# terms

id: SO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A candidate gene whose function has something in common biologically with the trait under investigation.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidate_gene","termid":"SO:0001867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_candidate_gene","synonyms":[{"name":"functional candidate gene","type":"exact"},{"name":"functional target gene","type":"exact"}],"termid":"SO:0001869"}


id: PBO:0067546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 692, pseudogene","termid":"PBO:0067546"}


id: PR:O14088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C2F3.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.05c","synonyms":[{"name":"Spom972h-SPAC2F3.05c","type":"exact"}],"termid":"PR:O14088"}


id: GO:0051411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively and non-covalently with ALP, actinin-associated LIM protein of the Z band. ALP is a PDZ/LIM domain protein found in the Z band.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete ALP binding (obsolete GO:0051411)","synonyms":[{"name":"ALP binding","type":"exact"},{"name":"actinin-associated LIM protein binding","type":"exact"}],"termid":"GO:0051411"}


id: GO:0035858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an eosinophil cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["CL:0000771","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"eosinophil fate commitment","termid":"GO:0035854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil fate determination","synonyms":[{"name":"eosinophil cell fate determination","type":"exact"}],"termid":"GO:0035858"}


id: MONDO:0032633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 29","secondary_identifiers":["UMLS:C4748830","GARD:16330","DOID:0112084","OMIM:618250","MEDGEN:1648451"],"synonyms":[{"name":"MC1DN29","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 29","type":"related"}],"termid":"MONDO:0032633","xrefs":{"Monarch":{"xref_id":"0032633"}}}


id: FYPO:0000033
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119034],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[119356],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119035],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring localization is abnormal. Actomyosin contractile ring localization is the part of cytokinesis in which the actomyosin contractile ring is assembled and/or maintained in a specific location.","definition_xrefs":["GO:1902405","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000032","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"abnormal actomyosin contractile ring localization","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta","pom1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring localisation","type":"exact"},{"name":"abnormal actomyosin contractile ring localization during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring localization during vegetative growth","type":"exact"},{"name":"abnormal actomyosin contractile ring localization involved in mitotic cytokinesis","type":"exact"},{"name":"abnormal actomyosin contractile ring positioning","type":"exact"},{"name":"abnormal cytokinetic contractile ring localization","type":"exact"},{"name":"abnormal mitotic contractile ring localization","type":"exact"},{"name":"cytokinesis defects, misplaced contractile ring","type":"exact"}],"termid":"FYPO:0000033","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0012698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome type 2 in which the cause of the disease is a mutation in the SOX10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2E","secondary_identifiers":["OMIM:611584","DOID:0110956","GARD:15521","MEDGEN:398476","UMLS:C2700405"],"synonyms":[{"name":"SOX10 Waardenburg syndrome type 2","type":"exact"},{"name":"WS2E","type":"exact"},{"name":"WS2E with or without neurological involvement","type":"exact"},{"name":"Waardenburg syndrome type 2 caused by mutation in SOX10","type":"exact"},{"name":"Waardenburg syndrome type 2E with or without neurologic involvement","type":"exact"},{"name":"Waardenburg syndrome type IIE","type":"exact"},{"name":"Waardenburg syndrome, type 2E","type":"related"},{"name":"Waardenburg syndrome, type 2E, with or without neurologic involvement","type":"related"},{"name":"Ws2E, with or without neurologic involvement","type":"related"},{"name":"hypogonadotropic hypogonadism with anosmia and deafness with or without hypopigmentation","type":"exact"},{"name":"hypogonadotropic hypogonadism with anosmia and deafness, with or without hypopigmentation","type":"related"}],"termid":"MONDO:0012698","xrefs":{"Monarch":{"xref_id":"0012698"}}}


id: PBO:0068454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 30, pseudogene","termid":"PBO:0068454"}


id: MONDO:0012965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 4","secondary_identifiers":["GARD:16505","DOID:0081117","MEDGEN:436440","MESH:C567231","UMLS:C2675462","OMIM:612627"],"synonyms":[{"name":"BFIS4","type":"exact"},{"name":"convulsions, benign familial infantile, 4","type":"related"},{"name":"seizures, benign familial infantile, 4","type":"exact"}],"termid":"MONDO:0012965","xrefs":{"Monarch":{"xref_id":"0012965"}}}


id: PBO:0086895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family","termid":"PBO:0086895"}


id: GO:0002344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which B cells produce antibodies with increased antigen affinity. This is accomplished by somatic hypermutation and selection for B cells which produce higher affinity antibodies to antigen.","definition_xrefs":["GOC:jal","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral B cell selection","termid":"GO:0002343"},{"relation_name":"part_of","term_name":"immunoglobulin production involved in immunoglobulin-mediated immune response","termid":"GO:0002381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"B cell affinity maturation","synonyms":[{"name":"B lymphocyte affinity maturation","type":"exact"},{"name":"B-cell affinity maturation","type":"exact"},{"name":"B-lymphocyte affinity maturation","type":"exact"}],"termid":"GO:0002344"}


id: PBO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase epsilon subunit (predicted)","termid":"PBO:0004662"}


id: PBO:0061470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2 pseudogene 5","termid":"PBO:0061470"}


id: GO:0052478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the deposition of callose by the symbiont in its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont cell wall callose deposition (obsolete GO:0052478)","synonyms":[{"name":"negative regulation by organism of defense-related symbiont cell wall callose deposition","type":"exact"}],"termid":"GO:0052478"}


id: MONDO:0015311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the presence of a unilateral angioma on the face and autistic developmental problems characterized by language delay and atypical social interactions.","definition_xrefs":["Orphanet:137911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism-facial port-wine stain syndrome","secondary_identifiers":["GARD:10303"],"synonyms":[{"name":"autism with port-wine stain","type":"related"}],"termid":"MONDO:0015311","xrefs":{"Monarch":{"xref_id":"0015311"}}}


id: GO:0005838
data:
  {"annotated_genes":["SJAG_03638","SJAG_02992","SJAG_01203","SJAG_01131","SJAG_00712","SJAG_04144","SJAG_03321","SJAG_01652","SJAG_04572","SJAG_03733","SJAG_04484","SJAG_00766","SJAG_01544","SJAG_04477","SJAG_04211","SJAG_04088","SJAG_00738","SJAG_02900","SJAG_01489","SJAG_00762","SJAG_03408"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78947,76882,77717,77907,79623,72888,79236,73449,78057],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[73947,73956,62308,71075,73192,110978,72628,79162,114898,77952,98706,71223,76128],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes and unfolds ubiquitinated proteins, and translocates them to the proteasome core complex.","definition_xrefs":["GOC:rb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome accessory complex","termid":"GO:0022624"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_03733":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome regulatory particle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"19S regulatory particle","type":"narrow"},{"name":"PA700 proteasome activator","type":"narrow"},{"name":"PA700-dependent proteasome activator","type":"exact"},{"name":"modulator complex","type":"related"}],"termid":"GO:0005838","terms_by_termid":{"GO:0008540":null,"GO:0008541":null}}


id: PBO:0057251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 451b","termid":"PBO:0057251"}


id: PBO:0063885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class O","termid":"PBO:0063885"}


id: GO:0036393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiocyanate (SCN-) + hydrogen peroxide (H2O2) = hypothiocyanite (OSCN-) + 2 H2O. Catalyzes the hydrogen peroxide oxidation of thiocyanate.","definition_xrefs":["GOC:pm","PMID:12626341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"thiocyanate peroxidase activity","synonyms":[{"name":"lactoperoxidase activity","type":"broad"}],"termid":"GO:0036393"}


id: FYPO:0003218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the modification of a wobble base uridine residue in a tRNA to 5-methoxycarbonylmethyl-2-thiouridine is abolished.","definition_xrefs":["GO:0002926","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished tRNA modification","termid":"FYPO:0008344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"abolished tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis","synonyms":[{"name":"abolished mcm5s2U34 biosynthesis","type":"exact"},{"name":"abolished tRNA U34 5-methoxycarbonylmethyl-2-thiouridine biosynthesis","type":"exact"},{"name":"abolished tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis during mitotic cell cycle","type":"related"},{"name":"abolished tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis during vegetative growth","type":"exact"},{"name":"abolished thiolation and methoxycarbonylmethylation at tRNA U34","type":"exact"},{"name":"tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis abolished","type":"exact"}],"termid":"FYPO:0003218"}


id: PBO:0062517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 3 (gene/pseudogene)","termid":"PBO:0062517"}


id: PBO:0017873
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter for GlyceroPhosphodiester","termid":"PBO:0017873"}


id: MONDO:0859162
data:
  {"annotated_genes":["SJAG_02550"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86329],"is_not":false,"summary":null,"term":"MONDO:0859162"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with infantile epileptic spasms","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619373","UMLS:C5543538","MEDGEN:1781627"],"termid":"MONDO:0859162","terms_by_termid":{"MONDO:0859162":null},"xrefs":{"Monarch":{"xref_id":"0859162"}}}


id: PATO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000899 soma dependent fertility value (obsolete PATO:0000899)","termid":"PATO:0000899"}


id: PBO:0048325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 36","termid":"PBO:0048325"}


id: PBO:0029455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_import","termid":"PBO:0029455"}


id: GO:0008401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of retinoic acid to 4-hydroxy-retinoic acid.","definition_xrefs":["PMID:9250660","PMID:19519282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"retinoic acid 4-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-212007","Reactome:R-HSA-5362525","Reactome:R-HSA-211874","Reactome:R-HSA-211923","Reactome:R-HSA-5602050","Reactome:R-HSA-5602063"],"synonyms":[{"name":"cytochrome P450 CYP261","type":"narrow"}],"termid":"GO:0008401"}


id: PBO:0047631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fission, mitochondrial 1","termid":"PBO:0047631"}


id: MONDO:0008071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"autosomal dominant progressive nephropathy with hypertension","secondary_identifiers":["MEDGEN:98012","Orphanet:88659","icd11.foundation:1997246041","MESH:C562889","UMLS:C0403443","GARD:16772","ICD9:583.9","SCTID:703310005","OMIM:161900"],"synonyms":[{"name":"RFH1","type":"related"},{"name":"nephritis, familial, without deafness or ocular defect","type":"related"},{"name":"nephropathy, familial","type":"related"},{"name":"nephropathy-hypertension","type":"exact"},{"name":"renal failure, adult-onset","type":"related"},{"name":"renal failure, progressive, with hypertension","type":"related"}],"termid":"MONDO:0008071","xrefs":{"Monarch":{"xref_id":"0008071"}}}


id: GO:1905045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GOC:BHF_miRNA","PMID:22393241","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"},{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation involved in axon regeneration","synonyms":[{"name":"down regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"down-regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"downregulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"inhibition of Schwann cell proliferation involved in axon regeneration","type":"narrow"}],"termid":"GO:1905045"}


id: FYECO:0000397
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ micafungin","termid":"FYECO:0000395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin LD","termid":"FYECO:0000397"}


id: PBO:0030495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stabilized_iron-sulfur_cluster_binding","termid":"PBO:0030495"}


id: MONDO:1010134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pityriasis rosea that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pityriasis rosea, non-human animal","secondary_identifiers":["OMIA:000801"],"termid":"MONDO:1010134","xrefs":{"Monarch":{"xref_id":"1010134"}}}


id: MONDO:0017910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dehydrated hereditary stomatocytosis (DHS) is a rare hemolytic anemia characterized by a decreased red cell osmotic fragility due to a defect in cation permeability, resulting in red cell dehydration and mild to moderate compensated hemolysis. Pseudohyperkalemia (loss of potassium ions from red cells on storage at room temperature) is sometimes observed.","definition_xrefs":["Orphanet:3202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary stomatocytosis","termid":"MONDO:0020102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"dehydrated hereditary stomatocytosis","secondary_identifiers":["icd11.foundation:799088159","SCTID:715526002","MEDGEN:124415","UMLS:C0272051","DOID:0111575","GARD:5623","NANDO:2200633"],"synonyms":[{"name":"Desiccytosis hereditary","type":"related"},{"name":"hereditary xerocytosis","type":"exact"},{"name":"xerocytosis hereditary","type":"related"}],"termid":"MONDO:0017910","xrefs":{"Monarch":{"xref_id":"0017910"}}}


id: MONDO:0002554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor derived from schwann cells of the peripheral sympathetic nervous system, including the sympathetic plexus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system neoplasm","termid":"MONDO:0002366"},{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sympathetic neurilemmoma","secondary_identifiers":["NCIT:C5421","DOID:3201","MEDGEN:236964","UMLS:C1336543"],"synonyms":[{"name":"sympathetic schwannoma","type":"exact"}],"termid":"MONDO:0002554","xrefs":{"Monarch":{"xref_id":"0002554"}}}


id: GO:0072160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the nephron tubule as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"part_of","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"}


id: PBO:0086000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to medium chain dehydrogenase/reductases; expression induced by stresses including osmotic shock, DNA damaging agents, and other chemicals; GFP-fusion protein localizes to the cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0086000"}


id: GO:0008292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetylcholine, the acetic acid ester of the organic base choline.","definition_xrefs":["GOC:jl","ISBN:0192800752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine metabolic process","termid":"GO:0008291"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylcholine biosynthetic process","synonyms":[{"name":"acetylcholine anabolism","type":"exact"},{"name":"acetylcholine biosynthesis","type":"exact"},{"name":"acetylcholine formation","type":"exact"},{"name":"acetylcholine synthesis","type":"exact"}],"termid":"GO:0008292"}


id: PR:O74782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC25B2.10 gene.","definition_xrefs":["UniProtKB:O74782","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"universal stress protein A family protein C25B2.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.10","synonyms":[{"name":"Spom972h-SPBC25B2.10","type":"exact"}],"termid":"PR:O74782"}


id: GO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex that occurs in response to suckling, beginning with a nerve impulse from a receptor in the mammary gland and ending with the ejection of milk from the gland. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:st","GOC:dph","GOC:cjm","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"},{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"},{"relation_name":"part_of","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"milk ejection reflex","synonyms":[{"name":"milk ejection","type":"exact"}],"termid":"GO:0060156"}


id: GO:0061948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The discharge, by sperm, of a single, anterior secretory granule before the sperm reaches to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents.","definition_xrefs":["PMID:19153666","PMID:21380641","PMID:26655718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"premature acrosome loss","synonyms":[{"name":"spontaneous acrosome loss","type":"exact"}],"termid":"GO:0061948"}


id: PBO:0091615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine acetyltransferase","termid":"PBO:0091615"}


id: PBO:0051961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor interacting protein","termid":"PBO:0051961"}


id: MONDO:0013237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"carpal tunnel syndrome","termid":"MONDO:0007275"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to mononeuropathy of the median nerve, mild","secondary_identifiers":["OMIM:613353","UMLS:C3150596","MEDGEN:461946"],"synonyms":[{"name":"MNMN","type":"related"},{"name":"carpal tunnel syndrome, susceptibility to","type":"related"},{"name":"mononeuropathy of the median nerve, mild","type":"exact"}],"termid":"MONDO:0013237","xrefs":{"Monarch":{"xref_id":"0013237"}}}


id: GO:0050372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n ATP + calmodulin + n ubiquitin = n AMP + n diphosphate + ubiquitin(n)-calmodulin.","definition_xrefs":["MetaCyc:UBIQUITIN--CALMODULIN-LIGASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-calmodulin ligase activity (obsolete GO:0050372)","synonyms":[{"name":"calmodulin:ubiquitin ligase (AMP-forming)","type":"related"},{"name":"uCaM-synthetase activity","type":"related"},{"name":"ubiquitin-calmodulin synthetase activity","type":"related"},{"name":"ubiquityl-calmodulin synthase activity","type":"related"},{"name":"ubiquityl-calmodulin synthetase activity","type":"related"}],"termid":"GO:0050372"}


id: PBO:0055914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A2","termid":"PBO:0055914"}


id: MONDO:0006465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid gland oncocytic follicular carcinoma (obsolete MONDO:0006465)","secondary_identifiers":["EFO:1000592"],"termid":"MONDO:0006465","xrefs":{"Monarch":{"xref_id":"0006465"}}}


id: PBO:0064272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G5","termid":"PBO:0064272"}


id: PBO:0051811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-triphosphate receptor associated 1","termid":"PBO:0051811"}


id: PBO:0088453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA C-acetyltransferase Erg10","termid":"PBO:0088453"}


id: MONDO:0014695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glioma susceptibility 9 (obsolete MONDO:0014695)","termid":"MONDO:0014695","xrefs":{"Monarch":{"xref_id":"0014695"}}}


id: SO:1000075
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant affects the editing of the transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000075 sequence_variant_affecting_editing (obsolete SO:1000075)","synonyms":[{"name":"mutation affecting editing","type":"related"},{"name":"sequence variant affecting editing","type":"exact"}],"termid":"SO:1000075"}


id: PBO:0030866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_assembly","termid":"PBO:0030866"}


id: PBO:0066477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFK pseudogene 4","termid":"PBO:0066477"}


id: GO:0030222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specializes features of an eosinophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte differentiation","termid":"GO:0030851"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil differentiation","secondary_identifiers":["GO:0035856"],"synonyms":[{"name":"eosinophil cell development","type":"related"},{"name":"eosinophil cell differentiation","type":"exact"},{"name":"eosinophil development","type":"related"}],"termid":"GO:0030222"}


id: GO:0018993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotypes in an organism's soma.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic sex determination","termid":"GO:0018993"}


id: GO:0071082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the extracellular matrix protein tenascin.","definition_xrefs":["PMID:9565552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-tenascin complex","synonyms":[{"name":"ITGA9-ITGB1-TNC complex","type":"narrow"}],"termid":"GO:0071082"}


id: PR:Q4ZGE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8C9.19 gene.","definition_xrefs":["UniProtKB:Q4ZGE1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0618 protein C8C9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.19","synonyms":[{"name":"Spom972h-SPAC8C9.19","type":"exact"}],"termid":"PR:Q4ZGE1"}


id: PBO:0057968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689a","termid":"PBO:0057968"}


id: PBO:0042316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD34 molecule","termid":"PBO:0042316"}


id: PR:O13704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C13F5.05, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.05","synonyms":[{"name":"Spom972h-mpd1","type":"exact"}],"termid":"PR:O13704"}


id: FYPO:0007253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding to a lipid in a membrane by a gene product does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished lipid binding","termid":"FYPO:0006937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished membrane lipid binding","synonyms":[{"name":"abolished binding to lipid in membrane","type":"exact"},{"name":"membrane lipid binding abolished","type":"exact"}],"termid":"FYPO:0007253"}


