# terms

id: GO:0061506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is not coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA topoisomerase type II (ATP-independent) activity (obsolete GO:0061506)","termid":"GO:0061506"}


id: PBO:0012247
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae pma1","termid":"PBO:0012247"}


id: MONDO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the wall of the jejunum. Representative examples include adenoma, carcinoma, and lymphoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"jejunal neoplasm","secondary_identifiers":["MESH:D007580","NCIT:C8401","SCTID:126834003","DOID:3218","UMLS:C0022374","MEDGEN:7187"],"synonyms":[{"name":"jejunal tumor","type":"exact"},{"name":"jejunal tumour","type":"exact"},{"name":"jejunum neoplasm","type":"exact"},{"name":"jejunum neoplasm (disease)","type":"exact"},{"name":"jejunum tumor","type":"exact"},{"name":"jejunum tumour","type":"exact"},{"name":"neoplasm of jejunum","type":"exact"},{"name":"neoplasm of the jejunum","type":"exact"},{"name":"tumor of jejunum","type":"exact"},{"name":"tumor of the jejunum","type":"exact"},{"name":"tumour of jejunum","type":"exact"},{"name":"tumour of the jejunum","type":"exact"}],"termid":"MONDO:0002564","xrefs":{"Monarch":{"xref_id":"0002564"}}}


id: GO:0071332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fructose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fructose","termid":"GO:0009750"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fructose stimulus","termid":"GO:0071332"}


id: PR:Q9C0X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC12C2.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12C2.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.14c","synonyms":[{"name":"Spom972h-SPBC12C2.14c","type":"exact"}],"termid":"PR:Q9C0X4"}


id: GO:0004967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glucagon and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:signaling","GOC:mah","PMID:22438981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"glucagon receptor activity","termid":"GO:0004967"}


id: MONDO:0010592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by a polymorphic cutaneous disorder and highly variable anomalies affecting the eyes, teeth, skeleton and the central nervous, urinary, gastrointestinal and cardiovascular systems.","definition_xrefs":["Orphanet:2092"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"excluded_subClassOf","term_name":"mixed dermis disorder","termid":"MONDO:0019294"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal dermal hypoplasia","secondary_identifiers":["MEDGEN:42055","MESH:D005489","NCIT:C84715","icd11.foundation:683166625","OMIM:305600","GARD:6457","ICD9:757.39","SCTID:205573006","DOID:2120","UMLS:C0016395","NORD:1152"],"synonyms":[{"name":"DHOF","type":"related"},{"name":"FDH","type":"related"},{"name":"Fodh","type":"related"},{"name":"Goltz Gorlin syndrome","type":"related"},{"name":"Goltz syndrome","type":"exact"},{"name":"Goltz-Gorlin syndrome","type":"exact"},{"name":"focal dermal hypoplasia","type":"exact"},{"name":"focal dermal hypoplasia, X-linked dominant","type":"exact"}],"termid":"MONDO:0010592","xrefs":{"Monarch":{"xref_id":"0010592"}}}


id: MONDO:0019248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of inherited lysosomal storage diseases characterized by accumulation of lipids and carbohydrates in the tissues, resulting in mental disabilities and skeletal malformations.","definition_xrefs":["NCIT:C61267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"glycoproteinosis","termid":"MONDO:0017731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"mucolipidosis","secondary_identifiers":["GARD:18975","MEDGEN:7731","SCTID:70528007","UMLS:C0026697","MESH:D009081","icd11.foundation:714623911","Orphanet:79212","DOID:0080488"],"termid":"MONDO:0019248","xrefs":{"Monarch":{"xref_id":"0019248"}}}


id: PBO:0059371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 4","termid":"PBO:0059371"}


id: PBO:0079614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 J2","termid":"PBO:0079614"}


id: MONDO:0018961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial melanoma (FM) is a rare inherited form of melanoma characterized by development of histologically confirmed melanoma in two first degrees relatives or more relatives in an affected family.","definition_xrefs":["Orphanet:618"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited skin tumor (obsolete MONDO:0015950)","termid":"MONDO:0015950"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"excluded_subClassOf","term_name":"obsolete pigmented palpebral tumor (obsolete MONDO:0020177)","termid":"MONDO:0020177"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial melanoma","secondary_identifiers":["DOID:6846","UMLS:C1512419","MEDGEN:268851","GARD:3460","NCIT:C8498"],"synonyms":[{"name":"hereditary melanoma (disease)","type":"exact"}],"termid":"MONDO:0018961","xrefs":{"Monarch":{"xref_id":"0018961"}}}


id: PBO:0063940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl cis/trans isomerase, NIMA-interacting 1","termid":"PBO:0063940"}


id: MONDO:0024270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections of the INTESTINES with PARASITES, commonly involving PARASITIC WORMS. Infections with roundworms (NEMATODE INFECTIONS) and tapeworms (CESTODE INFECTIONS) are also known as HELMINTHIASIS.","definition_xrefs":["MESH:D007411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"parasitic intestinal disorder","secondary_identifiers":["EFO:0009561","UMLS:C0021832","MEDGEN:7131"],"synonyms":[{"name":"disease, parasitic intestinal","type":"related"},{"name":"diseases, parasitic intestinal","type":"related"},{"name":"intestinal disease, parasitic","type":"related"},{"name":"intestine parasitic infection","type":"exact"},{"name":"parasitic intestinal disease","type":"exact"},{"name":"parasitic intestinal diseases","type":"related"}],"termid":"MONDO:0024270","xrefs":{"Monarch":{"xref_id":"0024270"}}}


id: PBO:0051089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1P (pseudogene)","termid":"PBO:0051089"}


id: PBO:0075912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 4","termid":"PBO:0075912"}


id: GO:0052634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a C-19 gibberellin + 2-oxoglutarate + O2 = a C-19 2-beta-hydroxygibberellin + succinate + CO2. C-19 gibberellin refers to a gibberellin with nineteen carbons.","definition_xrefs":["GOC:kad","PMID:12509528"],"gene_count":0,"genotype_count":0,"name":"obsolete C-19 gibberellin 2-beta-dioxygenase activity (obsolete GO:0052634)","synonyms":[{"name":"(C-19 gibberellin-1),2-oxoglutarate:oxygen oxidoreductase (2beta-hydroxylating)","type":"exact"},{"name":"C(19) gibberellin 2-oxidase activity","type":"exact"},{"name":"C-19 GA 2-oxidase activity","type":"exact"},{"name":"C-19 gibberellin 2-beta-hydroxylase activity","type":"exact"},{"name":"C-19 gibberellin 2-oxidase activity","type":"exact"},{"name":"C-19 gibberellin 2beta-dioxygenase activity","type":"exact"},{"name":"C-19 gibberellin 2beta-hydroxylase activity","type":"exact"}],"termid":"GO:0052634"}


id: PR:Q9UUG3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dph4 gene.","definition_xrefs":["UniProtKB:Q9UUG3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.05c","synonyms":[{"name":"Spom972h-dph4","type":"exact"}],"termid":"PR:Q9UUG3"}


id: PBO:0059524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded heavy strand origin of replication","termid":"PBO:0059524"}


id: PBO:0048883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 2","termid":"PBO:0048883"}


id: PATO:0002280
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's possessing a broad surface in articulation with another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"articulated with","termid":"PATO:0002278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broadly articulated with","termid":"PATO:0002280"}


id: GO:0051574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 methylation (obsolete GO:0051574)","synonyms":[{"name":"activation of histone H3-K9 methylation","type":"narrow"},{"name":"stimulation of histone H3-K9 methylation","type":"narrow"},{"name":"up regulation of histone H3-K9 methylation","type":"exact"},{"name":"up-regulation of histone H3-K9 methylation","type":"exact"},{"name":"upregulation of histone H3-K9 methylation","type":"exact"}],"termid":"GO:0051574"}


id: PBO:0067689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal N1","termid":"PBO:0067689"}


id: MONDO:0044657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"MME-related autosomal dominant Charcot Marie Tooth disease type 2","secondary_identifiers":["GARD:17916","MEDGEN:1798873","Orphanet:497757","UMLS:C5567450"],"synonyms":[{"name":"MME-related autosomal dominant CMT2","type":"exact"},{"name":"MME-related autosomal dominant hereditary motor and sensory neuropathy type 2","type":"exact"}],"termid":"MONDO:0044657","xrefs":{"Monarch":{"xref_id":"0044657"}}}


id: PBO:0116409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 5","termid":"PBO:0116409"}


id: PBO:0062060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily X member 1 pseudogene","termid":"PBO:0062060"}


id: PR:Q9HDY4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1A10.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDY4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase PB1A10.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.06c","synonyms":[{"name":"Spom972h-SPAPB1A10.06c","type":"exact"}],"termid":"PR:Q9HDY4"}


id: PBO:0034041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-partner_in","termid":"PBO:0034041"}


id: MONDO:0015883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hidrotic ectodermal dysplasia, Halal type is a form of ectodermal dysplasia syndrome characterized by trichodysplasia, with absent eyebrows and eyelashes, onychodysplasia, mild retrognathia, abnormal dermatoglyphics (excess of whorls on fingertips, radial loop on finger, hypothenar pattern), intellectual disability and normal teeth and sweating. Additional variable manifestations include high implanted or prominent ears, mild hearing loss, supernumerary nipple, cafC)-au-lait spots, keratosis pilaris, and irregular menses. To date, four individuals from 2 generations of a consanguineous family of Portuguese descent have been described in the literature. Males and females were equally affected. Hidrotic ectodermal dysplasia, Halal type is inherited in an autosomal recessive manner.","definition_xrefs":["Orphanet:1809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidrotic ectodermal dysplasia, Halal type","secondary_identifiers":["MEDGEN:443941","MESH:C535621","UMLS:C2930953","SCTID:721147000","GARD:280","icd11.foundation:1668450131"],"synonyms":[{"name":"Halal Setton Wang syndrome","type":"related"},{"name":"Halal-Setton-Wang syndrome","type":"exact"},{"name":"ectodermal dysplasia with skin anomalies and intellectual disability","type":"exact"},{"name":"hidrotic ectodermal dysplasia Halal type","type":"related"},{"name":"trichodysplasia-abnormal dermatoglyphics-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0015883","xrefs":{"Monarch":{"xref_id":"0015883"}}}


id: PBO:0046497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERH mRNA splicing and mitosis factor","termid":"PBO:0046497"}


id: PBO:0082998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic protein required for sporulation","termid":"PBO:0082998"}


id: PBO:0062826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress induced growth inhibitor 1","termid":"PBO:0062826"}


id: PBO:0088380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate reductase","termid":"PBO:0088380"}


id: PBO:0047475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 2","termid":"PBO:0047475"}


id: GO:1904646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["PMID:23555824","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to amyloid-beta","termid":"GO:1904645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amyloid-beta","synonyms":[{"name":"cellular response to beta-amyloid","type":"exact"},{"name":"cellular response to beta-amyloids","type":"related"}],"termid":"GO:1904646"}


id: PBO:0054308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1700","termid":"PBO:0054308"}


id: GO:0047203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 13-hydroxylupanine + 2-methylcrotonoyl-CoA = 13-(2-methylcrotonoyloxy)lupanine + CoA.","definition_xrefs":["RHEA:12360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"13-hydroxylupinine O-tigloyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8694","EC:2.3.1.93","KEGG_REACTION:R04205"],"synonyms":[{"name":"(E)-2-methylcrotonoyl-CoA:13-hydroxylupinine O-2-methylcrotonoyltransferase activity","type":"related"},{"name":"13-hydroxylupanine acyltransferase activity","type":"related"},{"name":"tigloyl-CoA:13-hydroxylupanine O-tigloyltransferase activity","type":"related"}],"termid":"GO:0047203"}


