# terms

id: MONDO:0017745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of O-mannosylglycan synthesis (obsolete MONDO:0017745)","secondary_identifiers":["Orphanet:309469"],"termid":"MONDO:0017745","xrefs":{"Monarch":{"xref_id":"0017745"}}}


id: MONDO:0016881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 19 disorder","termid":"MONDO:0700024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 19","secondary_identifiers":["UMLS:C5679663","Orphanet:261841","MEDGEN:1825965","GARD:20804"],"synonyms":[{"name":"partial deletion of chromosome type 19","type":"exact"},{"name":"partial monosomy of chromosome 19","type":"exact"}],"termid":"MONDO:0016881","xrefs":{"Monarch":{"xref_id":"0016881"}}}


id: GO:0047482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine.","definition_xrefs":["RHEA:17969","EC:6.3.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase activity","secondary_identifiers":["KEGG_REACTION:R02786","MetaCyc:6.3.2.7-RXN"],"synonyms":[{"name":"L-lysine-adding enzyme activity","type":"related"},{"name":"MurE synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:L-lysine gamma-ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine synthetase activity","type":"related"},{"name":"UPD-MurNAc-L-Ala-D-Glu:L-Lys ligase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanyl-D-glutamyllysine synthetase activity","type":"related"}],"termid":"GO:0047482"}


id: GO:0035191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise asymmetric spreading out of nuclei internally along the anterior-posterior axis of the developing insect embryo during mitotic cycles 4 to 6. This movement leads to the distribution of nuclei in a hollow ellipsoid underlying the cortex.","definition_xrefs":["PMID:8314839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytial nuclear migration","termid":"GO:0035190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nuclear axial expansion","synonyms":[{"name":"nuclear distribution along anterior-posterior axis","type":"exact"},{"name":"nucleus distribution along anterior-posterior axis","type":"exact"}],"termid":"GO:0035191"}


id: GO:0103088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-8-methylthiooctanoate + acetyl-CoA + H2O = H+ + 2-(6'-methylthio)hexylmalate + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-(6'-methylthio)hexylmalate synthase activity (obsolete GO:0103088)","termid":"GO:0103088"}


id: GO:0048691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of axon extension involved in regeneration.","definition_xrefs":["GOC:lm","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon extension","termid":"GO:0045773"},{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of axon extension involved in regeneration","termid":"GO:0048690"},{"relation_name":"positively_regulates","term_name":"axon extension involved in regeneration","termid":"GO:0048677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon extension involved in regeneration","synonyms":[{"name":"activation of axon extension involved in regeneration","type":"narrow"},{"name":"stimulation of axon extension involved in regeneration","type":"narrow"},{"name":"up regulation of axon extension involved in regeneration","type":"exact"},{"name":"up-regulation of axon extension involved in regeneration","type":"exact"},{"name":"upregulation of axon extension involved in regeneration","type":"exact"}],"termid":"GO:0048691"}


id: PBO:0116638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF guanine nucleotide exchange factor 1","termid":"PBO:0116638"}


id: MONDO:0019838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disease of the pituitary gland which can present with varying degrees of pituitary hormonal impairment and/or with symptoms related to pituitary enlargement. It predominantly affects young women in pregnancy or the peripartum period.","definition_xrefs":["PMID:21592417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypophysitis","termid":"MONDO:0019835"},{"relation_name":"is_a","term_name":"anterior pituitary gland disorder","termid":"MONDO:0024468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"adenohypophysitis","secondary_identifiers":["Orphanet:95512","GARD:19284","MEDGEN:1677203","UMLS:C5190880"],"synonyms":[{"name":"adenohypophysis inflammation","type":"exact"},{"name":"anterior pituitary hypophysitis","type":"exact"},{"name":"inflammation of adenohypophysis","type":"exact"},{"name":"lymphocytic adenohypophysitis","type":"exact"}],"termid":"MONDO:0019838","xrefs":{"Monarch":{"xref_id":"0019838"}}}


id: FYPO:0008280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of myo-inositol measured in a cell is lower than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular myo-inositol level","termid":"FYPO:0008280"}


id: PBO:0079427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 10","termid":"PBO:0079427"}


id: GO:0036284
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Actin-based structures involved in establishing close contact between Sertoli-Sertoli cells or Sertoli-spermatids in the seminiferous tubules of the testes.","definition_xrefs":["PMID:22510523","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tubulobulbar complex","synonyms":[{"name":"TBC","type":"exact"}],"termid":"GO:0036284"}


id: PBO:0086641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YNL146W is not an essential gene","termid":"PBO:0086641"}


id: PBO:0034496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_centromere_during_vegetative_growth","termid":"PBO:0034496"}


id: MONDO:0018020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mercury poisoning is caused mainly through ingestion or inhalation of any of the 3 forms of mercury, elemental, organic, and inorganic. Exposure to elemental mercury affects the pulmonary (inhalation of mercury vapors causes coughing, chills, fever, shortness of breath), dermatological (mild swelling, vesiculation, scaling, irritation, urticaria, erythema and allergic contact dermatitis accompanied by pain), and peripheral and central nervous (CNS) systems (depression, paranoia, extreme irritability, hallucinations, inability to concentrate, memory loss, hands, head, lips, tongue, jaw and eyelids tremors, weight loss, perpetually low body temperature, drowsiness, headaches, insomnia, fatigue). Exposure to inorganic mercury generally causes development of a metallic taste, local oropharyngeal pain, nausea, vomiting, bloody diarrhea, colic abdominal pain, renal dysfunction and, neurologic abnormalities; while that to organic mercury can lead to delayed neurotoxicity.","definition_xrefs":["Orphanet:330021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury poisoning","secondary_identifiers":["GARD:7021","MESH:D008630","SCTID:85180002","ICD9:985.0","EFO:1001810"],"synonyms":[{"name":"Mercury intoxication","type":"exact"},{"name":"Mercury toxicity","type":"related"},{"name":"hydrargyria","type":"exact"},{"name":"mercurialism","type":"exact"}],"termid":"MONDO:0018020","xrefs":{"Monarch":{"xref_id":"0018020"}}}


id: GO:0043619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to oxidative stress (obsolete GO:0043619)","termid":"GO:0043619"}


id: MONDO:0020710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the amnion.","definition_xrefs":["NCIT:C50459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"disorder of extraembryonic membrane","termid":"MONDO:0045013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amnionitis","secondary_identifiers":["SCTID:10573002","ICD9:658.40","UMLS:C0002631","MEDGEN:1490"],"synonyms":[{"name":"Infection of amniotic cavity","type":"related"},{"name":"amnionitides","type":"related"},{"name":"amnionitis","type":"exact"},{"name":"amniotic cavity infection","type":"related"},{"name":"amniotic infection syndrome","type":"narrow"},{"name":"infection of amniotic cavity","type":"exact"}],"termid":"MONDO:0020710","xrefs":{"Monarch":{"xref_id":"0020710"}}}


id: GO:1902257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:16839542","GOC:mtg_apoptosis","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in outflow tract morphogenesis","termid":"GO:1902256"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in morphogenesis","termid":"GO:1902338"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in outflow tract morphogenesis","termid":"GO:0003275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"down regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"down regulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"down-regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"down-regulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"downregulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"downregulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"inhibition of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"inhibition of apoptotic process involved in outflow tract morphogenesis","type":"narrow"},{"name":"negative regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:1902257"}


id: GO:0015361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:2.A.47.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"low-affinity sodium:dicarboxylate symporter activity","secondary_identifiers":["Reactome:R-HSA-433131"],"synonyms":[{"name":"low affinity sodium:dicarboxylate cotransporter activity","type":"broad"},{"name":"low affinity sodium:dicarboxylate symporter activity","type":"exact"}],"termid":"GO:0015361"}


id: GO:0004746
data:
  {"annotated_genes":["SJAG_02360","SJAG_02491"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76270,110132],"is_not":false,"summary":null,"term":"GO:0004746"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 6,7-dimethyl-8-(1-D-ribityl)lumazine + H+ = 5-amino-6-(D-ribitylamino)uracil + riboflavin.","definition_xrefs":["EC:2.5.1.9","RHEA:20772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02360":null,"SJAG_02491":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"riboflavin synthase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00066","MetaCyc:RIBOFLAVIN-SYN-RXN"],"synonyms":[{"name":"6,7-dimethyl-8-(1-D-ribityl)lumazine:6,7-dimethyl-8-(1-D-ribityl)lumazine 2,3-butanediyltransferase activity","type":"related"},{"name":"heavy riboflavin synthase","type":"narrow"},{"name":"light riboflavin synthase","type":"narrow"},{"name":"riboflavin synthetase activity","type":"related"},{"name":"riboflavine synthase activity","type":"related"},{"name":"riboflavine synthetase activity","type":"related"},{"name":"vitamin B2 synthase activity","type":"exact"}],"termid":"GO:0004746","terms_by_termid":{"GO:0004746":null}}


id: MONDO:0008987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cirrhosis, familial (obsolete MONDO:0008987)","termid":"MONDO:0008987","xrefs":{"Monarch":{"xref_id":"0008987"}}}


id: GO:1903471
data:
  {"annotated_genes":["SJAG_04597","SJAG_00845","SJAG_04776","SJAG_03581","SJAG_03936","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[94340,87297,110273,113108,94172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring contraction.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:1234","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actomyosin contractile ring contraction","termid":"GO:0031991"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"regulates","term_name":"mitotic actomyosin contractile ring contraction","termid":"GO:1902404"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03936":null,"SJAG_04597":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"regulation of mitotic actomyosin contractile ring constriction","type":"exact"}],"termid":"GO:1903471","terms_by_termid":{"GO:1903472":null,"GO:1903473":null}}


id: GO:0044593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of iron-sulfur-molybdenum cofactor, the cofactor located at the active site of the molybdenum nitrogenase.","definition_xrefs":["PMID:18429691","GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0016226"],"is_obsolete":false,"name":"iron-sulfur-molybdenum cofactor assembly","synonyms":[{"name":"FeMoco assembly","type":"exact"},{"name":"FeMoco biosynthetic process","type":"exact"},{"name":"iron molybdenum cofactor assembly","type":"exact"},{"name":"iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"iron molybdenum cofactor biosynthetic process","type":"exact"}],"termid":"GO:0044593"}


id: GO:0071475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic salinity response","termid":"GO:0042538"},{"relation_name":"is_a","term_name":"cellular response to salt stress","termid":"GO:0071472"},{"relation_name":"is_a","term_name":"cellular hyperosmotic response","termid":"GO:0071474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hyperosmotic salinity response","synonyms":[{"name":"cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:0071475"}


id: MONDO:0016649
data:
  {"annotated_genes":["SJAG_04938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014296"}]},"cv_name":"mondo","definition":"Micro syndrome is an autosomal recessive disorder caracterised by ocular and neurodevelopmental defects and by microgenitalia. It presents with severe intellectual disability, microcephaly, congenital cataract, microcornea, microphthalmia, agenesis/hypoplasia of the corpus callosum, and hypogenitalism.","definition_xrefs":["Orphanet:2510"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"},{"relation_name":"is_a","term_name":"RAB18 deficiency","termid":"MONDO:0700247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04938":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Warburg micro syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1898","DOID:0060237","GARD:5534","MEDGEN:1781286","OMIMPS:600118","UMLS:C5442005"],"synonyms":[{"name":"WARBM","type":"exact"},{"name":"Warburg micro syndrome","type":"exact"},{"name":"Warburg-Sjo-Fledelius syndrome","type":"exact"},{"name":"micro syndrome","type":"exact"},{"name":"microcephaly, microcornea, congenital cataract, intellectual disability, optic atrophy and hypogenitalism","type":"related"},{"name":"microcephaly, microcornea, congenital cataract, mental retardation, optic atrophy and hypogenitalism","type":"related"}],"termid":"MONDO:0016649","terms_by_termid":{"MONDO:0014296":null},"xrefs":{"Monarch":{"xref_id":"0016649"}}}


id: MONDO:0014928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the MKS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with ocular defect","termid":"MONDO:0016364"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0020022","MONDO:0006025"],"is_obsolete":false,"name":"Joubert syndrome 28","secondary_identifiers":["UMLS:C4310705","OMIM:617121","DOID:0110997","GARD:16195","MEDGEN:934672"],"synonyms":[{"name":"JBTS28","type":"exact"},{"name":"Joubert syndrome 28","type":"exact"},{"name":"Joubert syndrome caused by mutation in MKS1","type":"exact"},{"name":"Joubert syndrome type 28","type":"exact"},{"name":"MKS1 Joubert syndrome","type":"exact"}],"termid":"MONDO:0014928","xrefs":{"Monarch":{"xref_id":"0014928"}}}


id: MONDO:0012486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preauricular tag, isolated, autosomal dominant, 1","secondary_identifiers":["UMLS:C1968893","MESH:C566904","MEDGEN:369878","OMIM:610420"],"synonyms":[{"name":"preauricular Tag, isolated, autosomal dominant, type 1","type":"exact"},{"name":"preauricular tag, isolated, autosomal dominant, 1","type":"exact"}],"termid":"MONDO:0012486","xrefs":{"Monarch":{"xref_id":"0012486"}}}


id: MONDO:0007853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma-hereditary motor and sensory neuropathy syndrome","secondary_identifiers":["UMLS:C1835671","MESH:C536153","OMIM:148360","GARD:17977","MEDGEN:322722","Orphanet:538574"],"synonyms":[{"name":"Charcot-Marie-Tooth disease with palmoplantar keratoderma and nail dystrophy","type":"related"},{"name":"axonal neuropathy with palmoplantar keratoderma","type":"related"},{"name":"keratoderma, palmoplantar, with nail dystrophy and hereditary motor-sensory neuropathy","type":"exact"}],"termid":"MONDO:0007853","xrefs":{"Monarch":{"xref_id":"0007853"}}}


id: PBO:0045836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 26","termid":"PBO:0045836"}


id: PBO:0080794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-prolyl aminopeptidase 1","termid":"PBO:0080794"}


id: SO:0001571
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby a new splice site is created due to the activation of a new donor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptic_splice_site_variant","termid":"SO:0001569"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_donor","synonyms":[{"name":"cryptic splice donor","type":"exact"}],"termid":"SO:0001571"}


id: PBO:0063053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presequence translocase associated motor 16","termid":"PBO:0063053"}


id: PR:O13836
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- din1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping nuclease din1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.06c","synonyms":[{"name":"Spom972h-din1","type":"exact"},{"name":"dhp1-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13836"}


id: GO:0009134
data:
  {"annotated_genes":["SJAG_03977","SJAG_01595","SJAG_06622","SJAG_00027","SJAG_00461","SJAG_02945","SJAG_02009","SJAG_04048","SJAG_03903","SJAG_06621","SJAG_05314","SJAG_02785","SJAG_04192","SJAG_03676","SJAG_01310","SJAG_00685","SJAG_02135","SJAG_03373","SJAG_02796","SJAG_04334","SJAG_00605","SJAG_03660","SJAG_02107","SJAG_00839","SJAG_03828","SJAG_04495","SJAG_02369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70303],"is_not":false,"summary":null,"term":"GO:0009134"},{"annotations":[105587,105217,109145,109147,98022,77638,105588,103136,103393,109142,97749,94773,109146,109141,105218,105219,109143,116092,94284,109144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[72857,75818],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[69868],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[113058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009191"},{"annotations":[76058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01595":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside diphosphate breakdown","type":"exact"},{"name":"nucleoside diphosphate catabolism","type":"exact"},{"name":"nucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009134","terms_by_termid":{"GO:0006110":null,"GO:0006256":null,"GO:0009134":null,"GO:0009191":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: PBO:0084427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major orotate phosphoribosyltransferase (OPRTase) isozyme; catalyzes the fifth enzymatic step in de novo biosynthesis of pyrimidines, converting orotate into orotidine-5'-phosphate; URA5 has a paralog, URA10, that arose from the whole genome duplication","termid":"PBO:0084427"}


id: PBO:0066605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T2","termid":"PBO:0066605"}


id: GO:1905893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cellular response to thapsigargin.","definition_xrefs":["GOC:bc","GO_REF:0000058","GOC:aruk","GOC:TermGenie","PMID:21803450"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular response to thapsigargin (obsolete GO:1905893)","synonyms":[{"name":"activation of cellular response to thapsigargin","type":"narrow"},{"name":"up regulation of cellular response to thapsigargin","type":"exact"},{"name":"up-regulation of cellular response to thapsigargin","type":"exact"},{"name":"upregulation of cellular response to thapsigargin","type":"exact"}],"termid":"GO:1905893"}


id: GO:0036223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of adenine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to adenine starvation","synonyms":[{"name":"cellular response to adenine deprivation","type":"exact"}],"termid":"GO:0036223"}


id: MOD:00592
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15732931","PubMed:16046801","Unimod:272","PubMed:12705581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonation of N-terminal","synonyms":[{"name":"CAF","type":"related"},{"name":"sulfonation of N-terminus","type":"related"}],"termid":"MOD:00592"}


id: PBO:0079450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor 2, mitochondrial calcium regulator","termid":"PBO:0079450"}


id: PBO:0031705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_necrotic_cell_death_(obsolete_FYPO:0000505)","termid":"PBO:0031705"}


id: FYPO:0003195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to phosphate starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"altered RNA level during cellular response to phosphate starvation","synonyms":[{"name":"abnormal RNA level during cellular response to phosphate starvation","type":"exact"},{"name":"altered RNA level during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during phosphate starvation","type":"exact"},{"name":"altered cellular RNA level during cellular response to phosphate starvation","type":"exact"},{"name":"altered transcript level during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0003195"}


id: FYPO:0006942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of lipid binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal lipid binding","termid":"FYPO:0006942"}


id: MONDO:1011617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Waardenburg syndrome that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, non-human animal","termid":"MONDO:1011447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, domestic cat","secondary_identifiers":["OMIA:001059-9685"],"termid":"MONDO:1011617","xrefs":{"Monarch":{"xref_id":"1011617"}}}


id: GO:0042925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"benzoate transmembrane transporter activity","synonyms":[{"name":"benzoate transporter activity","type":"related"}],"termid":"GO:0042925"}


id: MOD:00521
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:153","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex2HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(2)HexNAc(2)","type":"related"},{"name":"Hex2HexNAc2","type":"related"}],"termid":"MOD:00521"}


id: PBO:0028264
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_pheromone","termid":"PBO:0028264"}


id: GO:1905619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-(1->3)-fucosyltransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:15364955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-(1->3)-fucosyltransferase activity","synonyms":[{"name":"regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"regulation of alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:1905619"}


id: PBO:0079708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 2","termid":"PBO:0079708"}


id: PATO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000350 electrolyte composition value (obsolete PATO:0000350)","termid":"PATO:0000350"}


id: PBO:0108959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_deletion_and_mutation","termid":"PBO:0108959"}


id: MONDO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histidinemia (obsolete MONDO:0000695)","termid":"MONDO:0000695","xrefs":{"Monarch":{"xref_id":"0000695"}}}


id: PBO:0062600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily K member 1","termid":"PBO:0062600"}


id: GO:1904627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phorbol 13-acetate 12-myristate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:2200903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phorbol 13-acetate 12-myristate","synonyms":[{"name":"response to PMA","type":"exact"},{"name":"response to TPA","type":"exact"},{"name":"response to phorbol 12-tetradecanoate 13-acetate","type":"exact"},{"name":"response to tetradecanoylphorbol acetate","type":"exact"}],"termid":"GO:1904627"}


id: PBO:0051419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-18","termid":"PBO:0051419"}


id: FYPO:0001131
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin","termid":"FYPO:0004718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abnormal protein localization to heterochromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to heterochromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001131","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: GO:1901876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion binding.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:16432188","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion binding","synonyms":[{"name":"regulation of calcium ion storage activity","type":"related"}],"termid":"GO:1901876"}


id: PBO:0027574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027574"}


id: MONDO:0958347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dysraphic abnormality characterized by the infiltration of fatty tissue localized in the filum terminale, thickens and loses its flexibility, with normal conus shape, regardless of conus level. There is no other spinal cord malformation associated, but it can be associated with extraspinal malformation (ex: anorectal malformation) or syndromic situation.","definition_xrefs":["Orphanet:645325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphic spinal cord lipoma","termid":"MONDO:0958260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated filum lipoma","secondary_identifiers":["UMLS:C5816720","MEDGEN:1853135"],"termid":"MONDO:0958347","xrefs":{"Monarch":{"xref_id":"0958347"}}}


id: PBO:0050161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 17","termid":"PBO:0050161"}


id: SO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A partially_duplicated_transcript where the 5' end of the transcript is duplicated.","direct_ancestors":[{"relation_name":"is_a","term_name":"partially_duplicated_transcript","termid":"SO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_duplicated_transcript","synonyms":[{"name":"5' duplicated transcript","type":"exact"},{"name":"five prime duplicated transcript","type":"exact"},{"name":"five prime partially duplicated transcript","type":"exact"}],"termid":"SO:0002245"}


