GO:0070459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of prolactin secretion","synonyms":[{"name":"down regulation of prolactin secretion","type":"exact"},{"name":"down-regulation of prolactin secretion","type":"exact"},{"name":"downregulation of prolactin secretion","type":"exact"},{"name":"inhibition of prolactin secretion","type":"narrow"}],"termid":"GO:1902721"}


id: FYPO:0008149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of non-functional non-coding RNA transcribed measured in a cell is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased non functional ncRNA level","termid":"FYPO:0008149"}


id: PBO:0071155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 20","termid":"PBO:0071155"}


id: GO:0070622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity; the bovine complex contains disulfide-linked homodimers of 166- and 51-kDa subunits and two identical, noncovalently associated 56-kDa subunits.","definition_xrefs":["PMID:8940155","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex","synonyms":[{"name":"N-acetylglucosamine-1-phosphotransferase complex","type":"related"},{"name":"UDP-N-acetylglucosamine:lysosomal-enzyme N-acetylglucosamine-1-phosphotransferase complex","type":"exact"}],"termid":"GO:0070622"}


id: PBO:0046262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMC1 antisense RNA 1","termid":"PBO:0046262"}


id: GO:0090303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"is_a","term_name":"positive regulation of response to wounding","termid":"GO:1903036"},{"relation_name":"positively_regulates","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of wound healing","termid":"GO:0090303"}


id: GO:0052177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host xylan (obsolete GO:0052177)","termid":"GO:0052177"}


id: PBO:0057519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 637","termid":"PBO:0057519"}


id: PBO:0109363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 2","termid":"PBO:0109363"}


id: GO:0006118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of electrons from an electron donor to an electron acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transport (obsolete GO:0006118)","synonyms":[{"name":"6-phosphofructokinase reduction","type":"related"},{"name":"dihydrobiopterin reduction","type":"related"},{"name":"dihydrolipoamide reduction","type":"related"},{"name":"dihydrolipoylprotein reduction","type":"related"},{"name":"dihydropteridine reduction","type":"related"},{"name":"electron transfer","type":"exact"},{"name":"electron transport","type":"exact"},{"name":"other pathways of electron transport","type":"related"},{"name":"oxidized glutathione reduction","type":"related"},{"name":"protein-disulfide reduction","type":"related"}],"termid":"GO:0006118"}


id: GO:0120117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The random-like motility observed for T cells in lymph nodes which enhances surveillance of antigens presented by major histocompatibility complex (MHC) molecules on antigen presenting cells (APCs).","definition_xrefs":["PMID:25083865","GOC:add","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell meandering migration","synonyms":[{"name":"T cell meandering search","type":"exact"},{"name":"lymph node surveillance","type":"related"}],"termid":"GO:0120117"}


id: GO:2000302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle exocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"positive regulation of regulated secretory pathway","termid":"GO:1903307"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle exocytosis","termid":"GO:2000300"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle exocytosis","termid":"GO:2000302"}


id: MONDO:0009149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia-intellectual disability-central nervous system malformation syndrome is a rare, multiple developmental anomalies syndrome characterized by the triad of ectodermal dysplasia (mostly hypohidrotic with dry skin and reduced sweating and sparse, fair scalp hair, eyebrows and eyelashes), severe intellectual disability and variable central nervous system anomalies (cerebellar hypoplasia, dilatation of ventricles, corpus callosum agenesis, Dandy-Walker malformation). Distinct craniofacial dysmorphism with macrocephaly, frontal bossing, midfacial hypoplasia and high arched or cleft palate, as well as cryptorchidism, feeding difficulties and hypotonia, are associated. There have been no further descriptions in the literature since 1998.","definition_xrefs":["Orphanet:1812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia-intellectual disability-central nervous system malformation syndrome","secondary_identifiers":["MEDGEN:347363","MESH:C565605","GARD:16578","OMIM:225040","UMLS:C1857053"],"synonyms":[{"name":"ectodermal dysplasia, hypohidrotic, with hypothyroidism and agenesis of the corpus callosum","type":"related"}],"termid":"MONDO:0009149","xrefs":{"Monarch":{"xref_id":"0009149"}}}


id: MONDO:1011279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Age-related macular degeneration that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration, non-human animal","termid":"MONDO:1010351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age-related macular degeneration, Rhesus monkey","secondary_identifiers":["OMIA:002142-9544"],"termid":"MONDO:1011279","xrefs":{"Monarch":{"xref_id":"1011279"}}}


id: GO:0048310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The partitioning of nuclei between daughter cells at cell division.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleus inheritance (obsolete GO:0048310)","synonyms":[{"name":"cell nucleus inheritance","type":"exact"}],"termid":"GO:0048310"}


id: GO:0006884
data:
  {"annotated_genes":["SJAG_04668","SJAG_03401","SJAG_02019","SJAG_02532"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73271,95438,113666],"is_not":false,"summary":null,"term":"GO:0006884"},{"annotations":[92167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"}]},"cv_name":"biological_process","definition":"Any process involved in maintaining the steady state of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell size","termid":"GO:0008361"},{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02019":null,"SJAG_02532":null,"SJAG_03401":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell volume homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell volume","type":"exact"}],"termid":"GO:0006884","terms_by_termid":{"GO:0006884":null,"GO:0009992":null}}


id: PBO:0040339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 5","termid":"PBO:0040339"}


id: FYPO:0001562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular histidine level","secondary_identifiers":["FYPO:0001620"],"synonyms":[{"name":"decreased cellular L-histidine level","type":"exact"},{"name":"decreased cellular histidine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular histidine level during vegetative growth","type":"exact"},{"name":"decreased histidine accumulation","type":"related"},{"name":"reduced cellular histidine level","type":"exact"}],"termid":"FYPO:0001562"}


id: GO:0046258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid, in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic 2,4,6-trinitrotoluene metabolic process","termid":"GO:0018975"},{"relation_name":"is_a","term_name":"2,4,6-trinitrotoluene catabolic process","termid":"GO:0046256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic 2,4,6-trinitrotoluene catabolic process","synonyms":[{"name":"anaerobic 2,4,6-trinitrotoluene breakdown","type":"exact"},{"name":"anaerobic 2,4,6-trinitrotoluene catabolism","type":"exact"},{"name":"anaerobic 2,4,6-trinitrotoluene degradation","type":"exact"}],"termid":"GO:0046258"}


id: GO:1905718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any microtubule end that is part of a mitotic spindle astral microtubule.","definition_xrefs":["PMID:11007487","GO_REF:0000064","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic spindle astral microtubule end (obsolete GO:1905718)","synonyms":[{"name":"mitotic spindle astral microtubule tip","type":"exact"}],"termid":"GO:1905718"}


id: GO:0045656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of monocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte differentiation","termid":"GO:0002762"},{"relation_name":"is_a","term_name":"regulation of monocyte differentiation","termid":"GO:0045655"},{"relation_name":"negatively_regulates","term_name":"monocyte differentiation","termid":"GO:0030224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte differentiation","synonyms":[{"name":"down regulation of monocyte differentiation","type":"exact"},{"name":"down-regulation of monocyte differentiation","type":"exact"},{"name":"downregulation of monocyte differentiation","type":"exact"},{"name":"inhibition of monocyte differentiation","type":"narrow"}],"termid":"GO:0045656"}


id: GO:0031138
data:
  {"annotated_genes":["SJAG_04394","SJAG_01699","SJAG_02266","SJAG_01919","SJAG_03048","SJAG_02921","SJAG_04026","SJAG_00600","SJAG_01401","SJAG_02723","SJAG_00472","SJAG_01084","SJAG_00145","SJAG_02730","SJAG_04682","SJAG_01311","SJAG_00526","SJAG_02592","SJAG_04312","SJAG_03081","SJAG_02426","SJAG_02773","SJAG_01254","SJAG_02444","SJAG_00975","SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88570,91852,92982,96146,101375,102115,104673,116304],"is_not":false,"summary":null,"term":"GO:0031138"},{"annotations":[94915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140538"},{"annotations":[106253,115274,105668,106604,115813,93989,91172,105574,92691,87966,114214,100298,94129,104255,101602,108766,106408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010515"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00975":null,"SJAG_01084":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_01919":null,"SJAG_02266":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02921":null,"SJAG_03048":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04394":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"negatively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"negative regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of conjugation with cellular fusion","type":"exact"},{"name":"down-regulation of conjugation with cellular fusion","type":"exact"},{"name":"downregulation of conjugation with cellular fusion","type":"exact"},{"name":"inhibition of conjugation with cellular fusion","type":"narrow"}],"termid":"GO:0031138","terms_by_termid":{"GO:0010515":null,"GO:0031138":null,"GO:0140538":null}}