id: GO:0032827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell differentiation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell differentiation","termid":"GO:0032824"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation involved in immune response","termid":"GO:0032826"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"natural killer cell differentiation involved in immune response","termid":"GO:0002325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell differentiation involved in immune response","synonyms":[{"name":"down regulation of natural killer cell differentiation during immune response","type":"related"},{"name":"down-regulation of natural killer cell differentiation during immune response","type":"related"},{"name":"downregulation of natural killer cell differentiation during immune response","type":"related"},{"name":"inhibition of natural killer cell differentiation during immune response","type":"narrow"},{"name":"negative regulation of NK cell differentiation during immune response","type":"related"},{"name":"negative regulation of natural killer cell development involved in immune response","type":"related"},{"name":"negative regulation of natural killer cell differentiation during immune response","type":"related"}],"termid":"GO:0032827"}


id: PBO:0082794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U4/U6.U5 snRNP complex; involved in mRNA splicing via spliceosome","termid":"PBO:0082794"}


id: MONDO:0014256
data:
  {"annotated_genes":["SJAG_03592"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85603],"is_not":false,"summary":null,"term":"MONDO:0014256"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the NEK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 67","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15988","DOID:0110359","OMIM:615565","UMLS:C3809954","MEDGEN:816284","ICD10CM:H35.5"],"synonyms":[{"name":"NEK2 retinitis pigmentosa","type":"exact"},{"name":"RP67","type":"exact"},{"name":"retinitis pigmentosa 67","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in NEK2","type":"exact"},{"name":"retinitis pigmentosa type 67","type":"exact"}],"termid":"MONDO:0014256","terms_by_termid":{"MONDO:0014256":null},"xrefs":{"Monarch":{"xref_id":"0014256"}}}


id: GO:0071917
data:
  {"annotated_genes":["SJAG_04406","SJAG_00276","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92878,93112,112008],"is_not":false,"summary":null,"term":"GO:0071917"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a triose phosphate from one side of a membrane to the other.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null,"SJAG_04406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"triose-phosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071917","terms_by_termid":{"GO:0071917":null}}


id: FYPO:0007135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the number of apurinic and ayprimidinic (collectively, AP) sites detected in DNA is greater than normal. An AP is a deoxyribose sugar with a missing base, and is formed by the enzymatic removal of a damaged base.","definition_xrefs":["PMID:12810074","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"increased level of AP sites in DNA","synonyms":[{"name":"increased level of DNA AP sites","type":"exact"},{"name":"increased level of DNA apurinic/apyrimidinic sites","type":"exact"},{"name":"increased level of apurinic/apyrimidinic sites in DNA","type":"exact"}],"termid":"FYPO:0007135"}


id: PBO:0048805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 1","termid":"PBO:0048805"}


id: PR:Q9Y7K4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.02 gene.","definition_xrefs":["UniProtKB:Q9Y7K4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2A9.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.02","synonyms":[{"name":"Spom972h-SPBC2A9.02","type":"exact"}],"termid":"PR:Q9Y7K4"}


id: PBO:0042088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 157","termid":"PBO:0042088"}


id: GO:0035205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lamellocyte differentiation. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellocyte differentiation","termid":"GO:0035203"},{"relation_name":"is_a","term_name":"positive regulation of hemocyte differentiation","termid":"GO:0045612"},{"relation_name":"positively_regulates","term_name":"lamellocyte differentiation","termid":"GO:0035171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lamellocyte differentiation","synonyms":[{"name":"activation of lamellocyte differentiation","type":"narrow"},{"name":"stimulation of lamellocyte differentiation","type":"narrow"},{"name":"up regulation of lamellocyte differentiation","type":"exact"},{"name":"up-regulation of lamellocyte differentiation","type":"exact"},{"name":"upregulation of lamellocyte differentiation","type":"exact"}],"termid":"GO:0035205"}


id: MONDO:0012554
data:
  {"annotated_genes":["SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85457],"is_not":false,"summary":null,"term":"MONDO:0012554"}]},"cv_name":"mondo","definition":"Any COFS syndrome in which the cause of the disease is a mutation in the ERCC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COFS syndrome","termid":"MONDO:0008926"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02828":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0006025","MONDO:0021190"],"is_obsolete":false,"name":"cerebrooculofacioskeletal syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1853100","GARD:15498","DOID:0080914","MESH:C565184","NCIT:C173104","OMIM:610758","MEDGEN:342798"],"synonyms":[{"name":"COFS syndrome caused by mutation in ERCC1","type":"exact"},{"name":"COFS4","type":"exact"},{"name":"ERCC1 COFS syndrome","type":"exact"},{"name":"cerebrooculofacioskeletal syndrome 4","type":"exact"},{"name":"cerebrooculofacioskeletal syndrome type 4","type":"exact"}],"termid":"MONDO:0012554","terms_by_termid":{"MONDO:0012554":null},"xrefs":{"Monarch":{"xref_id":"0012554"}}}


id: PBO:0064177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XD, pseudogene","termid":"PBO:0064177"}


id: PBO:0081921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 890, pseudogene","termid":"PBO:0081921"}


id: GO:1903689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of wound healing, spreading of epidermal cells.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:18394891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"regulates","term_name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of wound healing, spreading of epidermal cells","termid":"GO:1903689"}


id: GO:0097710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the viral terminase complex that acts as a phage DNA-recognition component and regulates the activity of the large subunit. The small subunit usually assembles as a heterooligomer with the large subunit.","definition_xrefs":["PMID:18687036","GOC:ch","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"viral terminase complex","termid":"GO:0043493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"viral terminase, small subunit","synonyms":[{"name":"virus terminase, small subunit","type":"exact"}],"termid":"GO:0097710"}


id: PR:O14214
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA methyltransferase 10 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01012","PANTHER:PTHR13563:SF6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(9)-N1)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.09","secondary_identifiers":["UniProtKB:O14214"],"synonyms":[{"name":"Spom972h-TRMT10A","type":"exact"},{"name":"tRNA methyltransferase 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1G9)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1G9)MTase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14214"}


id: GO:1902162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.","definition_xrefs":["PMID:17719541","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (obsolete GO:1902162)","termid":"GO:1902162"}


id: MONDO:0005079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually exophytic mass attached to the underlying tissue by a broad base or a thin stalk. Polyps can be neoplastic or non-neoplastic. Neoplastic polyps usually represent proliferations of the epithelium, and are commonly seen in the gastrointestinal tract. Polyps of the gastrointestinal tract are often called adenomas, are associated with dysplasia, and may eventually transform into carcinomas. Non-neoplastic polyps may be inflammatory, degenerative, or the result of malformations.","definition_xrefs":["NCIT:C3340"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"cancer or benign tumor","termid":"MONDO:0045024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp","secondary_identifiers":["MEDGEN:19397","ICD10CM:N84","SCTID:441456002","MESH:D011127","EFO:0000662","UMLS:C0032584"],"synonyms":[{"name":"polyp","type":"exact"}],"termid":"MONDO:0005079","xrefs":{"Monarch":{"xref_id":"0005079"}}}


id: GO:0007081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic sister-chromatid adhesion release (obsolete GO:0007081)","synonyms":[{"name":"mitotic sister-chromatid adhesion release","type":"exact"}],"termid":"GO:0007081"}


id: PBO:0063510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDS5B divergent transcript","termid":"PBO:0063510"}


id: GO:1904492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Ac-Asp-Glu.","definition_xrefs":["GO_REF:0000067","PMID:24863754","GOC:BHF","GOC:hal","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"oligopeptide binding","termid":"GO:1900750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Ac-Asp-Glu binding","termid":"GO:1904492"}


id: GO:1905954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lipid localization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17564681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of lipid localization","termid":"GO:1905952"},{"relation_name":"positively_regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid localization","synonyms":[{"name":"activation of lipid localisation","type":"narrow"},{"name":"activation of lipid localization","type":"narrow"},{"name":"positive regulation of lipid localisation","type":"exact"},{"name":"up regulation of lipid localisation","type":"exact"},{"name":"up regulation of lipid localization","type":"exact"},{"name":"up-regulation of lipid localisation","type":"exact"},{"name":"up-regulation of lipid localization","type":"exact"},{"name":"upregulation of lipid localisation","type":"exact"},{"name":"upregulation of lipid localization","type":"exact"}],"termid":"GO:1905954"}


id: PBO:0068114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 421","termid":"PBO:0068114"}


id: PBO:0051828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 3","termid":"PBO:0051828"}


id: PBO:0087957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane osmosensor for filamentous growth and HOG pathways; involved in activation of the Cdc42p- and MAP kinase-dependent filamentous growth pathway and the high-osmolarity glycerol (HOG) response pathway; phosphorylated by Hog1p; interacts with Pbs2p, Msb2p, Hkr1p, and Ste11p","termid":"PBO:0087957"}


id: GO:0009443
data:
  {"annotated_genes":["SJAG_01383","SJAG_00707","SJAG_00252"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74983,77931],"is_not":false,"summary":null,"term":"GO:0009443"},{"annotations":[111573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"Any process that generates pyridoxal 5'-phosphate, the active form of vitamin B6, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal phosphate biosynthetic process","termid":"GO:0042823"},{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00707":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"pyridoxal 5'-phosphate salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PLPSAL-PWY"],"synonyms":[{"name":"pyridoxal 5' phosphate salvage","type":"exact"}],"termid":"GO:0009443","terms_by_termid":{"GO:0009443":null,"GO:0010144":null}}


id: MONDO:0000356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Walker-Warburg syndrome (obsolete MONDO:0000356)","termid":"MONDO:0000356","xrefs":{"Monarch":{"xref_id":"0000356"}}}


id: PBO:0083078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dipeptidyl-peptidase III; cleaves dipeptides from the amino terminus of target proteins; highly active on synthetic substrate Arg-Arg-2-naphthylamide; mammalian ortholog may be a biomarker for some cancers","termid":"PBO:0083078"}


id: PBO:0035738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methylation_during_vegetative_growth","termid":"PBO:0035738"}


id: MONDO:0006822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Klatskin's tumor (obsolete MONDO:0006822)","termid":"MONDO:0006822","xrefs":{"Monarch":{"xref_id":"0006822"}}}


id: MONDO:0100297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies","termid":"MONDO:0031439"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies 1","secondary_identifiers":["MEDGEN:1778119","OMIM:617877","UMLS:C5542952"],"synonyms":[{"name":"SSFSC","type":"related"},{"name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies","type":"related"}],"termid":"MONDO:0100297","xrefs":{"Monarch":{"xref_id":"0100297"}}}


id: PBO:0040087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase G","termid":"PBO:0040087"}


id: MONDO:0021765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting a nerve root. Patients experience pain radiating along a nerve path because of spinal pressure on the nerve root that connects to the nerve path.","definition_xrefs":["NCIT:C78581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiculitis","secondary_identifiers":["MEDGEN:11099","ICD9:729.2","SCTID:82473003","UMLS:C0034544"],"synonyms":[{"name":"Inflammation, Nerve Root","type":"related"},{"name":"Nerve Root Inflammation","type":"related"},{"name":"Nerve Root Inflammations","type":"related"},{"name":"Radiculitides","type":"related"},{"name":"Radiculitis","type":"related"},{"name":"radiculitis","type":"exact"}],"termid":"MONDO:0021765","xrefs":{"Monarch":{"xref_id":"0021765"}}}


id: MONDO:0958350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lipomatous, dysraphic malformation characterized by lipoma located wholly or partially at the conus.","definition_xrefs":["Orphanet:645367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphic spinal cord lipoma","termid":"MONDO:0958260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"conus spinal cord lipoma","secondary_identifiers":["UMLS:C5816712","MEDGEN:1853144"],"termid":"MONDO:0958350","xrefs":{"Monarch":{"xref_id":"0958350"}}}


id: MONDO:0011922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acquired neutropenia (obsolete MONDO:0015822)","termid":"MONDO:0015822"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonimmune chronic idiopathic neutropenia of adults","secondary_identifiers":["MEDGEN:375050","MESH:C564320","ICD10CM:D70","Orphanet:2688","GARD:16605","UMLS:C1842930","OMIM:607847"],"synonyms":[{"name":"NI-CINA","type":"exact"},{"name":"adult idiopathic neutropenia","type":"exact"},{"name":"neutropenia, nonimmune chronic idiopathic, of adults","type":"exact"},{"name":"nonimmune chronic idiopathic neutropenia of adults","type":"exact"}],"termid":"MONDO:0011922","xrefs":{"Monarch":{"xref_id":"0011922"}}}


id: GO:0010406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cell wall arabinogalactan II glycoprotein, which is composed of a group of core protein containing Hyp, Ala, Ser, Thr and Gly as the major amino acid constituents, and the C-terminus is GPI anchored.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinogalactan protein metabolic process","termid":"GO:0010405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"classical arabinogalactan protein metabolic process","synonyms":[{"name":"classical-arabinogalactan protein metabolism","type":"exact"}],"termid":"GO:0010406"}


id: PBO:0011969
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YLL042C","termid":"PBO:0011969"}


id: PBO:0004503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght2","termid":"PBO:0004503"}


id: GO:0007238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of Pbs2 (obsolete GO:0007238)","synonyms":[{"name":"activation of Pbs2","type":"exact"}],"termid":"GO:0007238"}


id: PBO:0059795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 21","termid":"PBO:0059795"}


id: PBO:0057552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 665","termid":"PBO:0057552"}


id: GO:1900384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of flavonol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flavonoid biosynthetic process","termid":"GO:0009962"},{"relation_name":"regulates","term_name":"flavonol biosynthetic process","termid":"GO:0051555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of flavonol biosynthetic process","termid":"GO:1900384"}


id: MONDO:0005985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the togaviridae.","definition_xrefs":["MESH:D014036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Togaviridae infectious disease","secondary_identifiers":["MEDGEN:21575","UMLS:C0040361"],"synonyms":[{"name":"Togaviridae caused disease or disorder","type":"exact"},{"name":"Togaviridae disease or disorder","type":"exact"}],"termid":"MONDO:0005985","xrefs":{"Monarch":{"xref_id":"0005985"}}}


id: GO:0019865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"immunoglobulin binding","termid":"GO:0019865"}


id: GO:0045727
data:
  {"annotated_genes":["SJAG_01249","SJAG_02723","SJAG_02812","SJAG_01047","SJAG_02043","SJAG_03550","SJAG_01436","SJAG_01517","SJAG_05265","SJAG_02189"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69526,106412,116871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[98462,112419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[100217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[68356,65978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[72579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[68357,65979,76230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"translation","termid":"GO:0006412"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01047":null,"SJAG_01249":null,"SJAG_01436":null,"SJAG_01517":null,"SJAG_02043":null,"SJAG_02189":null,"SJAG_02723":null,"SJAG_02812":null,"SJAG_03550":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0045946"],"synonyms":[{"name":"activation of protein biosynthetic process","type":"narrow"},{"name":"positive regulation of protein anabolism","type":"exact"},{"name":"positive regulation of protein biosynthesis","type":"exact"},{"name":"positive regulation of protein biosynthetic process","type":"exact"},{"name":"positive regulation of protein formation","type":"exact"},{"name":"positive regulation of protein synthesis","type":"exact"},{"name":"stimulation of protein biosynthetic process","type":"narrow"},{"name":"up regulation of protein biosynthetic process","type":"exact"},{"name":"up-regulation of protein biosynthetic process","type":"exact"},{"name":"upregulation of protein biosynthetic process","type":"exact"}],"termid":"GO:0045727","terms_by_termid":{"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0070131":null,"GO:0070134":null,"GO:2000767":null}}


id: RO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_before","termid":"RO:0002089"}


id: GO:0035772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-13 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-13","termid":"GO:0035963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-13-mediated signaling pathway","synonyms":[{"name":"IL-13-mediated signaling pathway","type":"exact"},{"name":"interleukin-13-mediated signalling pathway","type":"exact"}],"termid":"GO:0035772"}


id: GO:0036288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ximelagatran stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ximelagatran","termid":"GO:0036288"}


id: PBO:0071032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 34","termid":"PBO:0071032"}


id: GO:0004335
data:
  {"annotated_genes":["SJAG_02950"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77028],"is_not":false,"summary":null,"term":"GO:0004335"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + ATP = alpha-D-galactose 1-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.6","RHEA:13553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"galactokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70355","Reactome:R-HSA-5610026","MetaCyc:GALACTOKIN-RXN","KEGG_REACTION:R01092"],"synonyms":[{"name":"ATP:D-galactose 1-phosphotransferase activity","type":"related"},{"name":"ATP:D-galactose-1-phosphotransferase activity","type":"related"},{"name":"galactokinase (phosphorylating)","type":"related"}],"termid":"GO:0004335","terms_by_termid":{"GO:0004335":null}}


id: GO:0051679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["LIGAND:C03367","PubChem_Compound:439991","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"6-alpha-maltosylglucose metabolic process","synonyms":[{"name":"6-alpha-maltosylglucose metabolism","type":"exact"},{"name":"isopanose metabolic process","type":"exact"},{"name":"isopanose metabolism","type":"exact"}],"termid":"GO:0051679"}


id: PBO:0117011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNA6 antisense RNA 1","termid":"PBO:0117011"}


id: MONDO:0850069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency-associated lymphoproliferative disease","termid":"MONDO:0020083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial hyperinflammatory lymphoproliferative immunodeficiency","secondary_identifiers":["MEDGEN:1842618","GARD:22466","Orphanet:619953","UMLS:C5680415"],"termid":"MONDO:0850069","xrefs":{"Monarch":{"xref_id":"0850069"}}}


id: PR:P04551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal-type cyclin-dependent kinase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA","UniProtKB:P04551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"CDK1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc2","type":"exact"},{"name":"cdk1","type":"related"},{"name":"cell division control protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cell division protein kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p34 protein kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi002, SPBC11B10.09","type":"related"},{"name":"swo2","type":"related"}],"termid":"PR:P04551"}


id: PBO:0003349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial adenine nucleotide carrier Anc1","termid":"PBO:0003349"}


id: GO:0103047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methyl beta-D-glucoside 6-phosphate + H2O = beta-D-glucose 6-phosphate + methanol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methyl beta-D-glucoside 6-phosphate glucohydrolase activity (obsolete GO:0103047)","termid":"GO:0103047"}


id: GO:0051793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a medium-chain fatty acid. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"medium-chain fatty acid metabolic process","termid":"GO:0051791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"medium-chain fatty acid catabolic process","synonyms":[{"name":"medium chain fatty acid catabolic process","type":"exact"},{"name":"medium chain fatty acid catabolism","type":"exact"},{"name":"medium-chain fatty acid breakdown","type":"exact"},{"name":"medium-chain fatty acid catabolism","type":"exact"},{"name":"medium-chain fatty acid degradation","type":"exact"}],"termid":"GO:0051793"}


id: GO:0010183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the growth of pollen tube is directed towards the female gametophyte.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"pollen tube development","termid":"GO:0048868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube guidance","termid":"GO:0010183"}


id: GO:0140654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tryprostatin A.","definition_xrefs":["GOC:ach","PMID:19226505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tryprostatin A biosynthetic process","synonyms":[{"name":"tryprostatin A anabolism","type":"exact"},{"name":"tryprostatin A biosynthesis","type":"exact"},{"name":"tryprostatin A formation","type":"exact"},{"name":"tryprostatin A synthesis","type":"exact"}],"termid":"GO:0140654"}