id: GO:0060839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to an endothelial cell fate and its capacity to differentiate into an endothelial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell fate commitment","termid":"GO:0060839"}


id: GO:0047608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylindoxyl + O2 = N-acetylisatin + unknown.","definition_xrefs":["EC:1.7.3.2","MetaCyc:ACETYLINDOXYL-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetylindoxyl oxidase activity","secondary_identifiers":["RHEA:16941"],"synonyms":[{"name":"N-acetylindoxyl:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047608"}


id: PBO:0047731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 like","termid":"PBO:0047731"}


id: MONDO:0035162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete PIK3CA-related overgrowth syndrome (obsolete MONDO:0035162)","secondary_identifiers":["Orphanet:530313"],"synonyms":[{"name":"PIK3CA-Related Overgrowth Spectrum","type":"exact"},{"name":"PROS","type":"exact"}],"termid":"MONDO:0035162","xrefs":{"Monarch":{"xref_id":"0035162"}}}


id: GO:0007406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the proliferation of neuroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"is_a","term_name":"regulation of neuroblast proliferation","termid":"GO:1902692"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuroblast proliferation","synonyms":[{"name":"down regulation of neuroblast proliferation","type":"exact"},{"name":"down-regulation of neuroblast proliferation","type":"exact"},{"name":"downregulation of neuroblast proliferation","type":"exact"},{"name":"inhibition of neuroblast proliferation","type":"narrow"},{"name":"suppression of neuroblast proliferation","type":"exact"}],"termid":"GO:0007406"}


id: PBO:0076787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-2,3-enoyl-CoA reductase pseudogene 1","termid":"PBO:0076787"}


id: PBO:0061307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide FF receptor 1","termid":"PBO:0061307"}


id: GO:1901287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of iron-sulfur-molybdenum cofactor.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"iron-sulfur-molybdenum cofactor metabolic process","termid":"GO:1901286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iron-sulfur-molybdenum cofactor catabolic process","synonyms":[{"name":"FeMo-co breakdown","type":"exact"},{"name":"FeMo-co catabolic process","type":"exact"},{"name":"FeMo-co catabolism","type":"exact"},{"name":"FeMo-co degradation","type":"exact"},{"name":"iron-molybdenum breakdown","type":"exact"},{"name":"iron-molybdenum catabolic process","type":"exact"},{"name":"iron-molybdenum catabolism","type":"exact"},{"name":"iron-molybdenum degradation","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor breakdown","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor catabolism","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor degradation","type":"exact"}],"termid":"GO:1901287"}


id: PBO:0003661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA/EH/EF hand domain protein Ucp8","termid":"PBO:0003661"}


id: PBO:0070300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 6","termid":"PBO:0070300"}


id: MONDO:1012164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"micromelia, non-human animal","termid":"MONDO:1011765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micromelia, chicken","secondary_identifiers":["OMIA:000648-9031"],"termid":"MONDO:1012164","xrefs":{"Monarch":{"xref_id":"1012164"}}}


id: FYPO:0001978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is not straight, but instead forms an angle where microtubules from opposite poles interdigitate.","definition_xrefs":["PMID:1538784","PMID:2145514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0000120","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"bent mitotic spindle","synonyms":[{"name":"V-shaped bipolar mitotic spindle","type":"exact"},{"name":"bent bipolar mitotic spindle","type":"exact"},{"name":"bent mitotic spindle during vegetative growth","type":"exact"},{"name":"bent spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001978"}


id: MONDO:0018010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"juvenile idiopathic inflammatory myopathy","secondary_identifiers":["MEDGEN:1842624","GARD:21496","UMLS:C5679857","Orphanet:329888"],"synonyms":[{"name":"JIIM","type":"exact"}],"termid":"MONDO:0018010","xrefs":{"Monarch":{"xref_id":"0018010"}}}


id: GO:0047516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propane-1,3-diol + NAD+ = 3-hydroxypropanal + NADH + H+.","definition_xrefs":["MetaCyc:13-PROPANEDIOL-DEHYDROGENASE-RXN","EC:1.1.1.202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1,3-propanediol dehydrogenase activity","secondary_identifiers":["RHEA:23188"],"synonyms":[{"name":"1,3-PD:NAD+ oxidoreductase activity","type":"related"},{"name":"1,3-propanediol oxidoreductase activity","type":"related"},{"name":"1,3-propanediol:NAD+ oxidoreductase activity","type":"related"},{"name":"3-hydroxypropionaldehyde reductase activity","type":"related"},{"name":"propane-1,3-diol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047516"}


id: MONDO:0009708
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84820,84821],"is_not":false,"summary":null,"term":"MONDO:0009708"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hyaline body myopathy","termid":"MONDO:0018889"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, myosin storage, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:636970","OMIM:255160","GARD:15207","DOID:0111268","MESH:C564970","UMLS:C1850709","MEDGEN:340603"],"synonyms":[{"name":"MSMB","type":"related"},{"name":"autosomal recessive myosin storage myopathy","type":"exact"},{"name":"myopathy, hyaline body, autosomal recessive","type":"related"},{"name":"myopathy, myosin storage, autosomal recessive","type":"exact"}],"termid":"MONDO:0009708","terms_by_termid":{"MONDO:0009708":null},"xrefs":{"Monarch":{"xref_id":"0009708"}}}


id: GO:0009037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of new phosphodiester bonds between a pair of short, unique DNA target sequences; occurs through a phosphotyrosyl intermediate in which the target sequence is first cleaved by the nucleophilic attack by a tyrosine in the active site.","definition_xrefs":["GOC:elh","PMID:11090626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific recombinase activity","termid":"GO:0009009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tyrosine-based site-specific recombinase activity","synonyms":[{"name":"site-specific tyrosine recombinase activity","type":"exact"},{"name":"tyrosine recombinase","type":"broad"}],"termid":"GO:0009037"}


id: PBO:0076059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STON1-GTF2A1L readthrough","termid":"PBO:0076059"}


id: MONDO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete crater-like holes of optic disk (obsolete MONDO:0001679)","secondary_identifiers":["DOID:13295","ICD9:377.22"],"synonyms":[{"name":"crater-like optic disk holes","type":"exact"}],"termid":"MONDO:0001679","xrefs":{"Monarch":{"xref_id":"0001679"}}}


id: PBO:0051853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 6","termid":"PBO:0051853"}


id: PBO:0054306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1698","termid":"PBO:0054306"}


id: PBO:0080457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2B","termid":"PBO:0080457"}


id: PBO:0057376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ar","termid":"PBO:0057376"}


id: PBO:0034644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_upon_nitrogen_starvation","termid":"PBO:0034644"}


id: GO:0061054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"somite development","termid":"GO:0061053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermatome development","termid":"GO:0061054"}


id: PBO:0083602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; identified by homology","termid":"PBO:0083602"}


id: GO:0042565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex which usually consists of three components, e.g. in Xenopus and yeast, the export receptor CRM1 (also known as exportin 1), the Ran protein and any RNA with a nuclear export sequence (NES). The complex acts to export RNA molecules with a NES from the nucleus through a nuclear pore.","definition_xrefs":["GOC:jl","PMID:9323123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport complex","termid":"GO:0031074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA nuclear export complex","termid":"GO:0042565"}


id: GO:0051952
data:
  {"annotated_genes":["SJAG_00991","SJAG_03970","SJAG_05346","SJAG_03591","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[110289,91505,93099,98637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[91506,93100,98638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[93101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"amine transport","termid":"GO:0015837"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of amine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051952","terms_by_termid":{"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: MONDO:0003220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the gall bladder","direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder cancer","termid":"MONDO:0005411"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"gallbladder carcinoma","secondary_identifiers":["EFO:1001956","NCIT:C3844","SCTID:372140005","UMLS:C0235782","MEDGEN:116001","DOID:4948"],"synonyms":[{"name":"Gall bladder carcinoma (adeno)","type":"exact"},{"name":"Gall bladder carcinoma (adenocarcinoma)","type":"exact"},{"name":"cancer of gallbladder","type":"exact"},{"name":"cancer of the gallbladder","type":"exact"},{"name":"carcinoma gallbladder","type":"exact"},{"name":"carcinoma of gall bladder","type":"exact"},{"name":"carcinoma of gallbladder","type":"exact"},{"name":"carcinoma of the gallbladder","type":"exact"},{"name":"gall bladder carcinoma","type":"exact"},{"name":"gallbladder cancer","type":"broad"},{"name":"gallbladder carcinoma","type":"exact"}],"termid":"MONDO:0003220","xrefs":{"Monarch":{"xref_id":"0003220"}}}


id: GO:0048813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendrite are generated and organized.","definition_xrefs":["GOC:aruk","GOC:bc","GOC:jl","ISBN:0198506732","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"dendrite development","termid":"GO:0016358"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite morphogenesis","termid":"GO:0048813"}


id: PBO:0057351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 545","termid":"PBO:0057351"}


id: MONDO:0006640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excess production of adrenal cortex hormones.","definition_xrefs":["MESH:D000308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal cortex disorder","termid":"MONDO:0002816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal gland hyperfunction","secondary_identifiers":["ICD9:255.3","SCTID:275437005","DOID:3947","UMLS:C0001622","EFO:1000797","HP:0003118","MEDGEN:7899"],"synonyms":[{"name":"adrenal gland hyperfunction","type":"exact"},{"name":"adrenocortical hyperfunction","type":"exact"},{"name":"disorder of corticoadrenal overactivity","type":"related"},{"name":"hyperadrenalism","type":"exact"},{"name":"hyperadrenocorticism","type":"related"},{"name":"hypercorticism","type":"related"},{"name":"hypercortisolemia","type":"exact"},{"name":"hypercortisolism","type":"exact"},{"name":"hyperfunction, adrenal gland","type":"related"},{"name":"hyperfunction, adrenocortical","type":"related"}],"termid":"MONDO:0006640","xrefs":{"Monarch":{"xref_id":"0006640"}}}


id: PBO:0027195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_lateral_cell_cortex","termid":"PBO:0027195"}


id: PBO:0031104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_microtubule_depolymerizing_drugs","termid":"PBO:0031104"}


id: PBO:0000647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3a (predicted)","termid":"PBO:0000647"}


id: FYPO:0008262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mannosylinositol phosphorylceramide  measured in a cell is too low to detect.","definition_xrefs":["PMID:20388730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular mannosylinositol phosphorylceramide level","termid":"FYPO:0008261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mannosylinositol phosphorylceramide absent from cell","termid":"FYPO:0008262"}


id: PBO:0073857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A6","termid":"PBO:0073857"}


id: MONDO:0006915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases characterized by injury or dysfunction involving multiple peripheral nerves and nerve roots. The process may primarily affect myelin or nerve axons. Two of the more common demyelinating forms are acute inflammatory polyradiculopathy (guillain-barre syndrome) and polyradiculoneuropathy, chronic inflammatory demyelinating. Polyradiculoneuritis refers to inflammation of multiple peripheral nerves and spinal nerve roots.","definition_xrefs":["MESH:D011129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"},{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"polyradiculoneuropathy","secondary_identifiers":["UMLS:C0032587","DOID:4308","SCTID:128078004","MEDGEN:46012","EFO:1001116"],"termid":"MONDO:0006915","xrefs":{"Monarch":{"xref_id":"0006915"}}}


id: MONDO:1010484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, horse","secondary_identifiers":["OMIA:000994-9796"],"termid":"MONDO:1010484","xrefs":{"Monarch":{"xref_id":"1010484"}}}


id: GO:0047942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + ATP + ethylamine = N(5)-ethyl-L-glutamine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.1.6","RHEA:20525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamate-ethylamine ligase activity","secondary_identifiers":["MetaCyc:RXN-12905","KEGG_REACTION:R02929"],"synonyms":[{"name":"L-glutamate:ethylamine ligase (ADP-forming)","type":"related"},{"name":"N(5)-ethyl-L-glutamine synthetase activity","type":"related"},{"name":"N5-ethyl-L-glutamine synthetase activity","type":"related"},{"name":"N5-ethylglutamine synthetase activity","type":"related"},{"name":"theanine synthetase activity","type":"related"}],"termid":"GO:0047942"}


id: FYPO:0000570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mating projection assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased shmoo formation","synonyms":[{"name":"decreased conjugation tube formation","type":"exact"},{"name":"decreased mating projection assembly","type":"exact"},{"name":"decreased mating projection formation","type":"exact"},{"name":"decreased shmoo assembly","type":"exact"},{"name":"reduced shmoo formation","type":"exact"},{"name":"shmoo formation: decreased","type":"related"}],"termid":"FYPO:0000570"}


id: PR:O14311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation protein SPT3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04684","PRO:DNx","PANTHER:PTHR11380:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit spt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC61.02","secondary_identifiers":["UniProtKB:O14311"],"synonyms":[{"name":"Spom972h-SUPT3H","type":"exact"}],"termid":"PR:O14311"}


id: PBO:0113007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asn rich cytoplasmic protein with a role in clathrin suppresion; contains RGG motifs; high-copy suppressor of group II intron-splicing defects of a mutation in MRS2 and of a conditional mutation in POL1 (DNA polymerase alpha); possible role in mitochondrial mRNA splicing","termid":"PBO:0113007"}


id: PBO:0058174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4469","termid":"PBO:0058174"}


id: GO:0042164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the alpha subunit of interleukin-12.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-12 binding","termid":"GO:0019972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-12 alpha subunit binding","synonyms":[{"name":"CLMFp35 binding","type":"exact"},{"name":"IL-12A binding","type":"exact"},{"name":"IL-12p35 binding","type":"exact"},{"name":"NKSFp35 binding","type":"exact"}],"termid":"GO:0042164"}


id: PR:Q9P6I9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cha4 gene.","definition_xrefs":["UniProtKB:Q9P6I9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1683.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.13c","synonyms":[{"name":"Spom972h-cha4","type":"exact"}],"termid":"PR:Q9P6I9"}


id: GO:0032035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the tail region of a myosin II heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin tail binding","termid":"GO:0032029"},{"relation_name":"is_a","term_name":"myosin II heavy chain binding","termid":"GO:0032038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"myosin II tail binding","termid":"GO:0032035"}


id: PBO:0089686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial oxidoreductase-like protein, human OXLD1 ortholog","termid":"PBO:0089686"}


id: PBO:0030828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylformylglycinamidine_cyclo-ligase_activity","termid":"PBO:0030828"}


id: PBO:0090537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine aminotransferase Alt1","termid":"PBO:0090537"}


id: PR:O13601
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsp1 gene.","definition_xrefs":["UniProtKB:O13601","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ-related protein rsp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.05c","synonyms":[{"name":"Spom972h-rsp1","type":"exact"}],"termid":"PR:O13601"}


id: PBO:0041086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and PHD finger containing 1","termid":"PBO:0041086"}


id: GO:1904380
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66548],"is_not":false,"summary":null,"term":"GO:1904380"}]},"cv_name":"biological_process","definition":"Any protein alpha-1,2-demannosylation that takes place in the endoplasmic reticulum quality control compartment (ERQC).","definition_xrefs":["PMID:24519966","GOC:bf","GOC:TermGenie","GO_REF:0000062","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein alpha-1,2-demannosylation","termid":"GO:0036508"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum mannose trimming","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["Reactome:R-HSA-901032"],"synonyms":[{"name":"ER mannose trimming","type":"exact"},{"name":"ER protein alpha-1,2-demannosylation","type":"exact"},{"name":"glycoprotein mannose trimming in ER quality control compartment","type":"related"},{"name":"glycoprotein mannose trimming in ER-derived quality control compartment","type":"related"},{"name":"glycoprotein mannose trimming in ERQC","type":"related"},{"name":"glycoprotein mannose trimming in endoplasmic reticulum quality control compartment","type":"related"},{"name":"protein alpha-1,2-demannosylation in ER","type":"exact"},{"name":"protein alpha-1,2-demannosylation in ER quality control compartment","type":"exact"},{"name":"protein alpha-1,2-demannosylation in ER-derived quality control compartment","type":"related"},{"name":"protein alpha-1,2-demannosylation in ERQC","type":"exact"},{"name":"protein alpha-1,2-demannosylation in endoplasmic reticulum","type":"exact"},{"name":"protein alpha-1,2-demannosylation in endoplasmic reticulum quality control compartment","type":"exact"}],"termid":"GO:1904380","terms_by_termid":{"GO:1904380":null}}


id: PBO:0091782
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing protein","termid":"PBO:0091782"}


id: PBO:0065249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20B","termid":"PBO:0065249"}


id: PBO:0068729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 18, pseudogene","termid":"PBO:0068729"}


id: PBO:0001275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase complex catalytic subunit Cpd1","termid":"PBO:0001275"}


id: PBO:0082815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved fungal gene linked to DNA repair and proteasome function; putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YPL260W is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0082815"}


id: GO:0033701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-D-galactose + 2 NADP+ + H2O = dTDP-D-galacturonate + 2 NADPH + 2 H+.","definition_xrefs":["EC:1.1.1.186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dTDP-galactose 6-dehydrogenase activity","secondary_identifiers":["RHEA:12396","MetaCyc:DTDP-GALACTOSE-6-DEHYDROGENASE-RXN"],"synonyms":[{"name":"dTDP-D-galactose:NADP+ 6-oxidoreductase activity","type":"related"},{"name":"dTDPgalactose 6-dehydrogenase activity","type":"related"},{"name":"thymidine-diphosphate-galactose dehydrogenase activity","type":"related"}],"termid":"GO:0033701"}


id: GO:0033560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydrofolate + NADP+ = folate + NADPH + H+.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"folate reductase activity","secondary_identifiers":["Reactome:R-HSA-9709098","RHEA:31103","Reactome:R-HSA-197963","Reactome:R-HSA-197972"],"termid":"GO:0033560"}


id: MOD:01743
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-128 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"},{"relation_name":"derives_from","term_name":"cysTMT6plex-128 reporter+balance reagent cysteine disulfide","termid":"MOD:01825"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-128 reporter fragment","type":"exact"}],"termid":"MOD:01743"}


id: PBO:0060687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-deacetylase and N-sulfotransferase 2","termid":"PBO:0060687"}


id: PBO:0018028
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae POL2","termid":"PBO:0018028"}


id: PR:Q04800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH oxidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02342","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric reductase transmembrane component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.09c","secondary_identifiers":["UniProtKB:Q04800"],"synonyms":[{"name":"Spom972h-NOX1","type":"exact"},{"name":"ferric-chelate reductase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q04800"}


id: PBO:0084720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; binds to the 5' UTR of the COX3 mRNA to activate its translation together with Pet122p and Pet494p; also binds to the COX1 Group I intron AI5 beta to facilitate exon ligation during splicing; also stimulates efficient synthesis of Cox1p","termid":"PBO:0084720"}


id: GO:0032482
data:
  {"annotated_genes":["SJAG_03488","SJAG_04329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69861,74543],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032483"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rab subfamily relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03488":null,"SJAG_04329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Rab protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032482","terms_by_termid":{"GO:0032483":null}}


id: GO:1904106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a microvillus.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000087","PMID:25335890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to microvillus","synonyms":[{"name":"protein localisation in microvillus","type":"exact"},{"name":"protein localisation to microvillus","type":"exact"},{"name":"protein localization in microvillus","type":"exact"}],"termid":"GO:1904106"}


id: PBO:0089780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase","termid":"PBO:0089780"}


id: GO:0015877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of biopterin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Biopterin is a growth factor for certain protozoans and some insects; it is widely distributed in tissues and functions in a reduced form, tetrahydrobiopterin, as a hydroxylation coenzyme.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"biopterin transport","termid":"GO:0015877"}


id: GO:0140399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: 8-O-methylsterigmatocystin + 2 [reduced NADPH--hemoprotein reductase] + 2 O2 = aflatoxin B + 2 [oxidized NADPH--hemoprotein reductase] + H2O + methanol + CO2. Produces both aflatoxin B(1) and aflatoxin B(2).","definition_xrefs":["EC:1.14.14.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aflatoxin B synthase activity","termid":"GO:0140399"}


id: PBO:0081406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 253","termid":"PBO:0081406"}


id: GO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the smaller branches of an axon that emanate from the main axon cylinder.","definition_xrefs":["NIF_Subcellular:sao1470140754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon collateral","termid":"GO:0044303"}


id: PBO:0002898
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.59","termid":"PBO:0002898"}