id: MONDO:0017400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoplastic pancreas-intestinal atresia-hypoplastic gallbladder syndrome is a rare, potentially fatal, genetic, visceral malformation syndrome characterized by neonatal diabetes, hypoplastic or annular pancreas, duodenal and jejunal atresia, as well as gallbladder aplasia or hypoplasia. Patients typically present intrauterine growth restriction, failure to thrive, malnutrition, intestinal malrotation, malabsorption, conjugated hyperbilirubinemia, acholia and infections. Cardiac anomalies may also be associated.","definition_xrefs":["Orphanet:293864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoplastic pancreas-intestinal atresia-hypoplastic gallbalder syndrome","secondary_identifiers":["MEDGEN:411637","OMIM:615710","GARD:5237","UMLS:C2748662"],"synonyms":[{"name":"MTCHRS","type":"related"},{"name":"Mitchell-Riley syndrome","type":"exact"},{"name":"diabetes, neonatal, with pancreatic hypoplasia, intestinal atresia, and gallbladder aplasia or hypoplasia","type":"related"},{"name":"hypoplastic pancreas-intestinal atresia-hypoplastic gallbalder syndrome","type":"exact"},{"name":"hypoplastic pancreas-intestinal atresia-hypoplastic gallbladder syndrome","type":"related"}],"termid":"MONDO:0017400","xrefs":{"Monarch":{"xref_id":"0017400"}}}


id: MONDO:1012353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperornithinemia, hyperammonemia, and homocitrullinuria syndrome, non-human animal","termid":"MONDO:1011716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperornithinemia, hyperammonemia, and homocitrullinuria syndrome, horse","secondary_identifiers":["OMIA:001290-9796"],"termid":"MONDO:1012353","xrefs":{"Monarch":{"xref_id":"1012353"}}}


id: MONDO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the lacrimal duct.","definition_xrefs":["NCIT:C3567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal system cancer","termid":"MONDO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"lacrimal duct cancer","secondary_identifiers":["ICD9:190.7","SCTID:188274004","MEDGEN:57795","NCIT:C175319","DOID:12756","UMLS:C0153631"],"synonyms":[{"name":"cancer of lacrimal drainage system","type":"exact"},{"name":"lacrimal drainage system cancer","type":"exact"},{"name":"malignant lacrimal drainage system neoplasm","type":"exact"},{"name":"malignant lacrimal duct neoplasm","type":"exact"},{"name":"malignant lacrimal duct tumor","type":"exact"},{"name":"malignant lacrimal duct tumour","type":"exact"},{"name":"malignant neoplasm of lacrimal drainage system","type":"exact"},{"name":"malignant neoplasm of lacrimal duct","type":"exact"},{"name":"malignant neoplasm of the lacrimal duct","type":"exact"},{"name":"malignant tumor of lacrimal duct","type":"exact"},{"name":"malignant tumor of the lacrimal duct","type":"exact"},{"name":"malignant tumour of lacrimal duct","type":"exact"},{"name":"malignant tumour of the lacrimal duct","type":"exact"}],"termid":"MONDO:0001580","xrefs":{"Monarch":{"xref_id":"0001580"}}}


id: GO:1900590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of violaceol I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"violaceol I metabolic process","termid":"GO:1900588"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"violaceol I biosynthetic process","synonyms":[{"name":"violaceol I anabolism","type":"exact"},{"name":"violaceol I biosynthesis","type":"exact"},{"name":"violaceol I formation","type":"exact"},{"name":"violaceol I synthesis","type":"exact"}],"termid":"GO:1900590"}


id: PBO:0087118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING domain E3 ubiquitin ligase; involved in ubiquitin-mediated degradation of non-stop proteins and translationally stalled ER membrane proteins; component of ribosome-bound RQC (ribosome quality control) complex; degrades products of mRNAs lacking a termination codon regardless of a poly(A) tail; functional connections to chromatin modification; homolog of mouse Listerin, mutations in which reported to cause neurodegeneration","termid":"PBO:0087118"}


id: FYPO:0004295
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[118890],"is_not":false,"summary":null,"term":"FYPO:0004295"},{"annotations":[119321,119320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype characterized by the presence of more than one septum in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"is_a","term_name":"septated cell","termid":"FYPO:0004296"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_04551":null},"genotype_count":4,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00118","SJAG_01143"],"name":"multiseptate cell","references_by_uniquename":{"PMID:25866389":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00118","SJAG_01143","SJAG_04551"],"single_locus_genotype_uniquenames":["pmk1delta","mid1delta","mid2delta"],"termid":"FYPO:0004295","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000207":null,"FYPO:0000118":null,"FYPO:0004295":null,"FYPO_EXT:0000002":null}}


id: GO:0009481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.9.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete aa3-type cytochrome c oxidase (obsolete GO:0009481)","synonyms":[{"name":"aa3-type cytochrome c oxidase","type":"exact"}],"termid":"GO:0009481"}


id: GO:1990967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a toxin into, out of or within a cell, or between cells where two or more organisms of the same or different species are involved.","definition_xrefs":["PMID:18191792","GOC:bf","GOC:PARL","PMID:22042847"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism toxin transport (obsolete GO:1990967)","synonyms":[{"name":"typhoid toxin transport","type":"narrow"}],"termid":"GO:1990967"}


id: MONDO:0009745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis 5 (CLN5-NCL) is a rare condition that affects the nervous system. Signs and symptoms of the condition generally develop between ages 4.5 and 7 years, although later onset cases have been reported. Affected people may experience loss of muscle coordination (ataxia), seizures that do not respond to medications, muscle twitches (myoclonus), visual impairment, and cognitive/motor decline. It occurs predominantly in the Finnish population. CLN5-NCL is caused by changes (mutations) in the CLN5 gene and is inherited in an autosomal recessive manner. Treatment options are limited to therapies that can help relieve some of the symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"late infantile neuronal ceroid lipofuscinosis","termid":"MONDO:0015674"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis","termid":"MONDO:0016295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis 5","secondary_identifiers":["OMIM:256731","DOID:0110728","MESH:C575534","Orphanet:228360","UMLS:C1850442","GARD:1223","MEDGEN:376792"],"synonyms":[{"name":"CLN5","type":"exact"},{"name":"CLN5 disease","type":"related"},{"name":"CLN5 disease, adult","type":"related"},{"name":"CLN5 disease, juvenile","type":"related"},{"name":"CLN5 disease, late infantile (subtype)","type":"related"},{"name":"CLN5 neuronal ceroid lipofuscinosis","type":"exact"},{"name":"Finnish Vlincl","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, 5","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, 5, variable Age at onset","type":"related"},{"name":"ceroid lipofuscinosis, neuronal, type 5","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 5 variable age of onset","type":"exact"},{"name":"neuronal ceroid lipofuscinosis Finnish variant","type":"related"},{"name":"neuronal ceroid lipofuscinosis caused by mutation in CLN5","type":"exact"},{"name":"neuronal ceroid lipofuscinosis type 5","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, late infantile, Finnish variant","type":"related"}],"termid":"MONDO:0009745","xrefs":{"Monarch":{"xref_id":"0009745"}}}


id: PBO:0079859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B8 (pseudogene)","termid":"PBO:0079859"}


id: PBO:0072812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 8","termid":"PBO:0072812"}


id: PR:Q9UUL2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad57 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUL2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp57 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.07","synonyms":[{"name":"RAD57 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rad57","type":"exact"}],"termid":"PR:Q9UUL2"}


id: PBO:0047527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 1","termid":"PBO:0047527"}


id: PBO:0001714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type","termid":"PBO:0001714"}


id: PBO:0089628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase","termid":"PBO:0089628"}


id: PBO:0051270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 1","termid":"PBO:0051270"}


id: PBO:0074367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 4 pseudogene 1","termid":"PBO:0074367"}


id: PBO:0063184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX homeobox 4","termid":"PBO:0063184"}


id: PBO:0045793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER degradation enhancing alpha-mannosidase like protein 3","termid":"PBO:0045793"}


id: MONDO:0000141
data:
  {"annotated_genes":["SJAG_00213","SJAG_04699","SJAG_04884","SJAG_01082","SJAG_03436","SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859575"},{"annotations":[85386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859576"},{"annotations":[86552,86553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009759"},{"annotations":[85701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013582"},{"annotations":[85384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859346"}]},"cv_name":"mondo","definition":"Mosaic variegated aneuploidy (MVA) syndrome is a chromosomal anomaly characterized by multiple mosaic aneuploidies that leads to a variety of phenotypic abnormalities and cancer predisposition.","definition_xrefs":["Orphanet:1052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00213":null,"SJAG_01082":null,"SJAG_02795":null,"SJAG_03436":null,"SJAG_04699":null,"SJAG_04884":null},"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4551972","icd11.foundation:398235351","ICD9:758.89","MESH:C536987","SCTID:700056005","GARD:3007","OMIMPS:257300","DOID:0080688","MEDGEN:1641418"],"synonyms":[{"name":"Warburton-Anyane-Yeboa syndrome","type":"exact"}],"termid":"MONDO:0000141","terms_by_termid":{"MONDO:0009759":null,"MONDO:0013582":null,"MONDO:0859346":null,"MONDO:0859575":null,"MONDO:0859576":null},"xrefs":{"Monarch":{"xref_id":"0000141"}}}