id: PBO:0076477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter 2, ATP binding cassette subfamily B member","termid":"PBO:0076477"}


id: PBO:0050081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 1","termid":"PBO:0050081"}


id: PATO:0000218
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000218 repair function (obsolete PATO:0000218)","termid":"PATO:0000218"}


id: PBO:0084904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial type 2C protein phosphatase (PP2C); has similarity to mammalian PP1Ks; involved in mitophagy; null mutant is sensitive to rapamycin and has decreased phosphorylation of the Pda1 subunit of pyruvate dehydrogenase","termid":"PBO:0084904"}


id: MONDO:0016462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated agammaglobulinemia (IA) is the non-syndromic form of agammaglobulinemia, a primary immunodeficiency disease, and is characterized by deficient gamma globulins and associated predisposition to frequent and recurrent infections from infancy.","definition_xrefs":["Orphanet:229717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"isolated agammaglobulinemia","secondary_identifiers":["GARD:17155","SCTID:764858009","UMLS:C4707181","MEDGEN:1639972"],"synonyms":[{"name":"isolated hypogammaglobulinemia","type":"exact"},{"name":"nonsyndromic agammaglobulinemia","type":"exact"}],"termid":"MONDO:0016462","xrefs":{"Monarch":{"xref_id":"0016462"}}}


id: GO:0030263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The compaction of chromatin during apoptosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"part_of","term_name":"apoptotic nuclear changes","termid":"GO:0030262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic chromosome condensation","secondary_identifiers":["Wikipedia:Pyknosis"],"synonyms":[{"name":"pyknosis","type":"exact"}],"termid":"GO:0030263"}


id: MONDO:0015426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Desbuquois syndrome (DBQD) is an osteochondrodysplasia characterized by severe micromelic dwarfism, facial dysmorphism, joint laxity with multiple dislocations, vertebral and metaphyseal abnormalities and advanced carpotarsal ossification. Two forms have been distinguished on the basis of the presence (type 1) or the absence (type 2) of characteristic hand anomalies. A variant form of DBQD, Kim variant, has also been described and is characterized by short stature and articular, minor facial and significant hand anomalies.","definition_xrefs":["Orphanet:1425"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Desbuquois dysplasia","secondary_identifiers":["OMIMPS:251450","MEDGEN:98479","GARD:1818","DOID:0060462","SCTID:254099008","ICD9:756.9","NCIT:C124056","UMLS:C0432242"],"synonyms":[{"name":"DBQD","type":"exact"},{"name":"Desbuquois dysplasia","type":"exact"},{"name":"desbuquois syndrome","type":"exact"},{"name":"micromelic dwarfism with vertebral and metaphyseal abnormalities and advanced carpotarsal ossification","type":"exact"},{"name":"micromelic dwarfism, narrow chest, vertebral and metaphyseal abnormalities and advanced carpotarsal ossification","type":"related"}],"termid":"MONDO:0015426","xrefs":{"Monarch":{"xref_id":"0015426"}}}


id: PBO:0080097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undifferentiated embryonic cell transcription factor 1","termid":"PBO:0080097"}


id: MONDO:0014691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome in which the cause of the disease is a mutation in the SOS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome 9","secondary_identifiers":["DOID:0060587","UMLS:C4225282","OMIM:616559","MEDGEN:896352","GARD:16137","NCIT:C176937"],"synonyms":[{"name":"NS9","type":"exact"},{"name":"Noonan syndrome 9","type":"exact"},{"name":"Noonan syndrome caused by mutation in SOS2","type":"exact"},{"name":"Noonan syndrome type 9","type":"exact"},{"name":"SOS2 Noonan syndrome","type":"exact"}],"termid":"MONDO:0014691","xrefs":{"Monarch":{"xref_id":"0014691"}}}


id: PBO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kip3 subfamily","termid":"PBO:0003230"}


id: PBO:0059638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 4","termid":"PBO:0059638"}


id: PBO:0061911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily AC member 1 pseudogene","termid":"PBO:0061911"}


id: PBO:0066261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 1","termid":"PBO:0066261"}


id: PBO:0030917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_morphology","termid":"PBO:0030917"}


id: GO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of leukocyte mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","PMID:11911826","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"negative regulation of cell killing","termid":"GO:0031342"},{"relation_name":"negatively_regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"down regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"down-regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"downregulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"inhibition of leukocyte mediated cytotoxicity","type":"narrow"},{"name":"negative regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"negative regulation of leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001911"}


id: GO:0034455
data:
  {"annotated_genes":["SJAG_02702","SJAG_05187","SJAG_02608","SJAG_01764","SJAG_00879","SJAG_03341"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72750,75846,88996,91807,92402,110317],"is_not":false,"summary":null,"term":"GO:0034455"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a subcomplex of the 90S preribosome and is required for the subsequent assembly of the rest of the preribosome. In S. cerevisiae, it is composed of Utp5p, Utp4p, Nan1p, Utp8p, Utp9p, Utp10 and Utp15p.","definition_xrefs":["GOC:mah","GOC:vw","GOC:krc","PMID:17515605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00879":null,"SJAG_01764":null,"SJAG_02608":null,"SJAG_02702":null,"SJAG_03341":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005730","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"t-UTP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Nan1p-containing subcomplex of 90S preribosome","type":"exact"}],"termid":"GO:0034455","terms_by_termid":{"GO:0034455":null}}


id: MONDO:0006920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which blood glucose levels are high, but not high enough to be classified as type 2 diabetes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"prediabetes syndrome","secondary_identifiers":["EFO:1001121","UMLS:C0362046","MEDGEN:83928","DOID:11716","MedDRA:10065542","MESH:D011236","NCIT:C122685"],"synonyms":[{"name":"borderline diabetes","type":"exact"},{"name":"prediabetes","type":"exact"},{"name":"prediabetic state","type":"exact"}],"termid":"MONDO:0006920","xrefs":{"Monarch":{"xref_id":"0006920"}}}


id: PBO:0086587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm; YHR033W has a paralog, PRO1, that arose from the whole genome duplication","termid":"PBO:0086587"}


id: GO:0012505
data:
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id: GO:0072737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diamide (N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diamide","synonyms":[{"name":"response to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"}],"termid":"GO:0072737"}


id: GO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a sodium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"sodium channel regulator activity","termid":"GO:0017080"}


id: GO:0044517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the activity of a vasoactive intestinal polypeptide receptor in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of vasoactive intestinal polypeptide receptor activity in another organism (obsolete GO:0044517)","synonyms":[{"name":"modulation of VIP receptor activity in other organism","type":"exact"},{"name":"modulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"},{"name":"regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044517"}


id: PBO:0016091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin family protein Plp2 (predicted)","termid":"PBO:0016091"}


id: PBO:0042000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 51","termid":"PBO:0042000"}


id: GO:0051691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages, as carried out by individual cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular oligosaccharide metabolic process (obsolete GO:0051691)","synonyms":[{"name":"cellular oligosaccharide metabolism","type":"exact"}],"termid":"GO:0051691"}


id: GO:1901923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sclerotium development.","definition_xrefs":["PMID:21148914","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of sclerotium development","termid":"GO:1901922"},{"relation_name":"negatively_regulates","term_name":"sclerotium development","termid":"GO:1990045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sclerotium development","synonyms":[{"name":"down regulation of sclerotium development","type":"exact"},{"name":"down-regulation of sclerotium development","type":"exact"},{"name":"downregulation of sclerotium development","type":"exact"},{"name":"inhibition of sclerotium development","type":"narrow"}],"termid":"GO:1901923"}


id: GO:0019325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fructose that occurs in the absence of oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete anaerobic fructose catabolic process (obsolete GO:0019325)","synonyms":[{"name":"anaerobic fructose breakdown","type":"exact"},{"name":"anaerobic fructose catabolism","type":"exact"},{"name":"anaerobic fructose degradation","type":"exact"}],"termid":"GO:0019325"}


id: PBO:0110430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VTCN1 pseudogene 1","termid":"PBO:0110430"}


id: PR:O94303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his4 gene.","definition_xrefs":["UniProtKB:O94303","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazole glycerol phosphate synthase hisHF (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC418.01c","synonyms":[{"name":"IGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IGPS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ImGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-his4","type":"exact"}],"termid":"PR:O94303"}


id: PBO:0040501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase B","termid":"PBO:0040501"}


id: MONDO:0010969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the PITPNM3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 5","secondary_identifiers":["OMIM:600977","DOID:0111010","GARD:10655","UMLS:C1832976","MESH:C563415","MEDGEN:322083"],"synonyms":[{"name":"CORD5","type":"exact"},{"name":"PITPNM3 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 5","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in PITPNM3","type":"exact"},{"name":"cone-rod dystrophy type 5","type":"exact"}],"termid":"MONDO:0010969","xrefs":{"Monarch":{"xref_id":"0010969"}}}


id: PR:P87027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septum-promoting GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.06c","synonyms":[{"name":"GTPase spg1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spg1","type":"exact"},{"name":"sid3 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87027"}


id: PR:O94452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.10","synonyms":[{"name":"Spom972h-mcp1","type":"exact"}],"termid":"PR:O94452"}


id: GO:1990577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a methyl group from the C-terminal amino acid of a protein.","definition_xrefs":["PMID:11060018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein demethylation","termid":"GO:0006482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein demethylation","termid":"GO:1990577"}


id: PBO:0048707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine receptor alpha 4 (pseudogene)","termid":"PBO:0048707"}


id: PBO:0075445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastin","termid":"PBO:0075445"}


id: PBO:0002503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp3 (predicted)","termid":"PBO:0002503"}


id: PBO:0005434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation regulator (predicted)","termid":"PBO:0005434"}


id: PBO:0080298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 62 pseudogene","termid":"PBO:0080298"}


id: MONDO:0014020
data:
  {"annotated_genes":["SJAG_00308"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85055],"is_not":false,"summary":null,"term":"MONDO:0014020"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00308":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"hereditary spastic paraplegia 55","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:761342","OMIM:615035","DOID:0110807","SCTID:723825006","GARD:17474","Orphanet:320375","UMLS:C3539506"],"synonyms":[{"name":"SPG55","type":"exact"},{"name":"autosomal recessive spastic paraplegia 55","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 55","type":"exact"},{"name":"hereditary spastic paraplegia type 55","type":"exact"},{"name":"spastic paraplegia 55, autosomal recessive","type":"related"}],"termid":"MONDO:0014020","terms_by_termid":{"MONDO:0014020":null},"xrefs":{"Monarch":{"xref_id":"0014020"}}}


id: FYPO:0003755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that shows detectable differences from normal at the level of an individual cell, when the cell is in the vegetative growth phase of the cell cycle. In fission yeast, the characteristics of wild type cells of the sequenced strain (972 h-) or the isogenic h+ or h90 strains are regarded as normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"inheres_in","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal vegetative cell phenotype","synonyms":[{"name":"abnormal cell phenotype during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell phenotype during mitotic cell cycle","type":"related"},{"name":"abnormal vegetative fission yeast cell phenotype","type":"exact"}],"termid":"FYPO:0003755"}


id: FYPO:0005020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of actomyosin contractile ring contraction is normal (i.e. indistinguishable from wild type). Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["PomBase:mah","GO:1902404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring contraction","termid":"FYPO:0004097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of actomyosin contractile ring contraction","synonyms":[{"name":"normal duration of actomyosin contractile ring constriction","type":"exact"},{"name":"normal duration of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"normal duration of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"normal duration of contractile ring contraction","type":"exact"},{"name":"normal duration of cytokinetic contractile ring contraction","type":"exact"},{"name":"normal duration of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"normal duration of mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0005020"}


id: PATO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000485 mild response (obsolete PATO:0000485)","termid":"PATO:0000485"}


id: GO:0006740
data:
  {"annotated_genes":["SJAG_02148","SJAG_03934","SJAG_04263","SJAG_00070","SJAG_03174","SJAG_00633","SJAG_02696","SJAG_01824","SJAG_00685","SJAG_00501","SJAG_03852","SJAG_05314","SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006098"},{"annotations":[74286,72891,108183,104110,73569],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[96650,80131,97941,72862,96739],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0009051"},{"annotations":[89451],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[75817],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"A metabolic process that generates a pool of NADPH by the reduction of NADP+.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"NADP metabolic process","termid":"GO:0006739"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_01824":null,"SJAG_02148":null,"SJAG_02297":null,"SJAG_02696":null,"SJAG_03174":null,"SJAG_03852":null,"SJAG_03934":null,"SJAG_04263":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"NADPH regeneration","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-389542"],"synonyms":[{"name":"NADP (reduced) regeneration","type":"exact"},{"name":"reduced NADP regeneration","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate regeneration","type":"exact"}],"termid":"GO:0006740","terms_by_termid":{"GO:0006098":null,"GO:0009051":null,"GO:0009052":null,"GO:0043456":null,"GO:1905857":null}}


id: MONDO:0009991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rh deficiency syndrome (obsolete MONDO:0009991)","termid":"MONDO:0009991","xrefs":{"Monarch":{"xref_id":"0009991"}}}


id: GO:0043152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which infecting bacteria are clumped together by a host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibacterial humoral response","termid":"GO:0019731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of bacterial agglutination","termid":"GO:0043152"}


id: GO:1903495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dehydroepiandrosterone stimulus.","definition_xrefs":["GO_REF:0000071","PMID:3585228","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to dehydroepiandrosterone","termid":"GO:1903494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dehydroepiandrosterone","termid":"GO:1903495"}


id: GO:1900776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving fumiquinazoline A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline A metabolic process (obsolete GO:1900776)","synonyms":[{"name":"fumiquinazoline A metabolism","type":"exact"}],"termid":"GO:1900776"}


id: PBO:0058210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4502","termid":"PBO:0058210"}


id: PBO:0003453
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.15","termid":"PBO:0003453"}


id: PBO:0082500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of Dcp1p-Dcp2p decapping enzyme complex; removes 5' cap structure from mRNAs prior to their degradation; also enters nucleus and positively regulates transcription initiation; nudix hydrolase family member; forms cytoplasmic foci upon DNA replication stress; human homolog DCP2 complements yeast dcp2 thermosensitive mutant","termid":"PBO:0082500"}


id: PATO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located further from a more centrally located entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal to","synonyms":[{"name":"distal","type":"exact"}],"termid":"PATO:0001234"}


id: GO:0008719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroneopterin 3'-triphosphate = 7,8-dihydromonapterin 3'-triphosphate.","definition_xrefs":["RHEA:28346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"dihydroneopterin triphosphate 2'-epimerase activity","secondary_identifiers":["EC:5.1.99.7","MetaCyc:H2NTPEPIM-RXN"],"synonyms":[{"name":"D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase activity","type":"exact"}],"termid":"GO:0008719"}


id: MONDO:0700053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Viral infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease, non-human animal","termid":"MONDO:0700049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral infectious disease, non-human animal","termid":"MONDO:0700053","xrefs":{"Monarch":{"xref_id":"0700053"}}}


id: PBO:0050905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein 44","termid":"PBO:0050905"}


id: MONDO:0030360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 6","secondary_identifiers":["UMLS:C5561965","OMIM:619484","MEDGEN:1794175"],"synonyms":[{"name":"PFIC6","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 6","type":"exact"}],"termid":"MONDO:0030360","xrefs":{"Monarch":{"xref_id":"0030360"}}}


id: GO:0071816
data:
  {"annotated_genes":["SJAG_01240","SJAG_01940","SJAG_01178"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72477,74832,113871],"is_not":false,"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which a tail-anchored (TA) transmembrane protein is incorporated into an endoplasmic reticulum (ER) membrane. TA transmembrane protein, also named type II transmembrane proteins, contain a single C- terminal transmembrane region.","definition_xrefs":["GOC:mah","PMID:20676083","GOC:sp","PMID:20516149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01178":null,"SJAG_01240":null,"SJAG_01940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"tail-anchored membrane protein insertion into ER membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein insertion of tail-anchored membrane proteins into ER membrane","type":"exact"},{"name":"tail-anchored membrane protein insertion into endoplasmic reticulum membrane","type":"exact"},{"name":"type II transmembrane protein insertion into ER membrane","type":"exact"}],"termid":"GO:0071816","terms_by_termid":{"GO:0071816":null}}


id: MONDO:0021354
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the adipose tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"tumor of adipose tissue","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0206631","ICD9:239.2","SCTID:254831005","NCIT:C4248","MEDGEN:61646"],"synonyms":[{"name":"adipose tissue neoplasm","type":"exact"},{"name":"adipose tissue neoplasm (disease)","type":"exact"},{"name":"adipose tissue tumor","type":"exact"},{"name":"adipose tissue tumour","type":"exact"},{"name":"lipomatous neoplasm","type":"exact"},{"name":"lipomatous tumor","type":"exact"},{"name":"lipomatous tumour","type":"exact"},{"name":"neoplasm of adipose tissue","type":"exact"},{"name":"neoplasm of the adipose tissue","type":"exact"},{"name":"tumor of adipose tissue","type":"exact"},{"name":"tumor of the adipose tissue","type":"exact"},{"name":"tumour of the adipose tissue","type":"exact"}],"termid":"MONDO:0021354","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0021354"}}}


id: GO:0140700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic G-P(3'-5')A-P(2'-5') (cyclic 3',2' GAMP).","definition_xrefs":["PMID:34261127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic GMP-AMP synthase activity","termid":"GO:0140699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"3',2'-cyclic GMP-AMP synthase activity","synonyms":[{"name":"3',2' cyclic-GMP-AMP synthase activity","type":"exact"},{"name":"3',2'-cyclic GAMP synthase activity","type":"exact"}],"termid":"GO:0140700"}


id: MONDO:0010760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete XH antigen (obsolete MONDO:0010760)","secondary_identifiers":["UMLS:C3887689","MEDGEN:854528"],"termid":"MONDO:0010760","xrefs":{"Monarch":{"xref_id":"0010760"}}}


id: GO:1904244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["PMID:12771515","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of pancreatic trypsinogen secretion","termid":"GO:1904242"},{"relation_name":"positively_regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"activation of pancreatic trypsinogen release","type":"narrow"},{"name":"activation of pancreatic trypsinogen secretion","type":"narrow"},{"name":"positive regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"up-regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up-regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"upregulation of pancreatic trypsinogen release","type":"exact"},{"name":"upregulation of pancreatic trypsinogen secretion","type":"exact"}],"termid":"GO:1904244"}


id: GO:0070280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methylpyridine-4-carbaldehyde, a form of vitamin B6.","definition_xrefs":["CHEBI:17310","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyridoxal binding","termid":"GO:0070280"}


id: PBO:0074702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 71B","termid":"PBO:0074702"}


id: GO:0071040
data:
  {"annotated_genes":["SJAG_03745","SJAG_01176","SJAG_01717"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70474,88133,106026],"is_not":false,"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of an antisense transcript, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target antisense transcript.","definition_xrefs":["PMID:18022365","GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antisense RNA transcript catabolic process","termid":"GO:0071041"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01717":null,"SJAG_03745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent antisense transcript catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent antisense transcript catabolic process","type":"related"}],"termid":"GO:0071040","terms_by_termid":{"GO:0071040":null}}