id: MONDO:0001748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the maxillary sinus. Representative examples include squamous cell carcinoma, adenocarcinoma, and adenoid cystic carcinoma.","definition_xrefs":["NCIT:C9332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"jaw cancer","termid":"MONDO:0002131"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"},{"relation_name":"is_a","term_name":"maxillary sinus neoplasm","termid":"MONDO:0006850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"maxillary sinus carcinoma","secondary_identifiers":["UMLS:C0740487","MEDGEN:196632","SCTID:363425008","DOID:1357","NCIT:C3540","ICD9:160.2"],"synonyms":[{"name":"cancer of maxillary sinus","type":"exact"},{"name":"carcinoma of maxillary sinus","type":"exact"},{"name":"malignant maxillary sinus neoplasm","type":"exact"},{"name":"malignant maxillary sinus tumor","type":"exact"},{"name":"malignant maxillary sinus tumour","type":"exact"},{"name":"malignant neoplasm of antrum","type":"exact"},{"name":"malignant neoplasm of maxillary sinus","type":"exact"},{"name":"malignant neoplasm of the maxillary sinus","type":"exact"},{"name":"malignant tumor of maxillary sinus","type":"exact"},{"name":"malignant tumor of the maxillary sinus","type":"exact"},{"name":"malignant tumour of maxillary sinus","type":"exact"},{"name":"malignant tumour of the maxillary sinus","type":"exact"},{"name":"maxillary sinus cancer","type":"exact"},{"name":"maxillary sinus carcinoma","type":"exact"}],"termid":"MONDO:0001748","xrefs":{"Monarch":{"xref_id":"0001748"}}}


id: PBO:0084790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins","termid":"PBO:0084790"}


id: PBO:0086286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in cellular adhesion and filamentous growth; similar to Tmn3p; member of the evolutionarily conserved Transmembrane Nine family of proteins with nine membrane-spanning segments; TMN2 has a paralog, EMP70, that arose from the whole genome duplication","termid":"PBO:0086286"}


id: GO:1904894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor signaling pathway via STAT.","definition_xrefs":["GOC:rjd","GO_REF:0000058","PMID:24587195","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via STAT","termid":"GO:1904892"},{"relation_name":"positively_regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor signaling pathway via STAT","secondary_identifiers":["Reactome:R-HSA-9027283"],"synonyms":[{"name":"activation of STAT cascade","type":"narrow"},{"name":"activation of STAT signalling pathway","type":"narrow"},{"name":"activation of kinase activated-STAT cascade","type":"narrow"},{"name":"activation of kinase-STAT cascade","type":"narrow"},{"name":"positive regulation of STAT signalling pathway","type":"exact"},{"name":"positive regulation of kinase activated-STAT cascade","type":"exact"},{"name":"positive regulation of kinase-STAT cascade","type":"exact"},{"name":"up regulation of STAT cascade","type":"exact"},{"name":"up regulation of STAT signalling pathway","type":"exact"},{"name":"up regulation of kinase activated-STAT cascade","type":"exact"},{"name":"up regulation of kinase-STAT cascade","type":"exact"},{"name":"up-regulation of STAT cascade","type":"exact"},{"name":"up-regulation of STAT signalling pathway","type":"exact"},{"name":"up-regulation of kinase activated-STAT cascade","type":"exact"},{"name":"up-regulation of kinase-STAT cascade","type":"exact"},{"name":"upregulation of STAT cascade","type":"exact"},{"name":"upregulation of STAT signalling pathway","type":"exact"},{"name":"upregulation of kinase activated-STAT cascade","type":"exact"},{"name":"upregulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904894"}


id: PATO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of whether the bearer's being covered by a liquid.","definition_xrefs":["wordreference.com:wordreference.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wetness","termid":"PATO:0001822"}


id: SO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced","termid":"SO:0000893"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_gene","synonyms":[{"name":"silenced gene","type":"exact"}],"termid":"SO:0000127"}


id: PBO:0012554
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae Dbr1","termid":"PBO:0012554"}


id: FYPO:0002652
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119243,119255,119246,119258,119244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more intracellular endomembrane system structures than normal. The endomembrane system includes the endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope; in this phenotype, excess plasma membrane does not accumulate, but increased amounts of one or more internal intracellular endomembrane system structures may be present.","definition_xrefs":["PMID:21899677","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system","termid":"FYPO:0002404"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":5,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"excess intracellular endomembrane system present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_01906","SJAG_02763","SJAG_03940"],"single_locus_genotype_uniquenames":["ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","nem1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta"],"synonyms":[{"name":"accumulation of internal endomembrane system structures","type":"exact"},{"name":"excess intracellular endomembrane system present during mitotic cell cycle","type":"related"},{"name":"excess intracellular endomembrane system present during vegetative growth","type":"exact"},{"name":"increased level of intracellular endomembrane system structures","type":"related"},{"name":"intracellular endomembrane system structures present in greater numbers","type":"exact"}],"termid":"FYPO:0002652","terms_by_termid":{"FYPO:0001784":null,"FYPO_EXT:0000001":null}}


id: MONDO:0000488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A adenoma that involves the periampullary region of duodenum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ampulla of vater neoplasm","termid":"MONDO:0000921"},{"relation_name":"is_a","term_name":"adenoma of small intestine","termid":"MONDO:0021303"},{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"periampullary adenoma","secondary_identifiers":["DOID:0050849"],"synonyms":[{"name":"periampullary region of duodenum adenoma","type":"exact"}],"termid":"MONDO:0000488","xrefs":{"Monarch":{"xref_id":"0000488"}}}


id: PBO:0087759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ubiqunol-cytochrome c oxidoreductase complex; this complex comprises part of the mitochondrial respiratory chain; members include Cobp, Rip1p, Cyt1p, Cor1p, Qcr2p, Qcr6p, Qcr7p, Qcr8p, Qcr9p, and Qcr10p and comprises part of the mitochondrial respiratory chain","termid":"PBO:0087759"}


id: FYPO:0002073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during a cellular response to copper ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to nucleus during cellular response to copper ion","synonyms":[{"name":"ectopic protein localization to nucleus during cellular response to copper","type":"exact"},{"name":"nuclear protein accumulation in response to copper","type":"related"},{"name":"protein mislocalised to nucleus during cellular response to copper ion","type":"exact"},{"name":"protein mislocalised to nucleus during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to copper","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to copper during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to nucleus during cellular response to copper ion during vegetative growth","type":"exact"}],"termid":"FYPO:0002073"}


id: PBO:0053438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 383","termid":"PBO:0053438"}


id: PBO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX domain protein","termid":"PBO:0000462"}


id: GO:0006717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete juvenile hormone binding (obsolete GO:0006717)","synonyms":[{"name":"juvenile hormone binding","type":"exact"}],"termid":"GO:0006717"}


id: PBO:0049817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 9","termid":"PBO:0049817"}


id: PBO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase Pis1 (predicted)","termid":"PBO:0000509"}


id: PBO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HbrB family protein","termid":"PBO:0001537"}


id: SO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short (typically a few hundred base pairs) DNA sequence that has a single occurrence in a genome and whose location and base sequence are known.","direct_ancestors":[{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STS","synonyms":[{"name":"INSDC_feature:STS","type":"exact"},{"name":"sequence tag site","type":"exact"}],"termid":"SO:0000331"}


id: PBO:0005592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific protein kinase Mug27/Slk1","termid":"PBO:0005592"}


id: GO:0009659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a leucoplast. A leucoplast is a colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucoplast organization","synonyms":[{"name":"leucoplast organisation","type":"exact"},{"name":"leucoplast organization and biogenesis","type":"related"}],"termid":"GO:0009659"}


id: PBO:0108553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific Smp foci lncRNA Sme2 (meiRNA), long isoform","termid":"PBO:0108553"}


id: GO:0047851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an omega-dicarboxylic acid + CoASH= AMP + diphosphate + an omega-carboxyacyl-CoA.","definition_xrefs":["MetaCyc:DICARBOXYLATE--COA-LIGASE-RXN","EC:6.2.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"dicarboxylate-CoA ligase activity","secondary_identifiers":["RHEA:14289"],"synonyms":[{"name":"carboxylyl-CoA synthetase activity","type":"related"},{"name":"omega-dicarboxylate:CoA ligase (AMP-forming)","type":"related"}],"termid":"GO:0047851"}


id: FYPO:0002286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to osmotic stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to osmotic stress","termid":"FYPO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to osmotic stress","synonyms":[{"name":"decreased RNA level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to osmotic stress","type":"narrow"},{"name":"decreased transcript level during cellular response to osmotic stress","type":"exact"},{"name":"reduced RNA level during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0002286"}


id: GO:0045777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased.","definition_xrefs":["GOC:mtg_cardio","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure","synonyms":[{"name":"activation of blood pressure","type":"narrow"},{"name":"stimulation of blood pressure","type":"narrow"},{"name":"up regulation of blood pressure","type":"exact"},{"name":"up-regulation of blood pressure","type":"exact"},{"name":"upregulation of blood pressure","type":"exact"}],"termid":"GO:0045777"}


id: PBO:0084830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for transamination of isoleucine; but not of valine or leucine; may regulate specificity of branched-chain transaminases Bat1p and Bat2p; induction of expression in response to stress is mediated by a Hog1p-regulated antisense RNA and gene looping; interacts genetically with mitochondrial ribosomal protein genes; MMF1 has a paralog, HMF1, that arose from the whole genome duplication","termid":"PBO:0084830"}


id: GO:0070516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the cyclin-dependent protein kinase activating kinase (CAK) holoenzyme complex with ERCC2.","definition_xrefs":["PMID:8692841","PMID:8692842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CAK-ERCC2 complex","synonyms":[{"name":"cyclin-dependent protein kinase activating kinase holoenzyme-ERCC2 complex","type":"exact"}],"termid":"GO:0070516"}


id: GO:0004986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of delta-opioid receptors, including the activity of enkephalins as ligands.","definition_xrefs":["IUPHAR_RECEPTOR:317","PMID:10471416"],"gene_count":0,"genotype_count":0,"name":"obsolete delta-opioid receptor activity (obsolete GO:0004986)","secondary_identifiers":["Wikipedia:Delta_Opioid_receptor"],"synonyms":[{"name":"delta-opioid receptor activity","type":"exact"}],"termid":"GO:0004986"}


id: PBO:0040341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit e","termid":"PBO:0040341"}


id: PBO:0088535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin-A, F-box protein Pof4","termid":"PBO:0088535"}


id: FYPO:0001752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of homocitrate synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased homocitrate synthase activity","synonyms":[{"name":"reduced homocitrate synthase activity","type":"exact"}],"termid":"FYPO:0001752"}


id: MONDO:1012321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudocholinesterase deficiency, non-human animal","termid":"MONDO:1011715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudocholinesterase deficiency, horse","secondary_identifiers":["OMIA:001205-9796"],"termid":"MONDO:1012321","xrefs":{"Monarch":{"xref_id":"1012321"}}}


id: PBO:0049760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C2","termid":"PBO:0049760"}


id: PBO:0087760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of THO/TREX complexes; this complex couple transcription elongation with mitotic recombination and with mRNA metabolism and export, subunit of an RNA Pol II complex; regulates lifespan; involved in telomere maintenance; similar to Top1p","termid":"PBO:0087760"}


id: GO:0055065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of metal ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:mah","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete metal ion homeostasis (obsolete GO:0055065)","termid":"GO:0055065"}


id: PBO:0076606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 25","termid":"PBO:0076606"}


id: PBO:0091640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing","termid":"PBO:0091640"}


id: PATO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001060 absolute efficiency (obsolete PATO:0001060)","termid":"PATO:0001060"}


id: GO:0098880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which maintains the organization and the arrangement of proteins in the presynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density organization","termid":"GO:0097106"},{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of postsynaptic specialization structure","termid":"GO:0098880"}


id: GO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which B cells acquire the specialized features of B-1b B cells. B-1b B cells are B-1 cells that do not express CD5.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1b B cell differentiation","synonyms":[{"name":"B-1b B cell development","type":"related"},{"name":"B-1b B lymphocyte differentiation","type":"exact"},{"name":"B-1b B-cell differentiation","type":"exact"},{"name":"B-1b B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002338"}


id: PBO:0005167
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-Associated Factor","termid":"PBO:0005167"}


id: GO:0034783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pivalate + H+ + HSCoA + ATP = pivalyl-CoA + PPi + AMP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pivalate-CoA ligase activity (obsolete GO:0034783)","termid":"GO:0034783"}


id: PBO:0065721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA, SNRPN neighbor","termid":"PBO:0065721"}


id: FYPO:0005624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ultraviolet light during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to UV during vegetative growth","termid":"FYPO:0000268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to UV during mitotic S phase","synonyms":[{"name":"decreased growth during cellular response to UV during mitotic S phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to UV during mitotic S phase","type":"exact"},{"name":"hypersensitive to UV during mitotic S phase","type":"exact"},{"name":"increased sensitivity to UV irradiation during mitotic S phase","type":"exact"},{"name":"sensitive to UV during S phase during vegetative growth","type":"exact"},{"name":"sensitive to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"sensitive to ultraviolet light during mitotic S phase","type":"exact"}],"termid":"FYPO:0005624"}


id: FYPO:0007894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is increased at subtelomeric heterochromatin. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PMID:34731638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein ubiquitination during vegetative growth","termid":"FYPO:0002082"},{"relation_name":"is_a","term_name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0005607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2B-K119 ubiquitination at subtelomeric heterochromatin","termid":"FYPO:0007894"}


id: MONDO:0022712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculo digital syndrome","secondary_identifiers":["MEDGEN:419324","MESH:C535922","UMLS:C2931063"],"synonyms":[{"name":"Chemke Oliver Mallek syndrome","type":"related"},{"name":"Chemke-Oliver-Mallek syndrome","type":"related"},{"name":"multiple ophthalmic anomalies and digital hypoplasia","type":"related"}],"termid":"MONDO:0022712","xrefs":{"Monarch":{"xref_id":"0022712"}}}


id: GO:0005872
data:
  {"annotated_genes":["SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98975],"is_not":false,"summary":null,"term":"GO:0005872"}]},"cv_name":"cellular_component","definition":"Any complex that includes a dimer of molecules from the kinesin superfamily and any associated proteins, and moves towards the minus end of a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"minus-end kinesin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005872","terms_by_termid":{"GO:0005872":null}}


id: MONDO:0003203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pituitary carcinoma (obsolete MONDO:0003203)","termid":"MONDO:0003203","xrefs":{"Monarch":{"xref_id":"0003203"}}}


id: GO:0023065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via blood.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via blood (obsolete GO:0023065)","synonyms":[{"name":"signal transmission via blood","type":"exact"}],"termid":"GO:0023065"}


id: FYECO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Nitrogen was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000062 absence of nitrogen (obsolete FYECO:0000062)","termid":"FYECO:0000062"}


id: PBO:0034253
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_parallelism_relationship_with","termid":"PBO:0034253"}


id: GO:0018970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products such as gasoline and commonly used as a paint thinning agent and in other solvent applications.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene metabolic process","synonyms":[{"name":"methylbenzene metabolic process","type":"exact"},{"name":"methylbenzene metabolism","type":"exact"},{"name":"toluene metabolism","type":"exact"}],"termid":"GO:0018970"}


id: MONDO:0020038
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gonadal dysgenesis of gynecological interest (obsolete MONDO:0020038)","secondary_identifiers":["Orphanet:98074"],"termid":"MONDO:0020038","xrefs":{"Monarch":{"xref_id":"0020038"}}}


id: PBO:0079185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 14, pseudogene","termid":"PBO:0079185"}


id: GO:0099607
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  {"annotated_genes":["SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108007],"is_not":false,"summary":null,"term":"GO:0099607"}]},"cv_name":"biological_process","definition":"The cellular process in which sister chromatids become laterally attached to spindle microtubules as part of mitotic metaphase plate congression. Attachment precedes migration along microtubules towards the spindle equator (metaphase plate).","definition_xrefs":["PMID:26705896","PMID:26258632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0051315"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"lateral attachment of mitotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099607","terms_by_termid":{"GO:0099607":null}}


id: PATO:0002257
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cuscpidate quality inhering in a bearer by virtue of the bearer possessing more than one cusp.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuspidate","termid":"PATO:0001973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multicuspidate","termid":"PATO:0002257"}


id: PBO:0090758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 2","termid":"PBO:0090758"}


id: PBO:0112905
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-remodelling mannose-ethanolamine phosphate phosphodiesterase Ted2","termid":"PBO:0112905"}


id: PBO:0031825
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_modification","termid":"PBO:0031825"}


id: GO:0034938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + pyrrole-2-carboxylate = 5-hydroxypyrrole-2-carboxylate + H2O + NAD+.","definition_xrefs":["RHEA:30351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pyrrole-2-carboxylate monooxygenase (NADH) activity","secondary_identifiers":["EC:1.14.13.130","UM-BBD_reactionID:r0968"],"termid":"GO:0034938"}


id: MONDO:0002515
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  {"annotated_genes":["SJAG_02015","SJAG_01012","SJAG_01841","SJAG_04109","SJAG_01950","SJAG_04277","SJAG_02876","SJAG_03961","SJAG_00358","SJAG_03011","SJAG_00175","SJAG_02049","SJAG_03363","SJAG_00938","SJAG_00409","SJAG_03535","SJAG_04944","SJAG_05194","SJAG_02896","SJAG_01372","SJAG_04956","SJAG_01166"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013111"},{"annotations":[85088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[86560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[87055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012672"},{"annotations":[86807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[86745,86744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[85649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[85489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[86412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[85641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[85696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024568"},{"annotations":[84902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014659"},{"annotations":[86617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032844"},{"annotations":[85118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"},{"annotations":[85899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008265"},{"annotations":[85838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014860"},{"annotations":[84877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054743"},{"annotations":[85234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[86683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"},{"annotations":[84926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[86430,86429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013771"},{"annotations":[85508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[86154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[86492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the liver, bile ducts, and gallbladder. Representative examples of non-neoplastic disorders include hepatitis, cirrhosis, cholangitis, and cholecystitis. 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id: PR:000027574
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:20929775","PomBase:MAH","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1 (Schizosaccharomyces pombe)","termid":"PR:000027570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-","type":"exact"}],"termid":"PR:000027574"}


id: GO:0005856
data:
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id: GO:0075530
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id: PR:O14139
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chromodomain-helicase-DNA-binding protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase hrp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.01","secondary_identifiers":["UniProtKB:O14139"],"synonyms":[{"name":"ATP-dependent helicase hrp3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CHD2","type":"exact"}],"termid":"PR:O14139"}


id: PBO:0042549
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id: PBO:0063931
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id: MONDO:0001430
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id: PBO:0056949
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id: FYPO:0008098
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id: MOD:00605
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id: MONDO:0009092
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id: GO:0005675
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id: PATO:0002483
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id: PBO:0087969
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id: PBO:0057592
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id: GO:0062239
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id: PBO:0031532
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id: PBO:0072428
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id: PBO:0063334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen","termid":"PBO:0063334"}


id: PBO:0058717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6845","termid":"PBO:0058717"}


id: PBO:0073897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 13 member 3","termid":"PBO:0073897"}


id: PBO:0086632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; not an essential gene; YPL229W has a paralog, YMR181C, that arose from the whole genome duplication","termid":"PBO:0086632"}


id: PBO:0056173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maelstrom spermatogenic transposon silencer","termid":"PBO:0056173"}


id: MONDO:0013828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary hyperekplexia in which the cause of the disease is a mutation in the GLRB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperekplexia","termid":"MONDO:0021022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperekplexia 2","secondary_identifiers":["GARD:15826","DOID:0060697","MEDGEN:766205","OMIM:614619","UMLS:C3553291"],"synonyms":[{"name":"GLRB hereditary hyperekplexia","type":"exact"},{"name":"HKPX2","type":"exact"},{"name":"hereditary hyperekplexia caused by mutation in GLRB","type":"exact"},{"name":"hyperekplexia 2","type":"exact"},{"name":"hyperekplexia type 2","type":"exact"}],"termid":"MONDO:0013828","xrefs":{"Monarch":{"xref_id":"0013828"}}}