id: MONDO:0008045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy-progressive myoclonic epilepsy syndrome is characterized by hereditary myoclonus and progressive distal muscular atrophy. Less than 10 cases have been reported. Treatment with clonazepam results in complete and lasting improvement of the myoclonus.","definition_xrefs":["Orphanet:2590"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"variable-age onset epilepsy syndrome","termid":"MONDO:0100036"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"ASAH1-related sphingolipidosis","termid":"MONDO:0100524"},{"relation_name":"is_a","term_name":"ASAH1-related disorders","termid":"MONDO:0800460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002561","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"spinal muscular atrophy-progressive myoclonic epilepsy syndrome","secondary_identifiers":["SCTID:703524005","UMLS:C1834569","MEDGEN:371854","OMIM:159950","ICD9:345.10","GARD:3875","MESH:C537563","DOID:0111527"],"synonyms":[{"name":"Jankovic Rivera syndrome","type":"related"},{"name":"Jankovic-Rivera syndrome","type":"exact"},{"name":"SMAPME","type":"related"},{"name":"hereditary myoclonus and progressive distal muscular atrophy","type":"related"},{"name":"hereditary myoclonus-progressive distal muscular atrophy syndrome","type":"exact"},{"name":"myoclonus hereditary progressive distal muscular atrophy","type":"related"},{"name":"myoclonus, hereditary, with progressive distal muscular atrophy","type":"related"},{"name":"spinal muscular atrophy with progressive myoclonic epilepsy","type":"related"}],"termid":"MONDO:0008045","xrefs":{"Monarch":{"xref_id":"0008045"}}}


id: GO:1900680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferricrocin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ferricrocin biosynthetic process","termid":"GO:1900678"},{"relation_name":"is_a","term_name":"positive regulation of ferrichrome biosynthetic process","termid":"GO:1905570"},{"relation_name":"positively_regulates","term_name":"ferricrocin biosynthetic process","termid":"GO:0031171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferricrocin biosynthetic process","synonyms":[{"name":"activation of ferricrocin anabolism","type":"exact"},{"name":"activation of ferricrocin biosynthesis","type":"exact"},{"name":"activation of ferricrocin biosynthetic process","type":"narrow"},{"name":"activation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of ferricrocin formation","type":"exact"},{"name":"activation of ferricrocin synthesis","type":"exact"},{"name":"positive regulation of ferricrocin anabolism","type":"exact"},{"name":"positive regulation of ferricrocin biosynthesis","type":"exact"},{"name":"positive regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of ferricrocin formation","type":"exact"},{"name":"positive regulation of ferricrocin synthesis","type":"exact"},{"name":"up regulation of ferricrocin anabolism","type":"exact"},{"name":"up regulation of ferricrocin biosynthesis","type":"exact"},{"name":"up regulation of ferricrocin biosynthetic process","type":"exact"},{"name":"up regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of ferricrocin formation","type":"exact"},{"name":"up regulation of ferricrocin synthesis","type":"exact"},{"name":"up-regulation of ferricrocin anabolism","type":"exact"},{"name":"up-regulation of ferricrocin biosynthesis","type":"exact"},{"name":"up-regulation of ferricrocin biosynthetic process","type":"exact"},{"name":"up-regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of ferricrocin formation","type":"exact"},{"name":"up-regulation of ferricrocin synthesis","type":"exact"},{"name":"upregulation of ferricrocin anabolism","type":"exact"},{"name":"upregulation of ferricrocin biosynthesis","type":"exact"},{"name":"upregulation of ferricrocin biosynthetic process","type":"exact"},{"name":"upregulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of ferricrocin formation","type":"exact"},{"name":"upregulation of ferricrocin synthesis","type":"exact"}],"termid":"GO:1900680"}


id: MONDO:0010837
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[85440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"}]},"cv_name":"mondo","definition":"Hyperfunction of the parathyroid glands resulting in the overproduction of parathyroid hormone. It is caused by parathyroid adenoma, parathyroid hyperplasia, parathyroid carcinoma, and multiple endocrine neoplasia. It is associated with hypercalcemia and hypophosphatemia. Signs and symptoms include weakness, fatigue, nausea, vomiting, constipation, depression, bone pain, osteoporosis, cystic bone lesions, and kidney stones.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperparathyroidism","termid":"MONDO:0001741"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"is_obsolete":false,"name":"primary hyperparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0008519","UMLS:C0221002","HP:0008200","icd11.foundation:817194045","ICD9:252.01","MEDGEN:66354","SCTID:36348003","NCIT:C48280","MESH:D049950","DOID:11202"],"synonyms":[{"name":"primary hyperparathyroidism","type":"exact"},{"name":"primary hyperparathyroidism (disease)","type":"exact"}],"termid":"MONDO:0010837","terms_by_termid":{"MONDO:0007767":null,"MONDO:0007768":null},"xrefs":{"Monarch":{"xref_id":"0010837"}}}


id: PBO:0070883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 15","termid":"PBO:0070883"}


id: PBO:0013805
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HUT1","termid":"PBO:0013805"}


id: PBO:0091626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formamidase-like protein, implicated in cellular detoxification","termid":"PBO:0091626"}


id: PBO:0040266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atlastin GTPase 1","termid":"PBO:0040266"}


id: MONDO:0032609
data:
  {"annotated_genes":["SJAG_04639"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86011],"is_not":false,"summary":null,"term":"MONDO:0032609"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04639":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618225","MEDGEN:1648324","DOID:0112082","UMLS:C4748753","GARD:16314"],"synonyms":[{"name":"MC1DN4","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 4","type":"related"}],"termid":"MONDO:0032609","terms_by_termid":{"MONDO:0032609":null},"xrefs":{"Monarch":{"xref_id":"0032609"}}}


id: PBO:0029387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_at_Thr-Pro_site_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029387"}


id: PBO:0080310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 74 pseudogene","termid":"PBO:0080310"}


id: PBO:0087687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the NuA4 acetyltransferase complex; this complex acetylates histone H4 and NuA3 acetyltransferase complex that acetylates histone H3","termid":"PBO:0087687"}


id: PBO:0042247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 9","termid":"PBO:0042247"}


id: MONDO:0060778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Fanconi renotubular syndrome that occurs in an adult. Adult Fanconi syndrome is typically acquired.","definition_xrefs":["MONDO:patterns/adult"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi renotubular syndrome","termid":"MONDO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"adult Fanconi syndrome","secondary_identifiers":["MEDGEN:137960","UMLS:C0341703","NCIT:C4377"],"synonyms":[{"name":"adult Fanconi syndrome","type":"exact"},{"name":"adult Fanconi's syndrome","type":"exact"}],"termid":"MONDO:0060778","xrefs":{"Monarch":{"xref_id":"0060778"}}}


id: PBO:0063725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerophosphate synthase 1","termid":"PBO:0063725"}


id: PBO:0082567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone that facilitates the assembly of cytochrome c oxidase; integral to the mitochondrial inner membrane; interacts with a subcomplex of subunits VII, VIIa, and VIII (Cox7p, Cox9p, and Cox8p) but not with the holoenzyme","termid":"PBO:0082567"}


id: GO:2001023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to xenobiotic stimulus","termid":"GO:0009410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to drug","synonyms":[{"name":"regulation of drug resistance","type":"related"},{"name":"regulation of drug susceptibility/resistance","type":"related"}],"termid":"GO:2001023"}


id: MONDO:0032756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long qt syndrome 8","secondary_identifiers":["OMIM:618447","DOID:0110649"],"synonyms":[{"name":"LONG QT SYNDROME 8","type":"related"},{"name":"LQT8","type":"related"}],"termid":"MONDO:0032756","xrefs":{"Monarch":{"xref_id":"0032756"}}}


id: MONDO:0015291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Herpes simplex (HSV) stromal keratitis is an infectious ocular disease of either necrotizing or non-necrotizing form, due to an HSV infection, and characterized by corneal stromal necrosis, inflammation, ulceration and infiltration by leukocytes. Corneal perforation and blindness can also occur in severe cases.","definition_xrefs":["Orphanet:137599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex virus keratitis","termid":"MONDO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"stromal keratitis","secondary_identifiers":["MEDGEN:727306","GARD:19879","icd11.foundation:1665288755","UMLS:C1318020"],"termid":"MONDO:0015291","xrefs":{"Monarch":{"xref_id":"0015291"}}}


id: MONDO:0015950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited skin tumor (obsolete MONDO:0015950)","secondary_identifiers":["Orphanet:183487"],"synonyms":[{"name":"genetic skin tumor","type":"related"},{"name":"genetic skin tumour","type":"related"}],"termid":"MONDO:0015950","xrefs":{"Monarch":{"xref_id":"0015950"}}}


id: GO:1900847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of naphtho-gamma-pyrone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900846"},{"relation_name":"negatively_regulates","term_name":"naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of naphtho-gamma-pyrone biosynthetic process","synonyms":[{"name":"down regulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"down-regulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"downregulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"inhibition of naphtho-gamma-pyrone biosynthetic process","type":"narrow"}],"termid":"GO:1900847"}


id: GO:0042675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a compound eye cone cell, a cone-shaped cell, that focuses light in a compound eye.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye cone cell differentiation","secondary_identifiers":["GO:0042674"],"termid":"GO:0042675"}


id: PBO:0060519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARF antisense RNA 1","termid":"PBO:0060519"}


id: PBO:0043580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XII alpha 1 chain","termid":"PBO:0043580"}


id: PBO:0050008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemojuvelin BMP co-receptor","termid":"PBO:0050008"}