id: PBO:0046543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FH21 member 1","termid":"PBO:0046543"}


id: PBO:0068381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 182","termid":"PBO:0068381"}


id: GO:0070809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Hulle cell development, a process that leads to the formation of Hulle cells. Hulle cells are specialized multinucleate cells that originate from a nest-like aggregation of hyphae during sexual development and serve as nurse cells to the developing cleistothecium, or fruiting body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of Hulle cell development","termid":"GO:0070808"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"Hulle cell development","termid":"GO:0070792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Hulle cell development","termid":"GO:0070809"}


id: GO:0008516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: hexose(out) = hexose(in).","definition_xrefs":["TC:2.A.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"},{"relation_name":"is_a","term_name":"uniporter activity","termid":"GO:0015292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"hexose uniporter activity","termid":"GO:0008516"}


id: GO:0046880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of follicle-stimulating hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonadotropin secretion","termid":"GO:0032276"},{"relation_name":"regulates","term_name":"follicle-stimulating hormone secretion","termid":"GO:0046884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of follicle-stimulating hormone secretion","synonyms":[{"name":"regulation of FSH secretion","type":"exact"},{"name":"regulation of follicle stimulating hormone secretion","type":"exact"}],"termid":"GO:0046880"}


id: MONDO:0008649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"venular insufficiency, systemic","secondary_identifiers":["MEDGEN:348623","UMLS:C1860465","OMIM:192700","MESH:C566004"],"synonyms":[{"name":"venular insufficiency, systemic","type":"exact"}],"termid":"MONDO:0008649","xrefs":{"Monarch":{"xref_id":"0008649"}}}


id: GO:0031264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of signaling proteins with a death receptor upon ligand binding. The complex includes procaspases and death domain-containing proteins in addition to the ligand-bound receptor, and may control the activation of caspases 8 and 10.","definition_xrefs":["PMID:12628743","PMID:12655293","GOC:mtg_apoptosis","PMID:8521815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"death-inducing signaling complex","secondary_identifiers":["Wikipedia:Death-inducing_signaling_complex"],"synonyms":[{"name":"DISC","type":"exact"},{"name":"DISC protein complex","type":"exact"},{"name":"death receptor-induced signaling complex","type":"exact"},{"name":"death receptor-induced signalling complex","type":"exact"},{"name":"death-inducing signalling complex","type":"exact"}],"termid":"GO:0031264"}


id: GO:0102549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:0-monogalactosyldiacylglycerol + H2O = sn-1-lyso-2-16:0-monogalactosyldiacylglycerol + oleate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:0-monogalactosyldiacylglycerol lipase activity (obsolete GO:0102549)","termid":"GO:0102549"}


id: PBO:0060419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylated alpha-linked acidic dipeptidase 2","termid":"PBO:0060419"}


id: GO:0035962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-13 stimulus.","definition_xrefs":["PMID:20100461","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-13","synonyms":[{"name":"response to IL-13","type":"exact"}],"termid":"GO:0035962"}


id: MONDO:0017384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A widespread acute rash characterized by fever and multiple small pustules on a reddish background.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acute generalized exanthematous pustulosis","secondary_identifiers":["ICD9:709.8","UMLS:C0877055","MedDRA:10048799","GARD:21164","NCIT:C112122","MEDGEN:209091","MESH:D056150","SCTID:702617007","Orphanet:293173"],"synonyms":[{"name":"AGEP","type":"exact"},{"name":"pustular drug eruption","type":"exact"},{"name":"toxic pustuloderma","type":"exact"}],"termid":"MONDO:0017384","xrefs":{"Monarch":{"xref_id":"0017384"}}}


id: GO:0010464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"}


id: MONDO:0033636
data:
  {"annotated_genes":["SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85502],"is_not":false,"summary":null,"term":"MONDO:0033636"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1748100","OMIM:619048","GARD:16405","DOID:0070493","UMLS:C5436683"],"synonyms":[{"name":"MC4DN4","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 4","type":"exact"}],"termid":"MONDO:0033636","terms_by_termid":{"MONDO:0033636":null},"xrefs":{"Monarch":{"xref_id":"0033636"}}}


id: PBO:0082529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall glycoprotein involved in beta-glucan assembly; serves as a K1 killer toxin membrane receptor","termid":"PBO:0082529"}


id: PBO:0039365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion molecule with Ig like domain 1","termid":"PBO:0039365"}


id: PBO:0052628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 6B","termid":"PBO:0052628"}


id: GO:0006309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments.","definition_xrefs":["PMID:15723341","GOC:tb","PMID:23379520","GOC:mah","GOC:mtg_apoptosis","ISBN:0721639976","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA catabolic process","termid":"GO:0006308"},{"relation_name":"part_of","term_name":"apoptotic nuclear changes","termid":"GO:0030262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"apoptotic DNA fragmentation","secondary_identifiers":["GO:0008178","Reactome:R-HSA-140342"],"synonyms":[{"name":"DNA catabolic process during apoptosis","type":"exact"},{"name":"DNA catabolism during apoptosis","type":"exact"},{"name":"DNA fragmentation","type":"broad"},{"name":"DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"chromatinolysis","type":"broad"},{"name":"endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"}],"termid":"GO:0006309"}


id: PBO:0036060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein-protein_interaction","termid":"PBO:0036060"}


id: MONDO:0013041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical hemolytic uremic syndrome with complement gene abnormality","termid":"MONDO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with I factor anomaly","secondary_identifiers":["MEDGEN:414542","Orphanet:93580","GARD:18553","UMLS:C2752039","OMIM:612923"],"synonyms":[{"name":"AHUS3","type":"related"},{"name":"D-HUS with I factor anomaly","type":"exact"},{"name":"aHUS with I factor anomaly","type":"exact"},{"name":"aHUS, susceptibility to, 3","type":"related"},{"name":"aHUS3","type":"related"},{"name":"atypical HUS with I factor anomaly","type":"exact"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, 3","type":"related"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, type 3","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with I factor anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with I factor anomaly","type":"exact"},{"name":"susceptibility to atypical hemolytic uremic syndrome 3","type":"related"}],"termid":"MONDO:0013041","xrefs":{"Monarch":{"xref_id":"0013041"}}}


id: MONDO:0003946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma that arises from the vagina and is characterized by a villous architectural pattern.","definition_xrefs":["NCIT:C40259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"vaginal adenoma","termid":"MONDO:0003434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal villous adenoma","secondary_identifiers":["DOID:6613","MEDGEN:275577","UMLS:C1519936"],"synonyms":[{"name":"vagina villous adenoma","type":"exact"},{"name":"vaginal villous adenoma","type":"exact"}],"termid":"MONDO:0003946","xrefs":{"Monarch":{"xref_id":"0003946"}}}


id: FYPO:0000227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chromosome segregation phenotype observed in the vegetative growth phase of the life cycle in which one or more chromosome or minichromosome is not correctly segregated to either daughter cells during mitosis.","definition_xrefs":["PMID:11809834","PMID:20211136","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0000337","FYPO:0005447"],"is_obsolete":false,"name":"chromosome loss during mitotic chromosome segregation","synonyms":[{"name":"chromosome loss during mitotic sister chromatid segregation","type":"exact"},{"name":"chromosome loss during segregation during vegetative growth","type":"exact"},{"name":"chromosome segregation defects, chromosome loss","type":"exact"}],"termid":"FYPO:0000227"}


id: PBO:0079580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 1","termid":"PBO:0079580"}


id: PBO:0090270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase (H3-K36 specific), Jmjc domain Epe1","termid":"PBO:0090270"}


id: GO:0044100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The complex infective apparatus corresponding to the central mass of cytoplasm within a spore that is injected into a host cell by various parasitic microorganisms.","definition_xrefs":["PMID:9723921","PMID:12076771","PMID:16004371","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sporoplasm","termid":"GO:0044100"}


id: GO:0016058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the excited state of a photoreceptor cell to produce a steady-state current as a result of signals generated by rhodopsin activation by a photon.","definition_xrefs":["GOC:dph","GOC:tb","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential in photoreceptor cell","termid":"GO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of membrane potential in photoreceptor cell by rhodopsin mediated signaling","synonyms":[{"name":"maintenance of rhodopsin mediated signaling","type":"related"},{"name":"maintenance of rhodopsin mediated signalling","type":"exact"}],"termid":"GO:0016058"}


id: GO:0046292
data:
  {"annotated_genes":["SJAG_01457","SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95291,77924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving formaldehyde (methanal, H2C=O), a colorless liquid or gas with a pungent odor, commonly used as a fixative or an antibacterial agent.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"formaldehyde metabolism","type":"exact"},{"name":"methanal metabolic process","type":"exact"},{"name":"methanal metabolism","type":"exact"}],"termid":"GO:0046292","terms_by_termid":{"GO:0046294":null}}


id: FYPO:0006807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein found at the cell surface contains a lower amount of galactose residues than normal. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PomBase:mah","PMID:9839953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased galactose level in glycoprotein glycan","termid":"FYPO:0003354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0003290","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased galactose level in cell surface glycoprotein glycan","synonyms":[{"name":"decreased cell surface protein glycan galactosylation","type":"related"},{"name":"decreased galactose level in cell surface glycoprotein oligosaccharide","type":"related"},{"name":"decreased galactose level in glycoprotein glycan at cell surface","type":"exact"},{"name":"decreased level of alpha 1,2-linked galactose residues in cell surface glycoprotein glycan","type":"exact"},{"name":"reduced galactose level in cell surface glycoprotein glycan","type":"exact"}],"termid":"FYPO:0006807"}


id: PBO:0065055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 9","termid":"PBO:0065055"}


id: MONDO:0015225
data:
  {"annotated_genes":["SJAG_03379","SJAG_00853","SJAG_03703","SJAG_00773","SJAG_00875","SJAG_04697","SJAG_03847","SJAG_01665","SJAG_01863","SJAG_05194","SJAG_01065","SJAG_02431","SJAG_02096","SJAG_03106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032903"},{"annotations":[86298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030281"},{"annotations":[85469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030847"},{"annotations":[86898,86899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032751"},{"annotations":[86305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[85591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014248"},{"annotations":[86905,86906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008338"},{"annotations":[86930,86931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020746"},{"annotations":[85900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"},{"annotations":[86944,86945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008675"},{"annotations":[86789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[85749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012750"},{"annotations":[85954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009670"},{"annotations":[85256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012656"},{"annotations":[85197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014552"},{"annotations":[85581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014806"},{"annotations":[85580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014807"},{"annotations":[85449,85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008016"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00853":null,"SJAG_00875":null,"SJAG_01065":null,"SJAG_01665":null,"SJAG_01863":null,"SJAG_02096":null,"SJAG_02431":null,"SJAG_03106":null,"SJAG_03379":null,"SJAG_03703":null,"SJAG_03847":null,"SJAG_04697":null,"SJAG_05194":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D001176","icd11.foundation:1692487835","Orphanet:109007","GARD:19870"],"synonyms":[{"name":"arthrogryposis syndrome","type":"exact"}],"termid":"MONDO:0015225","terms_by_termid":{"MONDO:0008016":null,"MONDO:0008338":null,"MONDO:0008675":null,"MONDO:0008822":null,"MONDO:0009670":null,"MONDO:0010532":null,"MONDO:0012656":null,"MONDO:0012750":null,"MONDO:0014248":null,"MONDO:0014552":null,"MONDO:0014806":null,"MONDO:0014807":null,"MONDO:0020746":null,"MONDO:0030281":null,"MONDO:0030847":null,"MONDO:0032751":null,"MONDO:0032903":null,"MONDO:0100104":null},"xrefs":{"Monarch":{"xref_id":"0015225"}}}