id: PBO:0079078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-6","termid":"PBO:0079078"}


id: GO:0140990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in converting precursor piRNAs into non-overlapping, contiguous primary piRNAs (approximately 24-30-nt piRNAs with a preference for a 5' uridine (U) via the endonucleolytic activity of cytosolic PIWI. This may include pre-piRNA maturation of 3' ends by trimming and 2'-O-methylation.","definition_xrefs":["PMID:34469728","PMID:22907665","PMID:26166577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA processing","termid":"GO:0034587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"primary piRNA processing","termid":"GO:0140990"}


id: SO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"TRIM elements have terminal direct repeat sequences of 100-250 bp in length that flank an internal domain of 100–300 bp. TRIMs lack coding domains and thus do not encode proteins.","definition_xrefs":["PMID:11717436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM","synonyms":[{"name":"terminal-repeat retrotransposons in miniature","type":"exact"},{"name":"terminal-repeat_retrotransposons_in_miniature","type":"exact"}],"termid":"SO:0002261"}


id: PBO:0047053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 114 member A1","termid":"PBO:0047053"}


id: GO:0009896
data:
  {"annotated_genes":["SJAG_00686","SJAG_02036","SJAG_04880","SJAG_04682","SJAG_04006","SJAG_01818","SJAG_01436","SJAG_04990","SJAG_01625","SJAG_02433","SJAG_00966","SJAG_01131","SJAG_03179","SJAG_04350","SJAG_01944","SJAG_03597","SJAG_16457","SJAG_05289","SJAG_02765","SJAG_05346","SJAG_00712","SJAG_01521","SJAG_00759","SJAG_00824","SJAG_04435","SJAG_02723","SJAG_04502","SJAG_01053","SJAG_00642","SJAG_04407","SJAG_00071","SJAG_01489","SJAG_01184","SJAG_03851","SJAG_02239","SJAG_01716","SJAG_01191","SJAG_05694","SJAG_04825","SJAG_01544","SJAG_04321","SJAG_03113","SJAG_04496","SJAG_03883","SJAG_04477","SJAG_00766","SJAG_05322","SJAG_03699","SJAG_02383","SJAG_04118","SJAG_04818","SJAG_00343","SJAG_03876","SJAG_01910","SJAG_00391","SJAG_05010","SJAG_03745","SJAG_02808","SJAG_04249","SJAG_04824","SJAG_01210","SJAG_04084","SJAG_03157","SJAG_00285","SJAG_00704","SJAG_02622","SJAG_04153","SJAG_05000","SJAG_02540","SJAG_03048","SJAG_00854","SJAG_02370","SJAG_01696","SJAG_02213","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[77221,58511,79492,74140,111749,75618],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[117852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[91433],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[97003,106224,95672,92011,104158,92842,118043,101836,105023,115628,107210,115187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[97895,79258,114888,76390,59967,70297,97809,99689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[77401,78751,79429,90546,75352,92265,92363,94095,115401,116345,70113,89546,73608,95265],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[91434],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[90547,66334,116972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[88705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[108319,108409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[97379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[109424,73362,114325,111589,99205,79724,73389,98636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010508"},{"annotations":[68697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[75085,106019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[106414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[72586,89457,104676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"},{"annotations":[65544,61445,68057,68400,67031,66808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[116814,111460,108648,102134,106415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[99155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"},{"annotations":[89281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"positively_regulates","term_name":"catabolic 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regulation of catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of catabolic process","type":"narrow"},{"name":"positive regulation of breakdown","type":"exact"},{"name":"positive regulation of catabolism","type":"exact"},{"name":"positive regulation of degradation","type":"exact"},{"name":"stimulation of catabolic process","type":"narrow"},{"name":"up regulation of catabolic process","type":"exact"},{"name":"up-regulation of catabolic process","type":"exact"},{"name":"upregulation of catabolic process","type":"exact"}],"termid":"GO:0009896","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0010508":null,"GO:0016239":null,"GO:0032436":null,"GO:0036450":null,"GO:0060212":null,"GO:0060213":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:0140501":null,"GO:1901098":null,"GO:1901800":null,"GO:1903599":null,"GO:1904352":null,"GO:1905786":null,"GO:1990074":null,"GO:2000786":null}}


id: PBO:0060494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylneuraminate synthase","termid":"PBO:0060494"}


id: MONDO:0005923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with species in the genus pneumocystis, a fungus causing interstitial plasma cell pneumonia (pneumonia, pneumocystis) and other infections in humans and other mammals. Immunocompromised patients, especially those with aids, are particularly susceptible to these infections. Extrapulmonary sites are rare but seen occasionally.","definition_xrefs":["MESH:D016720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pneumocystis infectious disease","secondary_identifiers":["MEDGEN:163415","EFO:0007447","UMLS:C0851886"],"synonyms":[{"name":"Pneumocystis infection","type":"exact"},{"name":"infections, Pneumocystis","type":"related"}],"termid":"MONDO:0005923","xrefs":{"Monarch":{"xref_id":"0005923"}}}


id: PBO:0080833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 1","termid":"PBO:0080833"}


id: GO:0006612
data:
  {"annotated_genes":["SJAG_01299","SJAG_00895","SJAG_01641","SJAG_02320","SJAG_01496","SJAG_02208","SJAG_01558","SJAG_01282","SJAG_03684","SJAG_02588","SJAG_00360","SJAG_03396","SJAG_02354","SJAG_01349","SJAG_03955","SJAG_00175","SJAG_01112","SJAG_00064","SJAG_01367","SJAG_00959","SJAG_01733","SJAG_01840","SJAG_04451","SJAG_02330","SJAG_02456","SJAG_01759","SJAG_03411","SJAG_04129"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60173,70869,72647,74736,74808,95656],"is_not":false,"summary":null,"term":"GO:0006612"},{"annotations":[97667,107054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006613"},{"annotations":[79181,95492,109087,69693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[97804,72968,97092,80142,108063],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[90767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[66165,94040,68702,69692,72758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[91393,114108,114873],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[73008,75221,73317,97806,108065,102335],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards a membrane, usually using signals contained within the protein.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00360":null,"SJAG_00895":null,"SJAG_00959":null,"SJAG_01112":null,"SJAG_01282":null,"SJAG_01299":null,"SJAG_01349":null,"SJAG_01367":null,"SJAG_01496":null,"SJAG_01558":null,"SJAG_01641":null,"SJAG_01733":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02208":null,"SJAG_02320":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02456":null,"SJAG_02588":null,"SJAG_03396":null,"SJAG_03411":null,"SJAG_03684":null,"SJAG_03955":null,"SJAG_04129":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein targeting to membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein membrane targeting","type":"exact"},{"name":"protein-membrane targeting","type":"exact"}],"termid":"GO:0006612","terms_by_termid":{"GO:0006612":null,"GO:0006613":null,"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0031204":null,"GO:0044395":null}}


id: MONDO:0004534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of breast adenosis characterized by the proliferation of small round glands in a collagenous stroma. The epithelial cells are cuboidal and there are no myopepithelial cells present. There is no evidence of atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenosis","termid":"MONDO:0003725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microglandular adenosis of breast","secondary_identifiers":["UMLS:C1334753","MEDGEN:233705","DOID:8335","NCIT:C5199"],"synonyms":[{"name":"breast microglandular adenosis","type":"exact"},{"name":"microglandular adenosis of the breast","type":"exact"}],"termid":"MONDO:0004534","xrefs":{"Monarch":{"xref_id":"0004534"}}}


id: GO:0008951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a palmitoleoyl-[acyl-carrier protein] + alpha-KDO-(2->4)-alpha-KDO-(2->6)-lipid IVA = KDO2-(palmitoleoyl)-lipid IVA + a holo-[acyl-carrier protein].","definition_xrefs":["MetaCyc:PALMITOTRANS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity","secondary_identifiers":["RHEA:44012"],"synonyms":[{"name":"palmitoleoyl ACP-dependent acyltransferase activity","type":"exact"}],"termid":"GO:0008951"}


id: MONDO:0017695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to glycogen branching enzyme deficiency, progressive hepatic form","secondary_identifiers":["GARD:17394","MEDGEN:1826169","Orphanet:308621","UMLS:C5679972","NANDO:2201159"],"synonyms":[{"name":"GBE deficiency, progressive hepatic form","type":"exact"},{"name":"GSD due to glycogen branching enzyme deficiency, progressive hepatic form","type":"exact"},{"name":"GSD type 4, progressive hepatic form","type":"exact"},{"name":"GSDIV, progressive hepatic form","type":"exact"},{"name":"glycogen storage disease type 4, progressive hepatic form","type":"exact"},{"name":"glycogen storage disease type IV, progressive hepatic form","type":"exact"},{"name":"glycogenosis due to glycogen branching enzyme deficiency, progressive hepatic form","type":"exact"},{"name":"glycogenosis type 4, progressive hepatic form","type":"exact"},{"name":"glycogenosis type IV, progressive hepatic form","type":"exact"}],"termid":"MONDO:0017695","xrefs":{"Monarch":{"xref_id":"0017695"}}}


id: MONDO:0001619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete relapsing fever (obsolete MONDO:0001619)","termid":"MONDO:0001619","xrefs":{"Monarch":{"xref_id":"0001619"}}}


id: GO:0072665
data:
  {"annotated_genes":["SJAG_05210","SJAG_00208","SJAG_00108","SJAG_04024","SJAG_00416","SJAG_02584","SJAG_01229","SJAG_01367","SJAG_04349","SJAG_01088","SJAG_00821","SJAG_03783","SJAG_03385","SJAG_03756","SJAG_03892","SJAG_04912","SJAG_16459","SJAG_00204","SJAG_03976","SJAG_02117","SJAG_02912","SJAG_01488","SJAG_01242","SJAG_03250","SJAG_01360","SJAG_01527","SJAG_04936","SJAG_00181","SJAG_03970","SJAG_05303","SJAG_01281","SJAG_04489","SJAG_01981","SJAG_00380","SJAG_04552","SJAG_01586"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87849,114193,105519,87884,91265,91400,90831,113053,87771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[90767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[75409,96305,77838,73834,77405,72588,70999,76972,77016,80046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[95721,109126,87718,97714,87887,78219,73118,71881,100647,71887,77444,70746,70729,106319,78003,114454,91403,73144,91268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a vacuole.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00821":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03385":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05210":null,"SJAG_05303":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to vacuole","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to vacuole","type":"exact"}],"termid":"GO:0072665","terms_by_termid":{"GO:0006623":null,"GO:0043328":null,"GO:0044395":null,"GO:0120113":null}}


id: PBO:0088941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiosulfate sulfurtransferase/rhodanese-like domain Rdl2","termid":"PBO:0088941"}


id: MOD:01678
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively coverts L-lysine to N6-carbamoyl-L-lysine.","definition_xrefs":["PubMed:10978403","PubMed:12203680","OMSSA:31","Unimod:5#K","DeltaMass:56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbamoylated residue","termid":"MOD:00398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-carbamoyl-L-lysine","synonyms":[{"name":"2-amino-6-ureido-hexanoic acid","type":"exact"},{"name":"Carbamyl","type":"related"},{"name":"Carbamylation","type":"related"},{"name":"N6-(aminocarbonyl)-L-lysine","type":"exact"},{"name":"N6CbmLys","type":"exact"},{"name":"carbamylk","type":"exact"},{"name":"homocitrulline","type":"exact"}],"termid":"MOD:01678"}


id: PBO:0076441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13","termid":"PBO:0076441"}


id: PBO:0078886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-3","termid":"PBO:0078886"}


id: MONDO:0018503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of stomach, salivary gland type","secondary_identifiers":["Orphanet:423781"],"synonyms":[{"name":"gastric carcinoma, salivary gland type","type":"exact"}],"termid":"MONDO:0018503","xrefs":{"Monarch":{"xref_id":"0018503"}}}


id: GO:0030283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + NAD(P)+ = androst-4-ene-3,17-dione + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"testosterone dehydrogenase [NAD(P)+] activity","secondary_identifiers":["Reactome:R-HSA-193064","MetaCyc:1.1.1.51-RXN"],"synonyms":[{"name":"17beta-hydroxy steroid dehydrogenase","type":"broad"},{"name":"3(or 17)beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3(or 17)beta-hydroxysteroid:NAD(P)+ oxidoreductase","type":"broad"},{"name":"3beta-hydroxy steroid dehydrogenase","type":"broad"},{"name":"3beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"beta-hydroxy steroid dehydrogenase","type":"broad"}],"termid":"GO:0030283"}


id: PBO:0051984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jagunal homolog 1","termid":"PBO:0051984"}


id: FYPO:0007601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is decreased, and the protein is instead visible diffusely localized in the cytoplasm.","definition_xrefs":["PomBase:mah","PMID:33138913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitochondrion","termid":"FYPO:0007038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization","synonyms":[{"name":"decreased protein localisation to mitochondrion, with diffuse cytoplasmic protein mislocalisation","type":"exact"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic localization","type":"exact"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization","type":"exact"}],"termid":"FYPO:0007601"}


id: MONDO:0007067
data:
  {"annotated_genes":["SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86949],"is_not":false,"summary":null,"term":"MONDO:0007067"}]},"cv_name":"mondo","definition":"Autosomal dominant phenotype characterized by increase of red blood cell ATP.","definition_xrefs":["EFO:0005840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolism disorder","termid":"MONDO:0016789"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"pyruvate kinase hyperactivity","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:102900","MESH:C566310","MEDGEN:350114","UMLS:C1863224"],"synonyms":[{"name":"adenosine triphosphate, elevated, of erythrocytes","type":"related"},{"name":"pyruvate kinase hyperactivity","type":"exact"}],"termid":"MONDO:0007067","terms_by_termid":{"MONDO:0007067":null},"xrefs":{"Monarch":{"xref_id":"0007067"}}}


id: PBO:0002919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2 OG-Fe(II) oxygenase superfamily protein Ofd2","termid":"PBO:0002919"}


id: PBO:0056235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI2 antisense RNA 2","termid":"PBO:0056235"}


id: PBO:0053715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 924","termid":"PBO:0053715"}


id: PBO:0061698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein 2, transcriptional regulator","termid":"PBO:0061698"}


id: FYPO:0004749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger portion of the subtelomeric region of the chromosome than normal.","definition_xrefs":["PMID:25774602","GO:0031509","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased spatial extent of subtelomeric heterochromatin assembly","synonyms":[{"name":"increased spatial extent of heterochromatin assembly at subtelomere","type":"exact"},{"name":"increased spatial extent of subtelomeric heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of subtelomeric heterochromatin assembly during vegetative growth","type":"exact"},{"name":"increased spatial extent of subtelomeric heterochromatin formation","type":"exact"},{"name":"increased spatial extent of telomeric heterochromatin assembly","type":"related"},{"name":"subtelomeric heterochromatin spreading","type":"related"}],"termid":"FYPO:0004749"}


id: PBO:0084870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S7 ribosomal protein","termid":"PBO:0084870"}


id: GO:0071485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an absence of light stimuli.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to absence of light","termid":"GO:0009646"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to absence of light","synonyms":[{"name":"cellular response to darkness","type":"related"}],"termid":"GO:0071485"}


id: FYPO:0001808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of adenine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal adenine import","termid":"FYPO:0001807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased adenine import","synonyms":[{"name":"decreased adenine import across plasma membrane","type":"exact"},{"name":"decreased adenine import during mitotic cell cycle","type":"related"},{"name":"decreased adenine import during vegetative growth","type":"exact"},{"name":"decreased adenine import into cell","type":"exact"},{"name":"decreased adenine uptake","type":"exact"},{"name":"reduced adenine import","type":"exact"}],"termid":"FYPO:0001808"}


id: GO:0060097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly, arrangement, or disassembly of cytoskeletal structures that is involved in the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"part_of","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810","GO:0016192","GO:0007010"],"is_obsolete":false,"name":"cytoskeletal rearrangement involved in phagocytosis, engulfment","termid":"GO:0060097"}


id: GO:0030160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that provides a physical support bridging a synaptic signaling receptor and a downstream signaling molecule.","definition_xrefs":["PMID:10506216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor complex adaptor activity","termid":"GO:0030159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"synaptic receptor adaptor activity","synonyms":[{"name":"GKAP/Homer scaffold activity","type":"narrow"},{"name":"GKAP/Homer scaffold protein","type":"narrow"},{"name":"postsynaptic density scaffold protein","type":"narrow"}],"termid":"GO:0030160"}


id: PBO:0017709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omega-amidase (predicted)","termid":"PBO:0017709"}


id: PATO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration which is higher relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"concentrated","termid":"PATO:0001159"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased concentration","synonyms":[{"name":"high concentration","type":"exact"}],"termid":"PATO:0001162"}


id: GO:0086013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the cardiac muscle cell plasma membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during action potential","termid":"GO:0086011"},{"relation_name":"is_a","term_name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"},{"relation_name":"part_of","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}


id: GO:0032188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a contractile ring is assembled in a specific location as part of a process of cell cycle cytokinesis.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of actomyosin contractile ring localization (obsolete GO:0032188)","synonyms":[{"name":"actomyosin ring positioning","type":"related"},{"name":"contractile ring positioning","type":"broad"},{"name":"cytokinesis site selection by contractile ring positioning","type":"exact"},{"name":"establishment of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"establishment of contractile ring localization involved in cell cycle cytokinesis","type":"exact"},{"name":"establishment of contractile ring localization involved in cytokinesis during cell cycle","type":"related"}],"termid":"GO:0032188"}


id: FYPO:0001283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during a cellular response to nitrogen starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to nitrogen starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to nitrogen starvation","type":"related"},{"name":"decreased protein level during cellular response to nitrogen depletion","type":"exact"},{"name":"decreased protein level during cellular response to nitrogen deprivation","type":"exact"},{"name":"decreased protein level during nitrogen starvation","type":"exact"},{"name":"reduced protein level during cellular response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0001283"}


id: MONDO:0859272
data:
  {"annotated_genes":["SJAG_01638"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86628],"is_not":false,"summary":null,"term":"MONDO:0859272"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with speech delay and variable ocular anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823967","OMIM:619989","UMLS:C5774194"],"termid":"MONDO:0859272","terms_by_termid":{"MONDO:0859272":null},"xrefs":{"Monarch":{"xref_id":"0859272"}}}


id: GO:0051979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of O-acetyl ester groups to alginic acid, a linear polymer of D-mannuronate and L-guluronate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alginic acid metabolic process","termid":"GO:0042120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"alginic acid acetylation","synonyms":[{"name":"alginate acetylation","type":"exact"}],"termid":"GO:0051979"}


id: PBO:0068760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 5, pseudogene","termid":"PBO:0068760"}