id: MONDO:0859086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked 110","secondary_identifiers":["OMIM:301095","MEDGEN:1823954","UMLS:C5774180"],"termid":"MONDO:0859086","xrefs":{"Monarch":{"xref_id":"0859086"}}}


id: MONDO:0016342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial isolated arrhythmogenic right ventricular dysplasia (ARVC) is the familial autosomal dominant form of ARVC, a heart muscle disease characterized by life-threatening ventricular arrhythmias with left bundle branch block configuration that may manifest with palpitations, ventricular tachycardia, syncope and sudden fatal attacks, and that is due to dystrophy and fibro-fatty replacement of the right ventricular myocardium that may lead to right ventricular aneurysms.","definition_xrefs":["Orphanet:217656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"},{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy","termid":"MONDO:0016587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial isolated arrhythmogenic right ventricular dysplasia","secondary_identifiers":["UMLS:C4274968","GARD:17129","icd11.foundation:460188584","MEDGEN:901869","SCTID:715865008","OMIMPS:107970"],"synonyms":[{"name":"familial isolated ARVC","type":"exact"},{"name":"familial isolated ARVD","type":"exact"},{"name":"familial isolated arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"familial isolated arrhythmogenic right ventricular dysplasia","type":"exact"},{"name":"familial isolated arrhythmogenic ventricular cardiomyopathy","type":"exact"},{"name":"familial isolated arrhythmogenic ventricular dysplasia","type":"exact"}],"termid":"MONDO:0016342","xrefs":{"Monarch":{"xref_id":"0016342"}}}


id: PBO:0047560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF13 antisense RNA 1","termid":"PBO:0047560"}


id: MONDO:0009488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratoconus posticus circumscriptus","secondary_identifiers":["MESH:C536151","OMIM:244600","MEDGEN:340922","UMLS:C1855645"],"synonyms":[{"name":"KPC","type":"related"},{"name":"Kpc with associated malformations","type":"related"},{"name":"keratoconus posticus CIRCUMSCRIPTUS","type":"related"},{"name":"keratoconus posticus circumscriptus","type":"exact"}],"termid":"MONDO:0009488","xrefs":{"Monarch":{"xref_id":"0009488"}}}


id: MOD:01022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 2-piperidinecarboxylic acid.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"deaminated residue","termid":"MOD:01160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-piperidinecarboxylic acid","synonyms":[{"name":"Pip","type":"exact"}],"termid":"MOD:01022"}


id: PBO:0074089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 5","termid":"PBO:0074089"}


id: MONDO:0100073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by a strain of Staphylococcus aureus that is non-susceptible to the action of the antibiotic, methicillin. The mechanism of resistance usually involves modification of normal or the presence of acquired penicillin binding proteins.","definition_xrefs":["MESH:D055624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcus aureus infection","termid":"MONDO:0005545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methicillin-resistant staphylococcus aureus infectious disease","secondary_identifiers":["EFO:0008555","UMLS:C0343401","MEDGEN:575565"],"synonyms":[{"name":"MRSA","type":"exact"}],"termid":"MONDO:0100073","xrefs":{"Monarch":{"xref_id":"0100073"}}}


id: GO:0008725
data:
  {"annotated_genes":["SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101335],"is_not":false,"summary":null,"term":"GO:0008725"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methyladenine + H2O = DNA with abasic site + 3-methyladenine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methyladenine and the deoxyribose sugar to remove the 3-methyladenine, leaving an abasic site.","definition_xrefs":["PMID:9224623","GOC:elh","EC:3.2.2.20","PMID:10872450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-3-methylbase glycosylase activity","termid":"GO:0043733"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-5189"],"synonyms":[{"name":"3-methyladenine DNA glycosylase I","type":"related"},{"name":"DNA glycosidase I activity","type":"related"},{"name":"DNA-3-methyladenine glycosidase I activity","type":"related"},{"name":"DNA-3-methyladenine glycosylase I activity","type":"exact"},{"name":"deoxyribonucleate 3-methyladenine glycosidase I","type":"related"}],"termid":"GO:0008725","terms_by_termid":{"GO:0008725":null}}


id: PBO:0066876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 176","termid":"PBO:0066876"}


id: PBO:0067072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 101, pseudogene","termid":"PBO:0067072"}


id: PBO:0063870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIGB opposite strand 1","termid":"PBO:0063870"}


id: MONDO:0014698
data:
  {"annotated_genes":["SJAG_00390"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84788],"is_not":false,"summary":null,"term":"MONDO:0014698"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00390":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microcephaly-intellectual disability-sensorineural hearing loss-epilepsy-abnormal muscle tone syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:457351","UMLS:C4225276","MEDGEN:895574","GARD:17804","OMIM:616577"],"synonyms":[{"name":"EHLMRS","type":"related"},{"name":"epilepsy, hearing loss, and intellectual disability syndrome","type":"related"},{"name":"epilepsy, hearing loss, and mental retardation syndrome","type":"related"},{"name":"microcephaly-intellectual disability-sensorineural deafness-epilepsy-abnormal muscle tone syndrome","type":"exact"},{"name":"neurodevelopmental disorder with hearing loss, seizures, and brain abnormalities","type":"exact"}],"termid":"MONDO:0014698","terms_by_termid":{"MONDO:0014698":null},"xrefs":{"Monarch":{"xref_id":"0014698"}}}


id: FYPO:0006278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of an O-linked glycan moiety of a nascent or mature glycoprotein differs from wild type.","definition_xrefs":["PomBase:mah","PMID:22988247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0003290","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abnormal O-linked glycoprotein glycan structure","synonyms":[{"name":"abnormal O-linked glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0006278"}


id: PBO:0040405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 6","termid":"PBO:0040405"}


id: GO:1905699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xenobiotic transmembrane export. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:krc","GOC:TermGenie","GO_REF:0000058","PMID:15198509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of response to drug","termid":"GO:2001023"},{"relation_name":"regulates","term_name":"xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1990961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","synonyms":[{"name":"regulation of drug transmembrane export","type":"narrow"},{"name":"regulation of xenobiotic transmembrane export","type":"narrow"}],"termid":"GO:1905699"}


id: GO:0010536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency or rate of activation of JAK (Janus Activated Kinase) protein. The activation of JAK protein is the process of introducing a phosphate group to a tyrosine residue of a JAK (Janus Activated Kinase) protein, thereby activating it.","definition_xrefs":["GOC:dph","GOC:tb","PMID:9135582"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of activation of Janus kinase activity (obsolete GO:0010536)","synonyms":[{"name":"positive regulation of activation of JAK protein","type":"exact"},{"name":"positive regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"positive regulation of activation of JAK1 protein","type":"narrow"},{"name":"positive regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"positive regulation of activation of JAK2 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of JAK protein","type":"related"},{"name":"positive regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of JAK2 protein","type":"narrow"}],"termid":"GO:0010536"}


id: GO:0060983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell derived from the epicardium acquires specialized features of a cardiac vascular smooth muscle cell. A cardiac vascular smooth muscle cell covers the heart vasculature and lacks transverse striations in its constituent fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac vascular smooth muscle cell differentiation","termid":"GO:0060983"}


id: PBO:0050031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ beta 3","termid":"PBO:0050031"}


id: PBO:0039245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member B1","termid":"PBO:0039245"}


id: GO:1903062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reverse cholesterol transport.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:23931754","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"regulates","term_name":"reverse cholesterol transport","termid":"GO:0043691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of reverse cholesterol transport","termid":"GO:1903062"}


id: GO:1901091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein tetramerization.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein oligomerization","termid":"GO:0032460"},{"relation_name":"is_a","term_name":"regulation of protein tetramerization","termid":"GO:1901090"},{"relation_name":"negatively_regulates","term_name":"protein tetramerization","termid":"GO:0051262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of protein tetramerization","synonyms":[{"name":"down regulation of protein tetramer assembly","type":"exact"},{"name":"down regulation of protein tetramer biosynthesis","type":"exact"},{"name":"down regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"down regulation of protein tetramer formation","type":"exact"},{"name":"down regulation of protein tetramerization","type":"exact"},{"name":"down-regulation of protein tetramer assembly","type":"exact"},{"name":"down-regulation of protein tetramer biosynthesis","type":"exact"},{"name":"down-regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"down-regulation of protein tetramer formation","type":"exact"},{"name":"down-regulation of protein tetramerization","type":"exact"},{"name":"downregulation of protein tetramer assembly","type":"exact"},{"name":"downregulation of protein tetramer biosynthesis","type":"exact"},{"name":"downregulation of protein tetramer biosynthetic process","type":"exact"},{"name":"downregulation of protein tetramer formation","type":"exact"},{"name":"downregulation of protein tetramerization","type":"exact"},{"name":"inhibition of protein tetramer assembly","type":"narrow"},{"name":"inhibition of protein tetramer biosynthesis","type":"narrow"},{"name":"inhibition of protein tetramer biosynthetic process","type":"narrow"},{"name":"inhibition of protein tetramer formation","type":"narrow"},{"name":"inhibition of protein tetramerization","type":"narrow"},{"name":"negative regulation of protein tetramer assembly","type":"exact"},{"name":"negative regulation of protein tetramer biosynthesis","type":"exact"},{"name":"negative regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"negative regulation of protein tetramer formation","type":"exact"}],"termid":"GO:1901091"}