id: MONDO:0010543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Barth syndrome (BTHS) is an inborn error of phospholipid metabolism characterized by dilated cardiomyopathy (DCM), skeletal myopathy, neutropenia, growth delay and organic aciduria.","definition_xrefs":["Orphanet:111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005046","MONDO:0005336","MONDO:0005066","MONDO:0004736","MONDO:0005267","MONDO:0002525","MONDO:0005570"],"is_obsolete":false,"name":"Barth syndrome","secondary_identifiers":["icd11.foundation:452199926","SCTID:297231002","OMIM:302060","NANDO:2200751","MEDGEN:107893","NCIT:C84585","ICD10CM:E78.71","NORD:840","NANDO:1200991","UMLS:C0574083","MESH:D056889","DOID:0050476","GARD:5890"],"synonyms":[{"name":"3-Methylglutaconic aciduria, type 2","type":"related"},{"name":"3-Methylglutaconicaciduria type 2","type":"exact"},{"name":"3-Methylglutaconicaciduria type II","type":"exact"},{"name":"3-methylglutaconic aciduria type 2","type":"exact"},{"name":"3-methylglutaconic aciduria type II","type":"related"},{"name":"BARTH syndrome","type":"related"},{"name":"BTHS","type":"exact"},{"name":"Barth syndrome","type":"exact"},{"name":"Barth syndrome, X-linked recessive","type":"exact"},{"name":"MGA type 2","type":"exact"},{"name":"MGA type II","type":"exact"},{"name":"MGA2","type":"exact"},{"name":"Mga, type 2","type":"related"},{"name":"TAZ defect","type":"related"},{"name":"X-linked cardioskeletal myopathy and neutropenia","type":"exact"},{"name":"cardioskeletal myopathy with neutropenia and abnormal mitochondria","type":"exact"},{"name":"cardioskeletal myopathy-neutropenia syndrome","type":"exact"}],"termid":"MONDO:0010543","xrefs":{"Monarch":{"xref_id":"0010543"}}}


id: PBO:0075142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPB2 pseudogene 1","termid":"PBO:0075142"}


id: MONDO:0009918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Sorsby fundus dystrophy","termid":"MONDO:0007640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"fundus dystrophy, pseudoinflammatory, recessive form","secondary_identifiers":["GARD:9633","MEDGEN:337888","MESH:C535828","UMLS:C1849694","OMIM:264420"],"synonyms":[{"name":"PFD Lavia type","type":"related"},{"name":"Pfd, Finnish type","type":"related"},{"name":"Pfd, Lavia type","type":"related"},{"name":"fundus dystrophy, pseudoinflammatory recessive form","type":"related"},{"name":"fundus dystrophy, pseudoinflammatory, recessive form","type":"exact"},{"name":"pseudoinflammatory fundus dystrophy","type":"related"}],"termid":"MONDO:0009918","xrefs":{"Monarch":{"xref_id":"0009918"}}}


id: GO:0045642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of basophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte differentiation","termid":"GO:0030854"},{"relation_name":"is_a","term_name":"regulation of basophil differentiation","termid":"GO:0045640"},{"relation_name":"positively_regulates","term_name":"basophil differentiation","termid":"GO:0030221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of basophil differentiation","synonyms":[{"name":"activation of basophil differentiation","type":"narrow"},{"name":"stimulation of basophil differentiation","type":"narrow"},{"name":"up regulation of basophil differentiation","type":"exact"},{"name":"up-regulation of basophil differentiation","type":"exact"},{"name":"upregulation of basophil differentiation","type":"exact"}],"termid":"GO:0045642"}


id: MONDO:0019452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This subgroup of myeloproliferative neoplasms includes cases which do not meet the morphologic criteria of any of the defined myeloproliferative neoplasms, or which have characteristics that overlap at least two of the myeloproliferative neoplasms.","definition_xrefs":["NCIT:C27350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"myeloproliferative neoplasm, unclassifiable","secondary_identifiers":["ICDO:9975/3","GARD:16764","UMLS:C1333046","MEDGEN:232365","Orphanet:86830"],"synonyms":[{"name":"CMPD, U","type":"exact"},{"name":"CMPD-U","type":"exact"},{"name":"MPN, U","type":"exact"},{"name":"MPN-U","type":"exact"},{"name":"chronic myeloproliferative disease, unclassifiable","type":"exact"},{"name":"chronic myeloproliferative disorder, unclassifiable","type":"exact"},{"name":"myeloproliferative neoplasm, unclassifiable","type":"exact"},{"name":"unclassifiable chronic myeloproliferative disease","type":"exact"},{"name":"unclassifiable chronic myeloproliferative disorder","type":"exact"},{"name":"undifferentiated myeloproliferative disease","type":"exact"}],"termid":"MONDO:0019452","xrefs":{"Monarch":{"xref_id":"0019452"}}}


id: PBO:0057182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 337","termid":"PBO:0057182"}


id: MONDO:0010019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"selective IgA deficiency disease","termid":"MONDO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"secretory component deficiency","secondary_identifiers":["MEDGEN:140769","MESH:C562869","ICD9:279.03","OMIM:269650","SCTID:234554004","UMLS:C0398709"],"synonyms":[{"name":"IgA deficiency, secretory","type":"related"},{"name":"secretory component deficiency","type":"exact"}],"termid":"MONDO:0010019","xrefs":{"Monarch":{"xref_id":"0010019"}}}


id: PBO:0071043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 45","termid":"PBO:0071043"}


id: PBO:0075116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 165","termid":"PBO:0075116"}


id: PBO:0076620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor C","termid":"PBO:0076620"}


id: PBO:0058779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7113","termid":"PBO:0058779"}


id: GO:0005145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an interleukin-14 receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 receptor binding (obsolete GO:0005145)","synonyms":[{"name":"IL-14","type":"narrow"},{"name":"interleukin-14 receptor ligand","type":"narrow"}],"termid":"GO:0005145"}


id: GO:0033218
data:
  {"annotated_genes":["SJAG_01458","SJAG_03690","SJAG_00869","SJAG_01351","SJAG_05181","SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097001"},{"annotations":[70227,99036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043295"},{"annotations":[75673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"},{"annotations":[59097,64728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031177"}]},"cv_name":"molecular_function","definition":"Binding to an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00869":null,"SJAG_01351":null,"SJAG_01458":null,"SJAG_03690":null,"SJAG_04031":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033218","terms_by_termid":{"GO:0031177":null,"GO:0036042":null,"GO:0043295":null,"GO:0097001":null}}


id: GO:0004781
data:
  {"annotated_genes":["SJAG_03475"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66517],"is_not":false,"summary":null,"term":"GO:0004781"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H+ + sulfate = adenosine 5'-phosphosulfate + diphosphate.","definition_xrefs":["EC:2.7.7.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate adenylyltransferase activity","termid":"GO:0004779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03475":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"sulfate adenylyltransferase (ATP) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-174392","MetaCyc:SULFATE-ADENYLYLTRANS-RXN","RHEA:18133","Reactome:R-HSA-3560794"],"synonyms":[{"name":"ATP sulfurylase activity","type":"related"},{"name":"ATP-sulfurylase activity","type":"related"},{"name":"ATP:sulfate adenylyltransferase activity","type":"exact"},{"name":"adenosine-5'-triphosphate sulfurylase activity","type":"related"},{"name":"adenosinetriphosphate sulfurylase activity","type":"related"},{"name":"adenylylsulfate pyrophosphorylase activity","type":"related"},{"name":"sulfate adenylate transferase activity","type":"related"},{"name":"sulfurylase activity","type":"related"},{"name":"sulphate adenylyltransferase (ATP) activity","type":"exact"}],"termid":"GO:0004781","terms_by_termid":{"GO:0004781":null}}


id: MONDO:0044723
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86771,86772],"is_not":false,"summary":null,"term":"MONDO:0044723"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:505208","UMLS:C4310650","MEDGEN:934617","DOID:0070000","GARD:22050","OMIM:617248"],"synonyms":[{"name":"3-Methylglutaconic aciduria, type 8","type":"related"},{"name":"3-methylglutaconic aciduria type VIII","type":"related"},{"name":"3-methylglutaconic aciduria type VIII, MGCA8","type":"exact"},{"name":"3-methylglutaconic aciduria, type VIII","type":"exact"},{"name":"3-methylglutaconic aciduria, type VIII; MGCA8","type":"exact"},{"name":"MGA8","type":"exact"},{"name":"MGCA8","type":"exact"}],"termid":"MONDO:0044723","terms_by_termid":{"MONDO:0044723":null},"xrefs":{"Monarch":{"xref_id":"0044723"}}}


id: GO:0033479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-D-galacturonate, a substance composed of galacturonic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-D-galacturonate metabolic process","synonyms":[{"name":"UDP-D-galacturonate metabolism","type":"exact"}],"termid":"GO:0033479"}


id: MONDO:0023097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete exostoses anetodermia brachydactyly type E (obsolete MONDO:0023097)","termid":"MONDO:0023097","xrefs":{"Monarch":{"xref_id":"0023097"}}}


id: GO:0099553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of endocannabinoid ligands, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos","PMID:21531987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by endocannabinoid","termid":"GO:0099542"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by lipid, modulating synaptic transmission","termid":"GO:0099552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by endocannabinoid, modulating synaptic transmission","termid":"GO:0099553"}


id: PBO:0070111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 25 pseudogene","termid":"PBO:0070111"}


id: GO:1905444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of clathrin coat assembly","termid":"GO:1905443"},{"relation_name":"negatively_regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of clathrin coat assembly","synonyms":[{"name":"down regulation of clathrin cage assembly","type":"exact"},{"name":"down regulation of clathrin coat assembly","type":"exact"},{"name":"down-regulation of clathrin cage assembly","type":"exact"},{"name":"down-regulation of clathrin coat assembly","type":"exact"},{"name":"downregulation of clathrin cage assembly","type":"exact"},{"name":"downregulation of clathrin coat assembly","type":"exact"},{"name":"inhibition of clathrin cage assembly","type":"narrow"},{"name":"inhibition of clathrin coat assembly","type":"narrow"},{"name":"negative regulation of clathrin cage assembly","type":"exact"}],"termid":"GO:1905444"}


id: PBO:0084364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipase with specificity for monoacylglycerol; preferred substrate is 1-oleoylglycerol; null mutation affects lipid droplet morphology and overexpression causes increased accumulation of reactive oxygen species","termid":"PBO:0084364"}


id: PBO:0065516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine tract binding protein 1 pseudogene","termid":"PBO:0065516"}


id: GO:0106126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a reservosome.","definition_xrefs":["GOC:ach","PMID:15521631","PMID:19288526","PMID:12204365","PMID:18452191","PMID:21818313","PMID:22425988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"reservosome","termid":"GO:0106123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"reservosome membrane","termid":"GO:0106126"}


id: MONDO:0022402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of neuronal migration that is characterized by abnormal cortex morphology, with pathological features including a variably decreased brain size, enlarged ventricles representing a stage of fetal development rather than hydrocephalus, heterotopia of the inferior olivary bodies that lie between the corpus pontobulbare and their normal location, aberrant or absent corticospinal tract, heterotopia of cerebellar granules and abnormally shaped dentate nuclei.","definition_xrefs":["PMID:2063992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agyria-pachygyria type 1","secondary_identifiers":["NANDO:1201069","NANDO:1201068"],"synonyms":[{"name":"Bielchowsky type of lissencephaly","type":"exact"},{"name":"type I lissencephaly","type":"exact"}],"termid":"MONDO:0022402","xrefs":{"Monarch":{"xref_id":"0022402"}}}


id: GO:0140536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transcription corepressor activity that represses or decreases the transcription of specific gene sets via binding to a DNA-bound nuclear receptor, either on its own or as part of a complex. Nuclear receptor corepressors often act by altering chromatin structure and modifications. For example, one class of transcription nuclear receptor corepressors modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators.","definition_xrefs":["PMID:7566126","PMID:7566114","PMID:9238851"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear receptor corepressor activity (obsolete GO:0140536)","synonyms":[{"name":"nuclear corepressor activity","type":"broad"}],"termid":"GO:0140536"}


id: MONDO:1010213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic monocytic leukemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia, non-human animal","termid":"MONDO:0700100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic monocytic leukemia, non-human animal","secondary_identifiers":["OMIA:001573"],"termid":"MONDO:1010213","xrefs":{"Monarch":{"xref_id":"1010213"}}}


id: MOD:01202
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N-heptosyl-L-asparagine.","definition_xrefs":["Unimod:490#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-heptosyl-L-asparagine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01202"}


id: PBO:0050899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma inducible protein 16","termid":"PBO:0050899"}


id: PBO:0075608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondin 2","termid":"PBO:0075608"}


id: MONDO:0007480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism with stiff joints and ocular abnormalities","secondary_identifiers":["UMLS:C0265349","Orphanet:2569","MEDGEN:82709","SCTID:72913007","MESH:C535724","OMIM:127200","ICD9:759.89"],"synonyms":[{"name":"Moore-Federman syndrome","type":"related"},{"name":"dwarfism with stiff joints and ocular abnormalities","type":"exact"}],"termid":"MONDO:0007480","xrefs":{"Monarch":{"xref_id":"0007480"}}}


id: GO:0035007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that affects the rate, extent or location of the melanization defense response during injury or invasion.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"melanization defense response","termid":"GO:0035006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of melanization defense response","synonyms":[{"name":"regulation of melanization defence response","type":"exact"}],"termid":"GO:0035007"}


id: PBO:0054738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2147","termid":"PBO:0054738"}


id: MONDO:1012024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral axonopathy, non-human animal","termid":"MONDO:1011832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral axonopathy, domestic cat","secondary_identifiers":["OMIA:000099-9685"],"termid":"MONDO:1012024","xrefs":{"Monarch":{"xref_id":"1012024"}}}


id: PBO:0050691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 18","termid":"PBO:0050691"}


id: GO:0031956
data:
  {"annotated_genes":["SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76561],"is_not":false,"summary":null,"term":"GO:0031956"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain fatty acid + ATP + CoA = a medium-chain fatty acyl-CoA + AMP + diphosphate. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:48340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"medium-chain fatty acid-CoA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:6.2.1.2","Reactome:R-HSA-8875013"],"synonyms":[{"name":"medium-chain fatty acid activation","type":"related"},{"name":"medium-chain fatty-acid-CoA ligase activity","type":"exact"},{"name":"medium-chain-fatty-acid-CoA ligase activity","type":"exact"}],"termid":"GO:0031956","terms_by_termid":{"GO:0031956":null}}


id: PBO:0078215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-8","termid":"PBO:0078215"}


id: MONDO:0018120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of phospholipids, sphingolipids and fatty acids biosynthesis with skeletal muscle predominant involvement (obsolete MONDO:0018120)","secondary_identifiers":["Orphanet:352312"],"termid":"MONDO:0018120","xrefs":{"Monarch":{"xref_id":"0018120"}}}


id: PBO:0039143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 2","termid":"PBO:0039143"}


id: PBO:0043074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 3 subunit","termid":"PBO:0043074"}


id: PBO:0045473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRG1 pseudogene 2","termid":"PBO:0045473"}


id: PBO:0091235
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.101871_101872insG","termid":"PBO:0091235"}


id: GO:0048626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a myoblast in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate specification","termid":"GO:0048626"}


id: MONDO:0015463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniodigital syndrome - intellectual deficit is characterized by syndactyly of the fingers and toes, characteristic facies (`startled' facial expression with a small pointed nose, micrognathia, long dark eyelashes and prominent eyebrows) and intellectual deficit.","definition_xrefs":["Orphanet:1514"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniodigital syndrome-intellectual disability syndrome","secondary_identifiers":["MESH:C537528","OMIM:312860","GARD:4776","MEDGEN:333293","UMLS:C1839311","SCTID:763665007"],"synonyms":[{"name":"Scott Bryant Graham syndrome","type":"related"},{"name":"Scott craniodigital syndrome","type":"exact"},{"name":"Scott craniodigital syndrome with intellectual disability","type":"related"},{"name":"Scott craniodigital syndrome with mental retardation","type":"related"},{"name":"Scott-Bryant-Graham syndrome","type":"exact"},{"name":"craniodigital syndrome with intellectual disability","type":"related"},{"name":"craniodigital syndrome with mental retardation","type":"related"},{"name":"craniodigital syndrome-intellectual disability, Scott type","type":"related"},{"name":"craniodigital syndrome-mental retardation, Scott type","type":"related"},{"name":"craniodigital-intellectual disability syndrome","type":"related"}],"termid":"MONDO:0015463","xrefs":{"Monarch":{"xref_id":"0015463"}}}


id: GO:0047491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: polysaccharides containing a terminal alpha-L-guluronate group = oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl end. This reaction is the eliminative cleavage of polysaccharides containing a terminal a-L-guluronate group, to give oligopolysaccharides with 4-deoxy-a-L-erythro-hex-4-enuronosyl groups at their nonreducing ends.","definition_xrefs":["EC:4.2.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"poly(alpha-L-guluronate) lyase activity","secondary_identifiers":["MetaCyc:4.2.2.11-RXN"],"synonyms":[{"name":"L-guluronan lyase activity","type":"related"},{"name":"L-guluronate lyase activity","type":"related"},{"name":"alginase II activity","type":"related"},{"name":"guluronate lyase activity","type":"related"},{"name":"poly(alpha-L-1,4-guluronide) exo-lyase activity","type":"related"},{"name":"poly-alpha-L-guluronate lyase activity","type":"related"},{"name":"polyguluronate-specific alginate lyase activity","type":"related"}],"termid":"GO:0047491"}


id: GO:1900069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular hyperosmotic salinity response.","definition_xrefs":["PMID:16278455","GOC:TermGenie","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to osmotic stress","termid":"GO:0106049"},{"relation_name":"is_a","term_name":"regulation of response to salt stress","termid":"GO:1901000"},{"relation_name":"regulates","term_name":"cellular hyperosmotic salinity response","termid":"GO:0071475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular hyperosmotic salinity response","synonyms":[{"name":"regulation of cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:1900069"}


id: PBO:0108612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F2, pseudogene","termid":"PBO:0108612"}


id: PBO:0041472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 42","termid":"PBO:0041472"}


id: GO:0004316
data:
  {"annotated_genes":["SJAG_03198","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58355,96924],"is_not":false,"summary":null,"term":"GO:0004316"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl-[acyl-carrier protein] + NADPH + H+.","definition_xrefs":["RHEA:17397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03198":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8862152","EC:1.1.1.100","MetaCyc:3-OXOACYL-ACP-REDUCT-RXN"],"synonyms":[{"name":"(3R)-3-hydroxyacyl-acyl-carrier-protein:NADP+ oxidoreductase activity","type":"related"},{"name":"3-ketoacyl acyl carrier protein reductase activity","type":"related"},{"name":"3-oxoacyl-ACP reductase activity","type":"exact"},{"name":"3-oxoacyl-ACPreductase activity","type":"related"},{"name":"3-oxoacyl-[acyl-carrier protein] reductase activity","type":"exact"},{"name":"3-oxoacyl-acyl-carrier-protein reductase activity","type":"related"},{"name":"NADPH-specific 3-oxoacyl-acylcarrier proteinreductase activity","type":"related"},{"name":"beta-ketoacyl acyl carrier protein (ACP) reductase activity","type":"related"},{"name":"beta-ketoacyl reductase activity","type":"related"},{"name":"beta-ketoacyl thioester reductase activity","type":"related"},{"name":"beta-ketoacyl-ACP reductase activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein reductase activity","type":"related"},{"name":"beta-ketoacyl-acyl-carrier protein(ACP) reductase activity","type":"related"}],"termid":"GO:0004316","terms_by_termid":{"GO:0004316":null}}


id: GO:0061214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the mesonephros over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney smooth muscle tissue development","termid":"GO:0072194"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric smooth muscle tissue development","termid":"GO:0061214"}


id: MONDO:0015214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic visceral malformation (obsolete MONDO:0015214)","secondary_identifiers":["Orphanet:108973"],"termid":"MONDO:0015214","xrefs":{"Monarch":{"xref_id":"0015214"}}}


id: GO:0043526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss.","definition_xrefs":["MSH:D017209","GOC:mtg_apoptosis","PMID:10208444","PMID:11909981","PMID:15905876"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroprotection (obsolete GO:0043526)","secondary_identifiers":["Wikipedia:Neuroprotection"],"synonyms":[{"name":"neuroprotection","type":"exact"}],"termid":"GO:0043526"}


id: GO:0043477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pigment, any general or particular coloring matter in living organisms, resulting in pigment accumulation.","definition_xrefs":["GOC:dph","GOC:jl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process involved in pigment accumulation","termid":"GO:0043475"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment biosynthetic process involved in pigment accumulation","synonyms":[{"name":"pigment biosynthetic process during pigment accumulation","type":"related"}],"termid":"GO:0043477"}


id: MONDO:0005295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A symptom complex characterized by pain and weakness in skeletal muscle group associated with exercise, such as leg pain and weakness brought on by walking. Such muscle limpness disappears after a brief rest and is often relates to arterial stenosis; muscle ischemia; and accumulation of lactate.","definition_xrefs":["MESH:D007383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriosclerosis disorder","termid":"MONDO:0002277"},{"relation_name":"is_a","term_name":"peripheral vascular disease","termid":"MONDO:0005294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermittent vascular claudication","secondary_identifiers":["MEDGEN:7115","SCTID:63491006","UMLS:C0021775","EFO:0003876","ICD9:440.21","DOID:3669"],"synonyms":[{"name":"Charcot's syndrome","type":"exact"},{"name":"intermittent claudication","type":"exact"}],"termid":"MONDO:0005295","xrefs":{"Monarch":{"xref_id":"0005295"}}}