id: MONDO:0021055
data:
  {"annotated_genes":["SJAG_03724","SJAG_02261","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012041"},{"annotations":[85007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014630"},{"annotations":[86896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"Familial adenomatous polyposis (FAP) is characterized by the development of hundreds to thousands of adenomas in the rectum and colon during the second decade of life.","definition_xrefs":["Orphanet:733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic or attenuated familial adenomatous polyposis","termid":"MONDO:0021057"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"is_obsolete":false,"name":"classic familial adenomatous polyposis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6408","MEDGEN:46010","NCIT:C3339","ICDO:8220/0","DECIPHER:49","DOID:0050424","NANDO:2200915","NORD:1121","SCTID:72900001","UMLS:C0032580","MedDRA:10056981","OMIMPS:175100"],"synonyms":[{"name":"APC - adenomatous polyposis coli","type":"exact"},{"name":"FAP","type":"exact"},{"name":"FPC","type":"related"},{"name":"Familial Adenomatous Polyposis","type":"exact"},{"name":"adenomatous polyposis coli","type":"exact"},{"name":"adenomatous polyposis of the colon","type":"exact"},{"name":"classic FAP","type":"exact"},{"name":"classic familial adenomatous polyposis","type":"exact"},{"name":"colorectal adenomatous polyposis","type":"exact"},{"name":"familial adenomatous polyposis","type":"exact"},{"name":"familial adenomatous polyposis coli","type":"exact"},{"name":"familial adenomatous polyposis of the colon","type":"related"},{"name":"familial adenomatous polyposis syndrome","type":"exact"},{"name":"familial multiple polyposis","type":"related"},{"name":"familial polyposis","type":"exact"},{"name":"familial polyposis coli","type":"exact"},{"name":"hereditary adenomatous polyposis coli","type":"exact"},{"name":"hereditary polyposis coli","type":"related"},{"name":"polyposis coli","type":"exact"}],"termid":"MONDO:0021055","terms_by_termid":{"MONDO:0012041":null,"MONDO:0014630":null,"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0021055"}}}


id: GO:0047832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5D-5-O-methyl-chiro-inositol + NADP+ = 2D-5-O-methyl-2,3,5/4,6-pentahydroxycyclohexanone + H+ + NADPH.","definition_xrefs":["RHEA:20437","EC:1.1.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-pinitol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03498","MetaCyc:D-PINITOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"1D-3-O-methyl-chiro-inositol:NADP+ oxidoreductase activity","type":"related"},{"name":"5D-5-O-methyl-chiro-inositol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047832"}


id: GO:2000462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of eukaryotic cell surface binding (obsolete GO:2000462)","synonyms":[{"name":"positive regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000462"}


id: PBO:0072308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 5","termid":"PBO:0072308"}


id: MONDO:0016584
data:
  {"annotated_genes":["SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012074"}]},"cv_name":"mondo","definition":"Mandibuloacral dysplasia (MAD) is a rare genetic bone disorder characterized by growth delay, postnatal development of craniofacial anomalies including mandibular hypoplasia, progressive acral osteolysis, mottled or patchy pigmentation, skin atrophy, and partial or generalized lipodystrophy.","definition_xrefs":["Orphanet:2457"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"},{"relation_name":"is_a","term_name":"hereditary lipodystrophy","termid":"MONDO:0020087"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"mandibuloacral dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:11893","UMLS:C0432291","icd11.foundation:1687046570","DOID:0081127","NORD:1398","OMIMPS:248370","MEDGEN:98485"],"synonyms":[{"name":"MAD","type":"exact"},{"name":"mandibuloacral dysplasia with lipodystrophy","type":"exact"}],"termid":"MONDO:0016584","terms_by_termid":{"MONDO:0012074":null},"xrefs":{"Monarch":{"xref_id":"0016584"}}}


id: GO:0098986
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A T-shaped presynpatic density. These are common in arhropod central nervous systems.","definition_xrefs":["GOC:dos","PMID:26780543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic density","termid":"GO:0098980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"T-bar","termid":"GO:0098986"}


id: PBO:0041210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1 pseudogene 2","termid":"PBO:0041210"}


id: SO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type I (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, -90 degrees < psi +120 degrees < +40 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_one","secondary_identifiers":["BS:00206"],"synonyms":[{"name":"asx turn left handed type one","type":"exact"},{"name":"asx_turn_il","type":"related"}],"termid":"SO:0001129"}


id: PBO:0062423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 84 pseudogene","termid":"PBO:0062423"}


id: MONDO:0029137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 74","secondary_identifiers":["DOID:0112165","MEDGEN:1648467","OMIM:618140","GARD:18151","UMLS:C4748334"],"synonyms":[{"name":"DFNA74","type":"narrow"},{"name":"deafness, autosomal dominant 74","type":"narrow"}],"termid":"MONDO:0029137","xrefs":{"Monarch":{"xref_id":"0029137"}}}


id: PBO:0055048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2463","termid":"PBO:0055048"}


id: MONDO:0014097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital short bowel syndrome is a rare intestinal disorder of neonates of unknown etiology. Patients are born with a short small bowel (less than 75 cm in length) that compromises proper intestinal absorption and leads chronic diarrhea, vomiting and failure to thrive.","definition_xrefs":["Orphanet:2301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital short bowel syndrome","secondary_identifiers":["UMLS:C5441717","GARD:16592","icd11.foundation:1672462112","SCTID:715201005","MEDGEN:1784105"],"synonyms":[{"name":"CSBS","type":"exact"},{"name":"congenital short bowel syndrome","type":"exact"}],"termid":"MONDO:0014097","xrefs":{"Monarch":{"xref_id":"0014097"}}}


id: MONDO:0018608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pure autonomic failure (PAF) is a neurodegenerative disease that affects the sympathetic branch of the autonomous nervous system and that manifests with orthostatic hypotension.","definition_xrefs":["Orphanet:441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"},{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"pure autonomic failure","secondary_identifiers":["GARD:10428","icd11.foundation:734022291","SCTID:84438001","UMLS:C0393911","MESH:D054970","NORD:1948","MEDGEN:98293"],"synonyms":[{"name":"Bradbury Eggleston syndrome","type":"exact"},{"name":"Bradbury-Eggleston syndrome","type":"exact"},{"name":"PAF","type":"exact"},{"name":"Pure dysautonomia","type":"exact"},{"name":"Pure idiopatic dysautonomia","type":"exact"},{"name":"idiopathic orthostatic hypotension","type":"exact"},{"name":"idiopathic orthostatic hypotension (a symptom)","type":"related"},{"name":"orthostatic hypotension (a symptom)","type":"related"}],"termid":"MONDO:0018608","xrefs":{"Monarch":{"xref_id":"0018608"}}}


id: GO:0003367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one ameboid cell to another that contributes to the establishment of cell polarity that is part of the directed movement of one of the cells.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion involved in ameboidal cell migration","termid":"GO:0003367"}


id: FYPO:0005448
data:
  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biological process","references_by_uniquename":{"PMID:21802294":null,"PMID:22300943":null,"PMID:25866389":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_00610","SJAG_01794","SJAG_01330","SJAG_02923","SJAG_02252","SJAG_02592","SJAG_02486","SJAG_04009","SJAG_00514","SJAG_02819","SJAG_01745","SJAG_04551","SJAG_01718","SJAG_03143","SJAG_00993","SJAG_03453","SJAG_01143","SJAG_02379"],"single_locus_genotype_uniquenames":["mid1delta","efc25delta","mad2delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ste6delta","byr2delta","spk1delta","ace2delta","sty1delta","sep1delta","ras1delta","atf1delta","byr1delta","lem2delta","scd2delta","ste11delta","pck2delta","scd1delta","gap1delta"],"synonyms":[{"name":"biological process abolished","type":"exact"}],"termid":"FYPO:0005448","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYECO:0000272":null,"FYPO:0000280":null,"FYPO:0001132":null,"FYPO:0001375":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002998":null,"FYPO:0004105":null,"FYPO:0004318":null,"FYPO:0004481":null,"FYPO:0006557":null,"FYPO:0007177":null,"FYPO:0007789":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0050886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that involves the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocrine process","synonyms":[{"name":"endocrine physiological process","type":"exact"},{"name":"endocrine physiology","type":"exact"}],"termid":"GO:0050886"}


id: PBO:0052477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 3","termid":"PBO:0052477"}


id: PBO:0088008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I HSP40 co-chaperone; involved in regulation of HSP90 and HSP70 functions; acts as an adaptor that helps Rsp5p recognize cytosolic misfolded proteins for ubiquitination after heat shock; critical for determining cell size at Start as a function of growth rate; involved in protein translocation across membranes; member of the DnaJ family; chimeric protein in which human p58IPK J domain replaces yeast Ydj1p J domain can complement yeast ydj1 mutant","termid":"PBO:0088008"}


id: GO:0102762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eriodictyol + S-adenosyl-L-methionine = H+ + hesperetin(1-) + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","MetaCyc:RXN-7754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"eriodictyol 4'-O-methyltransferase activity","termid":"GO:0102762"}


id: GO:0004298
data:
  {"annotated_genes":["SJAG_01014","SJAG_05351","SJAG_04969","SJAG_03151"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56996,61267,61587,74070],"is_not":false,"summary":null,"term":"GO:0004298"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"threonine-type peptidase activity","termid":"GO:0070003"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01014":null,"SJAG_03151":null,"SJAG_04969":null,"SJAG_05351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016787","GO:0008233","GO:0003824"],"is_obsolete":false,"name":"threonine-type endopeptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null},"secondary_identifiers":["EC:3.4.25.-","Reactome:R-HSA-9818574","Reactome:R-HSA-9818577"],"synonyms":[{"name":"26S protease","type":"related"},{"name":"MCP","type":"related"},{"name":"alkaline protease","type":"related"},{"name":"ingensin","type":"related"},{"name":"large multicatalytic protease","type":"narrow"},{"name":"lens neutral proteinase","type":"narrow"},{"name":"multicatalytic endopeptidase complex","type":"related"},{"name":"multicatalytic proteinase","type":"narrow"},{"name":"multicatalytic proteinase (complex)","type":"narrow"},{"name":"prosome","type":"related"},{"name":"proteasome endopeptidase complex","type":"narrow"},{"name":"threonine endopeptidase activity","type":"exact"},{"name":"tricorn protease","type":"narrow"},{"name":"tricorn proteinase","type":"narrow"}],"termid":"GO:0004298","terms_by_termid":{"GO:0004298":null}}


id: MONDO:0002440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that is caused by excess erythropoietin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired secondary polycythemia","termid":"MONDO:0016541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"erythropoietin polycythemia","secondary_identifiers":["SCTID:367328005","UMLS:C0391869","MEDGEN:98214","DOID:2839","NCIT:C35434"],"synonyms":[{"name":"nephrogenous polycythemia","type":"exact"},{"name":"polycythaemia due to Excess erythropoetin production","type":"exact"},{"name":"polycythemia due to excess erythopoetin production","type":"exact"},{"name":"polycythemia, nephrogenous","type":"exact"},{"name":"secondary polycythemia with excess erythropoietin","type":"exact"}],"termid":"MONDO:0002440","xrefs":{"Monarch":{"xref_id":"0002440"}}}


id: MONDO:0016106
data:
  {"annotated_genes":["SJAG_03703","SJAG_03188","SJAG_01939","SJAG_04601","SJAG_03470","SJAG_02043","SJAG_04228","SJAG_01491","SJAG_02431","SJAG_02396","SJAG_03715","SJAG_04003","SJAG_04053","SJAG_03145","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021018"},{"annotations":[85562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012034"},{"annotations":[84970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[86437,86438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[85719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[85654,85655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[85924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008030"},{"annotations":[86537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"},{"annotations":[86338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957270"},{"annotations":[86016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011266"},{"annotations":[85394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958176"},{"annotations":[85570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014800"},{"annotations":[85214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010684"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_01939":null,"SJAG_02043":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_03145":null,"SJAG_03188":null,"SJAG_03470":null,"SJAG_03703":null,"SJAG_03715":null,"SJAG_04003":null,"SJAG_04053":null,"SJAG_04228":null,"SJAG_04316":null,"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"progressive muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1633060","UMLS:C4551827","GARD:20360","Orphanet:206644"],"synonyms":[{"name":"progressive muscular dystrophy","type":"exact"}],"termid":"MONDO:0016106","terms_by_termid":{"MONDO:0008030":null,"MONDO:0008409":null,"MONDO:0010684":null,"MONDO:0010912":null,"MONDO:0011266":null,"MONDO:0012034":null,"MONDO:0012248":null,"MONDO:0013162":null,"MONDO:0014142":null,"MONDO:0014800":null,"MONDO:0021018":null,"MONDO:0957270":null,"MONDO:0958176":null},"xrefs":{"Monarch":{"xref_id":"0016106"}}}


id: PR:Q09894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.07c gene.","definition_xrefs":["UniProtKB:Q09894","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.07c","synonyms":[{"name":"Spom972h-SPAC24B11.07c","type":"exact"}],"termid":"PR:Q09894"}


id: PBO:0062449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 116 pseudogene","termid":"PBO:0062449"}


id: PBO:0046161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF2 pseudogene 1","termid":"PBO:0046161"}


id: PBO:0068601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 52, pseudogene","termid":"PBO:0068601"}


id: PBO:0068026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 331","termid":"PBO:0068026"}


id: GO:0043183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor 1.","definition_xrefs":["GOC:st"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor binding","termid":"GO:0005172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor 1 binding","synonyms":[{"name":"Flt-1 binding","type":"exact"},{"name":"VEGF receptor 1 binding","type":"exact"},{"name":"VEGFR 1 binding","type":"exact"}],"termid":"GO:0043183"}


id: GO:0075192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont cell is formed, separated from the tip of an infection hypha by a septum. The haustorium mother cell usually contains 2-4 fungal nuclei, and its function is to attach and penetrate the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haustorium mother cell formation","synonyms":[{"name":"haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075192"}


id: PBO:0000626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium permease (predicted)","termid":"PBO:0000626"}


id: GO:0015115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of silicates from one side of a membrane to the other. Silicates are the salts of silicic acids, and are usually composed of silicon and oxygen (Si[x]O[y]), one or more metals, and possibly hydrogen. Types of silicate include unisilicates, metasilicates and hydrous silicates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"silicate transmembrane transporter activity","termid":"GO:0015115"}


id: GO:0043598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic complex of two polypeptides that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase. Examples of this component are found in prokaryotic species.","definition_xrefs":["PMID:16172520","PMID:14646196","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication factor C complex","termid":"GO:0005663"},{"relation_name":"part_of","term_name":"cytoplasmic replisome","termid":"GO:0043600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic DNA replication factor C complex","synonyms":[{"name":"cytoplasmic RFC","type":"exact"},{"name":"cytoplasmic clamp loader","type":"exact"}],"termid":"GO:0043598"}


id: PBO:0090063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf11","termid":"PBO:0090063"}


id: PBO:0045551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUSP5 divergent transcript","termid":"PBO:0045551"}


id: GO:0008201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to heparin, a member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heparin binding","synonyms":[{"name":"heparan sulfate binding","type":"related"}],"termid":"GO:0008201"}


id: MONDO:0019543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired aneurysmal subarachnoid hemorrhage is a serious, life threatening rare neurologic disease characterized by a sudden rupture of an intracranial aneurysm into the subarachnoid space. It usually presents with a sudden, severe, excruciating headache accompanied by nausea, vomiting and syncope. Other features may include focal neurological signs, third and sixth nerve palsies, seizures and cardiac failure. Early complications include rebleeding, hydrocephalus, and seizures.","definition_xrefs":["Orphanet:90065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subarachnoid hemorrhage","termid":"MONDO:0005099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired aneurysmal subarachnoid hemorrhage","secondary_identifiers":["GARD:19114","icd11.foundation:958976948","MEDGEN:572642","UMLS:C0338572"],"termid":"MONDO:0019543","xrefs":{"Monarch":{"xref_id":"0019543"}}}


id: PBO:0089233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain nuclear inner membrane protein Heh1/Lem2","termid":"PBO:0089233"}


id: GO:0051187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a cofactor, a substance that is required for the activity of an enzyme or other protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor catabolic process (obsolete GO:0051187)","synonyms":[{"name":"cofactor breakdown","type":"exact"},{"name":"cofactor catabolism","type":"exact"},{"name":"cofactor degradation","type":"exact"}],"termid":"GO:0051187"}


id: PBO:0034466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_mitochondrial_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0034466"}


id: GO:0060190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of protein desumoylation. Protein desumoylation is the process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein desumoylation","termid":"GO:0060188"},{"relation_name":"is_a","term_name":"negative regulation of protein modification by small protein conjugation or removal","termid":"GO:1903321"},{"relation_name":"negatively_regulates","term_name":"protein desumoylation","termid":"GO:0016926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein desumoylation","termid":"GO:0060190"}


id: GO:0048467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gynoecium over time, from its formation to the mature structure. The gynoecium is the collective name for the carpels of a flower.","definition_xrefs":["GOC:go_curators","PO:0008062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gynoecium development","synonyms":[{"name":"pistil development","type":"exact"}],"termid":"GO:0048467"}


id: MONDO:0016321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary interstitial glycogenosis (PIG) is a rare non-lethal pediatric form of interstitial lung disease (ILD).","definition_xrefs":["Orphanet:217557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary interstitial glycogenosis","secondary_identifiers":["SCTID:707551007","GARD:20516","ICD10CM:J84.842","MEDGEN:838075","UMLS:C3161106","icd11.foundation:1386580655"],"synonyms":[{"name":"PIG","type":"exact"},{"name":"infantile cellular interstitial pneumonitis","type":"exact"},{"name":"pig","type":"exact"}],"termid":"MONDO:0016321","xrefs":{"Monarch":{"xref_id":"0016321"}}}


id: PBO:0057965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3686","termid":"PBO:0057965"}


id: GO:0052463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of production of phytoalexins as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont phytoalexin production (obsolete GO:0052463)","synonyms":[{"name":"modulation by organism of symbiont phytoalexin production","type":"exact"}],"termid":"GO:0052463"}


id: GO:0008155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete larval behavior (sensu Drosophila) (obsolete GO:0008155)","synonyms":[{"name":"larval behavior (sensu Drosophila)","type":"exact"}],"termid":"GO:0008155"}


id: PBO:0027099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tDNA_antisense_small_RNA_level","termid":"PBO:0027099"}


id: PBO:0039429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anomalous homeobox","termid":"PBO:0039429"}


id: GO:2000244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of FtsZ-dependent cytokinesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinesis","termid":"GO:0032465"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"FtsZ-dependent cytokinesis","termid":"GO:0043093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of FtsZ-dependent cytokinesis","synonyms":[{"name":"regulation of prokaryote-type cytokinesis","type":"related"},{"name":"regulation of prokaryotic fission","type":"related"}],"termid":"GO:2000244"}