id: MONDO:0016198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of plectin","secondary_identifiers":["GARD:20437","UMLS:C5680835","Orphanet:209196","MEDGEN:1842345"],"termid":"MONDO:0016198","xrefs":{"Monarch":{"xref_id":"0016198"}}}


id: PATO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's exhibiting no deviation from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"normal","synonyms":[{"name":"average","type":"related"}],"termid":"PATO:0000461"}


id: PBO:0074668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 54","termid":"PBO:0074668"}


id: FYPO:0000572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of mating projection assembly is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"increased rate of shmoo formation","synonyms":[{"name":"increased rate of conjugation tube formation","type":"exact"},{"name":"increased rate of mating projection assembly","type":"exact"},{"name":"increased rate of mating projection formation","type":"exact"},{"name":"increased rate of shmoo assembly","type":"exact"},{"name":"shmoo formation: increased rate","type":"related"}],"termid":"FYPO:0000572"}


id: GO:0097490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single sympathetic neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection extension","termid":"GO:1990138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic neuron projection extension","synonyms":[{"name":"sympathetic neurite extension","type":"narrow"},{"name":"sympathetic neuron process extension","type":"exact"},{"name":"sympathetic neuron protrusion extension","type":"exact"},{"name":"sympathetic neuronal cell projection extension","type":"exact"}],"termid":"GO:0097490"}


id: GO:1904019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an epithelial cell.","definition_xrefs":["GO_REF:0000085","GOC:TermGenie","PMID:19137015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell apoptotic process","synonyms":[{"name":"epithelial cell apoptosis","type":"narrow"},{"name":"epitheliocyte apoptosis","type":"narrow"},{"name":"epitheliocyte apoptotic process","type":"exact"}],"termid":"GO:1904019"}


id: MONDO:0017690
data:
  {"annotated_genes":["SJAG_02951","SJAG_03818","SJAG_02954","SJAG_01784"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[85805,85806,85807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009257"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"disorder of galactose metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1462194012","SCTID:237963003","UMLS:C0342745","Orphanet:308467","MEDGEN:575203","GARD:21308"],"termid":"MONDO:0017690","terms_by_termid":{"MONDO:0009257":null,"MONDO:0009258":null},"xrefs":{"Monarch":{"xref_id":"0017690"}}}


id: PBO:0071809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 4","termid":"PBO:0071809"}


id: PBO:0077184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 8","termid":"PBO:0077184"}


id: PBO:0088645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen54","termid":"PBO:0088645"}


id: PBO:0050292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocyte nuclear factor 4 gamma","termid":"PBO:0050292"}


id: PBO:0056830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056830"}


id: MONDO:0008743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stimmler syndrome is characterized by the association of microcephaly, low birth weight and severe intellectual deficit with dwarfism, small teeth and diabetes mellitus. Two cases have been described. Biochemical tests reveal the presence of high levels of alanine in the urine and elevated alanine, pyruvate and lactate levels in the blood.","definition_xrefs":["Orphanet:3199"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stimmler syndrome","secondary_identifiers":["UMLS:C1859965","OMIM:202900","SCTID:733072002","MESH:C565968","GARD:5026","MEDGEN:348505"],"synonyms":[{"name":"ALANINURIA with microcephaly, dwarfism, enamel hypoplasia, and diabetes mellitus","type":"related"},{"name":"Alaninuria with microcephaly, dwarfism, enamel hypoplasia and diabetes mellitus","type":"related"},{"name":"Stimmler syndrome","type":"exact"}],"termid":"MONDO:0008743","xrefs":{"Monarch":{"xref_id":"0008743"}}}


id: PBO:0065353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 3","termid":"PBO:0065353"}


id: PBO:0089352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi 4,6-pyruvylated galactose (PvGal) residue biosynthesis protein Pvg5","termid":"PBO:0089352"}


id: PATO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anteriorly.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior orientation","synonyms":[{"name":"anteriorly directly","type":"exact"}],"termid":"PATO:0002490"}


id: MOD:01579
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01579"}


id: MONDO:1030005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A somatic mosaic condition caused by a postzygotic mutation (c.1234 C>T p.Leu412Phe) in the SMO gene. Two overlapping clinical syndromes associated with this variant in SMO have been reported; Curry-Jones Syndrome (MIM:601707) and Happle-Tinschert Syndrome. The syndrome is characterized by cutaneous and skeletal manifestations such as linear hypo‐ or hyperpigmented lesions, basaloid follicular hamartomas, palmoplantar pitting, atrophoderma, hypertrichosis, polydactyly or syndactyly, rib anomalies (rudimentary ribs), and limb‐length anomalies. Craniofacial and dental abnormalities such as dysmorphic facies, macrocephaly, craniosynostosis, jaw tumors (ameloblastoma) have also been reported. Additional abnormalities impacting the gastrointestinal, cerebral, ophthalmic, and gonadal organs should also be considered. Some of these features include anal anomaly, colonic adenocarcinoma, severe constipation, myelofibrosis and smooth muscle hamartomas, malrotation, medulloblastoma, cerebral malformations, developmental delay, cataract, microphthalmia, coloboma, glaucoma, and cryptorchidism.","definition_xrefs":["PMID:27236920","PMID:7606318","PMID:31120550","PMID:30497210","PMID:32413283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic SMO syndrome","termid":"MONDO:1030005","xrefs":{"Monarch":{"xref_id":"1030005"}}}


id: PBO:0027973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_succinate_dehydrogenase_(ubiquinone)_activity","termid":"PBO:0027973"}


id: MONDO:0009470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Baraitser-Winter cerebrofrontofacial syndrome in which the cause of the disease is a mutation in the ACTB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Baraitser-Winter cerebrofrontofacial syndrome","termid":"MONDO:0017579"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Baraitser-Winter syndrome 1","secondary_identifiers":["MEDGEN:340943","UMLS:C1855722","GARD:15189","OMIM:243310","DOID:0081112"],"synonyms":[{"name":"ACTB Baraitser-Winter cerebrofrontofacial syndrome","type":"exact"},{"name":"ACTB-related BAFopathy","type":"exact"},{"name":"BRWS1","type":"related"},{"name":"Baraitser-WINTER syndrome 1","type":"related"},{"name":"Baraitser-Winter cerebrofrontofacial syndrome caused by mutation in ACTB","type":"exact"},{"name":"Baraitser-Winter syndrome 1","type":"exact"},{"name":"Baraitser-Winter syndrome type 1","type":"exact"},{"name":"Fryns-Aftimos syndrome","type":"exact"},{"name":"cerebrofrontofacial syndrome","type":"exact"},{"name":"cerebrooculofacial lymphatic syndrome","type":"related"},{"name":"chromosome 7P22 deletion syndrome","type":"related"},{"name":"intellectual disability with epilepsy and characteristic facies","type":"related"},{"name":"iris coloboma with ptosis, hypertelorism, and intellectual disability","type":"related"},{"name":"iris coloboma with ptosis, hypertelorism, and mental retardation","type":"related"},{"name":"mental retardation with epilepsy and characteristic facies","type":"related"},{"name":"pachygyria, intellectual disability, epilepsy, and characteristic facies","type":"related"},{"name":"pachygyria, mental retardation, epilepsy, and characteristic facies","type":"related"}],"termid":"MONDO:0009470","xrefs":{"Monarch":{"xref_id":"0009470"}}}


id: GO:0102677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + campesterol + O2 + NADPH = (22S)-22-hydroxycampesterol + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete campesterol,NADPH:oxygen oxidoreductase activity (obsolete GO:0102677)","termid":"GO:0102677"}


id: GO:0002306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD4-positive, gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta intraepithelial T cell differentiation","termid":"GO:0002304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"CD4-positive, gamma-delta intraepithelial T cell development","type":"related"},{"name":"CD4-positive, gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD4-positive, gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002306"}


id: PBO:0047724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 intronic transcript 1","termid":"PBO:0047724"}


id: PBO:0027750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_nitrogen_starvation","termid":"PBO:0027750"}


id: GO:0046422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: violaxanthin + 2 ascorbate = zeaxanthin + 2 dehydroascorbate + 2 H2O; and antheraxanthin + ascorbate = zeaxanthin + dehydroascorbate + H2O.","definition_xrefs":["GOC:ai","ISBN:0471331309","EC:1.23.5.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, reducing C-O-C group as acceptor","termid":"GO:0120546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"violaxanthin de-epoxidase activity","secondary_identifiers":["RHEA:32371"],"synonyms":[{"name":"VDE","type":"related"},{"name":"violaxanthin:ascorbate oxidoreductase activity","type":"related"}],"termid":"GO:0046422"}


id: GO:0106096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ceramide stimulus.","definition_xrefs":["PMID:18006463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ceramide","termid":"GO:0106096"}


id: PBO:0065717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 1","termid":"PBO:0065717"}


id: PBO:0040077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain containing 4","termid":"PBO:0040077"}


id: PBO:0066434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated endocrine specific protein 18","termid":"PBO:0066434"}