id: PBO:0062316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 1","termid":"PBO:0062316"}


id: PBO:0077733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNS1 antisense RNA 1","termid":"PBO:0077733"}


id: PBO:0079255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 27","termid":"PBO:0079255"}


id: PBO:0089653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 2, Pre8","termid":"PBO:0089653"}


id: GO:0008504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"monoamine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-379393","Reactome:R-HSA-372542","Reactome:R-HSA-5660706","GO:0015201","Reactome:R-HSA-380586","Reactome:R-HSA-380620","Reactome:R-HSA-444160"],"termid":"GO:0008504"}


id: PBO:0067518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 659, pseudogene","termid":"PBO:0067518"}


id: MONDO:0010751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unique green phenomenon","secondary_identifiers":["UMLS:C1839116","OMIM:314380","MEDGEN:326816"],"synonyms":[{"name":"unique green phenomenon","type":"exact"}],"termid":"MONDO:0010751","xrefs":{"Monarch":{"xref_id":"0010751"}}}


id: PBO:0090873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family protein","termid":"PBO:0090873"}


id: MONDO:0022733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choreoacanthocytosis amyotrophic","termid":"MONDO:0022733","xrefs":{"Monarch":{"xref_id":"0022733"}}}


id: GO:0035519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 29 of the ubiquitin monomers, is added to a protein. K29-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:17028573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K29-linked ubiquitination","synonyms":[{"name":"protein K29-linked polyubiquitination","type":"exact"}],"termid":"GO:0035519"}


id: GO:0021759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the globus pallidus over time from its initial formation until its mature state. The globus pallidus is one of the basal ganglia involved with control of voluntary movement in the brain.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","ISBN:0878937420","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"globus pallidus development","synonyms":[{"name":"pallidum development","type":"exact"}],"termid":"GO:0021759"}


id: PBO:0081370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 208","termid":"PBO:0081370"}


id: PBO:0078014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 4","termid":"PBO:0078014"}


id: PBO:0054507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1907","termid":"PBO:0054507"}


id: MONDO:0004064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A uveal melanoma that arises from the iris. It is the most common primary malignant neoplasm of the iris. The majority arise in preexisting nevi.","definition_xrefs":["NCIT:C9088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iris cancer","termid":"MONDO:0002658"},{"relation_name":"is_a","term_name":"uveal melanoma","termid":"MONDO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"iris melanoma","secondary_identifiers":["MONDO:0021433","SCTID:255012009","MEDGEN:87559","DOID:6994","UMLS:C0346373"],"synonyms":[{"name":"iris malignant melanoma","type":"exact"},{"name":"iris melanoma","type":"exact"},{"name":"iris melanoma (disease)","type":"exact"},{"name":"malignant iris melanoma","type":"related"},{"name":"malignant melanoma of iris","type":"exact"},{"name":"malignant melanoma of the iris","type":"exact"},{"name":"melanoma (disease) of iris","type":"exact"},{"name":"melanoma of iris","type":"exact"},{"name":"melanoma of the iris","type":"exact"}],"termid":"MONDO:0004064","xrefs":{"Monarch":{"xref_id":"0004064"}}}


id: MONDO:0018496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic urogenital tract malformation (obsolete MONDO:0015620)","termid":"MONDO:0015620"},{"relation_name":"excluded_subClassOf","term_name":"obsolete ARX-related epileptic encephalopathy (obsolete MONDO:0015921)","termid":"MONDO:0015921"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"name":"obsolete ARX-related encephalopathy-brain malformation spectrum (obsolete MONDO:0018496)","secondary_identifiers":["Orphanet:423655"],"termid":"MONDO:0018496","xrefs":{"Monarch":{"xref_id":"0018496"}}}


id: GO:0032065
data:
  {"annotated_genes":["SJAG_01017","SJAG_00661","SJAG_00030","SJAG_01738","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66699],"is_not":false,"summary":null,"term":"GO:0032065"},{"annotations":[110614,93785,99934,104411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"}]},"cv_name":"biological_process","definition":"A process in which a protein or protein complex is maintained in a specific location in the cell cortex.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01017":null,"SJAG_01738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in cell cortex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"cortical protein anchoring","type":"related"}],"termid":"GO:0032065","terms_by_termid":{"GO:0032065":null,"GO:0097248":null}}


id: PBO:0001882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pho88 family protein (predicted)","termid":"PBO:0001882"}


id: MONDO:0002615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition marked by the development of widespread xanthomas, yellow tumor-like structures filled with lipid deposits. Xanthomas can be found in a variety of tissues including the skin; tendons; joints of knees and elbows. Xanthomatosis is associated with disturbance of lipid metabolism and formation of foam cells.","definition_xrefs":["MESH:D014973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal lipid storage disorder","termid":"MONDO:0019245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"xanthomatosis","secondary_identifiers":["DOID:3345","UMLS:C0043325","HP:0000991","SCTID:63103006","MEDGEN:21939"],"synonyms":[{"name":"xanthelasmatosis","type":"exact"},{"name":"xanthomatosis","type":"exact"},{"name":"xanthomatosis (disease)","type":"exact"}],"termid":"MONDO:0002615","xrefs":{"Monarch":{"xref_id":"0002615"}}}


id: MONDO:0012850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis/osteoporosis, hypophosphatemic","termid":"MONDO:0000079"},{"relation_name":"is_a","term_name":"impaired renal function disease","termid":"MONDO:0001343"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005240"],"is_obsolete":false,"name":"hypophosphatemic nephrolithiasis/osteoporosis 1","secondary_identifiers":["MESH:C567363","DOID:0080077","GARD:18346","MEDGEN:436776","OMIM:612286","UMLS:C2676786"],"synonyms":[{"name":"NPHLOP1","type":"related"},{"name":"hypophosphatemic nephrolithiasis/osteoporosis type 1","type":"exact"},{"name":"nephrolithiasis/osteoporosis, hypophosphatemic, 1","type":"related"},{"name":"nephrolithiasis/osteoporosis, hypophosphatemic, type 1","type":"exact"}],"termid":"MONDO:0012850","xrefs":{"Monarch":{"xref_id":"0012850"}}}


id: MONDO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant spindle cell melanoma (obsolete MONDO:0002530)","termid":"MONDO:0002530","xrefs":{"Monarch":{"xref_id":"0002530"}}}


id: PBO:0002785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Rad1","termid":"PBO:0002785"}


id: PBO:0004187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H Rnh1 (predicted)","termid":"PBO:0004187"}


id: GO:0031570
data:
  {"annotated_genes":["SJAG_03720","SJAG_00429","SJAG_04332","SJAG_02771","SJAG_01205","SJAG_02026","SJAG_02266","SJAG_01010","SJAG_03026","SJAG_01146","SJAG_04280","SJAG_03160","SJAG_04140","SJAG_00486","SJAG_04287","SJAG_02098","SJAG_02563","SJAG_01605","SJAG_04671","SJAG_01680","SJAG_05373","SJAG_00327","SJAG_01708","SJAG_03898","SJAG_01084","SJAG_03927","SJAG_02074","SJAG_03529","SJAG_01044","SJAG_01873","SJAG_00169","SJAG_01429","SJAG_00640","SJAG_00623","SJAG_01677","SJAG_03695","SJAG_01855","SJAG_01076","SJAG_02576","SJAG_03942","SJAG_00364","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[115801,91193,106372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[79792,110947,114212,115974,77770,115748,93332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[100296,70875,72017,91194,106375,93725,111781,116544,116845,98952,99119,115803,117018,74570,78625,79199,109068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[109420,91071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[116759,72015,91557,89974,109069,88880,117454,91195,100297,99121,100807,75019,111476,79062,106376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[111477,78953,91196,99122,111782,94300,90209,106377,88926,79067,115805,88881,73665,100616,107419,78624,74129,102111,95768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and progresses through signal transduction and ends with cell cycle effector processes.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03529":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072401"],"synonyms":[{"name":"DNA integrity checkpoint","type":"exact"},{"name":"signal transduction involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:0031570","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0033315":null,"GO:0044773":null,"GO:0044778":null}}


id: PBO:0055887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit D","termid":"PBO:0055887"}


id: GO:0004343
data:
  {"annotated_genes":["SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70723],"is_not":false,"summary":null,"term":"GO:0004343"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosamine 6-phosphate + acetyl-CoA = N-acetyl-D-glucosamine 6-phosphate + CoA + H+.","definition_xrefs":["RHEA:10292","EC:2.3.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glucosamine 6-phosphate N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02058","MetaCyc:GLUCOSAMINEPNACETYLTRANS-RXN","Reactome:R-HSA-449734"],"synonyms":[{"name":"D-glucosamine-6-P N-acetyltransferase activity","type":"related"},{"name":"N-acetylglucosamine-6-phosphate synthase activity","type":"related"},{"name":"acetyl-CoA:D-glucosamine-6-phosphate N-acetyltransferase activity","type":"related"},{"name":"aminodeoxyglucosephosphate acetyltransferase activity","type":"related"},{"name":"glucosamine 6-phosphate acetylase activity","type":"related"},{"name":"glucosamine-6-phosphate acetylase activity","type":"related"},{"name":"glucosamine-phosphate N-acetyltransferase activity","type":"exact"},{"name":"phosphoglucosamine N-acetylase activity","type":"related"},{"name":"phosphoglucosamine acetylase activity","type":"related"},{"name":"phosphoglucosamine transacetylase activity","type":"related"}],"termid":"GO:0004343","terms_by_termid":{"GO:0004343":null}}


id: PBO:0086281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a potential role in tethering ER and vacuoles; localizes to nucleus-vacuole junctions in an Mdm1p-dependent manner; contains a lipid-binding PXA domain","termid":"PBO:0086281"}


id: PBO:0027104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription_at_tDNA","termid":"PBO:0027104"}


id: PBO:0012245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor protein BolA domain (predicted)","termid":"PBO:0012245"}


id: PBO:0031531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oxidoreductase_activity","termid":"PBO:0031531"}


id: PBO:0053550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 557","termid":"PBO:0053550"}


id: MONDO:0017986
data:
  {"annotated_genes":["SJAG_00326","SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008972"},{"annotations":[85662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014743"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"disorder of plasmalogens biosynthesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842510","NANDO:1200770","UMLS:C5681192","GARD:18790","Orphanet:3276"],"synonyms":[{"name":"disorder of plasmalogens biosynthesis","type":"exact"}],"termid":"MONDO:0017986","terms_by_termid":{"MONDO:0008972":null,"MONDO:0014743":null},"xrefs":{"Monarch":{"xref_id":"0017986"}}}


id: GO:0032702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-19 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-19 production","termid":"GO:0032662"},{"relation_name":"negatively_regulates","term_name":"interleukin-19 production","termid":"GO:0032622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-19 production","secondary_identifiers":["GO:0045385"],"synonyms":[{"name":"down regulation of interleukin-19 production","type":"exact"},{"name":"down-regulation of interleukin-19 production","type":"exact"},{"name":"downregulation of interleukin-19 production","type":"exact"},{"name":"inhibition of interleukin-19 production","type":"narrow"},{"name":"negative regulation of IL-19 production","type":"exact"},{"name":"negative regulation of interleukin-19 biosynthetic process","type":"narrow"}],"termid":"GO:0032702"}


id: PBO:0110416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 6","termid":"PBO:0110416"}


id: PBO:0060292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6B pseudogene 1","termid":"PBO:0060292"}


id: PBO:0031684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peroxisome_degradation","termid":"PBO:0031684"}


id: MONDO:0002895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dentinogenesis imperfecta (obsolete MONDO:0002895)","termid":"MONDO:0002895","xrefs":{"Monarch":{"xref_id":"0002895"}}}


id: MONDO:0009967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive osteopetrosis 3","termid":"MONDO:0009818"},{"relation_name":"is_a","term_name":"renal tubular acidosis","termid":"MONDO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"renal tubular acidosis 3","secondary_identifiers":["GARD:15228","MEDGEN:336601","UMLS:C1849435","MESH:C537759","OMIM:267200"],"synonyms":[{"name":"RTA, bicarbonate-wasting type","type":"exact"},{"name":"RTA, dislocation type","type":"exact"},{"name":"bicarbonate-wasting RTA","type":"related"},{"name":"renal tubular acidosis 3","type":"exact"},{"name":"renal tubular acidosis III","type":"exact"},{"name":"renal tubular acidosis, distal, type 3","type":"related"}],"termid":"MONDO:0009967","xrefs":{"Monarch":{"xref_id":"0009967"}}}


id: MONDO:0021488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the lacrimal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal gland neoplasm","termid":"MONDO:0021222"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of lacrimal gland","secondary_identifiers":["NCIT:C3621","icd11.foundation:1163790602","SCTID:92169007","MEDGEN:57813","UMLS:C0154024","ICD9:224.2"],"synonyms":[{"name":"benign lacrimal gland neoplasm","type":"exact"},{"name":"benign lacrimal gland tumor","type":"exact"},{"name":"benign lacrimal gland tumour","type":"exact"},{"name":"benign neoplasm of the lacrimal gland","type":"exact"},{"name":"benign tumor of lacrimal gland","type":"exact"},{"name":"benign tumor of the lacrimal gland","type":"exact"},{"name":"benign tumour of lacrimal gland","type":"exact"},{"name":"benign tumour of the lacrimal gland","type":"exact"},{"name":"lacrimal gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021488","xrefs":{"Monarch":{"xref_id":"0021488"}}}


id: GO:0097117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering process in which guanylate kinase-associated proteins (GKAPs) are localized to distinct domains in the cell membrane. GKAP facilitates assembly of the post synaptic density of neurons.","definition_xrefs":["GOC:sjp","GOC:BHF","PMID:15620359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"part_of","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"guanylate kinase-associated protein clustering","synonyms":[{"name":"GKAP clustering","type":"exact"}],"termid":"GO:0097117"}


id: GO:0005572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcribed untranslated RNA (obsolete GO:0005572)","synonyms":[{"name":"RNA polymerase II transcribed untranslated RNA","type":"exact"}],"termid":"GO:0005572"}


id: PBO:0000078
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent orthologs","termid":"PBO:0000078"}


id: PBO:0116653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2 binding protein pseudogene 8","termid":"PBO:0116653"}


id: GO:0010749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of nitric oxide mediated signal transduction. Nitric oxide mediated signal transduction is The series of molecular signals mediated by the detection of nitric oxide (NO).","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"nitric oxide mediated signal transduction","termid":"GO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nitric oxide mediated signal transduction","synonyms":[{"name":"regulation of nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0010749"}


id: PBO:0075905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8SIA5 divergent transcript","termid":"PBO:0075905"}


id: GO:0030557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in a tRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA binding","termid":"GO:0000049"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"tRNA modification guide activity","termid":"GO:0030557"}


id: PBO:0082358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor with a role in degradation of the ER and nucleus; involved specifically in autophagy of perinuclear endoplasmic reticulum in response to nitrogen starvation or rapamycin treatment; localizes to the perinuclear ER","termid":"PBO:0082358"}


id: PBO:0077729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18 pseudogene 1","termid":"PBO:0077729"}


id: PBO:0043127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 interacting BAR domain containing 1","termid":"PBO:0043127"}


id: GO:0048209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or destination of vesicle-mediated transport to, from or within the Golgi apparatus.","definition_xrefs":["PMID:10219233","GOC:mah","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle targeting, to, from or within Golgi","synonyms":[{"name":"regulation of Golgi vesicle targeting","type":"exact"}],"termid":"GO:0048209"}


id: PBO:0053224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat LGI family member 4","termid":"PBO:0053224"}


id: GO:0001703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gastrulation process in which the initial invagination becomes the mouth and the anus forms second.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation with mouth forming first","synonyms":[{"name":"protostomic gastrulation","type":"narrow"}],"termid":"GO:0001703"}


id: PBO:0002608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Hca4 (predicted)","termid":"PBO:0002608"}


id: PBO:0036455
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ8","termid":"PBO:0036455"}


id: PBO:0043675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 1C","termid":"PBO:0043675"}


id: PBO:0068184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 491","termid":"PBO:0068184"}


id: PR:Q9Y7L7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol N-acetylglucosaminyltransferase subunit H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15231:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase subunit gpi15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.05","secondary_identifiers":["UniProtKB:Q9Y7L7"],"synonyms":[{"name":"PIGH homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC685.05","type":"related"},{"name":"Spom972h-PIGH","type":"exact"}],"termid":"PR:Q9Y7L7"}


id: PBO:0034499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere_assembly","termid":"PBO:0034499"}


id: PBO:0057205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 375","termid":"PBO:0057205"}


id: PBO:0040434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP8A1 divergent transcript","termid":"PBO:0040434"}


id: PBO:0059806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 32","termid":"PBO:0059806"}


id: PBO:0034382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_many_to_many_orthology_relationship_with","termid":"PBO:0034382"}


id: PBO:0077303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 42","termid":"PBO:0077303"}


id: FYPO:0000014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"tapered cell","synonyms":[{"name":"bottle-shaped cell","type":"exact"},{"name":"cell morphology, bottle/skittle","type":"exact"},{"name":"skittle-shaped cell","type":"exact"}],"termid":"FYPO:0000014"}


id: GO:0038055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a member of the BMP family of proteins from a cell.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"BMP secretion","synonyms":[{"name":"BMP protein secretion","type":"exact"},{"name":"bone morphogenetic protein secretion","type":"exact"}],"termid":"GO:0038055"}


id: PBO:0003505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Tsr2 (predicted)","termid":"PBO:0003505"}


id: PBO:0043070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 4","termid":"PBO:0043070"}


id: PBO:0117372
data:
  {"annotated_genes":["SJAG_MIT09","SJAG_MIT37","SJAG_MIT15"],"annotation_feature_type":"gene","cv_annotations":{"EC numbers":[{"annotations":[56229,56237,56261],"is_not":false,"summary":null,"term":"PBO:0117372"}]},"cv_name":"EC numbers","gene_count":3,"genes_by_uniquename":{"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"is_obsolete":false,"name":"3.6.1.34","termid":"PBO:0117372","terms_by_termid":{"PBO:0117372":null}}


id: PR:Q9UTE9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11038:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.03c","secondary_identifiers":["UniProtKB:Q9UTE9"],"synonyms":[{"name":"SPAC222.03c","type":"related"},{"name":"Spom972h-TIMM10","type":"exact"}],"termid":"PR:Q9UTE9"}


id: PBO:0045676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 2 heavy chain 1","termid":"PBO:0045676"}


id: PBO:0084209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeodomain-containing transcriptional repressor; regulates expression of PTR2, which encodes a major peptide transporter; imported peptides activate ubiquitin-dependent proteolysis, resulting in degradation of Cup9p and de-repression of PTR2 transcription; CUP9 has a paralog, TOS8, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0084209"}


id: GO:0008354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell specialized to produce haploid gametes through the embryo from its site of production to the place where the gonads will form.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell migration","synonyms":[{"name":"germ-cell migration","type":"exact"},{"name":"pole cell migration","type":"narrow"},{"name":"primordial germ cell migration","type":"related"}],"termid":"GO:0008354"}


id: PBO:0070852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 5","termid":"PBO:0070852"}


id: FYPO:0006649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which 5'-3' DNA/RNA helicase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 5'-3' DNA/RNA helicase activity","termid":"FYPO:0006647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished 5'-3' DNA/RNA helicase activity","synonyms":[{"name":"5'-3' DNA/RNA helicase activity abolished","type":"exact"}],"termid":"FYPO:0006649"}


id: GO:0052462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont phagocytosis (obsolete GO:0052462)","termid":"GO:0052462"}


id: PBO:0041788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPZA1 pseudogene 1","termid":"PBO:0041788"}


id: MONDO:0001479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually mild form of diphtheria characterized by infection of the skin by corynebacterium diphtheria and the resulting formation of a chronic, shallow ulcer that is sometimes bordered or followed by a bulla.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma","termid":"MONDO:0002922"},{"relation_name":"is_a","term_name":"diphtheria","termid":"MONDO:0005504"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous diphtheria","secondary_identifiers":["ICD9:032.85","ICD10CM:A36.3","NCIT:C34544","SCTID:18901009","icd11.foundation:618920860","MEDGEN:41599","UMLS:C0012555","DOID:12275"],"synonyms":[{"name":"cutaneous diphtheria","type":"exact"}],"termid":"MONDO:0001479","xrefs":{"Monarch":{"xref_id":"0001479"}}}


id: PBO:0064943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protease associated domain containing 1 pseudogene 1","termid":"PBO:0064943"}


id: MONDO:1010921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myositis ossificans that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis ossificans, non-human animal","termid":"MONDO:1010197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myositis ossificans, cattle","secondary_identifiers":["OMIA:000697-9913"],"termid":"MONDO:1010921","xrefs":{"Monarch":{"xref_id":"1010921"}}}


id: PBO:0034562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maintenance_of_protein_location_at_growing_cell_tip","termid":"PBO:0034562"}