id: MONDO:1012641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in pigs and is characterized by low plasma vWF concentrations and mild to moderate bleeding symptoms.","definition_xrefs":["OMIA:001057-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, pig","termid":"MONDO:1011615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease I, pig","termid":"MONDO:1012641","xrefs":{"Monarch":{"xref_id":"1012641"}}}


id: FYPO:0006578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type). The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000631","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint","synonyms":[{"name":"normal G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006578"}


id: PBO:0069486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 753, pseudogene","termid":"PBO:0069486"}


id: PBO:0001775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Cic1/Utp30 family (predicted)","termid":"PBO:0001775"}


id: PR:O43065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TATA-binding protein-associated factor 172 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03351","PRO:DNx","PANTHER:PTHR10799:SF225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase mot1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1826.01c","secondary_identifiers":["UniProtKB:O43065"],"synonyms":[{"name":"Spom972h-BTAF1","type":"exact"},{"name":"TBP-associated factor mot1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"modifier of transcription 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43065"}


id: PBO:0066200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 1","termid":"PBO:0066200"}


id: FYPO:0003579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during one or both meiotic nuclear divisions is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during meiotic cell cycle","termid":"FYPO:0006976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during meiosis","synonyms":[{"name":"normal RNA accumulation during meiosis","type":"related"},{"name":"normal RNA level during meiotic nuclear division","type":"exact"},{"name":"normal cellular RNA level during meiosis","type":"exact"},{"name":"normal mRNA level during meiosis","type":"narrow"},{"name":"normal transcript level during meiosis","type":"exact"}],"termid":"FYPO:0003579"}


id: GO:0042018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-22 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-22 receptor activity","synonyms":[{"name":"IL-22 receptor activity","type":"exact"},{"name":"IL-22R","type":"exact"}],"termid":"GO:0042018"}


id: FYPO:0001973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear division, cytokinesis and subsequent cell separation are abnormal, resulting in the formation of a cell in which an undivided mass of DNA is located on one side of the septum. The septum does not degrade.","definition_xrefs":["PomBase:vw","PMID:3283148","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell separation after cytokinesis, with abnormal nuclear division (obsolete FYPO:0001973)","synonyms":[{"name":"abnormal cell separation after cytokinesis, with abnormal nuclear division during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis, with abnormal nuclear division during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation, with abnormal nuclear division","type":"exact"}],"termid":"FYPO:0001973"}


id: PBO:0072326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 12","termid":"PBO:0072326"}


id: GO:0101027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons of the optical nerve following their loss or damage.","definition_xrefs":["PMID:16699509","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optical nerve axon regeneration","termid":"GO:0101027"}


id: MONDO:0001463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the splenic flexure of colon.","direct_ancestors":[{"relation_name":"is_a","term_name":"descending colon cancer","termid":"MONDO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"splenic flexure cancer","secondary_identifiers":["MEDGEN:509294","UMLS:C0153440","SCTID:363413005","ICD9:153.7","DOID:12191"],"synonyms":[{"name":"Ca splenic flexure - colon","type":"exact"},{"name":"cancer of splenic flexure of colon","type":"exact"},{"name":"malignant neoplasm of splenic flexure","type":"exact"},{"name":"malignant neoplasm of splenic flexure of colon","type":"exact"},{"name":"malignant splenic flexure of colon neoplasm","type":"exact"},{"name":"malignant tumor of splenic flexure","type":"exact"},{"name":"malignant tumour of splenic flexure","type":"exact"},{"name":"splenic flexure of colon cancer","type":"exact"}],"termid":"MONDO:0001463","xrefs":{"Monarch":{"xref_id":"0001463"}}}


id: PBO:0088878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein Cbp3","termid":"PBO:0088878"}


id: MONDO:0017044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome, associating familial adult medullary cystic disease with spastic quadriparesis has been described in two cases so far. Renal transplantation was successful in those two patients.","definition_xrefs":["Orphanet:2666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cystic renal disease","termid":"MONDO:0019741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"adult familial nephronophthisis-spastic quadriparesia syndrome","secondary_identifiers":["UMLS:C4518090","GARD:18777","MEDGEN:1385988"],"termid":"MONDO:0017044","xrefs":{"Monarch":{"xref_id":"0017044"}}}


id: PBO:0042076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 144C, pseudogene","termid":"PBO:0042076"}


id: PATO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An EM radiation quality in which the EM radiation is within the fiat range of the spectrum visible deemed to be light.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optical quality","termid":"PATO:0001300"}


id: PBO:0018104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name description Alpha Amylase Homolog","termid":"PBO:0018104"}


id: MONDO:0030493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 60","secondary_identifiers":["UMLS:C5562035","DOID:0112355","OMIM:619646","MEDGEN:1794245"],"synonyms":[{"name":"SPGF60","type":"exact"}],"termid":"MONDO:0030493","xrefs":{"Monarch":{"xref_id":"0030493"}}}


id: PBO:0040110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASAP1 intronic transcript 1","termid":"PBO:0040110"}


id: GO:0047590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-dehydro-2-deoxy-D-gluconate = ADP + 6-phospho-5-dehydro-2-deoxy-D-gluconate.","definition_xrefs":["EC:2.7.1.92","MetaCyc:5-DEHYDRO-2-DEOXYGLUCONOKINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"5-dehydro-2-deoxygluconokinase activity","secondary_identifiers":["RHEA:13497"],"synonyms":[{"name":"5-keto-2-deoxyglucono kinase (phosphorylating)","type":"related"},{"name":"5-keto-2-deoxygluconokinase activity","type":"related"},{"name":"ATP:5-dehydro-2-deoxy-D-gluconate 6-phosphotransferase activity","type":"related"},{"name":"DKH kinase activity","type":"related"}],"termid":"GO:0047590"}


id: GO:0042385
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class III myosin heavy chain and associated light chains; myosin III is monomeric myosin that serves as a link between the cytoskeleton and the signaling complex involved in phototransduction, and differs from all other myosins in having an N-terminal kinase domain.","definition_xrefs":["GOC:jl","PMID:33718386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0015629","GO:0032991"],"is_obsolete":false,"name":"myosin III complex","termid":"GO:0042385"}


id: GO:2000538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of B cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"},{"relation_name":"is_a","term_name":"regulation of B cell chemotaxis","termid":"GO:2000537"},{"relation_name":"positively_regulates","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell chemotaxis","termid":"GO:2000538"}


id: GO:0060063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region of the embryonic shield of the embryo that acts as the main signaling center establishing the teleost body plan.","definition_xrefs":["GOC:dph","PMID:9442883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the embryonic shield","synonyms":[{"name":"Spemann's organizer formation at the embryonic shield","type":"exact"},{"name":"Spemann-Mangold organizer formation at the embryonic shield","type":"exact"}],"termid":"GO:0060063"}


id: GO:0032968
data:
  {"annotated_genes":["SJAG_03118","SJAG_01151","SJAG_03061","SJAG_00150","SJAG_01149","SJAG_03967"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70750,71368,77855,79313,105805,116737],"is_not":false,"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription, elongation","termid":"GO:0032786"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase II","termid":"GO:0034243"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"positively_regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0090040"],"synonyms":[{"name":"positive regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0032968","terms_by_termid":{"GO:0032968":null}}


id: MONDO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nevus of Ito is a benign dermal melanocytosis occurring most frequently in the Asian populations and characterized by unilateral, asymptomatic, blue, gray or brown skin pigmentation within the acromioclavicular and upper chest area (involving the side of the neck, the supraclavicular and scapular areas, and the shoulder region). It is usually diagnosed in early infancy and in early adolescence. Nevus of Ito may progressively enlarge and darken in color (particularly with puberty) and its appearance usually remains stable once adulthood is reached. Spontaneous regression does not occur. Malignant melanoma has rarely been reported within a nevus of Ito. It shares the clinical features of nevus of Ota, except its anatomic location and may in rare occasions occur together with the latter.","definition_xrefs":["Orphanet:263432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"nevus of Ito","secondary_identifiers":["EFO:1000395","NCIT:C7582","GARD:10830"],"synonyms":[{"name":"Ito's Nevus","type":"exact"},{"name":"hypomelanosis of Ito","type":"related"},{"name":"nevi of Ito","type":"exact"},{"name":"nevus fuscocaeruleus acromiodeltoideus","type":"exact"}],"termid":"MONDO:0016985","xrefs":{"Monarch":{"xref_id":"0016985"}}}


id: PBO:0071219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 60","termid":"PBO:0071219"}


id: PBO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rik1/ddb1 subfamily","termid":"PBO:0001290"}


id: PBO:0017096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Nnk1 (predicted)","termid":"PBO:0017096"}


id: PR:O74332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1685.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.12c","synonyms":[{"name":"Spom972h-SPBC1685.12c","type":"exact"}],"termid":"PR:O74332"}


id: PBO:0048880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member F, pseudogene","termid":"PBO:0048880"}


id: MONDO:0030077
data:
  {"annotated_genes":["SJAG_02618"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85290],"is_not":false,"summary":null,"term":"MONDO:0030077"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vertebral-cardiac-renal anomalies syndrome","termid":"MONDO:0020831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02618":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005267"],"is_obsolete":false,"name":"vertebral, cardiac, renal, and limb defects syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618845","UMLS:C5394250","GARD:18510","MEDGEN:1709064"],"synonyms":[{"name":"Congenital Nad Deficiency Disorder 3","type":"exact"},{"name":"VCRL3","type":"exact"},{"name":"VERTEBRAL, CARDIAC, RENAL, AND LIMB DEFECTS SYNDROME 3","type":"exact"},{"name":"vertebral, cardiac, renal, and limb defects syndrome 3","type":"exact"}],"termid":"MONDO:0030077","terms_by_termid":{"MONDO:0030077":null},"xrefs":{"Monarch":{"xref_id":"0030077"}}}


id: MONDO:0957788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 18a, autosomal dominant","secondary_identifiers":["OMIM:620512","MEDGEN:1844217","UMLS:C5882694"],"termid":"MONDO:0957788","xrefs":{"Monarch":{"xref_id":"0957788"}}}


id: PBO:0062433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 96 pseudogene","termid":"PBO:0062433"}


id: GO:0015012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heparan sulfate proteoglycans, which have glycosaminoglycan repeat units consisting of alternating alpha-(1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues.","definition_xrefs":["ISBN:0198506732","GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"},{"relation_name":"is_a","term_name":"heparan sulfate proteoglycan metabolic process","termid":"GO:0030201"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"heparan sulfate proteoglycan biosynthetic process","secondary_identifiers":["Reactome:R-HSA-2022928","MetaCyc:PWY-6558"],"synonyms":[{"name":"heparan sulfate proteoglycan anabolism","type":"exact"},{"name":"heparan sulfate proteoglycan biosynthesis","type":"exact"},{"name":"heparan sulfate proteoglycan formation","type":"exact"},{"name":"heparan sulfate proteoglycan synthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthetic process","type":"exact"},{"name":"heparin proteoglycan biosynthetic process","type":"related"}],"termid":"GO:0015012"}


id: PBO:0050222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2","termid":"PBO:0050222"}


id: PBO:0045537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase 1","termid":"PBO:0045537"}


id: MONDO:0013438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the SEPSECS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 2","termid":"MONDO:0016759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 2D","secondary_identifiers":["MEDGEN:462490","OMIM:613811","GARD:15717","DOID:0060270","UMLS:C3151140"],"synonyms":[{"name":"Cerebellocerebral atrophy, progressive","type":"related"},{"name":"PCH2D","type":"related"},{"name":"SEPSECS non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"cerebello-cerebral atrophy, progressive","type":"related"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in SEPSECS","type":"exact"},{"name":"pontocerebellar hypoplasia type 2D","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2D","type":"related"}],"termid":"MONDO:0013438","xrefs":{"Monarch":{"xref_id":"0013438"}}}


id: FYPO:0001542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of nickel ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular nickel level","synonyms":[{"name":"normal cellular nickel accumulation","type":"related"},{"name":"normal cellular nickel ion level","type":"exact"},{"name":"normal cellular nickel level during mitotic cell cycle","type":"related"},{"name":"normal cellular nickel level during vegetative growth","type":"exact"}],"termid":"FYPO:0001542"}


id: GO:0061559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of a cranial ganglion is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion morphogenesis","termid":"GO:0061552"},{"relation_name":"part_of","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion morphogenesis","synonyms":[{"name":"cranial ganglia morphogenesis","type":"related"}],"termid":"GO:0061559"}


id: GO:0045903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the ability of the translational apparatus to interpret the genetic code.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational fidelity","termid":"GO:0006450"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translational fidelity","synonyms":[{"name":"activation of translational fidelity","type":"narrow"},{"name":"stimulation of translational fidelity","type":"narrow"},{"name":"up regulation of translational fidelity","type":"exact"},{"name":"up-regulation of translational fidelity","type":"exact"},{"name":"upregulation of translational fidelity","type":"exact"}],"termid":"GO:0045903"}


id: PR:O59858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutathione peroxidase 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.03c","secondary_identifiers":["UniProtKB:O59858"],"synonyms":[{"name":"Spom972h-GPX8","type":"exact"}],"termid":"PR:O59858"}


id: PATO:0002383
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A waxiness which is relatively low.","direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"},{"relation_name":"is_a","term_name":"waxiness","termid":"PATO:0002381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased waxiness","termid":"PATO:0002383"}


id: PBO:0078914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 3-3","termid":"PBO:0078914"}


id: PBO:0049555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 17","termid":"PBO:0049555"}


id: FYPO:0006377
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to endoplasmic reticulum","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"abnormal protein localisation to endoplasmic reticulum","type":"exact"},{"name":"abnormal protein localization to ER","type":"exact"}],"termid":"FYPO:0006377","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: GO:0102622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: linuron + H2O = N,O-dimethylhydroxylamine + carbon dioxide + 3,4-dichloroaniline.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete linuron hydrolase activity (obsolete GO:0102622)","termid":"GO:0102622"}


id: GO:0030721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spectrosome, a germline specific spherical organelle that is the precursor to the fusome.","definition_xrefs":["PMID:11131529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spectrosome organization","synonyms":[{"name":"spectrosome organisation","type":"exact"},{"name":"spectrosome organization and biogenesis","type":"related"}],"termid":"GO:0030721"}


id: MONDO:0020725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anemia due to a disorder that is persistent or long-standing in nature.","definition_xrefs":["NCIT:C35659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"anemia due to chronic disorder","secondary_identifiers":["MEDGEN:507442","UMLS:C0002873","ICD9:285.29","SCTID:234347009"],"synonyms":[{"name":"Secondary anaemia","type":"related"},{"name":"Secondary anemia","type":"related"},{"name":"anaemia due to Chronic Disorder","type":"related"},{"name":"anaemia of chronic disease","type":"exact"},{"name":"anaemia of chronic disorder","type":"related"},{"name":"anaemia of chronic illness","type":"exact"},{"name":"anaemia of chronic inflammation","type":"exact"},{"name":"anaemia of systemic disease","type":"related"},{"name":"anemia due to Chronic Disorder","type":"related"},{"name":"anemia due to chronic disorder","type":"exact"},{"name":"anemia of chronic disease","type":"exact"},{"name":"anemia of chronic disorder","type":"related"},{"name":"anemia of chronic illness","type":"exact"},{"name":"anemia of chronic inflammation","type":"exact"},{"name":"anemia of systemic disease","type":"related"}],"termid":"MONDO:0020725","xrefs":{"Monarch":{"xref_id":"0020725"}}}


id: MONDO:0003559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical adenosquamous carcinoma (obsolete MONDO:0003559)","termid":"MONDO:0003559","xrefs":{"Monarch":{"xref_id":"0003559"}}}


id: MONDO:0008049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal myopathy","termid":"MONDO:0018949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, distal, infantile-onset","secondary_identifiers":["UMLS:C4011725","DOID:0070196","MEDGEN:860162","OMIM:160300"],"synonyms":[{"name":"myopathy, distal, infantile-onset","type":"exact"}],"termid":"MONDO:0008049","xrefs":{"Monarch":{"xref_id":"0008049"}}}


id: PBO:0075251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 3","termid":"PBO:0075251"}


id: GO:1902743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lamellipodium organization.","definition_xrefs":["GOC:als","PMID:16054028","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"lamellipodium organization","termid":"GO:0097581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lamellipodium organization","termid":"GO:1902743"}


id: PBO:0004104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box variant","termid":"PBO:0004104"}


id: PBO:0054719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2128","termid":"PBO:0054719"}


id: RO:0002551
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a segment or subdivision of an organism and the maximal subdivision of material entities that provides structural support for that segment or subdivision.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_skeleton","termid":"RO:0002551"}


id: MONDO:0020248
data:
  {"annotated_genes":["SJAG_02286","SJAG_02878","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[86224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[86920,86919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous syneresis","termid":"MONDO:0001377"},{"relation_name":"is_a","term_name":"inherited vitreoretinopathy","termid":"MONDO:0020246"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02286":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"vitreoretinal degeneration","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:87480","GARD:5506","ICD10CM:H35.5","HP:0007964","Orphanet:98670","SCTID:247182006","UMLS:C0344290"],"synonyms":[{"name":"degenerative vitreoretinopathy","type":"exact"}],"termid":"MONDO:0020248","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null,"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0020248"}}}


id: GO:0016150
data:
  {"annotated_genes":["SJAG_05221"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98410],"is_not":false,"summary":null,"term":"GO:0016150"}]},"cv_name":"molecular_function","definition":"A translation release factor that is not specific to particular codons; binds to guanine nucleotides.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation release factor activity","termid":"GO:0003747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"translation release factor activity, codon nonspecific","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016150","terms_by_termid":{"GO:0016150":null}}


id: GO:0033901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(A), forming oligoribonucleotides and ultimately 3'-AMP.","definition_xrefs":["EC:3.1.27.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.27.8-RXN"],"synonyms":[{"name":"endoribonuclease V activity","type":"related"}],"termid":"GO:0033901"}


id: GO:0060062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region at the dorsal lip of the blatopore of the embryo that acts as the main signaling center establishing the vertebrate body plan.","definition_xrefs":["GOC:dph","PMID:9442883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the dorsal lip of the blastopore","synonyms":[{"name":"Spemann's organizer formation at the dorsal lip of the blastopore","type":"exact"},{"name":"Spemann-Mangold organizer formation at the dorsal lip of the blastopore","type":"exact"}],"termid":"GO:0060062"}


id: PBO:0040575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B4GAT1 divergent transcript","termid":"PBO:0040575"}


id: GO:0006829
data:
  {"annotated_genes":["SJAG_00222","SJAG_04185","SJAG_03528","SJAG_00328","SJAG_01990","SJAG_01803","SJAG_01078","SJAG_02968"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[112958,103929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[93535,93534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[104068,74397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"},{"annotations":[78069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071577"}]},"cv_name":"biological_process","definition":"The directed movement of zinc (Zn II) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02968":null,"SJAG_03528":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"zinc ion transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"zinc II ion transport","type":"exact"},{"name":"zinc transport","type":"exact"}],"termid":"GO:0006829","terms_by_termid":{"GO:0071577":null,"GO:0071578":null,"GO:0140147":null,"GO:0140209":null,"GO:1904257":null}}