id: GO:0047758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylpropanoate + ATP = 2-methylpropanoyl phosphate + ADP + H+.","definition_xrefs":["EC:2.7.2.14","RHEA:24156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"ATP:2-methylpropanoate phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R04002","MetaCyc:BRANCHED-CHAIN-FATTY-ACID-KINASE-RXN"],"synonyms":[{"name":"ATP:2-methylpropanoate 1-phosphotransferase activity","type":"exact"},{"name":"ATP:2-methylpropanoate kinase activity","type":"exact"},{"name":"ATP:branched-chain-fatty-acid 1-phosphotransferase activity","type":"broad"},{"name":"ATP:isobutyrate 1-phosphotransferase activity","type":"exact"},{"name":"branched-chain fatty acid kinase activity","type":"broad"},{"name":"branched-chain-fatty-acid kinase activity","type":"broad"},{"name":"isobutyrate kinase activity","type":"broad"}],"termid":"GO:0047758"}


id: PBO:0075080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 130","termid":"PBO:0075080"}


id: PBO:0074553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 6","termid":"PBO:0074553"}


id: GO:1903538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:jz","PMID:25212395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of meiotic cell cycle process involved in oocyte maturation","synonyms":[{"name":"regulation of meiosis involved in oocyte maturation","type":"broad"}],"termid":"GO:1903538"}


id: PBO:0041822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine synthase 1","termid":"PBO:0041822"}


id: PBO:0042024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 82","termid":"PBO:0042024"}


id: GO:0045495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.","definition_xrefs":["PMID:17113380","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pole plasm","synonyms":[{"name":"germ plasm","type":"narrow"},{"name":"polar plasm","type":"exact"}],"termid":"GO:0045495"}


id: FYECO:0000125
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to exponential phase.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to exponential phase","termid":"FYECO:0000125"}


id: GO:0075502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Induction of endosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus through the endosomal pathway, and results in delivery of the virus contents into the host cell cytoplasm.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeabilization of host organelle membrane involved in viral entry into host cell","termid":"GO:0039665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome membrane permeabilization involved in viral entry into host cell","secondary_identifiers":["GO:0075518"],"synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by endosome membrane","type":"related"},{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by endosome membrane permeabilization","type":"related"}],"termid":"GO:0075502"}


id: PBO:0081956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida glycoprotein 3","termid":"PBO:0081956"}


id: PBO:0050285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H6 family homeobox 2","termid":"PBO:0050285"}


id: GO:0045955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of calcium ion-dependent exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"is_a","term_name":"negative regulation of regulated secretory pathway","termid":"GO:1903306"},{"relation_name":"negatively_regulates","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion-dependent exocytosis","synonyms":[{"name":"down regulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"down-regulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"downregulation of calcium ion-dependent exocytosis","type":"exact"},{"name":"inhibition of calcium ion-dependent exocytosis","type":"narrow"}],"termid":"GO:0045955"}


id: PBO:0084714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane localized ATP-dependent DNA helicase; required for the maintenance of the mitochondrial genome; not required for mitochondrial transcription; has homology to E. coli helicase uvrD","termid":"PBO:0084714"}


id: GO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior based on competition between males of the same species over access to resources such as females, dominance, status, etc. and characterized by noise, threats, and is often less injurious.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inter-male aggressive behavior","synonyms":[{"name":"inter-male aggression","type":"exact"}],"termid":"GO:0002121"}


id: GO:0102233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (cis)-crotonaldehyde + NADPH + H+ = butanal + NADP.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete crotonaldehyde redutase activity (obsolete GO:0102233)","termid":"GO:0102233"}


id: PBO:0039613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2","termid":"PBO:0039613"}


id: GO:0002278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a eosinophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil activation involved in immune response","synonyms":[{"name":"eosinophil activation during immune response","type":"related"}],"termid":"GO:0002278"}


id: PBO:0053981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1297","termid":"PBO:0053981"}


id: GO:0051461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of corticotropin hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of corticotropin secretion","termid":"GO:0051459"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"corticotropin secretion","termid":"GO:0051458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of corticotropin secretion","synonyms":[{"name":"activation of adrenocorticotropin secretion","type":"narrow"},{"name":"positive regulation of ACTH secretion","type":"exact"},{"name":"positive regulation of adrenocorticotropic hormone secretion","type":"exact"},{"name":"positive regulation of adrenocorticotropin secretion","type":"exact"},{"name":"positive regulation of adrenotropic hormone secretion","type":"exact"},{"name":"positive regulation of adrenotropin secretion","type":"exact"},{"name":"positive regulation of corticotropic hormone secretion","type":"exact"},{"name":"stimulation of adrenocorticotropin secretion","type":"narrow"},{"name":"up regulation of adrenocorticotropin secretion","type":"exact"},{"name":"up-regulation of adrenocorticotropin secretion","type":"exact"},{"name":"upregulation of adrenocorticotropin secretion","type":"exact"}],"termid":"GO:0051461"}


id: PBO:0077349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 88B","termid":"PBO:0077349"}


id: PBO:0050275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 5","termid":"PBO:0050275"}


id: PBO:0053415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 353","termid":"PBO:0053415"}


id: MONDO:1010155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutis laxa that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa, non-human animal","secondary_identifiers":["OMIA:002404"],"termid":"MONDO:1010155","xrefs":{"Monarch":{"xref_id":"1010155"}}}


id: GO:0048229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gametophyte over time, from its formation to the mature structure. The gametophyte is the gamete-producing individual or phase in the life cycle having alternation of generations. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["PO:0009004","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gametophyte development","synonyms":[{"name":"gametogenesis","type":"broad"}],"termid":"GO:0048229"}


id: GO:0004306
data:
  {"annotated_genes":["SJAG_04628"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75179],"is_not":false,"summary":null,"term":"GO:0004306"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + ethanolamine phosphate = diphosphate + CDP-ethanolamine.","definition_xrefs":["EC:2.7.7.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:2.7.7.14-RXN","Reactome:R-HSA-1483190","RHEA:24592"],"synonyms":[{"name":"CTP-phosphoethanolamine cytidylyltransferase activity","type":"related"},{"name":"CTP:ethanolamine-phosphate cytidylyltransferase activity","type":"exact"},{"name":"CTP:phosphoethanolamine cytidylyltransferase activity","type":"related"},{"name":"ET","type":"related"},{"name":"ethanolamine phosphate cytidylyltransferase activity","type":"related"},{"name":"phosphoethanolamine cytidylyltransferase activity","type":"exact"},{"name":"phosphorylethanolamine transferase activity","type":"broad"}],"termid":"GO:0004306","terms_by_termid":{"GO:0004306":null}}


id: PBO:0085320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 4,5-bisphosphate 5-phosphatase; role in secretion; localizes to the endoplasmic reticulum via the C-terminal tail; lacks the Sac1 domain and proline-rich region found in the other 3 INP proteins","termid":"PBO:0085320"}


id: FYPO:0006101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the morphology of cytoplasmic microtubules is abnormal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal interphase microtubules","synonyms":[{"name":"abnormal cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"abnormal interphase cytoplasmic microtubules","type":"exact"},{"name":"abnormal interphase microtubule morphology","type":"exact"},{"name":"abnormal interphase microtubule structure","type":"narrow"},{"name":"abnormal interphase microtubules during mitotic cell cycle","type":"related"},{"name":"abnormal interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006101"}


id: GO:0009744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sucrose","synonyms":[{"name":"response to sucrose stimulus","type":"exact"}],"termid":"GO:0009744"}


id: PBO:0017021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA 20/snR35","termid":"PBO:0017021"}


id: PBO:0046598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 8","termid":"PBO:0046598"}


id: GO:0075164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein beta subunit-mediated signal transduction in response to host (obsolete GO:0075164)","synonyms":[{"name":"negative regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075164"}


id: PR:O94599
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIMR family protein C622.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.11","synonyms":[{"name":"Spom972h-SPCC622.11","type":"exact"}],"termid":"PR:O94599"}


id: FYPO:0000366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA localization is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA localization during vegetative growth","termid":"FYPO:0000360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA localization","synonyms":[{"name":"RNA localization: decreased","type":"related"},{"name":"decreased RNA localisation","type":"exact"},{"name":"decreased RNA localization during mitotic cell cycle","type":"related"},{"name":"decreased RNA localization during vegetative growth","type":"exact"},{"name":"reduced RNA localization","type":"exact"}],"termid":"FYPO:0000366"}


id: GO:0003399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a cytoneme are shaped. A cytoneme is a long, thin and polarized actin-based cytoplasmic extension that projects from a cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoneme morphogenesis","termid":"GO:0003399"}


id: PBO:0091622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate O-methyltransferase Pcm2","termid":"PBO:0091622"}


id: PBO:0057876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-5","termid":"PBO:0057876"}


id: PBO:0060197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 19, oligomeric","termid":"PBO:0060197"}


id: PBO:0055738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lemur tyrosine kinase 2","termid":"PBO:0055738"}


id: PBO:0050872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH2 divergent transcript","termid":"PBO:0050872"}


id: PATO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in motor and sensory nerves by virtue of the bearer's ability to convey electricity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electrical conductivity","termid":"PATO:0001757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve conductivity","termid":"PATO:0001758"}