id: FYPO:0004284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of oxanine DNA N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal oxanine DNA N-glycosylase activity","termid":"FYPO:0004283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased oxanine DNA N-glycosylase activity","synonyms":[{"name":"reduced oxanine DNA N-glycosylase activity","type":"exact"}],"termid":"FYPO:0004284"}


id: GO:0005791
data:
  {"annotated_genes":["SJAG_00064","SJAG_02208","SJAG_00360","SJAG_02588","SJAG_03955","SJAG_01558","SJAG_02330","SJAG_02354","SJAG_00175","SJAG_00959"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97802,63679,109086,105928],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005784"},{"annotations":[69694,90346,72967,95491],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"},{"annotations":[68704,94038],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005785"},{"annotations":[97803,108062],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071261"}]},"cv_name":"cellular_component","definition":"The rough (or granular) endoplasmic reticulum (ER) has ribosomes adhering to the outer surface; the ribosomes are the site of translation of the mRNA for those proteins which are either to be retained within the cisternae (ER-resident proteins), the proteins of the lysosomes, or the proteins destined for export from the cell. Glycoproteins undergo their initial glycosylation within the cisternae.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00360":null,"SJAG_00959":null,"SJAG_01558":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"rough endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Endoplasmic_reticulum#Rough_endoplasmic_reticulum","NIF_Subcellular:sao1881364067"],"synonyms":[{"name":"RER","type":"exact"},{"name":"rough ER","type":"exact"}],"termid":"GO:0005791","terms_by_termid":{"GO:0005784":null,"GO:0005785":null,"GO:0031207":null,"GO:0071261":null}}


id: FYPO:0007093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs transcribed from genes encoding ribosomal proteins measured in a cell is higher than normal (i.e. higher than observed in wild-type cells).","definition_xrefs":["PomBase:mah","PMID:28388826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased level of ribosomal protein gene mRNA during vegetative growth","synonyms":[{"name":"increased level of ribosomal protein gene RNA during vegetative growth","type":"exact"},{"name":"increased level of ribosomal protein gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of ribosomal protein gene transcripts during vegetative growth","type":"exact"},{"name":"increased ribosomal protein gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0007093"}


id: PBO:0031341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_methyl_methanesulfonate","termid":"PBO:0031341"}


id: GO:0006244
data:
  {"annotated_genes":["SJAG_04487","SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[76058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03676":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine nucleotide breakdown","type":"exact"},{"name":"pyrimidine nucleotide catabolism","type":"exact"},{"name":"pyrimidine nucleotide degradation","type":"exact"}],"termid":"GO:0006244","terms_by_termid":{"GO:0006256":null,"GO:0046081":null}}


id: PATO:0001086
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001086 efficiency value (obsolete PATO:0001086)","termid":"PATO:0001086"}


id: MONDO:0021512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the thymus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"immune system organ benign neoplasm","termid":"MONDO:0000630"},{"relation_name":"is_a","term_name":"thymus neoplasm","termid":"MONDO:0005197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"benign neoplasm of thymus","secondary_identifiers":["ICD9:212.6","SCTID:92437008","ICD10CM:D15.0","UMLS:C0345975","MEDGEN:87526","icd11.foundation:1583331018","NCIT:C4458"],"synonyms":[{"name":"benign Thymus neoplasm","type":"exact"},{"name":"benign Thymus tumor","type":"exact"},{"name":"benign Thymus tumour","type":"exact"},{"name":"benign neoplasm of the Thymus","type":"exact"},{"name":"benign thymic neoplasm","type":"exact"},{"name":"benign thymic tumor","type":"exact"},{"name":"benign thymic tumour","type":"exact"},{"name":"benign tumor of Thymus","type":"exact"},{"name":"benign tumor of the Thymus","type":"exact"},{"name":"benign tumour of Thymus","type":"exact"},{"name":"benign tumour of the Thymus","type":"exact"},{"name":"thymus benign neoplasm","type":"exact"}],"termid":"MONDO:0021512","xrefs":{"Monarch":{"xref_id":"0021512"}}}


id: GO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the androgen receptor signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"regulates","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of androgen receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-5625886"],"synonyms":[{"name":"regulation of androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060765"}


id: PBO:0070421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoid isomerohydrolase RPE65","termid":"PBO:0070421"}


id: GO:0003775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal motor activity (obsolete GO:0003775)","synonyms":[{"name":"axonemal motor activity","type":"exact"}],"termid":"GO:0003775"}


id: PBO:0080792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPC complex subunit, DNA damage recognition and repair factor","termid":"PBO:0080792"}


id: GO:0002579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation","synonyms":[{"name":"activation of antigen processing and presentation","type":"narrow"},{"name":"stimulation of antigen processing and presentation","type":"narrow"},{"name":"up regulation of antigen processing and presentation","type":"exact"},{"name":"up-regulation of antigen processing and presentation","type":"exact"},{"name":"upregulation of antigen processing and presentation","type":"exact"}],"termid":"GO:0002579"}


id: GO:0097183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor XI (F11); formation of the complex inhibits the serine protease activity of coagulation factor XI.","definition_xrefs":["PMID:2844223","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-coagulation factor XI complex","synonyms":[{"name":"PCI-coagulation factor XI complex","type":"exact"},{"name":"SERPINA5-coagulation factor XI complex","type":"exact"},{"name":"plasma serine protease inhibitor-coagulation factor XI complex","type":"exact"},{"name":"protein C inhibitor-F11 complex","type":"exact"},{"name":"serpin A5-coagulation factor XI complex","type":"exact"}],"termid":"GO:0097183"}


id: MONDO:1012907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy due to abnormal glycosylation of α-dystroglycan that occurs in dogs due to a mutation in the LARGE1 gene.","definition_xrefs":["PMID:34654610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy, LARGE1-related, dog","secondary_identifiers":["OMIA:002460-9615"],"termid":"MONDO:1012907","xrefs":{"Monarch":{"xref_id":"1012907"}}}


id: GO:0150015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dendrite of the dendritic tree, which emerges near the apical pole of a neuron, and which is the closest to the cell body of the neuron (the soma).","definition_xrefs":["GOC:aruk","GOC:bc","PMID:1720142","PMID:16899232","PMID:9214543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical dendrite","termid":"GO:0097440"},{"relation_name":"is_a","term_name":"proximal dendrite","termid":"GO:1990635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical proximal dendrite","termid":"GO:0150015"}


id: FYPO:0004195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the telomere of a chromosome is normal (i.e. indistinguishable from wild type) during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to telomere during meiosis","synonyms":[{"name":"normal protein localisation to chromosome, telomeric region, during meiosis","type":"exact"},{"name":"normal protein localisation to telomere during meiosis","type":"exact"},{"name":"normal protein localization to chromosome, telomeric region, during meiosis","type":"exact"},{"name":"normal protein localization to telomere during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004195"}


id: PBO:0062861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthopedia homeobox","termid":"PBO:0062861"}


id: PBO:0066135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoprotein, PTB binding 2","termid":"PBO:0066135"}


id: PBO:0087079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L41A; comprises only 25 amino acids; rpl41a rpl41b double null mutant is viable; homologous to mammalian ribosomal protein L41, no bacterial homolog; RPL41A has a paralog, RPL41B, that arose from the whole genome duplication","termid":"PBO:0087079"}


id: GO:0061371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the heart with respect to the left and right halves of the organism.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of heart left/right asymmetry","synonyms":[{"name":"determination of cardiac left/right asymmetry","type":"exact"}],"termid":"GO:0061371"}


id: GO:0006164
data:
  {"annotated_genes":["SJAG_02850","SJAG_MIT15","SJAG_00044","SJAG_04122","SJAG_00133","SJAG_04422","SJAG_02564","SJAG_01298","SJAG_00542","SJAG_02105","SJAG_05204","SJAG_01661","SJAG_MIT09","SJAG_01081","SJAG_00836","SJAG_00964","SJAG_04123","SJAG_04693","SJAG_04634","SJAG_02364","SJAG_02889","SJAG_06634","SJAG_01070","SJAG_02038","SJAG_03946","SJAG_04849","SJAG_01566","SJAG_04681","SJAG_04882","SJAG_04970","SJAG_01814","SJAG_01500","SJAG_03298","SJAG_01471","SJAG_02598","SJAG_01859","SJAG_02887","SJAG_03811","SJAG_00438","SJAG_MIT37","SJAG_00985","SJAG_01582","SJAG_07003","SJAG_00915","SJAG_02618","SJAG_03114","SJAG_03925","SJAG_03140","SJAG_03355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72211,73498,97468],"is_not":false,"summary":null,"term":"GO:0006164"},{"annotations":[78646,76578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[69584,59954,64234,71277,76565,57111,65190,57974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[71713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[73703,57103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[59402,63110,74541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[75238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[101991,64499,74818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[75239,64560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[70483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[77261,74415,112832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[79910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[77712,79636,70863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[117745],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[67175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[107654,92618,103434,107562,93632,103405,101571,104771,118801,118807,93050,94602,118812,102787,115588,108543,88889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[75240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic 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nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:DENOVOPURINE2-PWY"],"synonyms":[{"name":"purine nucleotide anabolism","type":"exact"},{"name":"purine nucleotide biosynthesis","type":"exact"},{"name":"purine nucleotide formation","type":"exact"},{"name":"purine nucleotide synthesis","type":"exact"}],"termid":"GO:0006164","terms_by_termid":{"GO:0006164":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0006741":null,"GO:0009435":null,"GO:0015986":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0034356":null,"GO:0042776":null,"GO:0044208":null,"GO:0044209":null,"GO:1905707":null}}


id: PBO:0055244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2671","termid":"PBO:0055244"}


id: GO:0050527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + poly[(R)-3-hydroxyoctanoate](n) = poly[(R)-3-hydroxyoctanoate](x) + poly[(R)-3-hydroxyoctanoate](n-x); x is 1-5.","definition_xrefs":["MetaCyc:3.1.1.76-RXN","EC:3.1.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"poly(3-hydroxyoctanoate) depolymerase activity","synonyms":[{"name":"PHA depolymerase activity","type":"broad"},{"name":"PHO depolymerase activity","type":"related"},{"name":"poly((R)-3-hydroxyoctanoate) hydrolase activity","type":"related"},{"name":"poly((R)-hydroxyalkanoic acid) depolymerase activity","type":"broad"},{"name":"poly(3HO) depolymerase activity","type":"related"},{"name":"poly(HA(MCL)) depolymerase activity","type":"related"},{"name":"poly(HA) depolymerase activity","type":"broad"},{"name":"poly(HAMCL) depolymerase activity","type":"related"},{"name":"poly[(R)-3-hydroxyoctanoate] hydrolase activity","type":"related"},{"name":"poly[(R)-hydroxyalkanoic acid] depolymerase","type":"broad"},{"name":"poly{oxycarbonyl[(R)-2-pentylethylene]} hydrolase activity","type":"related"}],"termid":"GO:0050527"}


id: GO:0015447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type II protein secretor activity (obsolete GO:0015447)","synonyms":[{"name":"type II protein secretor activity","type":"exact"}],"termid":"GO:0015447"}


id: GO:0045248
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cytosolic complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2).","definition_xrefs":["GOC:mtg_sensu","PMID:10848975"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic oxoglutarate dehydrogenase complex (obsolete GO:0045248)","termid":"GO:0045248"}


id: MONDO:0012283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, midfacial hypoplasia, triangular facies, and sensorineural hearing loss","secondary_identifiers":["MEDGEN:324442","UMLS:C1836120","MESH:C536427","OMIM:609466"],"synonyms":[{"name":"cleft palate, midfacial hypoplasia, triangular facies, and sensorineural hearing loss","type":"exact"}],"termid":"MONDO:0012283","xrefs":{"Monarch":{"xref_id":"0012283"}}}


id: PBO:0042726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein C pseudogene 1","termid":"PBO:0042726"}


id: GO:0038162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by erythropoietin (EPO) binding to the erythropoietin receptor (EPO-R) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","PMID:12489509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to erythropoietin","termid":"GO:0036018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"erythropoietin-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9006335"],"synonyms":[{"name":"EPO-R signaling pathway","type":"exact"},{"name":"erythropoietin receptor signaling pathway","type":"exact"}],"termid":"GO:0038162"}


id: MONDO:0018068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 13 is a chromosomal anomaly caused by the presence of an extra chromosome 13 and is characterized by brain malformations (holoprosencephaly), facial dysmorphism, ocular anomalies, postaxial polydactyly, visceral malformations (cardiopathy) and severe psychomotor retardation.","definition_xrefs":["Orphanet:3378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"},{"relation_name":"is_a","term_name":"chromosome 13 disorder","termid":"MONDO:0700020"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"trisomy 13","secondary_identifiers":["NANDO:2200964","UMLS:C0152095","icd11.foundation:1435958084","MedDRA:10044686","MEDGEN:56261","ICD9:758.1","NORD:1796","MESH:C536305","DOID:11665","NCIT:C101223","GARD:7341","NCIT:C36529","SCTID:21111006"],"synonyms":[{"name":"D trisomy syndrome (formerly)","type":"related"},{"name":"D1 trisomy","type":"related"},{"name":"Patau syndrome","type":"exact"},{"name":"Patau's syndrome","type":"exact"},{"name":"Trisomy 13 Syndrome","type":"exact"},{"name":"chromosome 13, trisomy 13 complete","type":"related"},{"name":"trisomy 13","type":"exact"},{"name":"trisomy type 13","type":"exact"}],"termid":"MONDO:0018068","xrefs":{"Monarch":{"xref_id":"0018068"}}}


id: PBO:0076816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 3","termid":"PBO:0076816"}


id: MONDO:0015113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare vascular liver disease (obsolete MONDO:0015113)","secondary_identifiers":["Orphanet:101938"],"termid":"MONDO:0015113","xrefs":{"Monarch":{"xref_id":"0015113"}}}


id: FYPO:0003244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mRNA splicing via the spliceosome takes place normally for some, but is decreased for other, specific introns.","definition_xrefs":["PMID:23754748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome","termid":"FYPO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased mRNA splicing, via spliceosome, intron-specific","synonyms":[{"name":"differential pre-mRNA splicing defects","type":"exact"},{"name":"intron-specific abnormal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"intron-specific abnormal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"intron-specific abnormal nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"intron-specific mRNA splicing defects","type":"exact"}],"termid":"FYPO:0003244"}


id: PBO:0084432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; encoded within the complex locus MAL4","termid":"PBO:0084432"}


id: GO:0019741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"},{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pentacyclic triterpenoid catabolic process","synonyms":[{"name":"pentacyclic triterpenoid breakdown","type":"exact"},{"name":"pentacyclic triterpenoid catabolism","type":"exact"},{"name":"pentacyclic triterpenoid degradation","type":"exact"}],"termid":"GO:0019741"}


id: PBO:0059446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A19, pseudogene","termid":"PBO:0059446"}


id: GO:0033019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxyvalerate + NAD+ = 5-oxovalerate + NADH.","definition_xrefs":["PMID:12406764","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"5-hydroxyvalerate dehydrogenase activity","termid":"GO:0033019"}


id: GO:0070240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of activated T cell autonomous cell death.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated T cell autonomous cell death","termid":"GO:0070239"},{"relation_name":"negatively_regulates","term_name":"activated T cell autonomous cell death","termid":"GO:0070238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated T cell autonomous cell death","synonyms":[{"name":"down regulation of activated T cell autonomous cell death","type":"exact"},{"name":"down-regulation of activated T cell autonomous cell death","type":"exact"},{"name":"downregulation of activated T cell autonomous cell death","type":"exact"},{"name":"inhibition of activated T cell autonomous cell death","type":"narrow"},{"name":"negative regulation of ACAD","type":"broad"},{"name":"negative regulation of activated T cell apoptosis","type":"broad"},{"name":"negative regulation of activated T lymphocyte autonomous cell death","type":"exact"},{"name":"negative regulation of activated T-cell autonomous cell death","type":"exact"},{"name":"negative regulation of activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"negative regulation of activated cell autonomous cell death","type":"broad"}],"termid":"GO:0070240"}


id: GO:1903483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of mitotic actomyosin contractile ring localization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of mitotic actomyosin contractile ring localization (obsolete GO:1903483)","synonyms":[{"name":"regulation of cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"regulation of maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"regulation of maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"regulation of maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903483"}


id: PBO:0017771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nramp family manganese ion transmembrane transporter","termid":"PBO:0017771"}


id: MONDO:0859156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"dysostosis multiplex, Ain-Naz type","secondary_identifiers":["OMIM:619345","UMLS:C5444223","MEDGEN:1780944"],"termid":"MONDO:0859156","xrefs":{"Monarch":{"xref_id":"0859156"}}}


id: MONDO:0013553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency-centromeric instability-facial anomalies syndrome in which the cause of the disease is a mutation in the ZBTB24 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency-centromeric instability-facial anomalies syndrome","termid":"MONDO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 2","secondary_identifiers":["DOID:0090009","MEDGEN:481378","OMIM:614069","UMLS:C3279748","GARD:15751"],"synonyms":[{"name":"ICF syndrome 2","type":"exact"},{"name":"ICF2","type":"related"},{"name":"ZBTB24 immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome type 2","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 2","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome caused by mutation in ZBTB24","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome type 2","type":"exact"}],"termid":"MONDO:0013553","xrefs":{"Monarch":{"xref_id":"0013553"}}}


id: GO:2000405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T cell migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte migration","termid":"GO:2000402"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"negatively_regulates","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell migration","synonyms":[{"name":"negative regulation of T lymphocyte migration","type":"exact"},{"name":"negative regulation of T-cell migration","type":"exact"},{"name":"negative regulation of T-lymphocyte migration","type":"exact"}],"termid":"GO:2000405"}


id: GO:0009714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chalcones, phenyl steryl ketone or its hydroxylated derivatives.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"chalcone metabolic process","synonyms":[{"name":"chalcone metabolism","type":"exact"}],"termid":"GO:0009714"}


id: PBO:0080380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS11 divergent transcript","termid":"PBO:0080380"}


id: MONDO:0009327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart, malformation of","secondary_identifiers":["OMIM:140500","OMIM:234750"],"synonyms":[{"name":"heart, malformation of","type":"exact"}],"termid":"MONDO:0009327","xrefs":{"Monarch":{"xref_id":"0009327"}}}


id: PBO:0064232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCH1 antisense RNA 2","termid":"PBO:0064232"}


id: MONDO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete basal ganglia calcification, idiopathic (obsolete MONDO:0000109)","termid":"MONDO:0000109","xrefs":{"Monarch":{"xref_id":"0000109"}}}


id: PATO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edge shape","termid":"PATO:0002267"}


id: PBO:0044021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 3","termid":"PBO:0044021"}


id: FYPO:0000256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mutations occur at a higher frequency than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mutation rate","termid":"FYPO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mutator","synonyms":[{"name":"increased mutation rate","type":"exact"},{"name":"mutator during mitotic cell cycle","type":"related"},{"name":"mutator during vegetative growth","type":"exact"}],"termid":"FYPO:0000256"}


id: MONDO:0033550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete high density lipoprotein cholesterol level quantitative trait locus 7 (obsolete MONDO:0033550)","secondary_identifiers":["OMIM:618979"],"synonyms":[{"name":"HDLCQ7","type":"related"},{"name":"HIGH DENSITY LIPOPROTEIN CHOLESTEROL LEVEL QUANTITATIVE TRAIT LOCUS 7","type":"related"}],"termid":"MONDO:0033550","xrefs":{"Monarch":{"xref_id":"0033550"}}}


id: GO:0050552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (4S)-limonene + diphosphate.","definition_xrefs":["EC:4.2.3.16","MetaCyc:4.2.3.16-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"(4S)-limonene synthase activity","secondary_identifiers":["RHEA:12869"],"synonyms":[{"name":"(-)-(4S)-limonene synthase activity","type":"exact"},{"name":"4S-(-)-limonene synthase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-(4S)-limonene-forming]","type":"related"},{"name":"geranyldiphosphate diphosphate lyase (limonene forming)","type":"related"},{"name":"geranyldiphosphate diphosphate lyase [cyclizing, (4S)-limonene-forming]","type":"related"}],"termid":"GO:0050552"}