id: GO:1904389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a rod bipolar cell.","definition_xrefs":["GO_REF:0000086","GOC:TermGenie","PMID:16914133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal bipolar neuron differentiation","termid":"GO:0060040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rod bipolar cell differentiation","termid":"GO:1904389"}


id: PBO:0006666
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Spc7","termid":"PBO:0006666"}


id: RO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"preceded_by","termid":"BFO:0000062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_preceded_by","termid":"RO:0002087"}


id: GO:0098689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virus switches on its replication cycle in an infected cell. The process is typically controlled by a genetic switch controlled by environmental factors such as cell type, cell shape, the availability of nutrients, superinfection or exposure of infected cells to UV or various chemical stimuli.","definition_xrefs":["PMID:19416825","PMID:24339346","VZ:3964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"regulates","term_name":"release from viral latency","termid":"GO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"latency-replication decision","synonyms":[{"name":"Latency-replication switch","type":"exact"},{"name":"lytic switch","type":"exact"},{"name":"prophage induction","type":"narrow"},{"name":"proviral induction","type":"exact"},{"name":"proviral switch","type":"exact"},{"name":"reactivation of latent virus","type":"exact"}],"termid":"GO:0098689"}


id: GO:0071488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low light intensity stimulus. A very low light intensity stimulus is defined as a level of electromagnetic radiation below 0.001 mmol/m2/sec.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to very low light intensity stimulus","termid":"GO:0055122"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to very low light intensity stimulus","termid":"GO:0071488"}


id: PBO:0052576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 5B","termid":"PBO:0052576"}


id: MONDO:0021845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by a unilateral linear basal cell nevus, diffuse osteoma cutis, unilateral anodontia (missing teeth), and abnormal bone mineralization. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:2715453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"anodontia","termid":"MONDO:0008797"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aloi Tomasini Isaia syndrome","secondary_identifiers":["GARD:417","UMLS:C2931405","MESH:C537049","MEDGEN:419073"],"synonyms":[{"name":"basal cell nevus anodontia abnormal bone mineralization","type":"exact"},{"name":"basal cell nevus, anodontia, abnormal bone mineralization","type":"related"},{"name":"unilateral linear basal cell nevus associated with diffuse osteoma cutis, unilateral anodontia, and abnormal bone mineralization","type":"related"}],"termid":"MONDO:0021845","xrefs":{"Monarch":{"xref_id":"0021845"}}}


id: GO:0098615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + dimethyl selenide => S-adenosyl-L-homocysteine + trimethylselenonium.","definition_xrefs":["PMID:3350800","PMID:17988700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"dimethyl selenide methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408554"],"termid":"GO:0098615"}


id: PBO:0082077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'- and 3'-flap DNA binding protein; required for recruitment of Rad1p-Rad10p to single-strand annealing intermediates with 3' non-homologous tails for removal during double-strand break repair; forms a complex with Rad1p-Rad10p and stimulates its endonuclease activity; green fluorescent protein (GFP)-fusion protein localizes to the nucleus","termid":"PBO:0082077"}


id: PBO:0063282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 8","termid":"PBO:0063282"}


id: PBO:0080063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32","termid":"PBO:0080063"}


id: GO:1902796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snoRNA processing.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of snoRNA metabolic process","termid":"GO:1903323"},{"relation_name":"regulates","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016074"],"is_obsolete":false,"name":"regulation of snoRNA processing","termid":"GO:1902796"}


id: MONDO:0012608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, neuromuscular disease characterized by proximal muscle weakness with an early involvement of foot and hand muscles following normal motor development in early childhood, a rapidly progressive disease course leading to generalized areflexic tetraplegia with contractures, severe scoliosis, hyperlordosis, and progressive respiratory insufficiency leading to assisted ventilation. Cranial nerve functions are normal and tongue wasting and fasciculations are absent. Milder phenotype with a moderate generalized weakness and slower disease progress was reported.","definition_xrefs":["Orphanet:206580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 4","secondary_identifiers":["MEDGEN:369682","MESH:C567023","OMIM:611067","GARD:17101","UMLS:C1970211","DOID:0111213"],"synonyms":[{"name":"DSMA4","type":"exact"},{"name":"autosomal recessive distal spinal muscular atrophy type 4","type":"exact"},{"name":"autosomal recessive lower motor neuron disease with childhood onset","type":"exact"},{"name":"dSMA4","type":"exact"},{"name":"distal spinal muscular atrophy type 4","type":"exact"},{"name":"neuronopathy, distal hereditary motor, autosomal recessive 4","type":"exact"},{"name":"spinal muscular atrophy, distal, autosomal recessive, 4","type":"related"},{"name":"spinal muscular atrophy, distal, autosomal recessive, type 4","type":"exact"}],"termid":"MONDO:0012608","xrefs":{"Monarch":{"xref_id":"0012608"}}}


id: MONDO:0004651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that is caused by infection with Variola, and that is characterized by small, raised bumps.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smallpox","secondary_identifiers":["UMLS:C0037354","icd11.foundation:2054716425","DOID:8736","ICD9:050","ICD10CM:B03","MESH:D012899","ICD9:050.9","SCTID:67924001","NCIT:C35027","MEDGEN:20785"],"synonyms":[{"name":"Variola","type":"related"},{"name":"Variola virus caused disease or disorder","type":"exact"},{"name":"Variola virus disease or disorder","type":"exact"},{"name":"Variola virus infectious disease","type":"exact"},{"name":"ordinary smallpox","type":"exact"},{"name":"smallpox virus infection","type":"related"},{"name":"variola virus VAR infection","type":"related"},{"name":"variola virus infection","type":"related"}],"termid":"MONDO:0004651","xrefs":{"Monarch":{"xref_id":"0004651"}}}


id: GO:0120529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-secoisolariciresinol + 2 NAD+ = (-)-matairesinol + 2 H(+) + 2 NADH.","definition_xrefs":["RHEA:33887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"secoisolariciresinol dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-13433","KEGG_REACTION:R10129","EC:1.1.1.331"],"termid":"GO:0120529"}


id: GO:0140216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the directed import of D-aspartate from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:27663541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of D-aspartate import across plasma membrane","termid":"GO:0140215"},{"relation_name":"negatively_regulates","term_name":"D-aspartate import across plasma membrane","termid":"GO:0070779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of D-aspartate import across plasma membrane","termid":"GO:0140216"}


id: MONDO:0002446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemoglobinopathy (obsolete MONDO:0002446)","termid":"MONDO:0002446","xrefs":{"Monarch":{"xref_id":"0002446"}}}


id: FYPO:0004106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, has no septum, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"inviable aseptate vegetative cell","termid":"FYPO:0003931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0000004","FYPO:0005447"],"is_obsolete":false,"name":"inviable multinucleate aseptate vegetative cell","synonyms":[{"name":"inviable multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; multinucleate aseptate vegetative cell","type":"exact"},{"name":"multinucleate aseptate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0004106"}


id: PBO:0050320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 22","termid":"PBO:0050320"}


id: GO:0044159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membranous cellular structure within the host cell that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the host plasma membrane. In eukaryotic host cells they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular organelle","termid":"GO:0033647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host thylakoid","termid":"GO:0044159"}


id: PBO:0080847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 2","termid":"PBO:0080847"}


id: MONDO:0007868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hyperekplexia that has material basis in heterozygous, homozygous, or compound heterozygous mutation in the GLRA1 gene on chromosome 5q32.","definition_xrefs":["DOID:0060696","PMID:8298642","PMID:7881416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperekplexia","termid":"MONDO:0021022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperekplexia 1","secondary_identifiers":["OMIM:149400","MEDGEN:1647581","UMLS:C4551954"],"synonyms":[{"name":"HKPX1","type":"exact"},{"name":"Kok disease","type":"related"},{"name":"Sthe","type":"related"},{"name":"Stiff-Man syndrome, congenital","type":"related"},{"name":"Stiff-Person syndrome, congenital","type":"related"},{"name":"Stiff-baby syndrome","type":"related"},{"name":"exaggerated startle reaction","type":"related"},{"name":"hyperekplexia 1","type":"exact"},{"name":"hyperekplexia type 1","type":"exact"},{"name":"hyperekplexia, hereditary 1","type":"related"},{"name":"hyperekplexia, hereditary type 1","type":"exact"},{"name":"startle disease, familial","type":"related"},{"name":"startle reaction, exaggerated","type":"related"}],"termid":"MONDO:0007868","xrefs":{"Monarch":{"xref_id":"0007868"}}}


id: PBO:0016532
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YHR072W","termid":"PBO:0016532"}


id: FYPO:0006119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in or on actin cables is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to actin cable","synonyms":[{"name":"ectopic protein localization to actin cable","type":"exact"},{"name":"protein mislocalised to actin cable","type":"exact"},{"name":"protein mislocalised to actin cable during vegetative growth","type":"exact"},{"name":"protein mislocalized to actin cable during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to actin cable during vegetative growth","type":"exact"},{"name":"protein mislocalized to formin-nucleated actin cable","type":"exact"}],"termid":"FYPO:0006119"}


id: PBO:0078564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 49D1","termid":"PBO:0078564"}


id: PBO:0003461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NST UDP-N-acetylglucosamine transporter (predicted)","termid":"PBO:0003461"}


id: GO:0043782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cobalt-precorrin 3 + S-adenosyl-L-methionine = cobalt-precorrin 4 + S-adenosyl-L-homocysteine.","definition_xrefs":["MetaCyc:RXN-8761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"cobalt-precorrin-3 C17-methyltransferase activity","secondary_identifiers":["RHEA:26273"],"synonyms":[{"name":"cobalt-precorrin 3 C17-methyltransferase activity","type":"exact"},{"name":"cobalt-precorrin-3 methylase","type":"broad"},{"name":"cobalt-precorrin-3 methyltransferase","type":"broad"},{"name":"cobalt-precorrin-3B C17-methyltransferase activity","type":"exact"}],"termid":"GO:0043782"}


id: FYPO:0004198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein degradation during mitosis","synonyms":[{"name":"decreased protein breakdown during mitosis","type":"exact"},{"name":"decreased protein catabolic process during mitosis","type":"exact"},{"name":"decreased protein catabolism during mitosis","type":"exact"},{"name":"decreased protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein degradation during mitotic M phase","type":"related"},{"name":"decreased protein degradation during mitotic nuclear division","type":"exact"},{"name":"reduced protein degradation during mitosis","type":"exact"}],"termid":"FYPO:0004198"}


id: PR:O74501
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs130 gene.","definition_xrefs":["UniProtKB:O74501","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein CC285.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.14","synonyms":[{"name":"Spom972h-trs130","type":"exact"}],"termid":"PR:O74501"}


id: GO:0033480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-D-galacturonate, a substance composed of galacturonic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-D-galacturonate metabolic process","termid":"GO:0033479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-D-galacturonate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-4"],"synonyms":[{"name":"UDP-D-galacturonate anabolism","type":"exact"},{"name":"UDP-D-galacturonate biosynthesis","type":"exact"},{"name":"UDP-D-galacturonate formation","type":"exact"},{"name":"UDP-D-galacturonate synthesis","type":"exact"}],"termid":"GO:0033480"}


id: PBO:0036426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3a (predicted)","termid":"PBO:0036426"}


id: PBO:0051299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-35 (pseudogene)","termid":"PBO:0051299"}


id: GO:0006364
data:
  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id: PBO:0080369
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id: PBO:0039823
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id: PBO:0086245
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id: SO:0002026
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide sequence which encodes the intein portion of the precursor gene.","definition_xrefs":["PMID:8165123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intein_encoding_region","termid":"SO:0002026"}


id: GO:0102031
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id: PBO:0050058
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id: PBO:0071472
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 13","termid":"PBO:0071472"}


id: MONDO:0030716
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 66","secondary_identifiers":["OMIM:619799","DOID:0070565","MEDGEN:1806298","UMLS:C5676945"],"synonyms":[{"name":"SPGF66","type":"exact"},{"name":"spermatogenic failure 66","type":"exact"}],"termid":"MONDO:0030716","xrefs":{"Monarch":{"xref_id":"0030716"}}}


id: MONDO:0001227
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of tympanitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic otitis media","termid":"MONDO:0021204"},{"relation_name":"is_a","term_name":"tympanitis","termid":"MONDO:0024616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic tympanitis","secondary_identifiers":["SCTID:89723004","DOID:11217","UMLS:C0395849","MEDGEN:583089","ICD9:384.1"],"synonyms":[{"name":"tympanitis, chronic","type":"exact"}],"termid":"MONDO:0001227","xrefs":{"Monarch":{"xref_id":"0001227"}}}


id: PBO:0041907
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene C","termid":"PBO:0041907"}


id: GO:0008403
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-24 of 25-hydroxycholecalciferol (25-hydroxyvitamin D3) to form 24(R),25-dihydroxycholecalciferol.","definition_xrefs":["ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"vitamin D 24-hydroxylase activity","termid":"GO:0070576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"25-hydroxycholecalciferol-24-hydroxylase activity","secondary_identifiers":["GO:0030344","RHEA:24968"],"synonyms":[{"name":"25-hydroxyvitamin D3 24-hydroxylase activity","type":"exact"},{"name":"cytochrome P450 CYP24","type":"narrow"}],"termid":"GO:0008403"}


id: GO:0072590
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-L-aspartate + L-glutamate = ADP + phosphate + N-acetylaspartyl-glutamate.","definition_xrefs":["PMID:20643647","PMID:20657015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"N-acetyl-L-aspartate-L-glutamate ligase activity","secondary_identifiers":["Reactome:R-HSA-8942575"],"termid":"GO:0072590"}


id: GO:0010742
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a monocyte acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:add","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foam cell differentiation","termid":"GO:0090077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage derived foam cell differentiation","termid":"GO:0010742"}


id: GO:0070999
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of gravity in which a sensory mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of gravity","termid":"GO:0009590"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of gravity","termid":"GO:0070998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of gravity","termid":"GO:0070999"}


id: PBO:0043791
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPEB2 divergent transcript","termid":"PBO:0043791"}


id: GO:0047786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5alpha-dihydrocortisone + NADP+ = cortisone + H+ + NADPH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cortisone alpha-reductase activity (obsolete GO:0047786)","synonyms":[{"name":"4,5alpha-dihydrocortisone:NADP+ delta4-oxidoreductase activity","type":"related"},{"name":"NADPH:Delta4-3-oxosteroid-5alpha-oxidoreductase activity","type":"related"},{"name":"cortisone a-reductase activity","type":"exact"},{"name":"cortisone delta4-5alpha-reductase activity","type":"related"},{"name":"delta4-3-ketosteroid reductase (5alpha)","type":"related"},{"name":"delta4-3-oxosteroid-5alpha-reductase","type":"related"},{"name":"delta4-5alpha-reductase activity","type":"related"},{"name":"microsomal steroid reductase (5alpha)","type":"related"}],"termid":"GO:0047786"}


id: PBO:0079100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSSK6 activating cochaperone","termid":"PBO:0079100"}


id: MONDO:0007252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare multiple congenital malformation syndrome characterized by congenital contractures of hand and feet with variable degrees of severity of camptodactyly, clubfoot and, less frequently, cleft palate. Intelligence is normal but in some cases, additional abnormalities, such as short stature, kyphoscoliosis, ptosis, micrognathia, and cryptorchidism may also be present. Gordon syndrome, Marden-Walker syndrome and arthrogryposis with oculomotor limitation and electroretinal anomalies clinically and genetically overlap, and could represent variable expressions of the same condition.","definition_xrefs":["Orphanet:376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gordon syndrome","secondary_identifiers":["MESH:C537288","UMLS:C0220666","NORD:1199","SCTID:237850008","GARD:2553","OMIM:114300","DOID:0111607","MEDGEN:66314","ICD9:579.8"],"synonyms":[{"name":"DA3","type":"related"},{"name":"Gordon syndrome","type":"exact"},{"name":"arthrogryposis distal type 3","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type 2A","type":"related"},{"name":"arthrogryposis, distal, type 3","type":"related"},{"name":"camptodactyly, cleft palate, and clubfoot","type":"related"},{"name":"camptodactyly-cleft palate-clubfoot syndrome","type":"exact"},{"name":"distal arthrogryposis type 3","type":"exact"},{"name":"distal arthrogryposis type IIA","type":"exact"}],"termid":"MONDO:0007252","xrefs":{"Monarch":{"xref_id":"0007252"}}}


id: PBO:0042447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 5","termid":"PBO:0042447"}


id: MONDO:0022918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease that has its basis in the disruption of cytokine activity.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokine deficiency (obsolete MONDO:0022918)","synonyms":[{"name":"cytokine activity disease","type":"exact"},{"name":"disorder of cytokine activity","type":"exact"}],"termid":"MONDO:0022918","xrefs":{"Monarch":{"xref_id":"0022918"}}}


id: PBO:0085314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylglycerolphosphate synthase; catalyzes the synthesis of phosphatidylglycerolphosphate from CDP-diacylglycerol and sn-glycerol 3-phosphate in the first committed and rate-limiting step of cardiolipin biosynthesis","termid":"PBO:0085314"}


id: PBO:0043729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 8","termid":"PBO:0043729"}


id: PBO:0029458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_morphology","termid":"PBO:0029458"}


id: MOD:00140
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phycocyanobilin.","definition_xrefs":["PubMed:3838747","DeltaMass:0","Unimod:387#C","PubMed:16644722","RESID:AA0131","ChEBI:15617","PubMed:7918400","PubMed:3208761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-phycocyanobilin-L-cysteine","synonyms":[{"name":"(2R,3R)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-18-ethyl-1,2,3,19,21,22,24-heptahydro-2,7,13,17-tetramethyl-1,19-dioxo-(21H,22H,24H)-bilin-8,12-dipropanoic acid","type":"exact"},{"name":"(2R,3R)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-18-ethyl-2,7,13,17-tetramethyl-1,2,3,19,21,22,24-heptahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"BINDING Phycocyanobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"PCB","type":"exact"},{"name":"Phycocyanobilin","type":"related"},{"name":"S-Phycocyanobilin (on Cysteine)","type":"exact"},{"name":"S-phycocyanobilin-L-cysteine","type":"exact"},{"name":"phycobilin cysteine","type":"exact"},{"name":"phycocyanobilin","type":"related"},{"name":"phycocyanobilin cysteine adduct","type":"exact"}],"termid":"MOD:00140"}


id: GO:0004169
data:
  {"annotated_genes":["SJAG_04053","SJAG_01491","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69555,74615,76919],"is_not":false,"summary":null,"term":"GO:0004169"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein.","definition_xrefs":["GOC:pr","EC:2.4.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5615604","Reactome:R-HSA-5615637","MetaCyc:2.4.1.109-RXN","Reactome:R-HSA-5615556"],"synonyms":[{"name":"O-glycoside mannosyltransferase","type":"broad"},{"name":"dolichol phosphomannose-protein mannosyltransferase activity","type":"related"},{"name":"dolichyl-phosphate-D-mannose:protein O-D-mannosyltransferase activity","type":"related"},{"name":"dolichyl-phosphate-mannose-protein O-mannosyltransferase activity","type":"exact"},{"name":"protein O-D-mannosyltransferase activity","type":"related"},{"name":"protein O-mannosyltransferase activity","type":"exact"}],"termid":"GO:0004169","terms_by_termid":{"GO:0004169":null}}