id: GO:0140523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A GTPase activity that mediates the joining of two lipid bilayers to form a single membrane.","definition_xrefs":["PMID:29663589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase activity","termid":"GO:0003924"},{"relation_name":"is_a","term_name":"fusogenic activity","termid":"GO:0140522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003924"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0003924"],"is_obsolete":false,"name":"GTPase-dependent fusogenic activity","synonyms":[{"name":"membrane fusion GTPase activity","type":"exact"}],"termid":"GO:0140523"}


id: GO:0018991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive behavior that results in the deposition of eggs (either fertilized or not) upon a surface or into a medium such as water.","definition_xrefs":["PMID:31164023","PMID:18050396","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive behavior","termid":"GO:0019098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"egg-laying behavior","secondary_identifiers":["Wikipedia:Oviposition","GO:0060403"],"synonyms":[{"name":"egg laying","type":"broad"},{"name":"egg-laying","type":"broad"},{"name":"oviposition","type":"exact"},{"name":"post-mating oviposition","type":"narrow"}],"termid":"GO:0018991"}


id: GO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an unfolded protein stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:add","PMID:15226511","PMID:7765470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to unfolded protein","termid":"GO:0006986"},{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of unfolded protein","termid":"GO:0002235"}


id: GO:0047916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-6-deoxy-D-talose + NAD(P)+ = GDP-4-dehydro-6-deoxy-D-talose + NAD(P)H + H+.","definition_xrefs":["MetaCyc:GDP-6-DEOXY-D-TALOSE-4-DEHYDROGENASE-RXN","EC:1.1.1.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"GDP-6-deoxy-D-talose 4-dehydrogenase activity","synonyms":[{"name":"GDP-6-deoxy-D-talose:NAD(P)+ 4-oxidoreductase activity","type":"related"},{"name":"guanosine diphospho-6-deoxy-D-talose dehydrogenase activity","type":"related"}],"termid":"GO:0047916"}


id: PATO:0001336
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual whose sex is unknown.","definition_xrefs":["MGED:MGED"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001336 unknown sex (obsolete PATO:0001336)","termid":"PATO:0001336"}


id: GO:0048812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a neuron projection are generated and organized. A neuron projection is any process extending from a neural cell, such as axons or dendrites.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"},{"relation_name":"part_of","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection morphogenesis","synonyms":[{"name":"neurite biosynthesis","type":"narrow"},{"name":"neurite formation","type":"narrow"},{"name":"neurite growth","type":"narrow"},{"name":"neurite morphogenesis","type":"related"}],"termid":"GO:0048812"}


id: MONDO:0013714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of lectin complement activation pathway","termid":"MONDO:0044209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"mannose-binding lectin deficiency","secondary_identifiers":["MEDGEN:482216","UMLS:C3280586","SCTID:703538003","MESH:C563602","ICD9:279.19","OMIM:614372"],"synonyms":[{"name":"MBL deficiency","type":"related"},{"name":"MBL2 deficiency","type":"related"},{"name":"MBLD","type":"related"},{"name":"MBP deficiency","type":"related"},{"name":"lectin complement activation pathway, defect in, 1","type":"related"},{"name":"mannose-binding lectin deficiency","type":"exact"},{"name":"mannose-binding protein deficiency","type":"exact"}],"termid":"MONDO:0013714","xrefs":{"Monarch":{"xref_id":"0013714"}}}


id: GO:0009560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized embryo sac nucleus cellularizes and acquires the specialized features of an egg cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_plant","GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac egg cell differentiation","secondary_identifiers":["GO:0048233"],"synonyms":[{"name":"female gamete generation","type":"broad"},{"name":"female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0009560"}


id: GO:0022602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the sexual cycle seen in females, often with physiologic changes in the endometrium that recur at regular intervals during the reproductive years.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"rhythmic process","termid":"GO:0048511"},{"relation_name":"part_of","term_name":"ovulation cycle","termid":"GO:0042698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation cycle process","synonyms":[{"name":"estrous cycle process","type":"related"},{"name":"menstrual cycle process","type":"related"}],"termid":"GO:0022602"}


id: MONDO:0015621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare abdominal surgical disease (obsolete MONDO:0015621)","secondary_identifiers":["Orphanet:165711"],"termid":"MONDO:0015621","xrefs":{"Monarch":{"xref_id":"0015621"}}}


id: GO:0016189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a synaptic vesicle with an endosome.","definition_xrefs":["GOC:curators","PMID:10099709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome organization","termid":"GO:0007032"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"},{"relation_name":"part_of","term_name":"synaptic vesicle endosomal processing","termid":"GO:0099532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"synaptic vesicle to endosome fusion","termid":"GO:0016189"}


id: FYPO:0007670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is normal length, and has one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah","PMID:9862966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001312","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000004","FYPO:0000631","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment and normal cell length","synonyms":[{"name":"inviable mononucleate monoseptate cell with anucleate compartment and normal cell length during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with normal cell length","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"inviable with septation in the absence of nuclear division; normal cell length","type":"related"},{"name":"inviable with septation independent of mitosis, normal cell length","type":"related"},{"name":"inviable with septation without nuclear division; normal cell length","type":"related"},{"name":"lethal; mononucleate monoseptate vegetative cell with normal cell length","type":"exact"}],"termid":"FYPO:0007670"}


id: GO:0102375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-oxo-beta-amyrin + 3 NADPH + 3 O2 + 2 H+ = glycyrrhetinic acid + 3 NADP + 4 H2O.","definition_xrefs":["RHEA:35499","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"11-oxo-beta-amyrin 30-oxidase activity","secondary_identifiers":["MetaCyc:RXN-13506","EC:1.14.14.115"],"termid":"GO:0102375"}


id: PBO:0089327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap95","termid":"PBO:0089327"}


id: GO:0047388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [glutamine synthetase]-O(4)-(5'-adenylyl)-L-tyrosine + phosphate = [glutamine synthetase]-L-tyrosine + ADP.","definition_xrefs":["RHEA:43716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase activity","secondary_identifiers":["MetaCyc:GSDEADENYLATION-RXN","EC:2.7.7.89","KEGG_REACTION:R03474"],"synonyms":[{"name":"[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase","type":"related"},{"name":"adenylyl(glutamine synthetase) hydrolase activity","type":"exact"},{"name":"adenylyl-L-glutamate:ammonia ligase (ADP-forming) adenylylhydrolase activity","type":"exact"},{"name":"adenylyl-[glutamate-ammonia ligase] hydrolase activity","type":"exact"},{"name":"adenylyl-glutamate-ammonia ligase hydrolase activity","type":"exact"},{"name":"adenylyl-glutamine-synthetasehydrolase activity","type":"exact"}],"termid":"GO:0047388"}


id: GO:0043773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) GTP + F420-0 + L-glutamate = GDP + phosphate + F420-1, and (2) GTP + F420-1 + L-glutamate = GDP + phosphate + gamma-F420-2. This is the GTP-dependent successive addition of two L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form F420-0-glutamyl-glutamate (F420-2), with a gamma-linkage between the two glutamates.","definition_xrefs":["PMID:17669425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"coenzyme F420-0 gamma-glutamyl ligase activity","synonyms":[{"name":"F420-0 gamma-glutamyl ligase activity","type":"exact"}],"termid":"GO:0043773"}


id: MONDO:0100336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that result from the presence and activity of a microbial, viral, fungal or parasitic agent, or a disorder that follows infection with an infectious agent but is distinct from the usual manifestations of the infection itself.","gene_count":0,"genotype_count":0,"name":"obsolete infectious disease or post-infectious disorder (obsolete MONDO:0100336)","synonyms":[{"name":"infectious disease or sequela","type":"exact"}],"termid":"MONDO:0100336","xrefs":{"Monarch":{"xref_id":"0100336"}}}


id: GO:0007483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the genital disc are generated and organized. This includes the transformation of a genital imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into the recognizable adult genital structures, the anal plates and the hind gut.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc morphogenesis","synonyms":[{"name":"genital disc metamorphosis","type":"exact"}],"termid":"GO:0007483"}


id: MONDO:0004782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by excretion of large amounts of urine, accompanied by excessive thirst. Causes include deficiency of antidiuretic hormone or failure of the kidneys to respond to antidiuretic hormone. It may also be drug-related.","definition_xrefs":["NCIT:C43263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"diabetes insipidus","secondary_identifiers":["ICD9:253.5","SCTID:15771004","UMLS:C0011848","MEDGEN:8349","MESH:D003919","NANDO:2100117","DOID:9409","ICD10CM:E23.2"],"termid":"MONDO:0004782","xrefs":{"Monarch":{"xref_id":"0004782"}}}


id: PR:O14003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01671","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.10c","secondary_identifiers":["UniProtKB:O14003"],"synonyms":[{"name":"Spom972h-RFC5","type":"exact"},{"name":"replication factor C3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14003"}


id: SO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Terminal inverted repeat transposon superfamily Merlin elements create 8-9 bp target-site duplications (TSD).","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merlin_TIR_transposon","synonyms":[{"name":"DTE transposon","type":"exact"},{"name":"Merlin TIR transposon","type":"exact"},{"name":"Merlin transposon","type":"exact"}],"termid":"SO:0002281"}