id: PBO:0029004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_S_phase_progression","termid":"PBO:0029004"}


id: PBO:0036207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_metaphase_chromosome_recapture","termid":"PBO:0036207"}


id: MONDO:0017587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a UBERON:0002283.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nail tumor","termid":"MONDO:0017588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"onychomatricoma","secondary_identifiers":["GARD:21234","UMLS:C4751078","MEDGEN:1667118","Orphanet:300512"],"synonyms":[{"name":"nail matrix neoplasm","type":"exact"},{"name":"nail matrix tumor","type":"exact"},{"name":"nail matrix tumour","type":"exact"},{"name":"neoplasm of nail matrix","type":"exact"},{"name":"tumor of nail matrix","type":"exact"},{"name":"tumour of nail matrix","type":"exact"}],"termid":"MONDO:0017587","xrefs":{"Monarch":{"xref_id":"0017587"}}}


id: MONDO:0012513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the KLF11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005015","MONDO:0005066","MONDO:0037792","MONDO:0019254"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 7","secondary_identifiers":["GARD:10661","MESH:C566466","DOID:0111106","SCTID:609574004","OMIM:610508","UMLS:C1864839","MEDGEN:351232"],"synonyms":[{"name":"KLF11 maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"MODY KLF11 related","type":"related"},{"name":"MODY type 7","type":"related"},{"name":"MODY7","type":"exact"},{"name":"diabetes mellitus MODY type 7","type":"related"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in KLF11","type":"exact"},{"name":"maturity-onset diabetes of the young, type 7","type":"related"},{"name":"maturity-onset diabetes of the young, type VII","type":"exact"},{"name":"type 7 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0012513","xrefs":{"Monarch":{"xref_id":"0012513"}}}


id: FYPO:0007445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which autophagic degradation of the endoplasmic reticulum is abnormal.","definition_xrefs":["GO:0061709","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal reticulophagy","termid":"FYPO:0008083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal reticulophagy during vegetative growth","synonyms":[{"name":"abnormal ER autophagy during vegetative growth","type":"exact"},{"name":"abnormal ER degradation during vegetative growth","type":"related"},{"name":"abnormal ER-phagy during vegetative growth","type":"exact"},{"name":"abnormal endoplasmic reticulum autophagy during vegetative growth","type":"exact"},{"name":"abnormal reticulophagy during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007445"}


id: GO:0017118
data:
  {"annotated_genes":["SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78011],"is_not":false,"summary":null,"term":"GO:0017118"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lipoyl-5'-AMP + L-lysyl-[lipoyl-carrier protein] = (R)-N6-lipoyl-L-lysyl-[lipoyl-carrier protein] + AMP + 2 H+.","definition_xrefs":["RHEA:20473","PMID:10103005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"lipoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0017118","terms_by_termid":{"GO:0017118":null}}


id: GO:1990559
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70279],"is_not":false,"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The process in which coenzyme A is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:11158296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A transmembrane transport","termid":"GO:0035349"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrial coenzyme A transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990559","terms_by_termid":{"GO:1990559":null}}


id: PBO:0059835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission regulator 1","termid":"PBO:0059835"}


id: PBO:0072053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 23","termid":"PBO:0072053"}


id: GO:0003356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency of cilium movement, the directed, self-propelled movement of a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium movement","termid":"GO:0003352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cilium beat frequency","secondary_identifiers":["GO:0036144"],"synonyms":[{"name":"regulation of flagellum beat frequency","type":"related"},{"name":"regulation of microtubule-based flagellum beat frequency","type":"exact"}],"termid":"GO:0003356"}


id: PBO:0091628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid dehydrogenase, implicated in cellular detoxification","termid":"PBO:0091628"}


id: GO:0102848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-18:2-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-18:2-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-18:2-digalactosyldiacylglycerol desaturase activity (obsolete GO:0102848)","termid":"GO:0102848"}


id: GO:0007337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete unilateral process (obsolete GO:0007337)","synonyms":[{"name":"unilateral process","type":"exact"}],"termid":"GO:0007337"}


id: MONDO:0016211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urothelial carcinoma","termid":"MONDO:0040679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-papillary transitional cell carcinoma of the bladder","secondary_identifiers":["icd11.foundation:1541108245","UMLS:C5679798","Orphanet:209989","GARD:20447","MEDGEN:1842547"],"synonyms":[{"name":"non-papillary urothelial carcinoma","type":"exact"}],"termid":"MONDO:0016211","xrefs":{"Monarch":{"xref_id":"0016211"}}}


id: GO:0090504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of one cell sheet over other cells or yolk.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epiboly","termid":"GO:0090504"}


id: GO:0015127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bilirubin from one side of a membrane to the other. Bilirubin is a linear tetrapyrrole produced in the reticuloendothelial system from biliverdin and transported to the liver as a complex with serum albumin. In the liver, bilirubin is converted to bilirubin bisglucuronide, which is excreted in the bile.","definition_xrefs":["GOC:ai","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"bilirubin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5679031","Reactome:R-HSA-5679041","Reactome:R-HSA-9661417"],"termid":"GO:0015127"}


id: GO:1902706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to acetate.","definition_xrefs":["GOC:mengo_curators","GO_REF:0000093","PMID:19539744","PMID:18727018","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to acetate (obsolete GO:1902706)","synonyms":[{"name":"acidogenesis","type":"broad"},{"name":"hexose breakdown to acetate","type":"exact"},{"name":"hexose catabolism to acetate","type":"exact"},{"name":"hexose degradation to acetate","type":"exact"}],"termid":"GO:1902706"}


id: GO:0044735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant negative regulation in the activity of an acid-sensing ion channel (ASIC) in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:23034652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of acid-sensing ion channel activity in another organism","termid":"GO:0044733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of acid-sensing ion channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of ASIC channel activity in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of acid-sensing ion channel activity in other organism","type":"exact"}],"termid":"GO:0044735"}


id: PBO:0018010
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the ribosomal bL21 domain does not exist on its own","termid":"PBO:0018010"}


id: MONDO:0014566
data:
  {"annotated_genes":["SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85210],"is_not":false,"summary":null,"term":"MONDO:0014566"}]},"cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2U (CMT2U) is a subtype of autosonal dominant Charcot-Marie-Tooth disease type 2 characterized by late adult-onset (50-60 years of age) of slowly progressive, axonal, peripheral sensorimotor neuropathy resulting in distal upper limb and proximal and distal lower limb muscle weakness and atrophy, in conjunction with distal, panmodal sensory impairment in upper and lower limbs. Tendon reflexes are reduced and nerve conduction velocities range from reduced to absent. Neuropathic pain has also been associated.","definition_xrefs":["Orphanet:397735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2U","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110173","GARD:17638","OMIM:616280","MEDGEN:906504","SCTID:765046002","UMLS:C4084821"],"synonyms":[{"name":"CMT2U","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in MARS","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2U","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2U","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 2U","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2U","type":"related"},{"name":"MARS Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2 due to MARS mutation","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2U","type":"exact"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2U","type":"exact"}],"termid":"MONDO:0014566","terms_by_termid":{"MONDO:0014566":null},"xrefs":{"Monarch":{"xref_id":"0014566"}}}


id: PBO:0077730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18 pseudogene 2","termid":"PBO:0077730"}


id: GO:0098577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sex chromosome that has been inactivated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"inactive sex chromosome","synonyms":[{"name":"inactivated sex chromosome","type":"exact"}],"termid":"GO:0098577"}


id: PBO:0074652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 40C","termid":"PBO:0074652"}


id: FYPO:0005855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes a single round of cell division to produce daughter cells that have two or more septa apiece, which then die.","definition_xrefs":["PMID:12764130","PomBase:vw","PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0000004","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, multiseptate cell","synonyms":[{"name":"inviable following spore germination, single cell division, multiseptate cell","type":"exact"},{"name":"inviable germinated spore, single cell division, multiseptate cell","type":"exact"},{"name":"lethal after spore germination, single cell division, multiseptate cell","type":"exact"}],"termid":"FYPO:0005855"}


id: PBO:0080206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VGF nerve growth factor inducible","termid":"PBO:0080206"}


id: GO:0052890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a flavin.","definition_xrefs":["EC:1.3.8.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor","termid":"GO:0052890"}


id: PBO:0027671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_mitotic_cell_cycle_spindle_assembly_checkpoint_signaling","termid":"PBO:0027671"}


id: PBO:0003099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier Hub1","termid":"PBO:0003099"}


id: PBO:0108672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK/PAR-1 kinase Kin1","termid":"PBO:0108672"}


id: PBO:0067757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 56","termid":"PBO:0067757"}


id: FYPO:0005316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PMID:22771823","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation during vegetative growth","termid":"FYPO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at subtelomere during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"increased histone H4K12 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased subtelomeric histone H4K12 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005316"}


id: PBO:0027844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027844"}


id: MONDO:0004820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, usually encapsulated slow growing tumor of the peripheral nervous system composed of Schwann cells. It recurs infrequently and only rare cases associated with malignant transformation have been reported.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral nerve schwannoma","secondary_identifiers":["DOID:956","NCIT:C41430","MEDGEN:274155","UMLS:C1519001"],"synonyms":[{"name":"peripheral nerve schwannoma","type":"exact"}],"termid":"MONDO:0004820","xrefs":{"Monarch":{"xref_id":"0004820"}}}


id: GO:0019017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome that is divided into two or more physically separate molecules of nucleic acid and packaged into a single virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete segmented viral genome (obsolete GO:0019017)","termid":"GO:0019017"}


id: PBO:0075510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2 pseudogene 1","termid":"PBO:0075510"}


id: PBO:0048280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 15","termid":"PBO:0048280"}


id: PBO:0077595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 6","termid":"PBO:0077595"}


id: GO:0039616
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=2 symmetry. The T=2 capsid is composed of 12 pentameric dimers.","definition_xrefs":["VZ:838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=2 icosahedral viral capsid","termid":"GO:0039616"}


id: PR:O42940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.04 gene.","definition_xrefs":["UniProtKB:O42940","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transport protein pho88 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.04","synonyms":[{"name":"Spom972h-SPBC16H5.04","type":"exact"},{"name":"phosphate metabolism protein pho88 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42940"}


id: PBO:0086004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YOR062C has a paralog, YKR075C, that arose from the whole genome duplication","termid":"PBO:0086004"}


id: PBO:0042331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD55 molecule (Cromer blood group)","termid":"PBO:0042331"}


id: PBO:0000720
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Pap1","termid":"PBO:0000720"}


id: SO:0002039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A shRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"shRNA_primary_transcript","termid":"SO:0002038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_shRNA_primary_transcript","synonyms":[{"name":"miR encoding shRNA primary transcript","type":"exact"}],"termid":"SO:0002039"}


id: FYPO:0002548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 4'-phosphopantothenate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 4'-phosphopantothenate level","synonyms":[{"name":"increased 4'-phosphopantothenate accumulation","type":"related"},{"name":"increased cellular 4'-phosphopantothenate level during mitotic cell cycle","type":"related"},{"name":"increased cellular 4'-phosphopantothenate level during vegetative growth","type":"exact"}],"termid":"FYPO:0002548"}


id: GO:0160147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(38/39/40) in tRNA = pseudouridine(38/39/40) in tRNA.","definition_xrefs":["EC:5.4.99.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0140098","GO:0140101","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tRNA pseudouridine(38-40) synthase activity","secondary_identifiers":["MetaCyc:TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN","RHEA:22376"],"synonyms":[{"name":"PSUI activity","type":"exact"},{"name":"tRNA pseudouridylate synthase","type":"exact"}],"termid":"GO:0160147"}