id: MONDO:0025457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious, neoplastic, pulmonary disease of sheep characterized by hyperplasia and hypertrophy of pneumocytes and epithelial cells of the lung. It is caused by jaagsiekte sheep retrovirus.","definition_xrefs":["MESH:D011648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary adenomatosis, ovine","synonyms":[{"name":"Adenomatoses, Ovine pulmonary","type":"related"},{"name":"Adenomatoses, pulmonary Ovine","type":"related"},{"name":"Jaagsiekte","type":"related"},{"name":"Ovine Adenomatoses, pulmonary","type":"related"},{"name":"Ovine adenomatosis, pulmonary","type":"related"},{"name":"Ovine pulmonary Adenomatoses","type":"related"},{"name":"Ovine pulmonary adenomatosis","type":"related"},{"name":"Ovine pulmonary carcinoma","type":"related"},{"name":"Ovine pulmonary carcinomas","type":"related"},{"name":"adenomatosis, Ovine pulmonary","type":"related"},{"name":"adenomatosis, pulmonary Ovine","type":"related"},{"name":"adenomatosis, pulmonary, Ovine","type":"related"},{"name":"carcinoma, Ovine pulmonary","type":"related"},{"name":"carcinomas, Ovine pulmonary","type":"related"},{"name":"pulmonary Adenomatoses, Ovine","type":"related"},{"name":"pulmonary Ovine Adenomatoses","type":"related"},{"name":"pulmonary Ovine adenomatosis","type":"related"},{"name":"pulmonary carcinoma, Ovine","type":"related"},{"name":"pulmonary carcinomas, Ovine","type":"related"}],"termid":"MONDO:0025457","xrefs":{"Monarch":{"xref_id":"0025457"}}}


id: GO:0003082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which angiotensin directly increases the rate of natriuresis and diuresis in the kidney.","definition_xrefs":["GOC:dph","GOC:mtg_cardio","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of renal output by angiotensin (obsolete GO:0003082)","synonyms":[{"name":"angiotensin mediated positive regulation of renal output","type":"exact"},{"name":"angiotensin-mediated positive regulation of renal output","type":"exact"},{"name":"positive regulation of renal output by angiotensin","type":"exact"}],"termid":"GO:0003082"}


id: MONDO:0001456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral retinal degeneration","termid":"MONDO:0001451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cobblestone retinal degeneration","secondary_identifiers":["DOID:12166","ICD9:362.61","UMLS:C0154854","MEDGEN:509685","SCTID:69134001"],"synonyms":[{"name":"paving stone degeneration of retina","type":"exact"},{"name":"paving stone retinal degeneration","type":"exact"}],"termid":"MONDO:0001456","xrefs":{"Monarch":{"xref_id":"0001456"}}}


id: GO:0033179
data:
  {"annotated_genes":["SJAG_02782","SJAG_05294","SJAG_03406","SJAG_02023","SJAG_00516","SJAG_01913","SJAG_03962"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91814,95407,103662,95588,99702,61800,89922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring.","definition_xrefs":["GOC:mah","PMID:16449553","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, proton-transporting domain","termid":"GO:0033177"},{"relation_name":"part_of","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03962":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting V-type ATPase, V0 domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0033179","terms_by_termid":{"GO:0000220":null}}


id: MONDO:0011964
data:
  {"annotated_genes":["SJAG_00924"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84816],"is_not":false,"summary":null,"term":"MONDO:0011964"}]},"cv_name":"mondo","definition":"DPAGT1-CDG is a form of congenital disorders of N-linked glycosylation characterized by hypotonia, intractable seizures, developmental delay, microcephaly and severe fetal hypokinesia. Additional features that may be observed include apnea and respiratory deficiency, cataracts, joint contractures, vermian hypoplasia, dysmorphic features (esotropia, arched palate, micrognathia, finger clinodactyly, single flexion creases) and feeding difficulties. The disease is caused by loss-of-function mutations in the gene DPAGT1 (11q23.3).","definition_xrefs":["Orphanet:86309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00924":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"DPAGT1-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C126874","DOID:0080562","SCTID:725079003","UMLS:C2931004","OMIM:608093","MESH:C535748","MEDGEN:419694","GARD:9837"],"synonyms":[{"name":"CDG 1J","type":"related"},{"name":"CDG Ij","type":"related"},{"name":"CDG syndrome type Ij","type":"exact"},{"name":"CDG-Ij","type":"exact"},{"name":"CDG1J","type":"exact"},{"name":"CDGIj","type":"exact"},{"name":"DPAGT1-CDG","type":"exact"},{"name":"DPAGT1-CDG (CDG-Ij)","type":"related"},{"name":"DPAGT1-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ij","type":"exact"},{"name":"congenital disorder of glycosylation type 1j","type":"exact"},{"name":"congenital disorder of glycosylation type Ij","type":"exact"},{"name":"congenital disorder of glycosylation, type Ij","type":"related"},{"name":"dolichyl-phosphate N-acetylgalactosamine phosphotransferase deficiency","type":"exact"}],"termid":"MONDO:0011964","terms_by_termid":{"MONDO:0011964":null},"xrefs":{"Monarch":{"xref_id":"0011964"}}}


id: GO:0000993
data:
  {"annotated_genes":["SJAG_01151","SJAG_03118","SJAG_00139","SJAG_00483","SJAG_04353","SJAG_00448","SJAG_04933","SJAG_01610"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70748,72088,76183,78436,78446],"is_not":false,"summary":null,"term":"GO:0000993"},{"annotations":[64940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[77854,72276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal RNA polymerase II transcription machinery binding","termid":"GO:0001099"},{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"RNA polymerase II complex binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase II core binding","type":"exact"},{"name":"RNAP II core binding","type":"exact"}],"termid":"GO:0000993","terms_by_termid":{"GO:0000993":null,"GO:0099122":null,"GO:1990269":null}}


id: GO:0021704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the locus ceruleus is generated and organized. In mice, the locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"},{"relation_name":"part_of","term_name":"locus ceruleus development","termid":"GO:0021703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locus ceruleus morphogenesis","termid":"GO:0021704"}


id: GO:1990705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cholangiocytes, resulting in the expansion of the cholangiocyte population. A cholangiocyte is an epithelial cell that is part of the bile duct. Cholangiocytes contribute to bile secretion via net release of bicarbonate and water.","definition_xrefs":["PMID:24434010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholangiocyte proliferation","synonyms":[{"name":"hepatoblast proliferation","type":"exact"}],"termid":"GO:1990705"}


id: GO:0035494
data:
  {"annotated_genes":["SJAG_04909","SJAG_00330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57309,76219],"is_not":false,"summary":null,"term":"GO:0035494"}]},"cv_name":"biological_process","definition":"The disaggregation of the SNARE protein complex into its constituent components. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb","PMID:11697877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00330":null,"SJAG_04909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"SNARE complex disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0035494","terms_by_termid":{"GO:0035494":null}}


id: PBO:0054668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2074","termid":"PBO:0054668"}


id: MONDO:1011175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis that occurs in deer.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis, non-human animal","termid":"MONDO:1010299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrosis, deer","secondary_identifiers":["OMIA:000750-9850"],"termid":"MONDO:1011175","xrefs":{"Monarch":{"xref_id":"1011175"}}}


id: MONDO:0002501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade IV malignant astrocytic tumor that arises from the brain, usually the cerebral hemispheres. It is characterized by the presence of poorly differentiated astrocytes, cellular polymorphism, nuclear atypia, and increased mitotic activity. The prognosis is poor.","definition_xrefs":["NCIT:C4642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"glioblastoma","termid":"MONDO:0018177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain glioblastoma","secondary_identifiers":["MEDGEN:138100","SCTID:276828006","UMLS:C0349543","EFO:0006545","DOID:3073"],"synonyms":[{"name":"brain glioblastoma","type":"exact"},{"name":"brain glioblastoma (disease)","type":"exact"},{"name":"brain glioblastoma multiforme","type":"exact"},{"name":"brain glioblastoma multiforme (disease)","type":"exact"},{"name":"glioblastoma (disease) of brain","type":"exact"},{"name":"glioblastoma multiforme of brain","type":"exact"},{"name":"glioblastoma multiforme of the brain","type":"exact"},{"name":"grade IV astrocytic neoplasm of brain","type":"exact"},{"name":"grade IV astrocytic neoplasm of the brain","type":"exact"},{"name":"grade IV astrocytic tumor of brain","type":"exact"},{"name":"grade IV astrocytic tumor of the brain","type":"exact"},{"name":"grade IV astrocytic tumour of brain","type":"exact"},{"name":"grade IV astrocytic tumour of the brain","type":"exact"},{"name":"grade IV brain astrocytic neoplasm","type":"exact"},{"name":"grade IV brain astrocytic tumor","type":"exact"},{"name":"grade IV brain astrocytic tumour","type":"exact"}],"termid":"MONDO:0002501","xrefs":{"Monarch":{"xref_id":"0002501"}}}


id: MONDO:0000248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dengue disease that involves the most severe form of dengue fever, has material basis in Dengue virus [NCBITaxon:12637] with four serotypes (Dengue virus 1, 2, 3 and 4), which are transmitted by Aedes mosquito bite. The infection has symptom easy bruising, has symptom blood spots, has symptom bleeding gums, and has symptom nosebleeds. It is accompanied by circulatory collapse, involves hypotension, narrow pulse pressure (less than or equal to 20mm Hg), or frank shock. The shock occurs after two to six days of symptoms, followed by collapse, weak pulse, and blueness around the mouth.","definition_xrefs":["DOID:0050125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dengue hemorrhagic fever","termid":"MONDO:0005358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dengue shock syndrome","secondary_identifiers":["MESH:D019595","MEDGEN:83958","UMLS:C0376300","SCTID:409671005"],"synonyms":[{"name":"DSS","type":"exact"}],"termid":"MONDO:0000248","xrefs":{"Monarch":{"xref_id":"0000248"}}}


id: GO:0009738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the binding of the plant hormone abscisic acid (ABA) to a receptor, and ending with modulation of a cellular process, e.g. transcription.","definition_xrefs":["PMID:24269821","GOC:signaling","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to abscisic acid stimulus","termid":"GO:0071215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"abscisic acid-activated signaling pathway","synonyms":[{"name":"ABA signal transduction","type":"exact"},{"name":"ABA signaling","type":"exact"},{"name":"abscisic acid mediated signalling","type":"exact"},{"name":"abscisic acid signal transduction","type":"related"},{"name":"abscisic acid-mediated signaling pathway","type":"related"}],"termid":"GO:0009738"}


id: MONDO:0002998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that arises from the skull base.","definition_xrefs":["NCIT:C5272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base neoplasm","termid":"MONDO:0002785"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skull base meningioma","secondary_identifiers":["MEDGEN:233449","UMLS:C1335976","DOID:4437"],"synonyms":[{"name":"basicranium meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of basicranium","type":"exact"},{"name":"meningioma of skull base","type":"related"},{"name":"meningioma of the skull base","type":"exact"},{"name":"skull base meningioma","type":"exact"}],"termid":"MONDO:0002998","xrefs":{"Monarch":{"xref_id":"0002998"}}}


id: GO:0004423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2-sulfate groups of the L-iduronate 2-sulfate units of dermatan sulfate, heparan sulfate and heparin.","definition_xrefs":["EC:3.1.6.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"iduronate-2-sulfatase activity","secondary_identifiers":["Reactome:R-HSA-9036046","Reactome:R-HSA-1793182","MetaCyc:3.1.6.13-RXN","Reactome:R-HSA-1678650","Reactome:R-HSA-2262743"],"synonyms":[{"name":"2-sulfo-L-iduronate 2-sulfatase activity","type":"related"},{"name":"L-iduronate 2-sulfate sulfatase activity","type":"related"},{"name":"L-iduronate-2-sulfate 2-sulfohydrolase activity","type":"related"},{"name":"L-idurono sulfate sulfatase activity","type":"related"},{"name":"L-iduronosulfatase activity","type":"related"},{"name":"chondroitinsulfatase","type":"broad"},{"name":"iduronate sulfatase activity","type":"related"},{"name":"iduronate sulfate sulfatase activity","type":"related"},{"name":"iduronate-2-sulfate sulfatase activity","type":"related"},{"name":"iduronate-2-sulphatase activity","type":"exact"},{"name":"iduronide-2-sulfate sulfatase activity","type":"related"},{"name":"idurono-2-sulfatase activity","type":"related"},{"name":"sulfo-L-iduronate sulfatase activity","type":"related"},{"name":"sulfoiduronate sulfohydrolase activity","type":"related"}],"termid":"GO:0004423"}


id: PBO:0068458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 34, pseudogene","termid":"PBO:0068458"}


id: PBO:0068398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF216 intronic transcript 1","termid":"PBO:0068398"}


id: PBO:0068219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 526","termid":"PBO:0068219"}


id: GO:1900563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dehydroaustinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"dehydroaustinol metabolic process","termid":"GO:1900561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"dehydroaustinol biosynthetic process","synonyms":[{"name":"dehydroaustinol anabolism","type":"exact"},{"name":"dehydroaustinol biosynthesis","type":"exact"},{"name":"dehydroaustinol formation","type":"exact"},{"name":"dehydroaustinol synthesis","type":"exact"}],"termid":"GO:1900563"}


id: FYPO:0007430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dGTP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular dNTP level","termid":"FYPO:0005752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular dGTP level","synonyms":[{"name":"increased cellular dGTP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dGTP level during vegetative growth","type":"exact"},{"name":"increased dGTP accumulation","type":"related"}],"termid":"FYPO:0007430"}


id: PBO:0090452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex ATP-dependent chromatin remodeller Mit1","termid":"PBO:0090452"}


id: PBO:0086409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative glycoside hydrolase of the spore wall envelope; required for normal spore wall assembly, possibly for cross-linking between the glucan and chitosan layers; expressed during sporulation","termid":"PBO:0086409"}


id: GO:1905445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:bf","PMID:15533940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of clathrin coat assembly","termid":"GO:1905443"},{"relation_name":"positively_regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of clathrin coat assembly","synonyms":[{"name":"activation of clathrin cage assembly","type":"narrow"},{"name":"activation of clathrin coat assembly","type":"narrow"},{"name":"positive regulation of clathrin cage assembly","type":"exact"},{"name":"up regulation of clathrin cage assembly","type":"exact"},{"name":"up regulation of clathrin coat assembly","type":"exact"},{"name":"up-regulation of clathrin cage assembly","type":"exact"},{"name":"up-regulation of clathrin coat assembly","type":"exact"},{"name":"upregulation of clathrin cage assembly","type":"exact"},{"name":"upregulation of clathrin coat assembly","type":"exact"}],"termid":"GO:1905445"}


id: PBO:0060518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear prelamin A recognition factor","termid":"PBO:0060518"}


id: GO:0080190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of a plant axis (shoot axis or root) that originates from a lateral meristem.","definition_xrefs":["PO:0020145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral growth","termid":"GO:0080190"}


id: GO:0051325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase following cytokinesis which begins with G1 phase, proceeds through S phase and G2 phase and ends when prophase of meiosis or mitosis begins. During interphase the cell readies itself for meiosis or mitosis and the replication of its DNA occurs.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"interphase","secondary_identifiers":["Wikipedia:Interphase"],"synonyms":[{"name":"karyostasis","type":"exact"},{"name":"resting phase","type":"broad"}],"termid":"GO:0051325"}


id: MONDO:0012476
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84840],"is_not":false,"summary":null,"term":"MONDO:0012476"}]},"cv_name":"mondo","definition":"Autosomal spastic paraplegia type 30 (SPG30) is a form of hereditary spastic paraplegia characterized by either a pure spastic paraplegia phenotype, usually presenting in the first or second decade of life, with spastic lower extremities, usteady spastic gait, hyperreflexia and extensor plantar responses, or as a complicated phenotype with the additional manifestations of distal wasting, saccadic ocular movements, mild cerebellar ataxia and mild, distal, axonal neuropathy.","definition_xrefs":["Orphanet:101010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"},{"relation_name":"is_a","term_name":"KIF1A related neurological disorder","termid":"MONDO:0700055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 30","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5235139","MESH:C563677","MEDGEN:1710020","SCTID:763377006","GARD:16942","OMIM:610357","DOID:0110781"],"synonyms":[{"name":"KIF1A hereditary spastic paraplegia","type":"exact"},{"name":"SPG30","type":"exact"},{"name":"autosomal recessive spastic paraplegia 30","type":"exact"},{"name":"autosomal spastic paraplegia type 30","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in KIF1A","type":"exact"},{"name":"hereditary spastic paraplegia type 30","type":"exact"},{"name":"spastic paraplegia 30, autosomal dominant","type":"exact"},{"name":"spastic paraplegia 30, autosomal recessive","type":"related"}],"termid":"MONDO:0012476","terms_by_termid":{"MONDO:0012476":null},"xrefs":{"Monarch":{"xref_id":"0012476"}}}


id: GO:0008428
data:
  {"annotated_genes":["SJAG_02594"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060698"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ribonuclease.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease inhibitor activity","termid":"GO:0140721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02594":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0030234","GO:0004857","GO:0098772"],"is_obsolete":false,"name":"ribonuclease inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA nuclease inhibitor activity","type":"exact"}],"termid":"GO:0008428","terms_by_termid":{"GO:0060698":null}}


id: MONDO:0019596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to testicular steroidogenesis defect (obsolete MONDO:0019596)","secondary_identifiers":["Orphanet:90787"],"synonyms":[{"name":"46,XY DSD due to testicular steroidogenesis defect","type":"exact"}],"termid":"MONDO:0019596","xrefs":{"Monarch":{"xref_id":"0019596"}}}


id: GO:0047729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carnitine + H+ = 2-methylcholine + CO2.","definition_xrefs":["EC:4.1.1.42","RHEA:21576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carnitine decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R02398","MetaCyc:CARNITINE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"carnitine carboxy-lyase (2-methylcholine-forming)","type":"related"},{"name":"carnitine carboxy-lyase activity","type":"related"}],"termid":"GO:0047729"}


id: MONDO:0002597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bone tumor arising from the remnants of the fetal notochord. This category includes the chordoma and benign notochordal cell tumor.","definition_xrefs":["NCIT:C7063"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notochordal tumor","secondary_identifiers":["UMLS:C1335069","DOID:3303","MEDGEN:233252"],"synonyms":[{"name":"cancer of notochord","type":"exact"},{"name":"malignant neoplasm of notochord","type":"exact"},{"name":"malignant notochord neoplasm","type":"exact"},{"name":"neoplasm of notochord","type":"exact"},{"name":"notochord cancer","type":"exact"},{"name":"notochord neoplasm","type":"exact"},{"name":"notochord tumor","type":"exact"},{"name":"notochord tumour","type":"exact"},{"name":"notochordal cancer","type":"related"},{"name":"notochordal neoplasm","type":"exact"},{"name":"notochordal tumor","type":"exact"},{"name":"tumor of notochord","type":"exact"},{"name":"tumour of notochord","type":"exact"}],"termid":"MONDO:0002597","xrefs":{"Monarch":{"xref_id":"0002597"}}}


id: PBO:0077319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 54","termid":"PBO:0077319"}


id: PATO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000197 transfer_arousal (obsolete PATO:0000197)","termid":"PATO:0000197"}


id: GO:0051465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of corticotropin-releasing hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of corticotropin-releasing hormone secretion","termid":"GO:0043397"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"corticotropin-releasing hormone secretion","termid":"GO:0043396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of corticotropin-releasing hormone secretion","synonyms":[{"name":"down regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"down-regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"downregulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"inhibition of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"negative regulation of CRF secretion","type":"exact"},{"name":"negative regulation of CRH secretion","type":"exact"},{"name":"negative regulation of corticotropin-releasing factor secretion","type":"exact"}],"termid":"GO:0051465"}


id: PBO:0028867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_mRNA_level_during_vegetative_growth","termid":"PBO:0028867"}


id: PBO:0113515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiB protein kinase-like family member; mitochondrial inner membrane protein that interacts with outer membrane proteins Por1p and Om14p to form a MICOS-independent mitochondrial contact site; role in mitochondrial organization; contributes to mitochondrial lipid homeostasis; controls the cellular distribution of coenzyme Q (CoQ); contains a potential mitochondrial targeting sequence and predicted transmembrane domain","termid":"PBO:0113515"}


id: GO:0015986
data:
  {"annotated_genes":["SJAG_03925","SJAG_00542","SJAG_MIT09","SJAG_02564","SJAG_05204","SJAG_00915","SJAG_MIT37","SJAG_02105","SJAG_04122","SJAG_07003","SJAG_01471","SJAG_00985","SJAG_00133","SJAG_03114","SJAG_MIT15","SJAG_00438","SJAG_02598","SJAG_04422","SJAG_00836"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67175],"is_not":false,"summary":null,"term":"GO:0015986"},{"annotations":[117745],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[115588,88889,118801,107562,104771,93632,118807,118812,92618,93050,107654,94602,103434,101571,108543,102787,103405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ATP driven by transport of protons across a membrane to generate an electrochemical gradient (proton-motive force).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP biosynthetic process","termid":"GO:0006754"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"proton motive force-driven ATP synthesis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ATP synthesis coupled proton transport","type":"related"},{"name":"chemiosmosis","type":"broad"}],"termid":"GO:0015986","terms_by_termid":{"GO:0015986":null,"GO:0042776":null,"GO:1905707":null}}