id: GO:0000245
data:
  {"annotated_genes":["SJAG_01301","SJAG_02573","SJAG_00322","SJAG_00058","SJAG_01654","SJAG_00225","SJAG_01870","SJAG_00249","SJAG_02058","SJAG_03469","SJAG_05009","SJAG_00147","SJAG_05231","SJAG_04163","SJAG_00911","SJAG_04214","SJAG_02558","SJAG_02843","SJAG_03983","SJAG_02304","SJAG_02279","SJAG_04911","SJAG_00474","SJAG_01008","SJAG_04538","SJAG_04230","SJAG_02185","SJAG_03214","SJAG_01440","SJAG_00313","SJAG_00498","SJAG_01015","SJAG_03995","SJAG_01214"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71928,72108,73667,75462,75800,78612,93145,101495,105253],"is_not":false,"summary":null,"term":"GO:0000245"},{"annotations":[117572],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[72899,101003],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000389"},{"annotations":[105640,112114,93763,94940,102300,102462,113022,110392,110378,94687,79321,114989,97591,109819,91329,95360],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[118459],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000348"},{"annotations":[73963,77041],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006376"},{"annotations":[112196,113594,106522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903241"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.","definition_xrefs":["PMID:9476892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02058":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02573":null,"SJAG_02843":null,"SJAG_03214":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04230":null,"SJAG_04538":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0065003","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"spliceosomal complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spliceosome assembly","type":"broad"}],"termid":"GO:0000245","terms_by_termid":{"GO:0000245":null,"GO:0000348":null,"GO:0000354":null,"GO:0000389":null,"GO:0000395":null,"GO:0006376":null,"GO:1903241":null}}


id: PBO:0044169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytotoxic T-lymphocyte associated protein 4","termid":"PBO:0044169"}


id: PBO:0045208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC3 divergent transcript","termid":"PBO:0045208"}


id: PBO:0087808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein (TBP); general transcription factor that interacts with other factors to form the preinitiation complex at promoters; essential for viability, highly conserved; yeast gene can complement mutations in human homolog TBP","termid":"PBO:0087808"}


id: PBO:0031710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitophagy","termid":"PBO:0031710"}


id: GO:1990983
data:
  {"annotated_genes":["SJAG_00892"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102850],"is_not":false,"summary":null,"term":"GO:1990983"}]},"cv_name":"biological_process","definition":"A process in which translation initiation is regulated by post-translation modifications of a tRNA molecule.","definition_xrefs":["PMID:27745969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation by tRNA modification","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA demethylation","type":"broad"}],"termid":"GO:1990983","terms_by_termid":{"GO:1990983":null}}


id: PBO:0050755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 17","termid":"PBO:0050755"}


id: PBO:0027489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_during_G0","termid":"PBO:0027489"}


id: FYPO:0004741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of filamentous actin (F-actin) in the actomyosin contractile ring is normal (i.e. indistinguishable from wild type) during mitotic anaphase B.","definition_xrefs":["PMID:25688133","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring","termid":"FYPO:0004740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal F-actin level in actomyosin contractile ring during anaphase B","synonyms":[{"name":"normal F-actin level in actomyosin contractile ring during anaphase B during mitotic cell cycle","type":"related"},{"name":"normal F-actin level in actomyosin contractile ring during anaphase B during vegetative growth","type":"exact"},{"name":"normal F-actin level in contractile ring during anaphase B","type":"exact"},{"name":"normal F-actin level in cytokinetic contractile ring during anaphase B","type":"exact"},{"name":"normal abundance of actin in actomyosin contractile ring in anaphase B","type":"exact"},{"name":"normal actomyosin contractile ring F-actin level during anaphase B","type":"exact"},{"name":"normal filamentous actin level in actomyosin contractile ring during anaphase B","type":"exact"}],"termid":"FYPO:0004741"}


id: MONDO:0850053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F12-associated cold autoinflammatory syndrome","secondary_identifiers":["MEDGEN:1843368","GARD:22454","Orphanet:617919","UMLS:C5681829"],"termid":"MONDO:0850053","xrefs":{"Monarch":{"xref_id":"0850053"}}}


id: PBO:0065228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 9","termid":"PBO:0065228"}


id: PBO:0081389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 229","termid":"PBO:0081389"}


id: GO:0010581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An process which modulate the frequency, rate or extent of starch biosynthesis, the chemical reactions and pathways resulting in the formation of starch.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"regulates","term_name":"starch biosynthetic process","termid":"GO:0019252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of starch biosynthetic process","termid":"GO:0010581"}


id: MONDO:0002766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentaited, non-metastasizing squamous cell carcinoma arising from the larynx. It is an exophytic, warty, and slow growing tumor affecting predominantly older men. It is associated with tobacco smoking. Symptoms include hoarseness, airway obstruction, weight loss, dysphagia, and throat pain. If left untreated, it may cause extensive local destruction.","definition_xrefs":["NCIT:C8188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal squamous cell carcinoma","termid":"MONDO:0005595"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"larynx verrucous carcinoma","secondary_identifiers":["MEDGEN:76097","DOID:3752","SCTID:707427000","UMLS:C0280328"],"synonyms":[{"name":"laryngeal throat verrucous cancer","type":"exact"},{"name":"laryngeal verrucous carcinoma","type":"exact"},{"name":"larynx verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of larynx","type":"exact"},{"name":"verrucous carcinoma of the larynx","type":"exact"}],"termid":"MONDO:0002766","xrefs":{"Monarch":{"xref_id":"0002766"}}}


id: FYPO:0002428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores with elongated germ tubes and vegetative cells of normal size and shape. The vegetative cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores with elongated germ tubes and cells with normal morphology (obsolete FYPO:0002428)","termid":"FYPO:0002428"}


id: MONDO:0033657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 20","secondary_identifiers":["OMIM:619071","UMLS:C5436730","DOID:0112153","MEDGEN:1765130"],"synonyms":[{"name":"HLD20","type":"exact"}],"termid":"MONDO:0033657","xrefs":{"Monarch":{"xref_id":"0033657"}}}


id: MONDO:0970993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 119","secondary_identifiers":["UMLS:C5935621","MEDGEN:1859911","OMIM:620825"],"termid":"MONDO:0970993","xrefs":{"Monarch":{"xref_id":"0970993"}}}


id: FYPO:0006904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type). A mitotic cell size control checkpoint normally prevents cell cycle progression until the cell reaches a certain size.","definition_xrefs":["GO:0031567","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic cell size control checkpoint","synonyms":[{"name":"normal cell size control checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell size control checkpoint activation","type":"exact"},{"name":"normal mitotic cell size control checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006904"}


id: PBO:0077680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 11","termid":"PBO:0077680"}


id: SO:0001471
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an RST sequence.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RST_match","synonyms":[{"name":"RST match","type":"exact"}],"termid":"SO:0001471"}


id: GO:1900869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tatiopterin.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tatiopterin metabolic process","synonyms":[{"name":"tatiopterin metabolism","type":"exact"}],"termid":"GO:1900869"}


id: PBO:0061559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5DC1 pseudogene 2","termid":"PBO:0061559"}


id: PBO:0077202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 4 L six family member 19","termid":"PBO:0077202"}


id: PBO:0018236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid4 (predicted)","termid":"PBO:0018236"}


id: PBO:0030780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_bismuth","termid":"PBO:0030780"}


id: GO:0006958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"},{"relation_name":"part_of","term_name":"humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation, classical pathway","secondary_identifiers":["Reactome:R-HSA-173623"],"synonyms":[{"name":"complement cascade, classical pathway","type":"exact"}],"termid":"GO:0006958"}


id: GO:0042467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell or organism in response to a stimulus in which the speed or frequency of movement is increased or decreased.","definition_xrefs":["GOC:jl","PMID:8207088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesis","termid":"GO:0042465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"orthokinesis","termid":"GO:0042467"}


id: PBO:0076411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 6","termid":"PBO:0076411"}


id: GO:0010166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving wax, a compound containing C16 and C18 fatty acids.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"wax metabolic process","synonyms":[{"name":"wax metabolism","type":"exact"}],"termid":"GO:0010166"}


id: FYPO:0002531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to nucleoplasm","synonyms":[{"name":"abolished protein localisation to nucleoplasm","type":"exact"},{"name":"abolished protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleoplasm during vegetative growth","type":"exact"},{"name":"protein localization to nucleoplasm abolished","type":"exact"}],"termid":"FYPO:0002531"}


id: PBO:0086088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase; has specificity for serine, threonine, and tyrosine residues; has a role in the DNA synthesis phase of the cell cycle","termid":"PBO:0086088"}


id: PBO:0059924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 10","termid":"PBO:0059924"}


id: PBO:0069678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 955, pseudogene","termid":"PBO:0069678"}


id: PBO:0114636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, possibly isoprenylated","termid":"PBO:0114636"}


id: FYPO:0002973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin ligase activity is increased during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ubiquitin ligase activity","termid":"FYPO:0002972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"increased ubiquitin ligase activity during mitotic metaphase","synonyms":[{"name":"increased ubiquitin ligase activity during metaphase of mitosis","type":"exact"},{"name":"increased ubiquitin-protein ligase activity during mitotic metaphase","type":"exact"}],"termid":"FYPO:0002973"}