id: PBO:0044199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin H","termid":"PBO:0044199"}


id: PBO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyltransferase (predicted)","termid":"PBO:0001400"}


id: PBO:0089176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi tether Uso1","termid":"PBO:0089176"}


id: GO:2001220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of G2 phase of mitotic cell cycle.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G2 phase of mitotic cell cycle (obsolete GO:2001220)","synonyms":[{"name":"negative regulation of G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:2001220"}


id: GO:0048145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of multiplication or reproduction of fibroblast cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast proliferation","termid":"GO:0048145"}


id: PBO:0046473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELKS/RAB6-interacting/CAST family member 1","termid":"PBO:0046473"}


id: MONDO:0019339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"47, XYY syndrome is a sex chromosome aneuploidy where males receive an additional Y chromosome, and is characterized clinically by tall stature evident from childhood, macrocephaly, facial features (mild hypertelorism, low set ears, a mildly flat malar region), speech delay and an increased risk for social and emotional difficulties, attention deficit hyperactive disorder and autistic spectrum disorder.","definition_xrefs":["Orphanet:8"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"47,XYY syndrome","secondary_identifiers":["UMLS:C3266843","MEDGEN:473794","NCIT:C85237","MedDRA:10056894","GARD:5674","SCTID:50749006","NORD:1871","MESH:C535317"],"synonyms":[{"name":"47, XYY syndrome","type":"related"},{"name":"47,XYY","type":"exact"},{"name":"47,XYY syndrome","type":"exact"},{"name":"Double Y","type":"exact"},{"name":"Double Y syndrome","type":"exact"},{"name":"XYY Syndrome","type":"exact"},{"name":"XYY karyotype","type":"exact"},{"name":"XYY syndrome","type":"exact"},{"name":"Y disomy","type":"exact"},{"name":"YY syndrome","type":"related"},{"name":"disomy Y","type":"exact"}],"termid":"MONDO:0019339","xrefs":{"Monarch":{"xref_id":"0019339"}}}


id: GO:0047693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = AMP + H+ + diphosphate.","definition_xrefs":["RHEA:14245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0047429","GO:0003674"],"is_obsolete":false,"name":"ATP diphosphatase activity","secondary_identifiers":["EC:3.6.1.8","MetaCyc:ATP-PYROPHOSPHATASE-RXN"],"synonyms":[{"name":"ATP diphosphohydrolase","type":"broad"},{"name":"ATP diphosphohydrolase (diphosphate-forming)","type":"exact"},{"name":"ATP pyrophosphatase activity","type":"exact"},{"name":"adenosine triphosphate pyrophosphatase activity","type":"exact"}],"termid":"GO:0047693"}


id: GO:0071279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cobalt ion","termid":"GO:0032025"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cobalt ion","termid":"GO:0071279"}


id: PBO:0075555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPEM family member 3","termid":"PBO:0075555"}


id: MONDO:0003855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immature teratoma of ovary (obsolete MONDO:0003855)","termid":"MONDO:0003855","xrefs":{"Monarch":{"xref_id":"0003855"}}}


id: MOD:00942
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes four (1)H protium atoms with four (2)H deuterium atoms to produce (4,4,5,5-(2)H4)-L-lysine.","definition_xrefs":["OMSSA:180","Unimod:481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium tetrasubstituted residue","termid":"MOD:00837"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(4,4,5,5-(2)H4)-L-lysine","synonyms":[{"name":"4,4,5,5-D4 Lysine","type":"related"},{"name":"4,4,5,5-tetradeuterolysine","type":"exact"},{"name":"Label:2H(4)","type":"related"},{"name":"lys-2H4","type":"exact"}],"termid":"MOD:00942"}


id: PBO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8S rRNA (predicted)","termid":"PBO:0001034"}


id: PBO:0044722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 9 (pseudogene)","termid":"PBO:0044722"}


id: PBO:0034370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_upstream_of_sequence_of","termid":"PBO:0034370"}


id: MONDO:0022196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic erosive gastritis","secondary_identifiers":["MEDGEN:78626","SCTID:63137003","UMLS:C0267145","ICD9:535.40"],"synonyms":[{"name":"ceg - chronic erosive gastritis","type":"related"},{"name":"chronic erosive gastritis","type":"exact"},{"name":"diffuse varioliform gastritis","type":"related"},{"name":"idiopathic chronic, erosive gastritis","type":"related"},{"name":"varioliform gastritis","type":"related"}],"termid":"MONDO:0022196","xrefs":{"Monarch":{"xref_id":"0022196"}}}


id: MONDO:0010882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aphalangy-syndactyly-microcephaly is an extremely rare malformation syndrome characterized by the association of partial distal aphalangia with syndactyly, duplication of metatarsal IV, microcephaly, and mild intellectual disability.","definition_xrefs":["Orphanet:1113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"aphalangy-syndactyly-microcephaly syndrome","secondary_identifiers":["MESH:C563942","MEDGEN:324958","OMIM:600384","GARD:748","UMLS:C1838161"],"synonyms":[{"name":"APHALANGIA, partial, with syndactyly and DUPLICATION of metatarsal IV","type":"related"},{"name":"Aphalangia partial with syndactyly and duplication of metatarsal IV","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal 4","type":"related"},{"name":"Aphalangia, partial, with syndactyly and Duplication of metatarsal type 4","type":"exact"}],"termid":"MONDO:0010882","xrefs":{"Monarch":{"xref_id":"0010882"}}}


id: FYPO:0004880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more lipid metabolism RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Lipid metabolism RNAs are transcribed from genes whose products are involved in any lipid metabolic process.","definition_xrefs":["PMID:26366556","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of lipid metabolism gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of lipid metabolism gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of lipid metabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of lipid metabolism gene transcripts during vegetative growth","type":"exact"},{"name":"decreased lipid metabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of lipid metabolism gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004880"}


id: PBO:0002746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN family protein Yip11","termid":"PBO:0002746"}


id: GO:0034283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-alpha-copalyl diphosphate = stemod-13(17)-ene + diphosphate.","definition_xrefs":["RHEA:25556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"syn-stemod-13(17)-ene synthase activity","secondary_identifiers":["KEGG_REACTION:R09116","EC:4.2.3.34","MetaCyc:RXN-9291"],"synonyms":[{"name":"9alpha-copalyl-diphosphate diphosphate-lyase [stemod-13(17)-ene-forming] activity","type":"exact"},{"name":"exo-stemodene synthase activity","type":"exact"},{"name":"stemod-13(17)-ene synthase activity","type":"exact"},{"name":"stemodene synthase activity","type":"exact"},{"name":"syn-stemodene synthase activity","type":"exact"}],"termid":"GO:0034283"}


id: MONDO:0019571
data:
  {"annotated_genes":["SJAG_03457","SJAG_00660"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85770,85769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"}]},"cv_name":"mondo","definition":"Autosomal dominant cutis laxa (ADCL) is a connective tissue disorder characterized by wrinkled, redundant and sagging inelastic skin associated in some cases with internal organ involvement.","definition_xrefs":["Orphanet:90348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"autosomal dominant cutis laxa","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:120630","SCTID:111388003","GARD:1639","icd11.foundation:720393698","DOID:0070142","MESH:C562627","UMLS:C0268350"],"synonyms":[{"name":"ADCL","type":"exact"},{"name":"cutis laxa, autosomal dominant","type":"exact"}],"termid":"MONDO:0019571","terms_by_termid":{"MONDO:0014706":null},"xrefs":{"Monarch":{"xref_id":"0019571"}}}


id: PBO:0043699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 5","termid":"PBO:0043699"}


id: PBO:0013802
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MET17","termid":"PBO:0013802"}


id: PBO:0046457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS15 antisense RNA 1","termid":"PBO:0046457"}


id: PBO:0072294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 12","termid":"PBO:0072294"}


id: PBO:0071234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 75","termid":"PBO:0071234"}


id: MONDO:0020490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 9 is a chromosomal abnormality that can affect may parts of the body. In people affected by this condition, some of the body's cells have three copies of chromosome 9 (trisomy), while other cells have the usual two copies of this chromosome. The signs and symptoms vary but may include mild to severe intellectual disability, developmental delay, growth problems (both before and after birth), congenital heart defects, and/or abnormalities of the craniofacial (skull and face) region. Most cases are not inherited; it often occurs sporadically as a random event during the formation of the reproductive cells (egg and sperm) or as the fertilized egg divides. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 9 disorder","termid":"MONDO:0700016"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 9","secondary_identifiers":["NORD:966","Orphanet:99776","GARD:43","MEDGEN:419661","SCTID:764989007","UMLS:C2930908","MESH:C535454"],"synonyms":[{"name":"Mosaic trisomy chromosome 9","type":"related"},{"name":"Mosaic trisomy type 9","type":"exact"},{"name":"trisomy 9 mosaicism","type":"related"}],"termid":"MONDO:0020490","xrefs":{"Monarch":{"xref_id":"0020490"}}}


id: SO:0001416
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A flanking region located five prime of a specific region.","definition_xrefs":["SO:chado"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanking_region","termid":"SO:0000239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_flanking_region","synonyms":[{"name":"5' flanking region","type":"related"},{"name":"five prime flanking region","type":"exact"}],"termid":"SO:0001416"}


id: MOD:01555
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01555"}


id: PBO:0087455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a Golgi mannosyltransferase complex; complex mediates elongation of the polysaccharide mannan backbone; membrane protein of the mannosyltransferase family; other members of the complex are Anp1p, Mnn9p, Mnn11p, and Hoc1p","termid":"PBO:0087455"}


id: PBO:0052839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-4","termid":"PBO:0052839"}


id: PBO:0045707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysferlin","termid":"PBO:0045707"}


id: MONDO:0022330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"4-hydroxyphenylacetic aciduria","secondary_identifiers":["GARD:8155","MEDGEN:376417","MESH:C535315","UMLS:C1848680"],"termid":"MONDO:0022330","xrefs":{"Monarch":{"xref_id":"0022330"}}}


id: GO:0102533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: genkwanin + S-adenosyl-L-methionine = apigenin 4',7-dimethyl ether + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"genkwanin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14750"],"termid":"GO:0102533"}


id: FYPO:0006161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to chromatin during meiosis I","synonyms":[{"name":"abolished protein localisation to chromatin during meiosis I","type":"exact"},{"name":"abolished protein localization to chromatin during first meiotic nuclear division","type":"exact"},{"name":"protein localization to chromatin during meiosis I replication abolished","type":"exact"}],"termid":"FYPO:0006161"}


id: PBO:0074088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC26A4 antisense RNA 1","termid":"PBO:0074088"}


id: PBO:0060212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multivesicular body subunit 12B","termid":"PBO:0060212"}


id: PBO:0043690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I2","termid":"PBO:0043690"}


id: GO:0052886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,9'-di-cis-zeta-carotene + a quinone = 7,9,9'-tri-cis-neurosporene + a quinol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,9'-dicis-carotene:quinone oxidoreductase activity (obsolete GO:0052886)","termid":"GO:0052886"}


id: PBO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYRK family protein kinase Pom1","termid":"PBO:0000434"}


id: FYPO:0004725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nuclear envelope has one or more extensions that protrude into the cytoplasm during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"nuclear envelope protrusion present during mitotic interphase","synonyms":[{"name":"nuclear envelope deformation during mitotic interphase","type":"related"},{"name":"nuclear envelope protrusion present during interphase","type":"exact"},{"name":"nuclear envelope protrusion present during interphase during mitotic cell cycle","type":"related"},{"name":"nuclear envelope protrusion present during interphase during vegetative growth","type":"exact"},{"name":"protruding nuclear envelope during mitotic interphase","type":"exact"}],"termid":"FYPO:0004725"}