id: PBO:0109130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 2","termid":"PBO:0109130"}


id: PBO:0055500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2934","termid":"PBO:0055500"}


id: FYPO:0003791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is increased at the silent mating-type cassettes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased meiotic recombination","termid":"FYPO:0000487"},{"relation_name":"is_a","term_name":"abnormal meiotic recombination at silent mating-type cassette","termid":"FYPO:0003346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"increased meiotic recombination at silent mating-type cassette","synonyms":[{"name":"increased meiotic recombination at mating-type region heterochromatin","type":"exact"}],"termid":"FYPO:0003791"}


id: MONDO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth resorption","termid":"MONDO:0001670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal pathological resorption of tooth","secondary_identifiers":["ICD9:521.41","DOID:13239","SCTID:52994003","MEDGEN:540237","UMLS:C0266880"],"synonyms":[{"name":"internal granuloma of pulp","type":"related"},{"name":"internal pathologic resorption","type":"exact"},{"name":"internal pathological resorption","type":"related"},{"name":"internal resorption of crown of tooth","type":"related"},{"name":"internal resorption of tooth","type":"exact"},{"name":"pathological tooth resorption - internal","type":"related"},{"name":"pink spot lesion of tooth","type":"related"},{"name":"pink tooth of mummery","type":"related"}],"termid":"MONDO:0001668","xrefs":{"Monarch":{"xref_id":"0001668"}}}


id: PBO:0054898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2312","termid":"PBO:0054898"}


id: PBO:0060917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 4","termid":"PBO:0060917"}


id: PBO:0056107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA1 pseudogene 2","termid":"PBO:0056107"}


id: PBO:0053830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1095","termid":"PBO:0053830"}


id: GO:0009883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of absorbing and responding to electromagnetic radiation with a wavelength of approximately 660-730nm. The response may involve a change in conformation.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor activity","termid":"GO:0009881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"red or far-red light photoreceptor activity","synonyms":[{"name":"red/far-red light photoreceptor activity","type":"exact"}],"termid":"GO:0009883"}


id: PBO:0072413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 18","termid":"PBO:0072413"}


id: MONDO:0004168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of testicular seminoma characterized by the presence of seminoma cells arranged in cribriform patterns and few lymphocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular seminoma","termid":"MONDO:0003669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cribriform variant testicular seminoma","secondary_identifiers":["DOID:7269","NCIT:C40957","UMLS:C1515292","MEDGEN:308258"],"synonyms":[{"name":"testicular seminoma, cribriform variant","type":"exact"}],"termid":"MONDO:0004168","xrefs":{"Monarch":{"xref_id":"0004168"}}}


id: PBO:0057072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 152","termid":"PBO:0057072"}


id: PBO:0055684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member N","termid":"PBO:0055684"}


id: MONDO:0010121
data:
  {"annotated_genes":["SJAG_01852"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86856],"is_not":false,"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"Thrombocytopenia-absent radius (TAR) syndrome is a very rare congenital malformation syndrome characterized by bilateral radial aplasia and thrombocytopenia.","definition_xrefs":["Orphanet:3320"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia-absent radius syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5116","DOID:14699","MESH:C536940","NCIT:C99038","DECIPHER:64","MedDRA:10071719","NORD:1768","OMIM:274000","ICD9:759.89","MEDGEN:61235","UMLS:C0175703","NANDO:2200661","SCTID:85589009"],"synonyms":[{"name":"1q21.1 susceptibility locus for Thrombocytopenia-Absent Radius (TAR) syndrome","type":"exact"},{"name":"TAR","type":"related"},{"name":"TAR syndrome","type":"exact"},{"name":"Tar syndrome","type":"related"},{"name":"Thrombocytopenia Absent Radius Syndrome","type":"exact"},{"name":"absent radii and thrombocytopenia","type":"related"},{"name":"chromosome 1Q21.1 deletion syndrome, 200-Kb","type":"related"},{"name":"radial aplasia-thrombocytopenia syndrome","type":"exact"},{"name":"thrombocytopenia absent radii","type":"related"},{"name":"thrombocytopenia absent radius syndrome","type":"related"},{"name":"thrombocytopenia with absent radii (TAR) syndrome","type":"exact"},{"name":"thrombocytopenia-absent radius syndrome","type":"exact"}],"termid":"MONDO:0010121","terms_by_termid":{"MONDO:0010121":null},"xrefs":{"Monarch":{"xref_id":"0010121"}}}


id: GO:0030383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any interaction between a pathogen and its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete host-pathogen interaction (obsolete GO:0030383)","synonyms":[{"name":"host-pathogen interaction","type":"exact"}],"termid":"GO:0030383"}


id: PBO:0056897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor 2","termid":"PBO:0056897"}


id: PBO:0075227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 3 pseudogene 1 X-linked","termid":"PBO:0075227"}


id: MONDO:0971010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyloid neuropathy","termid":"MONDO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"amyloidosis, hereditary systemic 6","secondary_identifiers":["MEDGEN:1860723","OMIM:620659","UMLS:C5935573"],"termid":"MONDO:0971010","xrefs":{"Monarch":{"xref_id":"0971010"}}}


id: CHEBI:142517
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A benzoate ester resulting from the formal condensation of the carboxy group of vanillic acid with the hydroxy group of (−)-borneol. A metabolite isolated from Ferula dissecta.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tschimganine","termid":"CHEBI:142517"}


id: PBO:0050934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 4","termid":"PBO:0050934"}


id: PBO:0113445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit beta1 of the nascent polypeptide-associated complex (NAC); involved in protein targeting to mitochondria; peripheral component of cytoplasmic ribosomes; regulates Atg32p phosphorylation to promote respiration-induced mitophagy; enhances DNA binding of the Gal4p; homolog of human BTF3b; EGD1 has a paralog, BTT1, that arose from the whole genome duplication","termid":"PBO:0113445"}


id: GO:2000166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in pericardium morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in pericardium morphogenesis (obsolete GO:2000166)","termid":"GO:2000166"}


id: PBO:0065982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1F pseudogene","termid":"PBO:0065982"}


id: MONDO:0003504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the anal canal. It includes well differentiated neuroendocrine tumors (low and intermediate grade) and poorly differentiated neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C5603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"rectum neuroendocrine neoplasm","termid":"MONDO:0003646"},{"relation_name":"is_a","term_name":"anal canal carcinoma","termid":"MONDO:0007108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anal canal neuroendocrine neoplasm","secondary_identifiers":["SCTID:717917007","UMLS:C1332273","MEDGEN:231063","DOID:5545"],"synonyms":[{"name":"anal canal NET","type":"related"},{"name":"anal canal neuroendocrine neoplasm","type":"exact"},{"name":"anal canal neuroendocrine tumor","type":"related"},{"name":"anal canal neuroendocrine tumor, well differentiated, low or intermediate grade","type":"related"},{"name":"anal canal neuroendocrine tumour","type":"related"},{"name":"anal neuroendocrine neoplasm","type":"exact"},{"name":"anal neuroendocrine tumor","type":"related"},{"name":"anal neuroendocrine tumour","type":"related"},{"name":"anus neuroendocrine neoplasm","type":"exact"},{"name":"anus neuroendocrine tumor","type":"related"},{"name":"anus neuroendocrine tumour","type":"related"},{"name":"neuroendocrine neoplasm of anal canal","type":"exact"},{"name":"neuroendocrine neoplasm of anus","type":"exact"},{"name":"neuroendocrine neoplasm of the anus","type":"exact"},{"name":"neuroendocrine tumor of anus","type":"related"},{"name":"neuroendocrine tumour of anus","type":"related"}],"termid":"MONDO:0003504","xrefs":{"Monarch":{"xref_id":"0003504"}}}


id: PBO:0068073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 378","termid":"PBO:0068073"}


id: PBO:0086802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YCL002C is not an essential gene","termid":"PBO:0086802"}


id: PBO:0057894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3198-1","termid":"PBO:0057894"}


id: PBO:0064026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 60","termid":"PBO:0064026"}


id: PBO:0035984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_hydroxyurea","termid":"PBO:0035984"}


id: GO:0018111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine = D-methionine.","definition_xrefs":["RHEA:12492","EC:5.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"methionine racemase activity","secondary_identifiers":["KEGG_REACTION:R00655","MetaCyc:METHIONINE-RACEMASE-RXN"],"termid":"GO:0018111"}


id: GO:0018457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + perillyl alcohol = H+ + NADH + perillyl aldehyde.","definition_xrefs":["EC:1.1.1.144","RHEA:10664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"perillyl-alcohol dehydrogenase (NAD+) activity","secondary_identifiers":["UM-BBD_reactionID:r0729","MetaCyc:PERILLYL-ALCOHOL-DEHYDROGENASE-RXN","KEGG_REACTION:R03945"],"synonyms":[{"name":"perillyl alcohol dehydrogenase activity","type":"related"},{"name":"perillyl-alcohol dehydrogenase activity","type":"broad"},{"name":"perillyl-alcohol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018457"}


id: GO:1903659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of complement-dependent cytotoxicity.","definition_xrefs":["PMID:24280217","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"regulates","term_name":"complement-dependent cytotoxicity","termid":"GO:0097278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement-dependent cytotoxicity","termid":"GO:1903659"}


id: GO:0033805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: S-adenosyl-L-methionine + sarcosine = S-adenosyl-L-homocysteine + N,N-dimethylglycine, and S-adenosyl-L-methionine + N,N-dimethylglycine = S-adenosyl-L-homocysteine + betaine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sarcosine/dimethylglycine N-methyltransferase activity (obsolete GO:0033805)","synonyms":[{"name":"ApDMT","type":"related"},{"name":"S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase activity","type":"narrow"},{"name":"SDMT","type":"related"},{"name":"sarcosine dimethylglycine N-methyltransferase activity","type":"narrow"},{"name":"sarcosine dimethylglycine methyltransferase activity","type":"narrow"},{"name":"sarcosine/dimethylglycine N-methyltransferase activity","type":"exact"}],"termid":"GO:0033805"}


id: GO:0051037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription as part of a meiotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in meiotic cell cycle (obsolete GO:0051037)","synonyms":[{"name":"meiotic regulation of transcription","type":"exact"},{"name":"regulation of transcription, meiotic","type":"exact"}],"termid":"GO:0051037"}


id: PBO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 35, NatC auxiliary subunit","termid":"PBO:0060410"}


id: GO:0070777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-aspartate, the D-enantiomer of the anion of (2R)-2-aminobutanedioic acid  is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate transmembrane transport","termid":"GO:0015810"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"D-aspartate transmembrane transport","termid":"GO:0070777"}


id: PBO:0068234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 5","termid":"PBO:0068234"}


id: GO:0052164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts either the host signal transduction pathways leading to the production of reactive oxygen species as part of the host innate immune response.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxidative stress","termid":"GO:0034599"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont defense to host-produced reactive oxygen species","secondary_identifiers":["Reactome:R-HSA-1222387","GO:0052059","GO:0052550","GO:0052567","GO:0052385","GO:0052303"],"synonyms":[{"name":"evasion by symbiont of cellular damage caused by host oxidative burst","type":"narrow"},{"name":"evasion or tolerance by organism of host-produced reactive oxygen species","type":"exact"},{"name":"evasion or tolerance by organism of reactive oxygen species produced by other organism involved in symbiotic interaction","type":"broad"},{"name":"evasion or tolerance by organism of reactive oxygen species produced during host defense response","type":"exact"},{"name":"evasion or tolerance by symbiont of host-produced reactive oxygen species","type":"exact"},{"name":"evasion or tolerance by symbiont of reactive oxygen species produced by other organism involved in symbiotic interaction","type":"broad"},{"name":"evasion or tolerance of defense-related host metabolic burst","type":"exact"},{"name":"evasion or tolerance of defense-related host oxidative burst","type":"exact"},{"name":"evasion or tolerance of defense-related host respiratory burst","type":"exact"},{"name":"evasion or tolerance of host-produced AOS","type":"exact"},{"name":"evasion or tolerance of host-produced ROIs","type":"exact"},{"name":"evasion or tolerance of host-produced ROS","type":"exact"},{"name":"evasion or tolerance of host-produced active oxygen species","type":"exact"},{"name":"evasion or tolerance of host-produced reactive oxygen intermediates","type":"exact"},{"name":"evasion or tolerance of reactive oxygen species produced by host","type":"exact"},{"name":"modulation by organism of defense-related host AOS production","type":"exact"},{"name":"modulation by organism of defense-related host ROI production","type":"exact"},{"name":"modulation by organism of defense-related host ROS production","type":"exact"},{"name":"modulation by organism of defense-related host active oxygen species production","type":"exact"},{"name":"modulation by organism of defense-related host metabolic burst","type":"exact"},{"name":"modulation by organism of defense-related host oxidative burst","type":"exact"},{"name":"modulation by organism of defense-related host reactive oxidative species production","type":"exact"},{"name":"modulation by organism of defense-related host reactive oxygen intermediate production","type":"exact"},{"name":"modulation by organism of defense-related host respiratory burst","type":"exact"},{"name":"modulation by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"response to defense-related host reactive oxygen species production","type":"related"},{"name":"response to defense-related reactive oxygen species production by other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052164"}


id: PBO:0058849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8078","termid":"PBO:0058849"}


id: GO:0003841
data:
  {"annotated_genes":["SJAG_01957","SJAG_04792","SJAG_04041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71443,76627,89796],"is_not":false,"summary":null,"term":"GO:0003841"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol-3-phosphate = CoA + 1,2-diacyl-sn-glycerol-3-phosphate.","definition_xrefs":["GOC:ab","EC:2.3.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"},{"relation_name":"is_a","term_name":"lysophosphatidic acid acyltransferase activity","termid":"GO:0042171"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_04041":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-1623","Reactome:R-HSA-1482539","Reactome:R-HSA-1482636","Reactome:R-HSA-8849345","RHEA:19709","Reactome:R-HSA-1482598","Reactome:R-HSA-1482547","Reactome:R-HSA-1482548","Reactome:R-HSA-1482667","Reactome:R-HSA-1482689","Reactome:R-HSA-1482894","Reactome:R-HSA-75885","GO:0004469"],"synonyms":[{"name":"1-acyl-sn-glycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol 3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"1-acylglycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerolphosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerophosphate acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase activity","type":"related"},{"name":"lysophosphatidate acyltransferase activity","type":"exact"},{"name":"lysophosphatidic acid-acyltransferase activity","type":"related"}],"termid":"GO:0003841","terms_by_termid":{"GO:0003841":null}}


id: PBO:0048837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 3 like","termid":"PBO:0048837"}


id: FYPO:0004048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione peroxidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal glutathione peroxidase activity","termid":"FYPO:0004048"}


id: GO:0014058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of acetylcholine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acetylcholine secretion, neurotransmission","termid":"GO:0014056"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission, cholinergic","termid":"GO:0032223"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of amine transport","termid":"GO:0051953"},{"relation_name":"negatively_regulates","term_name":"acetylcholine secretion, neurotransmission","termid":"GO:0014055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine secretion, neurotransmission","synonyms":[{"name":"down regulation of acetylcholine secretion","type":"exact"},{"name":"down-regulation of acetylcholine secretion","type":"exact"},{"name":"downregulation of acetylcholine secretion","type":"exact"},{"name":"inhibition of acetylcholine secretion","type":"narrow"}],"termid":"GO:0014058"}


id: GO:0003805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Arg-Ala and Arg-Val bonds in factor IX to form factor IXa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor XIa activity (obsolete GO:0003805)","synonyms":[{"name":"activated blood-coagulation factor XI","type":"related"},{"name":"activated plasma thromboplastin antecedent","type":"related"},{"name":"blood coagulation factor XI activity","type":"exact"},{"name":"blood-coagulation factor XIa","type":"related"},{"name":"coagulation factor XIa activity","type":"exact"},{"name":"plasma thromboplastin antecedent activity","type":"related"}],"termid":"GO:0003805"}


id: GO:0052318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phytoalexin metabolism, the chemical reactions and pathways involving phytoalexins, any of a range of substances produced by plants as part of their defense response.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phytoalexin metabolic process (obsolete GO:0052318)","synonyms":[{"name":"regulation of phytoalexin metabolism","type":"exact"}],"termid":"GO:0052318"}


id: PBO:0047443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor Ib, pseudogene","termid":"PBO:0047443"}


id: PBO:0046071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 2","termid":"PBO:0046071"}


id: SO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by proteomics data.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_supported_by_sequence_similarity_data","termid":"SO:1001251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_peptide_spectrum_match","termid":"SO:0002071"}


id: GO:0031502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity; usually includes members of the PMT1 and PMT2 protein subfamilies.","definition_xrefs":["GOC:pr","GOC:mah","PMID:15948957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005789","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","synonyms":[{"name":"PMT family mannosyltransferase complex","type":"related"},{"name":"protein O-mannosyltransferase complex","type":"exact"}],"termid":"GO:0031502"}


id: PBO:0113125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential core component of the TIM23 protein translocase complex; forms the protein translocation path with Mgr2p, while Tim23p contributes to the architecture of the import channel; may link the import motor to the core translocase of the inner mitochondrial membrane (TIM23 complex)","termid":"PBO:0113125"}


id: PBO:0090367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human KIN ortholog","termid":"PBO:0090367"}


id: PBO:0028969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_superoxide_dismutase_activity","termid":"PBO:0028969"}


id: PBO:0017966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 gamma subunit","termid":"PBO:0017966"}


id: GO:0106057
data:
  {"annotated_genes":["SJAG_02858","SJAG_03799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100751,115870],"is_not":false,"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcineurin-mediated signaling.","definition_xrefs":["PMID:25081204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium-mediated signaling","termid":"GO:0050849"},{"relation_name":"is_a","term_name":"regulation of calcineurin-mediated signaling","termid":"GO:0106056"},{"relation_name":"negatively_regulates","term_name":"calcineurin-mediated signaling","termid":"GO:0097720"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03799":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcineurin-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106057","terms_by_termid":{"GO:0106057":null}}


id: PBO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD/NADH kinase (predicted)","termid":"PBO:0002041"}


id: PATO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000484 tactile hyporesponsive (obsolete PATO:0000484)","termid":"PATO:0000484"}


id: FYPO:0005948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin regions where RNA polymerase II actively transcribes genes is decreased.","definition_xrefs":["PMID:28218250","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","termid":"FYPO:0004161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at polymerase II highly transcribed genes during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005948"}


id: PBO:0067832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 134","termid":"PBO:0067832"}


id: MONDO:0019009
data:
  {"annotated_genes":["SJAG_03067","SJAG_00991","SJAG_00289","SJAG_05346","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86380,86382,86384,86383,86381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011818"}]},"cv_name":"mondo","definition":"Isolated focal cortical dysplasia is a rare, genetic, non-syndromic cerebral malformation due to abnormal neuronal migration disorder characterized by variable-sized, focalized malformations located in any part(s) of the cerebral cortex, which manifests with drug-resistant epilepsy (usually leading to intellectual disability) and behavioral disturbances. Abnormal MRI findings (e.g. abnormal white and/or gray matter signal, blurred gray-white matter junction, localized volume loss, cortical thickening, abnormal gyral pattern, abnormal hippocampus) and variable histopathologic patterns are associated.","definition_xrefs":["Orphanet:65683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortical dysplasia","termid":"MONDO:0017094"},{"relation_name":"is_a","term_name":"overgrowth syndrome and/or cerebral malformations due to abnormalities in MTOR pathway genes","termid":"MONDO:0100283"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1645432","NANDO:1200564","UMLS:C4707795","GARD:16671","SCTID:766710005"],"synonyms":[{"name":"epilepsy due to FCD","type":"exact"}],"termid":"MONDO:0019009","terms_by_termid":{"MONDO:0011818":null},"xrefs":{"Monarch":{"xref_id":"0019009"}}}


id: MONDO:0037254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transitional cell neoplasm","secondary_identifiers":["UMLS:C0334265","MEDGEN:90754","NCIT:C6783"],"synonyms":[{"name":"transitional cell neoplasm","type":"exact"},{"name":"transitional cell tumor","type":"exact"},{"name":"transitional cell tumour","type":"exact"}],"termid":"MONDO:0037254","xrefs":{"Monarch":{"xref_id":"0037254"}}}


id: FYPO:0002796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein degradation is abnormal when the cell is subject to nitrogen starvation. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein degradation during nitrogen starvation","synonyms":[{"name":"abnormal protein breakdown during nitrogen starvation","type":"exact"},{"name":"abnormal protein catabolic process during nitrogen starvation","type":"exact"},{"name":"abnormal protein catabolism during nitrogen starvation","type":"exact"},{"name":"abnormal protein degradation during nitrogen depletion","type":"exact"},{"name":"abnormal protein degradation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002796"}


id: FYPO:0000287
data:
  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