id: PBO:0003222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S29 (predicted)","termid":"PBO:0003222"}


id: PBO:0018242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med13","termid":"PBO:0018242"}


id: PBO:0004597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6 (predicted)","termid":"PBO:0004597"}


id: PBO:0031168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_amino_acid_import","termid":"PBO:0031168"}


id: PBO:0054805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2218","termid":"PBO:0054805"}


id: PBO:0075299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous ovarian cancer associated RNA","termid":"PBO:0075299"}


id: GO:1902338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["PMID:12202035","GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"down regulation of apoptosis involved in development","type":"related"},{"name":"down regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"down regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"down regulation of morphogenetic apoptosis","type":"related"},{"name":"down-regulation of apoptosis involved in development","type":"related"},{"name":"down-regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"down-regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"down-regulation of morphogenetic apoptosis","type":"related"},{"name":"downregulation of apoptosis involved in development","type":"related"},{"name":"downregulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"downregulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"downregulation of morphogenetic apoptosis","type":"related"},{"name":"inhibition of apoptosis involved in development","type":"related"},{"name":"inhibition of apoptosis involved in morphogenesis","type":"narrow"},{"name":"inhibition of apoptotic process involved in morphogenesis","type":"narrow"},{"name":"inhibition of morphogenetic apoptosis","type":"related"},{"name":"negative regulation of apoptosis involved in development","type":"related"},{"name":"negative regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"negative regulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902338"}


id: MONDO:0015833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudounicornuate uterus is a rare, non-syndromic uterovaginal malformation characterized by a crescent-shaped, small-sized uterus containing a single horn and fallopian tube associated with a rudimentary second horn (which can be solid or contain a cavity with functioning endometrium and be communicating or non-communicating). Urinary tract anomalies are frequently associated.","definition_xrefs":["Orphanet:180079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral aplasia of the mullerian ducts","termid":"MONDO:0015831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudounicornuate uterus","secondary_identifiers":["MEDGEN:1657403","GARD:20175","UMLS:C4749300"],"synonyms":[{"name":"incomplete unilateral Mullerian aplasia","type":"exact"},{"name":"incomplete unilateral Müllerian aplasia","type":"exact"},{"name":"incomplete unilateral aplasia of the Mullerian ducts","type":"exact"},{"name":"incomplete unilateral aplasia of the Müllerian ducts","type":"exact"},{"name":"unicornuate uterus with rudimentary horn","type":"exact"}],"termid":"MONDO:0015833","xrefs":{"Monarch":{"xref_id":"0015833"}}}


id: GO:0050533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol hexakisphosphate + H2O = 1D-myo-inositol 1,2,3,4,6-pentakisphosphate + phosphate.","definition_xrefs":["RHEA:13001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"5-phytase activity","secondary_identifiers":["EC:3.1.3.72","MetaCyc:3.1.3.72-RXN"],"synonyms":[{"name":"myo-inositol-hexakisphosphate 5-phosphohydrolase activity","type":"related"}],"termid":"GO:0050533"}


id: PBO:0055687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoyl(octanoyl) transferase 2","termid":"PBO:0055687"}


id: MONDO:1010779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia areata that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia areata, non-human animal","termid":"MONDO:1010140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia areata, domestic cat","secondary_identifiers":["OMIA:001702-9685"],"termid":"MONDO:1010779","xrefs":{"Monarch":{"xref_id":"1010779"}}}


id: PBO:0086051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function required for growth on ethanol; contains a zinc finger region and has homology to human BRAP2, which is a cytoplasmic protein that binds nuclear localization sequences","termid":"PBO:0086051"}


id: MONDO:0009963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulbright-Hodes syndrome is characterized by renal dysplasia, growth retardation, phocomelia or mesomelia, radiohumeral fusion, rib abnormalities, anomalies of the external genitalia and a potter-like facies. The syndrome has been described in three infants (one pair of sibs and an unrelated case), all of whom died shortly after birth from respiratory distress resulting from pulmonary hypoplasia and oligohydramnios caused by renal dysplasia. The mode of transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:3404"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ulbright-Hodes syndrome","secondary_identifiers":["OMIM:266910","MEDGEN:376585","MESH:C537754","GARD:5394","SCTID:719840003","UMLS:C1849438"],"synonyms":[{"name":"RL syndrome","type":"related"},{"name":"Ulbright Hodes syndrome","type":"related"},{"name":"renal dysplasia limb defects syndrome","type":"related"},{"name":"renal dysplasia, mesomelia, and radiohumeral fusion","type":"related"},{"name":"renal dysplasia-limb defects syndrome","type":"exact"},{"name":"renal dysplasia-mesomelia-radiohumeral fusion syndrome","type":"exact"}],"termid":"MONDO:0009963","xrefs":{"Monarch":{"xref_id":"0009963"}}}


id: PBO:0079128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSHZ3 antisense RNA 1","termid":"PBO:0079128"}


id: PBO:0039010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFF4 divergent transcript","termid":"PBO:0039010"}


id: PBO:0043119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic iron-sulfur assembly component 3","termid":"PBO:0043119"}


id: PATO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's exhbiting the morphological characteristics of a gland.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glandular","termid":"PATO:0002117"}


id: FYPO:0001201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to calcium ion starvation","synonyms":[{"name":"decreased growth during cellular response to calcium ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to calcium ion starvation","type":"exact"},{"name":"hypersensitive to calcium ion starvation","type":"exact"},{"name":"reduced growth in low calcium","type":"related"},{"name":"sensitive to calcium ion depletion","type":"exact"},{"name":"sensitive to calcium ion deprivation","type":"exact"},{"name":"sensitive to calcium ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to calcium starvation","type":"exact"}],"termid":"FYPO:0001201"}


id: FYPO:0004487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased protein acetylation during vegetative growth","synonyms":[{"name":"increased protein acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004487"}


id: MONDO:0010134
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85461,85462],"is_not":false,"summary":null,"term":"MONDO:0010134"}]},"cv_name":"mondo","definition":"Pendred syndrome (PDS) is a clinically variable genetic disorder characterized by bilateral sensorineural hearing loss and euthyroid goiter.","definition_xrefs":["Orphanet:705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Pendred syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060744","OMIM:274600","UMLS:C0271829","MESH:C536648","NCIT:C121745","icd11.foundation:1156056623","MEDGEN:82890","GARD:4271","NORD:2030","SCTID:70348004"],"synonyms":[{"name":"PDS","type":"related"},{"name":"Pendred syndrome","type":"exact"},{"name":"TDH2B","type":"exact"},{"name":"autosomal recessive sensorineural hearing impairment and goiter","type":"related"},{"name":"autosomal recessive sensorineural hearing impairment and goitre","type":"related"},{"name":"congenital hypothyroidism due to dyshormonogenesis 2B","type":"exact"},{"name":"deafness with goiter","type":"exact"},{"name":"deafness with goitre","type":"exact"},{"name":"genetic defect in thyroid hormonogenesis 2B","type":"exact"},{"name":"goiter-deafness syndrome","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 2B","type":"exact"},{"name":"thyroid dyshormonogenesis 2B","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 2B","type":"exact"}],"termid":"MONDO:0010134","terms_by_termid":{"MONDO:0010134":null},"xrefs":{"Monarch":{"xref_id":"0010134"}}}


id: PBO:0111333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal nucleolar protein, implicated in rDNA metabolism or ribosome biogenesis","termid":"PBO:0111333"}


id: PBO:0001124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex subunit Vps16 (predicted)","termid":"PBO:0001124"}


id: PBO:0087450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that associates with actin filaments; forms a complex with Tda2p that inhibits barbed end F-actin assembly; elevates actin monomer pools to increase endocytotic efficiency and to regulate the distribution of actin between cables and patches; Aim21p/Tda2p forms a larger complex with actin capping proteins Cap1p and Cap2p; involved in mitochondrial migration along actin filaments; recruited to cortical actin patches by SH3 domain-containing proteins Bbc1p and Abp1p","termid":"PBO:0087450"}


id: GO:0070705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of one or more nucleotides.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA nucleotide insertion","termid":"GO:0070705"}


id: PBO:0064506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit G","termid":"PBO:0064506"}


id: PBO:0005652
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.17","termid":"PBO:0005652"}


id: GO:0050373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-L-arabinose = UDP-alpha-D-xylose.","definition_xrefs":["EC:5.1.3.5","RHEA:11320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-arabinose 4-epimerase activity","secondary_identifiers":["MetaCyc:UDP-ARABINOSE-4-EPIMERASE-RXN","KEGG_REACTION:R01473"],"synonyms":[{"name":"UDP arabinose epimerase activity","type":"related"},{"name":"UDP-D-xylose 4-epimerase activity","type":"related"},{"name":"UDP-D-xylose-4-epimerase activity","type":"exact"},{"name":"UDP-L-arabinose 4-epimerase activity","type":"related"},{"name":"UDParabinose 4-epimerase activity","type":"related"},{"name":"uridine 5'-diphosphate-D-xylose 4-epimerase activity","type":"related"},{"name":"uridine diphosphoarabinose epimerase activity","type":"related"}],"termid":"GO:0050373"}


id: PBO:0048658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GK antisense RNA 1","termid":"PBO:0048658"}


id: GO:0043394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proteoglycan, any glycoprotein in which the carbohydrate units are glycosaminoglycans.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"proteoglycan binding","termid":"GO:0043394"}


id: PBO:0073995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3 pseudogene 2","termid":"PBO:0073995"}


id: MONDO:0002153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A scalp hair loss condition characterized by excessive shedding of hair in the resting phase of growth, usually following a fever or major body stress.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telogen effluvium","secondary_identifiers":["ICD10CM:L65.0","DOID:1943","ICD9:704.02","UMLS:C0263518","icd11.foundation:1188535025","MEDGEN:537938","SCTID:39479004","NCIT:C112200"],"termid":"MONDO:0002153","xrefs":{"Monarch":{"xref_id":"0002153"}}}


id: GO:0005202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete collagen (obsolete GO:0005202)","synonyms":[{"name":"collagen","type":"exact"}],"termid":"GO:0005202"}


id: GO:0099619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + UDP-4-amino-4-deoxy-beta-L-arabinopyranose = 5,6,7,8-tetrahydrofolate + UDP-4-deoxy-4-formamido-beta-L-arabinopyranose.","definition_xrefs":["PMID:17928292","PMID:15695810","PMID:15807526","PMID:15809294","PMID:15939024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"UDP-4-amino-4-deoxy-L-arabinose formyltransferase activity","secondary_identifiers":["EC:2.1.2.13","RHEA:24706"],"synonyms":[{"name":"10-formyltetrahydrofolate:UDP-4-amino-4-deoxy-beta-L-arabinose N-formyltransferase activity","type":"exact"},{"name":"ArnAFT activity","type":"exact"},{"name":"UDP-L-Ara4N formyltransferase activity","type":"exact"}],"termid":"GO:0099619"}


id: PBO:0087393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S/T protein kinase; regulates polarized exocytosis and the Ire1p-mediated unfolded protein response; regulates HAC1 mRNA translocation, splicing and translation with KIN2 during ER stress; direct phosphorylation of the substrate Sec9p (S190) is enhanced by prior substrate priming (S192); localizes to the cytoplasmic face of the plasma membrane; activation loop phosphorylation (T302) required for full kinase activity; orthologous to MARK/PAR-1, AMP-activated protein kinase (AMPK) family members","termid":"PBO:0087393"}


id: PBO:0109637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase E like (pseudogene)","termid":"PBO:0109637"}


id: PR:Q9UT48
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10410:SF3","OMA:SCHPO00392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit H (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.05","secondary_identifiers":["UniProtKB:Q9UT48"],"synonyms":[{"name":"Spom972h-EIF3H","type":"exact"},{"name":"eIF3h (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT48"}


id: FYPO:0001573
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to rapamycin is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to rapamycin","synonyms":[{"name":"increased RNA accumulation during cellular response to rapamycin","type":"related"},{"name":"increased RNA level during cellular response to rapamycin during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to rapamycin during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to rapamycin","type":"narrow"},{"name":"increased transcript level during cellular response to rapamycin","type":"exact"}],"termid":"FYPO:0001573"}


id: GO:0097302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways by which diacylglyceryl transfer leads to formation of a water-soluble protein-lipid complex.","definition_xrefs":["GOC:pde","GOC:yaf","UniPathway:UPA00664"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein biosynthetic process via diacylglyceryl transfer (obsolete GO:0097302)","synonyms":[{"name":"lipoprotein biosynthesis (diacylglyceryl transfer)","type":"exact"}],"termid":"GO:0097302"}


id: PBO:0112981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); directly phosphorylated by TORC1 in a Pib2-dependent manner; localizes to the cytoplasm; ER3 has a paralog, SER33, that arose from the whole genome duplication","termid":"PBO:0112981"}


id: PBO:0011512
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.64","termid":"PBO:0011512"}


id: PBO:0051412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-50 (non-functional)","termid":"PBO:0051412"}


id: PATO:0002009
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the degree to which there are subdivisions or offshoots in a bearer entity.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchiness","termid":"PATO:0002009"}


id: GO:0050776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immune response","secondary_identifiers":["Reactome:R-HSA-198933"],"termid":"GO:0050776"}


id: RO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x distributary_of y if and only if x is capable of channeling the flow of a substance to y, where y channels less of the substance than x","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distributary_of","termid":"RO:0002377"}


id: PBO:0050681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 8","termid":"PBO:0050681"}


id: MONDO:1040051
data:
  {"annotated_genes":["SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013454"},{"annotations":[86097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008379"}]},"cv_name":"mondo","definition":"Any retinopathy caused by a variant in the IMPDH1 gene.","definition_xrefs":["PMID:11875049","PMID:37259572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"IMPDH1-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"IMPDH1-related retinopathy","type":"exact"}],"termid":"MONDO:1040051","terms_by_termid":{"MONDO:0008379":null,"MONDO:0013454":null},"xrefs":{"Monarch":{"xref_id":"1040051"}}}


id: MONDO:0008053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 2, autosomal dominant","secondary_identifiers":["MESH:C563541","UMLS:C1834531","MEDGEN:331770","OMIM:160700"],"synonyms":[{"name":"MYP2","type":"exact"},{"name":"myopia 2, autosomal dominant","type":"exact"}],"termid":"MONDO:0008053","xrefs":{"Monarch":{"xref_id":"0008053"}}}


id: PBO:0026689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tamoxifen","termid":"PBO:0026689"}


id: PBO:0113102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase involved in rDNA replication and Ty1 transposition; binds to and suppresses DNA damage at G4 motifs in vivo; relieves replication fork pauses at telomeric regions; deletion or inactivation of helicase function suppresses chromosome instability (CIN) associated with centromere or kinetochore defects; structurally and functionally related to Pif1p","termid":"PBO:0113102"}


id: PBO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonicaciduria","termid":"PBO:0000195"}


id: PBO:0030021
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_asymmetric_protein_localization_to_old_or_new_mitotic_spindle_pole_body_during_anaphase,_with_protein_symmetrically_localized_to_both_spindle_pole_bodies","termid":"PBO:0030021"}


id: GO:0016433
data:
  {"annotated_genes":["SJAG_03713","SJAG_03289","SJAG_01958","SJAG_03016","SJAG_02821"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76927],"is_not":false,"summary":null,"term":"GO:0016433"},{"annotations":[68219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"},{"annotations":[94949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"},{"annotations":[98161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106142"},{"annotations":[59541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000179"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methyladenine.","definition_xrefs":["GOC:go-curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01958":null,"SJAG_02821":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"rRNA (adenine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0016433","terms_by_termid":{"GO:0000179":null,"GO:0016433":null,"GO:0052907":null,"GO:0052909":null,"GO:0106142":null}}


id: PBO:0026990
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrion","termid":"PBO:0026990"}


id: MONDO:0010886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal anomaly involving deletion of chromosome band 2q37 and manifests as three major clinical findings: developmental delay, skeletal malformations and facial dysmorphism.","definition_xrefs":["Orphanet:1001"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2q37 microdeletion syndrome","secondary_identifiers":["GARD:10202","DECIPHER:44","ICD9:758.39","MESH:C538317","NCIT:C129021","OMIM:600430","SCTID:702357000","UMLS:C2931817","MEDGEN:419169","DOID:0111704"],"synonyms":[{"name":"2q37 deletion syndrome","type":"related"},{"name":"2q37 microdeletion syndrome","type":"exact"},{"name":"2q37 monosomy","type":"exact"},{"name":"Albright hereditary osteodystrophy type 3","type":"exact"},{"name":"Albright hereditary osteodystrophy-like syndrome","type":"exact"},{"name":"BDMR","type":"exact"},{"name":"Del(2)(q37)","type":"exact"},{"name":"brachydactyly intellectual disability syndrome","type":"exact"},{"name":"brachydactyly mental retardation syndrome","type":"exact"},{"name":"brachydactyly-intellectual disability syndrome","type":"exact"},{"name":"brachydactyly-mental retardation syndrome","type":"related"},{"name":"chromosome 2q37 deletion syndrome","type":"related"},{"name":"deletion 2q37","type":"exact"},{"name":"deletion 2q37-qter","type":"exact"},{"name":"monosomy 2q37-qter","type":"exact"}],"termid":"MONDO:0010886","xrefs":{"Monarch":{"xref_id":"0010886"}}}


id: MONDO:0009070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic disorder characterized by D-glyceric acid excretion. It has been described in several patients. Clinical findings include progressive neurological impairment, hypotonia, seizures, failure to thrive and metabolic acidosis. Some patients had hyperglycinemia secondary to the organic acidemia. However, some of the reported patients were asymptomatic. D-glyceric aciduria is caused by D-glycerate kinase deficiency. The GLYCTK gene has been mapped to 3p21.","definition_xrefs":["Orphanet:941"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of glyoxylate metabolism","termid":"MONDO:0017703"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"D-glyceric aciduria","secondary_identifiers":["OMIM:220120","DOID:0111626","SCTID:237980004","MEDGEN:452447","MESH:C535767","GARD:234","NCIT:C128804","UMLS:C0342765"],"synonyms":[{"name":"D-glycerate kinase deficiency","type":"exact"},{"name":"D-glyceric acidemia","type":"exact"},{"name":"D-glycericacidemia","type":"related"},{"name":"d-glyceric aciduria","type":"exact"},{"name":"glycerate kinase deficiency","type":"related"},{"name":"non ketotic hyperglycinemia syndrome","type":"related"}],"termid":"MONDO:0009070","xrefs":{"Monarch":{"xref_id":"0009070"}}}