id: PBO:0045012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIP2A intronic transcript 1","termid":"PBO:0045012"}


id: GO:0001925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of B-1 B cell differentiation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B-1 B cell differentiation","termid":"GO:0001924"},{"relation_name":"is_a","term_name":"negative regulation of B cell differentiation","termid":"GO:0045578"},{"relation_name":"negatively_regulates","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B-1 B cell differentiation","synonyms":[{"name":"down regulation of B-1 B cell differentiation","type":"exact"},{"name":"down-regulation of B-1 B cell differentiation","type":"exact"},{"name":"downregulation of B-1 B cell differentiation","type":"exact"},{"name":"inhibition of B-1 B cell differentiation","type":"narrow"},{"name":"negative regulation of B-1 B cell development","type":"related"},{"name":"negative regulation of B-1 B lymphocyte differentiation","type":"exact"},{"name":"negative regulation of B-1 B-cell differentiation","type":"exact"},{"name":"negative regulation of B-1 B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0001925"}


id: PBO:0116621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 1","termid":"PBO:0116621"}


id: GO:0018565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxydibenzothiophene + O2 = cis-4-(2-(3-hydroxy)-thionaphthenyl)-2-oxo-3-butenoate.","definition_xrefs":["UM-BBD_reactionID:r0162"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroxydibenzothiophene dioxygenase activity (obsolete GO:0018565)","termid":"GO:0018565"}


id: PBO:0057673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1264","termid":"PBO:0057673"}


id: PBO:0117141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEPSIN antisense RNA 1","termid":"PBO:0117141"}


id: SO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon with the DNA sequence TGA.","direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon","termid":"SO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opal_stop_codon","synonyms":[{"name":"Opal stop codon","type":"exact"}],"termid":"SO:0002335"}


id: PBO:0059696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 4","termid":"PBO:0059696"}


id: PBO:0113338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; proposed role as basic amino acid permease based on phylogeny; targeted to vacuole via AP-3 pathway; physical interaction with Atg27p suggests possible role in autophagy; non-essential gene","termid":"PBO:0113338"}


id: PBO:0081930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger NFX1-type containing 1","termid":"PBO:0081930"}


id: GO:0035144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anal fin are generated and organized. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"anal fin development","termid":"GO:0033335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anal fin morphogenesis","termid":"GO:0035144"}


id: GO:0070722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that consists of a heterodimer of the proteins Tle3 (also known as Grg3b) and Aes (Grg5), which are homologs of the Drosophila groucho gene product.","definition_xrefs":["GOC:mah","PMID:8955148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Tle3-Aes complex","synonyms":[{"name":"Grg3b-Grg5 complex","type":"exact"}],"termid":"GO:0070722"}


id: MONDO:0100480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diminished production of adrenocortical hormones due to autoimmune destruction of the adrenal glands.","definition_xrefs":["NCIT:C113814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune primary adrenal insufficiency","secondary_identifiers":["GARD:5740","icd11.foundation:1920929898","Orphanet:85138","UMLS:C0271737","MEDGEN:543526"],"synonyms":[{"name":"autoimmune Addison's disease","type":"exact"},{"name":"autoimmune adrenalitis","type":"related"}],"termid":"MONDO:0100480","xrefs":{"Monarch":{"xref_id":"0100480"}}}


id: GO:0046794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, into, out of, or within a host cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transport of virus","synonyms":[{"name":"viral transport","type":"exact"},{"name":"virion transport","type":"narrow"}],"termid":"GO:0046794"}


id: PBO:0087326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorbitol dehydrogenase; protein sequence is 99% identical to the Sor1p sorbitol dehydrogenase","termid":"PBO:0087326"}


id: PBO:0067340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 434, pseudogene","termid":"PBO:0067340"}


id: GO:0060556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate frequency or extent of a vitamin D biosynthetic process. Vitamin D biosynthesis is the chemical reactions and pathways resulting in the formation of vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["CHEBI:27300","GOC:BHF","GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"regulates","term_name":"vitamin D biosynthetic process","termid":"GO:0042368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of vitamin D biosynthetic process","termid":"GO:0060556"}


id: GO:0010779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA repair synthesis","termid":"GO:0000711"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0007049","GO:0006281","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"meiotic DNA repair synthesis involved in meiotic gene conversion","termid":"GO:0010779"}


id: GO:0001094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIID complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["GOC:krc","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TFIID-class transcription factor complex binding","synonyms":[{"name":"TFIID-class transcription factor binding","type":"exact"}],"termid":"GO:0001094"}


id: GO:1902933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isopentenol.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:17693564","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isopentenol metabolic process","synonyms":[{"name":"isopentenol metabolism","type":"exact"}],"termid":"GO:1902933"}


id: MONDO:0019328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphangioma characterized by the presence of thin-walled cavernous lymphatic spaces.","definition_xrefs":["NCIT:C53316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"macrocystic lymphatic malformation","secondary_identifiers":["GARD:6010","icd11.foundation:1525487462","Orphanet:79489","MEDGEN:104729","UMLS:C0205828","NANDO:1200881"],"synonyms":[{"name":"cavernous lymphangioma","type":"exact"},{"name":"cavernous lymphatic malformation","type":"exact"},{"name":"macrocystic lymphangioma","type":"exact"}],"termid":"MONDO:0019328","xrefs":{"Monarch":{"xref_id":"0019328"}}}


id: PBO:0063412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 1A","termid":"PBO:0063412"}


id: GO:0030650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antibiotic metabolic process","synonyms":[{"name":"peptide antibiotic metabolism","type":"exact"}],"termid":"GO:0030650"}


id: MONDO:0019036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Free-living amebae belonging to the genera Acanthamoeba, Balamuthia, Naegleria and Sappinia are important causes of disease in humans and animals. Naegleria fowleri produces an acute, and usually lethal, central nervous system (CNS) disease called primary amebic meningoencephalitis (PAM). Acanthamoeba spp. and Balamuthia mandrillaris are opportunistic free-living amebae capable of causing granulomatous amebic encephalitis (GAE) in individuals with compromised immune systems. Sappinia pedata has been implicated in a case of amebic encephalitis. Naegleria fowleri and Acanthamoeba spp., are commonly found in lakes, swimming pools, tap water, and heating and air conditioning units.","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amoebiasis due to free-living amoebae","secondary_identifiers":["MEDGEN:509253","UMLS:C0153326","GARD:12650","Orphanet:68"],"termid":"MONDO:0019036","xrefs":{"Monarch":{"xref_id":"0019036"}}}


id: MONDO:1011138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in alpaca.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, alpaca","secondary_identifiers":["OMIA:001764-30538"],"termid":"MONDO:1011138","xrefs":{"Monarch":{"xref_id":"1011138"}}}


id: MONDO:0017311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with thoracic aortic aneurysm and aortic dissection (obsolete MONDO:0017311)","secondary_identifiers":["Orphanet:285014"],"termid":"MONDO:0017311","xrefs":{"Monarch":{"xref_id":"0017311"}}}


id: PBO:0074925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 93","termid":"PBO:0074925"}


id: GO:2001296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N(omega)-methyl-L-arginine.","definition_xrefs":["GOC:rs","PMID:10510241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"N(omega)-methyl-L-arginine metabolic process","synonyms":[{"name":"N(omega)-methyl-L-arginine metabolism","type":"exact"}],"termid":"GO:2001296"}


id: PBO:0059301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L49","termid":"PBO:0059301"}


id: PBO:0071352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 11","termid":"PBO:0071352"}


id: MONDO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the epithelial cells. Microscopically, the neoplastic epithelial cells form cylindrical spatial configurations (cribriform or classic type of adenoid cystic carcinoma), cordlike structures (tubular type of adenoid cystic carcinoma), or solid structures (basaloid variant of adenoid cystic carcinoma). Adenoid cystic carcinomas mostly occur in the salivary glands. Other primary sites of involvement include the lacrimal gland, the larynx, and the lungs. Adenoid cystic carcinomas spread along nerve sheaths, resulting in severe pain, and they tend to recur. Lymph node metastases are unusual; hematogenous tumor spread is characteristic.","definition_xrefs":["NCIT:C2970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenoid cystic carcinoma","secondary_identifiers":["MESH:D003528","icd11.foundation:2127202862","ONCOTREE:ACYC","UMLS:C0010606","EFO:0000231","ICDO:8200/3","MEDGEN:41382","GARD:5743","DOID:0080202"],"synonyms":[{"name":"adenocystic carcinoma","type":"exact"},{"name":"adenoid cystic cancer","type":"exact"},{"name":"adenoid cystic carcinoma","type":"exact"},{"name":"cribriform carcinoma","type":"related"},{"name":"cylindroid adenocarcinoma","type":"exact"},{"name":"cylindroma","type":"related"}],"termid":"MONDO:0004971","xrefs":{"Monarch":{"xref_id":"0004971"}}}


id: GO:0140707
data:
  {"annotated_genes":["SJAG_03449","SJAG_01745","SJAG_03103"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103356,91116,119289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062239"}]},"cv_name":"molecular_function","definition":"Binding to chromatin and the nuclear inner membrane, in order to establish and maintain the heterochromatin location and organization, or to enable equal segregation of the nuclear membrane during mitosis.","definition_xrefs":["PMID:24184107","PMID:31048766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03103":null,"SJAG_03449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"chromatin-nuclear membrane anchor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"termid":"GO:0140707","terms_by_termid":{"GO:0062239":null}}


id: GO:0045708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination in a larval organism.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salivary gland boundary specification","termid":"GO:0045704"},{"relation_name":"regulates","term_name":"larval salivary gland boundary specification","termid":"GO:0007433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of larval salivary gland boundary specification","synonyms":[{"name":"regulation of larval salivary gland determination","type":"exact"}],"termid":"GO:0045708"}


id: PBO:0110375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 1","termid":"PBO:0110375"}


id: PBO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2539","termid":"PBO:0055120"}


id: GO:0019908
data:
  {"annotated_genes":["SJAG_02057","SJAG_01149","SJAG_00150","SJAG_04614","SJAG_03618","SJAG_00512","SJAG_04420","SJAG_03061","SJAG_04368","SJAG_03206","SJAG_01213","SJAG_00901","SJAG_03967","SJAG_00758","SJAG_00995","SJAG_01207"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95557,110661,79138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[108628,108784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[114572,76042,74131,78401,69815,70108,91936,108733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[76125,60760,111828],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"Cyclin-dependent protein kinase (CDK) complex found in the nucleus.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01149":null,"SJAG_01207":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_03061":null,"SJAG_03206":null,"SJAG_03618":null,"SJAG_03967":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear cyclin-dependent protein kinase holoenzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CDK holoenzyme","type":"broad"}],"termid":"GO:0019908","terms_by_termid":{"GO:0005675":null,"GO:0070691":null,"GO:0070692":null,"GO:0070985":null}}


id: GO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An RNA polymerase complex containing polypeptides encoded by the plastid genome. Plastid-encoded DNA-directed RNA polymerases resemble eubacterial multisubunit RNA polymerases, with a core composed of alpha, beta, and beta-prime subunits. Some forms contain multiple additional subunits. An additional sigma factor subunit is required for promoter recognition.","definition_xrefs":["GOC:krc","GOC:mah","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase complex","termid":"GO:0000428"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid-encoded plastid RNA polymerase complex","termid":"GO:0000427"}


id: GO:0050988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The carboxylation of the N-terminal methionine of proteins to form the derivative N-carboxy-L-methionine.","definition_xrefs":["RESID:AA0363"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-methionine carboxylation (obsolete GO:0050988)","termid":"GO:0050988"}


id: GO:1900783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumiquinazoline F.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F catabolic process (obsolete GO:1900783)","synonyms":[{"name":"fumiquinazoline F breakdown","type":"exact"},{"name":"fumiquinazoline F catabolism","type":"exact"},{"name":"fumiquinazoline F degradation","type":"exact"}],"termid":"GO:1900783"}


id: GO:0031623
data:
  {"annotated_genes":["SJAG_03250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72820],"is_not":false,"summary":null,"term":"GO:0031623"}]},"cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the movement of receptors from the plasma membrane to the inside of the cell. The process begins when cell surface receptors are monoubiquitinated following ligand-induced activation. Receptors are subsequently taken up into endocytic vesicles from where they are either targeted to the lysosome or vacuole for degradation or recycled back to the plasma membrane.","definition_xrefs":["GOC:mah","GOC:signaling","PMID:15006537","GOC:bf","PMID:19643732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03250":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"receptor internalization","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031623","terms_by_termid":{"GO:0031623":null}}


id: PBO:0003772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-binding protein 4 (predicted)","termid":"PBO:0003772"}


id: PBO:0028163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP_binding","termid":"PBO:0028163"}


id: GO:0047889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + H2O + 2 oxidized ferredoxin = nitrate + 2 reduced ferredoxin.","definition_xrefs":["RHEA:21828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase activity","termid":"GO:0008940"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor","termid":"GO:0016664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ferredoxin-nitrate reductase activity","secondary_identifiers":["MetaCyc:1.7.7.2-RXN","EC:1.7.7.2"],"synonyms":[{"name":"assimilatory ferredoxin-nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"broad"},{"name":"nitrate (ferredoxin) reductase activity","type":"related"},{"name":"nitrite:ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0047889"}


id: PBO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR70 family","termid":"PBO:0001111"}


id: FYPO:0006477
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118963,119013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[119125,119126,119124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the metaphase/anaphase transition of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic metaphase/anaphase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01330","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["mad2delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle passage through mitotic metaphase-anaphase transition","type":"exact"},{"name":"abnormal cell cycle progression through the metaphase/anaphase transition","type":"exact"},{"name":"abnormal metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle metaphase/anaphase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase cell cycle phase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"abnormal onset of mitotic anaphase","type":"related"}],"termid":"FYPO:0006477","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: GO:0021548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pons over time, from its formation to the mature structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GOC:dph","ISBN:0838580343","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"metencephalon development","termid":"GO:0022037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons development","termid":"GO:0021548"}


id: PBO:0047558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 3","termid":"PBO:0047558"}


id: GO:0009527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the plastid envelope.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle outer membrane","termid":"GO:0031968"},{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid outer membrane","termid":"GO:0009527"}


id: MONDO:0006453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An aggressive, small cell, poorly differentiated thymic neuroendocrine carcinoma, characterized by the presence of a high mitotic rate and numerous apoptotic bodies.","definition_xrefs":["NCIT:C6460"],"gene_count":0,"genotype_count":0,"name":"obsolete thymic small cell carcinoma (obsolete MONDO:0006453)","termid":"MONDO:0006453","xrefs":{"Monarch":{"xref_id":"0006453"}}}


id: PBO:0085896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localizes to the cytoplasm and nucleus; overexpression affects protein trafficking through the endocytic pathway","termid":"PBO:0085896"}


id: PBO:0048579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 3 pseudogene","termid":"PBO:0048579"}


id: PATO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An achromatic color of maximum brightness; the color of objects that reflect nearly all light of all visible wavelengths.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"white","synonyms":[{"name":"whitish","type":"related"}],"termid":"PATO:0000323"}


id: FYPO:0004941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein contains a lower amount of mannose residues than normal. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio.","definition_xrefs":["PMID:11015724","PMID:8782411","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0003290"],"is_obsolete":false,"name":"decreased mannose level in glycoprotein glycan","synonyms":[{"name":"decreased mannose level in glycoprotein oligosaccharide","type":"related"},{"name":"reduced mannose level in glycoprotein glycan","type":"exact"}],"termid":"FYPO:0004941"}


id: PBO:0005433
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as Med9","termid":"PBO:0005433"}


id: PBO:0059761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 35","termid":"PBO:0059761"}


id: PBO:0069528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 797, pseudogene","termid":"PBO:0069528"}


id: MONDO:0016761
data:
  {"annotated_genes":["SJAG_00984","SJAG_04096","SJAG_01942","SJAG_00690","SJAG_03467","SJAG_04285","SJAG_00222","SJAG_03952","SJAG_04582","SJAG_01615"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054561"},{"annotations":[85296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030019"},{"annotations":[86633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014455"},{"annotations":[86774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010879"},{"annotations":[86835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012873"},{"annotations":[85569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014801"},{"annotations":[86192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010737"},{"annotations":[85926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013870"},{"annotations":[85465,85466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009192"}]},"cv_name":"mondo","definition":"An osteochondrodysplasia that results in abnormalities of bone growth in the vertebral column and the epiphysis.","direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00690":null,"SJAG_00984":null,"SJAG_01615":null,"SJAG_01942":null,"SJAG_03467":null,"SJAG_03952":null,"SJAG_04096":null,"SJAG_04285":null,"SJAG_04582":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:252","MedDRA:10062920","ICD9:756.9","UMLS:C0038015","DOID:0112280","MEDGEN:20916"],"synonyms":[{"name":"SED","type":"exact"},{"name":"spondyloepiphyseal dysplasia","type":"exact"}],"termid":"MONDO:0016761","terms_by_termid":{"MONDO:0009192":null,"MONDO:0010737":null,"MONDO:0010879":null,"MONDO:0012873":null,"MONDO:0013870":null,"MONDO:0014455":null,"MONDO:0014801":null,"MONDO:0030019":null,"MONDO:0054561":null},"xrefs":{"Monarch":{"xref_id":"0016761"}}}


id: PBO:0084573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein of the plasma membrane and ER; interacts specifically in vivo with the phospholipid translocase (flippase) Dnf1p; involved in translocation of phospholipids and alkylphosphocholine drugs across the plasma membrane; null mutant requires tryptophan due to mislocalization of tryptophan permease Tat2p","termid":"PBO:0084573"}


id: MONDO:0019556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pressure-induced localized lipoatrophy is a rare, acquired, localized lipodystrophy characterized by band-like, horizontal, asymptomatic, lipoatrophic depressions with clinically normal overlying skin usually involving the anterolateral aspect of the thighs. An identifiable history of the repeated mechanical microtrauma due to occupational or postural habits is present.","definition_xrefs":["Orphanet:90160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lipodystrophy","termid":"MONDO:0019194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"pressure-induced localized lipoatrophy","secondary_identifiers":["SCTID:238898001","UMLS:C1260961","GARD:19129","MEDGEN:687584"],"synonyms":[{"name":"lipoatrophia semicircularis","type":"exact"},{"name":"semicircular lipoatrophy","type":"exact"}],"termid":"MONDO:0019556","xrefs":{"Monarch":{"xref_id":"0019556"}}}


id: PBO:0026783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_synthesis_involved_in_mitotic_DNA_replication","termid":"PBO:0026783"}


id: MOD:00856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to an L-alaninium (protonated L-alanine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-alanine (L-alaninium) residue","termid":"MOD:00856"}


id: GO:0090237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"regulates","term_name":"arachidonate secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of arachidonate secretion","synonyms":[{"name":"regulation of arachidonic acid secretion","type":"exact"}],"termid":"GO:0090237"}


id: MONDO:0015614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatitis herpetiformis (DH) is a chronic autoimmune subepidermal bullous disease characterized by grouped pruritic lesions such as papules, urticarial plaques, erythema, and herpetiform vesiculae, with a predominantly symmetrical distribution on extensor surfaces of the elbows (90%), knees (30%), shoulders, buttocks, sacral region, and face of children and adults. Erosions, excoriations and hyperpigmentation usually follow. DH may also appear as a consequence of gluten intolerance.","definition_xrefs":["Orphanet:1656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"dermatitis herpetiformis","secondary_identifiers":["MEDGEN:8327","MESH:D003874","NCIT:C26742","SCTID:111196000","ICD9:694.0","UMLS:C0011608","DOID:8505","Wikipedia:Dermatitis_herpetiformis","GARD:10075","ICD10CM:L13.0","icd11.foundation:286313127","MedDRA:10012468","EFO:1000684"],"synonyms":[{"name":"Duhring's disease","type":"exact"},{"name":"Durhing-Brocq disease","type":"exact"},{"name":"dermatitis herpetiformis","type":"exact"},{"name":"dermatosis herpetiformis","type":"exact"}],"termid":"MONDO:0015614","xrefs":{"Monarch":{"xref_id":"0015614"}}}


id: MONDO:0016460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyvalvular heart disease syndrome is a recently described syndrome characterized by the combination of polyvalvular heart disease, short stature, facial anomalies and intellectual deficit.","definition_xrefs":["Orphanet:228410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"polyvalvular heart disease syndrome","secondary_identifiers":["MEDGEN:1376905","UMLS:C4509918","GARD:20594","SCTID:723448007"],"synonyms":[{"name":"PHD syndrome","type":"exact"}],"termid":"MONDO:0016460","xrefs":{"Monarch":{"xref_id":"0016460"}}}


id: GO:0046765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral budding that starts with formation of a membrane curvature in the host nuclear membrane.","definition_xrefs":["ISBN:0072370319","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"},{"relation_name":"part_of","term_name":"exit of virus from host cell nucleus by nuclear egress","termid":"GO:0046802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from nuclear membrane","secondary_identifiers":["GO:0046749"],"synonyms":[{"name":"nuclear membrane viral budding","type":"exact"},{"name":"nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from nuclear membrane","type":"exact"},{"name":"virus budding from nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046765"}


id: GO:0014885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an injury stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of wounding","termid":"GO:0014822"},{"relation_name":"is_a","term_name":"response to injury involved in regulation of muscle adaptation","termid":"GO:0014876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of injury involved in regulation of muscle adaptation","synonyms":[{"name":"detection of injury involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014885"}


id: FYPO:0002952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of S-methyl-L-ergothioneine measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased S-methyl-L-ergothioneine level during G0","synonyms":[{"name":"increased S-methyl-L-ergothioneine accumulation during G0","type":"related"},{"name":"increased S-methyl-L-ergothioneine level during cell quiescence","type":"exact"},{"name":"increased S-methyl-L-ergothioneine level during quiescence","type":"exact"}],"termid":"FYPO:0002952"}


id: PBO:0062554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily S member 24 pseudogene","termid":"PBO:0062554"}


id: PBO:0083211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF SEC59/YML013C","termid":"PBO:0083211"}


id: PATO:0001262
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red","termid":"PATO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light red","termid":"PATO:0001262"}


id: GO:0086019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the heart process that regulates cardiac muscle contraction; beginning with the generation of an action potential in the sinoatrial node and ending with regulation of contraction of the myocardium.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in cardiac conduction","synonyms":[{"name":"cell-cell signalling involved in cardiac conduction","type":"exact"}],"termid":"GO:0086019"}


id: MONDO:0018767
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85785],"is_not":false,"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"Any trimethylaminuria in which the cause of the disease is a mutation in the FMO3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"trimethylaminuria","termid":"MONDO:0011182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"severe primary trimethylaminuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:468726","MESH:C536561","HP:0003614","MEDGEN:1814174","OMIM:602079","GARD:6447","DOID:0080361","UMLS:C5575503"],"synonyms":[{"name":"TMAU","type":"related"},{"name":"TMAuria","type":"related"},{"name":"fish malodor syndrome","type":"related"},{"name":"fish odor syndrome","type":"related"},{"name":"fish odour syndrome","type":"related"},{"name":"fish-odor syndrome","type":"related"},{"name":"stale fish syndrome","type":"related"},{"name":"trimethylaminuria","type":"broad"}],"termid":"MONDO:0018767","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0018767"}}}


id: PBO:0054360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1753","termid":"PBO:0054360"}


id: MONDO:0008766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amaurosis hypertrichosis is characterized by severe retinal dystrophy marked by visual impairment and profound photophobia without night blindness. Eye examination suggested a cone-rod type of congenital amaurosis. Trichomegaly, bushy eyebrows with synophyrys, and excessive facial and body hair were also reported. The syndrome has been described in two female cousins both born to consanguineous parents.","definition_xrefs":["Orphanet:1021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"amaurosis-hypertrichosis syndrome","secondary_identifiers":["OMIM:204110","UMLS:C1857588","GARD:637","ICD10CM:H35.5","MESH:C536604","MEDGEN:341805","SCTID:720983002"],"synonyms":[{"name":"amaurosis congenita cone-rod type with congenital hypertrichosis","type":"related"},{"name":"amaurosis congenita, cone-rod type, with congenital hypertrichosis","type":"related"}],"termid":"MONDO:0008766","xrefs":{"Monarch":{"xref_id":"0008766"}}}


id: PBO:0052859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-2","termid":"PBO:0052859"}


id: PBO:0042825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 4A","termid":"PBO:0042825"}


id: GO:1902366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Notch signaling pathway involved in somitogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:21795391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway","termid":"GO:0008593"},{"relation_name":"regulates","term_name":"Notch signaling pathway involved in somitogenesis","termid":"GO:1902359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Notch signaling pathway involved in somitogenesis","synonyms":[{"name":"regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:1902366"}


id: GO:1901741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myoblast fusion.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:21364645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060143"},{"relation_name":"is_a","term_name":"regulation of myoblast fusion","termid":"GO:1901739"},{"relation_name":"positively_regulates","term_name":"myoblast fusion","termid":"GO:0007520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myoblast fusion","synonyms":[{"name":"activation of myoblast fusion","type":"narrow"},{"name":"up regulation of myoblast fusion","type":"exact"},{"name":"up-regulation of myoblast fusion","type":"exact"},{"name":"upregulation of myoblast fusion","type":"exact"}],"termid":"GO:1901741"}


id: PBO:0062194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily R member 3 pseudogene","termid":"PBO:0062194"}


id: PBO:0047246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 237 member B","termid":"PBO:0047246"}


id: PR:000046670
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe sre2 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor sre2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC354.05c","synonyms":[{"name":"Spom-sre2","type":"exact"},{"name":"sterol regulatory element-binding protein 2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000046670"}


id: PBO:0067516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 657, pseudogene","termid":"PBO:0067516"}


id: PBO:0053023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LanC like family member 3","termid":"PBO:0053023"}


id: MONDO:0957240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 24","secondary_identifiers":["DOID:0081449","MEDGEN:1841082","UMLS:C5830446","OMIM:620342"],"termid":"MONDO:0957240","xrefs":{"Monarch":{"xref_id":"0957240"}}}


id: PBO:0068710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 91, pseudogene","termid":"PBO:0068710"}


id: PBO:0113464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial alpha-ketoglutarate dehydrogenase; recruits E3 subunit (Lpd1p) to the E1-E2 (Kgd1p, Kgd2p) core; exists in two forms derived from a single mRNA translated from two alternative start sites; evolutionarily conserved role in the organization of mitochondrial α-KGDH complexes; homolog of human KGD4","termid":"PBO:0113464"}


id: MONDO:0017604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually indolent mature B-cell lymphoma, arising from the marginal zone of lymphoid tissues. It is characterized by the presence of small to medium sized atypical lymphocytes. It comprises three entities, according to the anatomic sites involved: extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue, which affects extranodal sites (most often stomach, lung, skin, and ocular adnexa); nodal marginal zone B-cell lymphoma, which affects lymph nodes without evidence of extranodal disease; and splenic marginal zone B-cell lymphoma, which affects the spleen and splenic hilar lymph nodes, bone marrow, and often the peripheral blood.","definition_xrefs":["NCIT:C4341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent B-cell non-Hodgkin lymphoma","termid":"MONDO:0017594"},{"relation_name":"is_a","term_name":"spleen neoplasm","termid":"MONDO:0036696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"marginal zone lymphoma","secondary_identifiers":["ONCOTREE:MZL","EFO:1000630","ICDO:9699/3","MEDGEN:277950","UMLS:C1367654","Orphanet:300912","SCTID:447100004","GARD:13237","DOID:0050748"],"synonyms":[{"name":"MZBCL","type":"exact"},{"name":"MZL","type":"exact"},{"name":"lymphoma of marginal zone B cell","type":"exact"},{"name":"marginal zone B cell lymphoma","type":"exact"},{"name":"marginal zone B-cell lymphoma","type":"exact"},{"name":"marginal zone lymphoma","type":"exact"}],"termid":"MONDO:0017604","xrefs":{"Monarch":{"xref_id":"0017604"}}}


id: MONDO:0012864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"2q32q33 microdeletion syndrome is a recently described syndrome characterized by a variable phenotype involving moderate to severe intellectual deficit, significant speech delay, persistent feeding difficulties, growth retardation and dysmorphic features.","definition_xrefs":["Orphanet:251019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"},{"relation_name":"is_a","term_name":"SATB2 associated disorder","termid":"MONDO:0100147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2q32-q33 deletion syndrome","secondary_identifiers":["DOID:0060428","OMIM:612313","UMLS:C2676739","MEDGEN:436765","SCTID:719659003","GARD:13206","Orphanet:576283","MESH:C567350"],"synonyms":[{"name":"2q32-q33 microdeletion syndrome","type":"exact"},{"name":"2q32q33 microdeletion syndrome","type":"exact"},{"name":"2q32q33 microdeletion syndromes","type":"related"},{"name":"Del(2)(q32)","type":"exact"},{"name":"Del(2)(q32q33)","type":"exact"},{"name":"SAS","type":"related"},{"name":"SATB2 syndrome","type":"related"},{"name":"SATB2-associated syndrome","type":"related"},{"name":"chromosome 2q32-q33 deletion syndrome","type":"exact"},{"name":"glass","type":"related"},{"name":"glass syndrome","type":"exact"},{"name":"monosomy 2q32","type":"exact"},{"name":"monosomy 2q32-q33","type":"exact"},{"name":"monosomy 2q32q33","type":"exact"}],"termid":"MONDO:0012864","xrefs":{"Monarch":{"xref_id":"0012864"}}}


id: MONDO:0007135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"anonychia-onychodystrophy syndrome","termid":"MONDO:0019577"},{"relation_name":"is_a","term_name":"isolated congenital anonychia","termid":"MONDO:0019211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 6","secondary_identifiers":["GARD:15040","MEDGEN:477175","OMIM:107000","DOID:0080084","UMLS:C3275544"],"synonyms":[{"name":"NDNC6","type":"related"},{"name":"absent nails and dystrophic nails","type":"related"},{"name":"anonychia, partial","type":"related"},{"name":"anonychia/hyponychia and onychodystrophy","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 6","type":"related"},{"name":"nonsyndromic congenital nail disorder type 6","type":"exact"},{"name":"onychodystrophy-anonychia","type":"related"}],"termid":"MONDO:0007135","xrefs":{"Monarch":{"xref_id":"0007135"}}}


id: MONDO:0032869
data:
  {"annotated_genes":["SJAG_07003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86641],"is_not":false,"summary":null,"term":"MONDO:0032869"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_07003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 5 (ATP synthase) deficiency, nuclear type 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684729","DOID:0111749","OMIM:618683","GARD:18673","UMLS:C5231461"],"synonyms":[{"name":"MC5DN6","type":"related"},{"name":"MITOCHONDRIAL COMPLEX V (ATP SYNTHASE) DEFICIENCY, NUCLEAR TYPE 6","type":"related"}],"termid":"MONDO:0032869","terms_by_termid":{"MONDO:0032869":null},"xrefs":{"Monarch":{"xref_id":"0032869"}}}


id: GO:1901443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to furfural.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to furfural","termid":"GO:1901442"},{"relation_name":"negatively_regulates","term_name":"response to furfural","termid":"GO:1901426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to furfural","synonyms":[{"name":"down regulation of response to furfural","type":"exact"},{"name":"down-regulation of response to furfural","type":"exact"},{"name":"downregulation of response to furfural","type":"exact"},{"name":"inhibition of response to furfural","type":"narrow"}],"termid":"GO:1901443"}


id: PBO:0063299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma constant","termid":"PBO:0063299"}


id: MONDO:0003468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial sarcoma characterized by the presence of both an epithelial and a spindle cell component.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synovial sarcoma","termid":"MONDO:0010434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"biphasic synovial sarcoma","secondary_identifiers":["NCIT:C4279","DOID:5492","MEDGEN:137773","UMLS:C0334507","ICDO:9043/3"],"synonyms":[{"name":"biphasic sarcoma of synovium","type":"exact"},{"name":"biphasic sarcoma of the synovium","type":"exact"},{"name":"synovial sarcoma, biphasic","type":"exact"},{"name":"synovial sarcoma, biphasic (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003468","xrefs":{"Monarch":{"xref_id":"0003468"}}}


id: GO:0010160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that specifies animal organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues.","definition_xrefs":["PMID:9611175","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"animal organ formation","termid":"GO:0048645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of animal organ boundary","secondary_identifiers":["GO:0048862"],"synonyms":[{"name":"organ boundary specification","type":"exact"}],"termid":"GO:0010160"}


id: GO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of dehydroepiandrosterone (3beta-hydroxyandrost-5-en-17-one) into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"dehydroepiandrosterone secretion","synonyms":[{"name":"3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"DHEA secretion","type":"exact"},{"name":"dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:0035942"}


id: PBO:0079965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 3","termid":"PBO:0079965"}


id: MONDO:0011031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the EYA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 10","secondary_identifiers":["DOID:0110542","MESH:C563354","OMIM:601316","GARD:18103","UMLS:C1832476","MEDGEN:321966"],"synonyms":[{"name":"DFNA10","type":"narrow"},{"name":"EYA4 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 10","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 10","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in EYA4","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 10","type":"narrow"},{"name":"autosomal dominant nonsyndromic hearing loss 10","type":"exact"},{"name":"deafness, autosomal dominant 10","type":"narrow"},{"name":"deafness, autosomal dominant type 10","type":"narrow"}],"termid":"MONDO:0011031","xrefs":{"Monarch":{"xref_id":"0011031"}}}


id: PBO:0047340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBN1 divergent transcript","termid":"PBO:0047340"}


id: GO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pectin + H2O = pectate + acetate. This reaction is the hydrolysis of acetyl esters of pectin, producing pectate, partially esterified pectin.","definition_xrefs":["PMID:9218776","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"pectin acetylesterase activity","termid":"GO:0052793"}


id: PBO:0034735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil protein involved in septum formation Rng10","termid":"PBO:0034735"}


id: GO:0071825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-lipid complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-lipid complex organization","synonyms":[{"name":"protein-lipid complex subunit organisation","type":"exact"},{"name":"protein-lipid complex subunit organization","type":"exact"}],"termid":"GO:0071825"}


id: PBO:0116251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in protein folding, human TAPT1 ortholog","termid":"PBO:0116251"}


id: GO:0044332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell contributing to the establishment, maintenance and elaboration of the dorsal/ventral axis.","definition_xrefs":["GOC:yaf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:0044332)","synonyms":[{"name":"Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:0044332"}


id: PBO:0056849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal glutathione S-transferase 1","termid":"PBO:0056849"}


id: GO:0030690
data:
  {"annotated_genes":["SJAG_01275","SJAG_04346","SJAG_01494"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72665,79976,97634],"is_not":false,"summary":null,"term":"GO:0030690"}]},"cv_name":"cellular_component","definition":"A heterodimer associated with 90S and 66S preribosomes. Predominantly, but not exclusively, nucleolar; involved in ribosomal large subunit biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noc complex","termid":"GO:0030689"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"},{"relation_name":"part_of","term_name":"preribosome, large subunit precursor","termid":"GO:0030687"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01275":null,"SJAG_01494":null,"SJAG_04346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0030684"],"is_obsolete":false,"name":"Noc1p-Noc2p complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030690","terms_by_termid":{"GO:0030690":null}}


id: GO:0047190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-acyl-sn-glycero-3-phosphocholine + acyl-CoA = 1,2-diacyl-sn-glycero-3-phosphocholine + CoA.","definition_xrefs":["RHEA:10332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"2-acylglycerophosphocholine O-acyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.62-RXN","KEGG_REACTION:R01319","EC:2.3.1.62"],"synonyms":[{"name":"2-acylglycerol-3-phosphorylcholine acyltransferase activity","type":"related"},{"name":"2-acylglycerophosphocholine acyltransferase activity","type":"related"},{"name":"acyl-CoA:2-acyl-sn-glycero-3-phosphocholine O-acyltransferase activity","type":"related"}],"termid":"GO:0047190"}


id: PBO:0065522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 2 pseudogene 2","termid":"PBO:0065522"}


id: GO:1904466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of matrix metallopeptidase secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of matrix metallopeptidase secretion","termid":"GO:1904464"},{"relation_name":"positively_regulates","term_name":"matrix metallopeptidase secretion","termid":"GO:1990773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of matrix metallopeptidase secretion","synonyms":[{"name":"activation of MMP secretion","type":"narrow"},{"name":"activation of matrix metallopeptidase secretion","type":"narrow"},{"name":"activation of matrix metalloproteinase secretion","type":"narrow"},{"name":"positive regulation of MMP secretion","type":"exact"},{"name":"positive regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"up regulation of MMP secretion","type":"exact"},{"name":"up regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"up regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"up-regulation of MMP secretion","type":"exact"},{"name":"up-regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"up-regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"upregulation of MMP secretion","type":"exact"},{"name":"upregulation of matrix metallopeptidase secretion","type":"exact"},{"name":"upregulation of matrix metalloproteinase secretion","type":"narrow"}],"termid":"GO:1904466"}


id: PBO:0052065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT6A antisense RNA 1","termid":"PBO:0052065"}


id: PBO:0045969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early growth response 2","termid":"PBO:0045969"}


id: GO:0052792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of xylogalacturonate by cleavage of the alpha-(1,4)-linkage. Xylogalacturonate (XGA) is composed of a chain of alpha-(1,4)-linked D-galacturonic acid residues with beta-D-xylose substituted at the O3 position.","definition_xrefs":["GOC:mengo_curators","PMID:10618200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"endo-xylogalacturonan hydrolase activity","synonyms":[{"name":"endo-galacturonase activity","type":"broad"}],"termid":"GO:0052792"}


id: PBO:0056984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30c-2","termid":"PBO:0056984"}


id: GO:0070691
data:
  {"annotated_genes":["SJAG_03061","SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108628,108784],"is_not":false,"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"A dimeric positive transcription elongation factor complex b that comprises a cyclin-dependent kinase containing the catalytic subunit, Cdk9, and a regulatory subunit, cyclin T.","definition_xrefs":["PMID:16721054","Wikipedia:P-TEFb","GOC:vw","PMID:19328067","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin/CDK positive transcription elongation factor complex","termid":"GO:0008024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01213":null,"SJAG_03061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005654","GO:0032991"],"is_obsolete":false,"name":"P-TEFb complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Bur1/Bur2 complex","type":"narrow"},{"name":"Sgv1/Bur2 complex","type":"narrow"},{"name":"cyclin-dependent kinase 9 (Cdk9)-cyclin T1 complex","type":"narrow"},{"name":"cyclin-dependent kinase 9 (Cdk9)-cyclin T2 complex","type":"narrow"},{"name":"dimeric positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0070691","terms_by_termid":{"GO:0070691":null}}


id: GO:0006458
data:
  {"annotated_genes":["SJAG_02461","SJAG_00112","SJAG_03267","SJAG_00750","SJAG_03237","SJAG_01510","SJAG_05206","SJAG_05189","SJAG_04784","SJAG_01664","SJAG_03094","SJAG_04741"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78353,89061,95366],"is_not":false,"summary":null,"term":"GO:0006458"},{"annotations":[87246,98317,103474,100466,117382,117482,104440,74752,79778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051083"}]},"cv_name":"biological_process","definition":"The process of assisting in the folding of a nascent peptide chain into its correct tertiary structure.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00750":null,"SJAG_01510":null,"SJAG_01664":null,"SJAG_02461":null,"SJAG_03094":null,"SJAG_03237":null,"SJAG_03267":null,"SJAG_04741":null,"SJAG_04784":null,"SJAG_05189":null,"SJAG_05206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006457","GO:0051604"],"is_obsolete":false,"name":"'de novo' protein folding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nascent chain protein folding","type":"exact"}],"termid":"GO:0006458","terms_by_termid":{"GO:0006458":null,"GO:0051083":null}}


id: MONDO:1010713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyruvate dehydrogenase deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency, non-human animal","termid":"MONDO:1010105"},{"relation_name":"is_a","term_name":"peripheral neuropathy, dog","termid":"MONDO:1011007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase deficiency, dog","secondary_identifiers":["OMIA:001406-9615"],"termid":"MONDO:1010713","xrefs":{"Monarch":{"xref_id":"1010713"}}}


id: PBO:0028602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_glucose_starvation","termid":"PBO:0028602"}


id: GO:0034104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tissue remodeling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tissue remodeling","synonyms":[{"name":"negative regulation of tissue remodelling","type":"exact"}],"termid":"GO:0034104"}


id: MONDO:0006629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noninflammatory degenerative disease of the hip joint which usually appears in late middle or old age. It is characterized by growth or maturational disturbances in the femoral neck and head, as well as acetabular dysplasia. A dominant symptom is pain on weight-bearing or motion.","definition_xrefs":["MESH:D015207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis","termid":"MONDO:0005178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, hip","secondary_identifiers":["UMLS:C0029410","EFO:1000786","NCIT:C34876","MEDGEN:14530"],"synonyms":[{"name":"hip osteoarthritis","type":"exact"}],"termid":"MONDO:0006629","xrefs":{"Monarch":{"xref_id":"0006629"}}}


id: PBO:0030800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030800"}


id: PR:O94392
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2H10.01 gene.","definition_xrefs":["UniProtKB:O94392","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C2H10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2H10.01","synonyms":[{"name":"Spom972h-SPAC2H10.01","type":"exact"}],"termid":"PR:O94392"}


id: PBO:0027443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-UGA_suppression","termid":"PBO:0027443"}


id: PBO:0079508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 6","termid":"PBO:0079508"}


id: SO:0001978
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where developer information is encoded.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signature","synonyms":[{"name":"DNA signature","type":"exact"}],"termid":"SO:0001978"}


id: PBO:0027506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-h-_specific_sterility","termid":"PBO:0027506"}


id: PBO:0077931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 4","termid":"PBO:0077931"}


id: PBO:0041392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 63","termid":"PBO:0041392"}


id: FYPO:0003681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a protein found associated with chromatin at the centromere outer repeat heterochromatin is lower than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:20018856","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level at centromere outer repeat heterochromatin","synonyms":[{"name":"decreased protein level at centromere otr","type":"exact"},{"name":"decreased protein level at centromere outer repeat chromatin","type":"exact"},{"name":"decreased protein level at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein level at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein level at centromeric outer repeat region","type":"exact"},{"name":"decreased protein level at pericentric region","type":"related"},{"name":"decreased protein level at pericentromeric region","type":"related"},{"name":"reduced protein level at centromere outer repeat","type":"exact"}],"termid":"FYPO:0003681"}


id: PBO:0049860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECW2 antisense RNA 1","termid":"PBO:0049860"}


id: PR:P87057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nhp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-histone chromosomal protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.09c","synonyms":[{"name":"Spom972h-nhp6","type":"exact"}],"termid":"PR:P87057"}


id: PATO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A waxiness which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"},{"relation_name":"is_a","term_name":"waxiness","termid":"PATO:0002381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased waxiness","termid":"PATO:0002382"}


id: GO:0043453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkyne, any acyclic branched or unbranched hydrocarbon (compound composed only of carbon and hydrogen) having a carbon-carbon triple bond and the general formula CnH2n-2.","definition_xrefs":["GOC:jl","Wikipedia:Alkyne","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkyne metabolic process","termid":"GO:0043452"},{"relation_name":"is_a","term_name":"acetylenic compound biosynthetic process","termid":"GO:0120247"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkyne biosynthetic process","synonyms":[{"name":"alkyne anabolism","type":"exact"},{"name":"alkyne biosynthesis","type":"exact"},{"name":"alkyne formation","type":"exact"},{"name":"alkyne synthesis","type":"exact"}],"termid":"GO:0043453"}


id: PBO:0049687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepcidin antimicrobial peptide","termid":"PBO:0049687"}


id: MONDO:0012307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial scaphocephaly syndrome, McGillivray type is a rare newly described craniosynostosis syndrome characterized by scaphocephaly, macrocephaly, severe maxillary retrusion, and mild intellectual disability.","definition_xrefs":["Orphanet:168624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial scaphocephaly syndrome","termid":"MONDO:0015704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"familial scaphocephaly syndrome, McGillivray type","secondary_identifiers":["UMLS:C1865070","GARD:3426","OMIM:609579","icd11.foundation:512057922","MEDGEN:355365","MESH:C566511"],"synonyms":[{"name":"scaphocephaly, maxillary retrusion, and intellectual disability","type":"related"},{"name":"scaphocephaly, maxillary retrusion, and mental retardation","type":"related"},{"name":"scaphocephaly-macrocephaly-maxillary retrusion-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0012307","xrefs":{"Monarch":{"xref_id":"0012307"}}}


id: PBO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 192","termid":"PBO:0042120"}


id: FYPO:0004322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a smaller portion of the centromeric region of the chromosome than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PomBase:vw","GO:0034080","PomBase:mah","PMID:18493607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased spatial extent of CENP-A containing chromatin assembly","synonyms":[{"name":"decreased extent of CENP-A containing nucleosome","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"decreased spatial extent of CENP-A deposition","type":"related"},{"name":"decreased spatial extent of CENP-A loading","type":"related"},{"name":"decreased spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"decreased spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"decreased spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"decreased spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"decreased spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"reduced spatial extent of CENP-A containing nucleosome assembly","type":"exact"}],"termid":"FYPO:0004322"}


id: FYPO:0007130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homoserine O-acetyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homoserine O-acetyltransferase activity","termid":"FYPO:0007129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished homoserine O-acetyltransferase activity","synonyms":[{"name":"homoserine O-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0007130"}


id: MONDO:0018646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, autoimmune inflammatory liver disorder characterized by narrowing and scarring of the lumen of the bile ducts. It is often seen in patients with ulcerative colitis. Signs and symptoms include jaundice, fatigue, and malabsorption. It may lead to cirrhosis and liver failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholangitis","termid":"MONDO:0004789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"sclerosing cholangitis","secondary_identifiers":["MEDGEN:3036","NANDO:1200440","NANDO:2100265","NCIT:C4828","EFO:0004268","SCTID:235917005","HP:0030991","DOID:14268","Orphanet:447771","UMLS:C0008313","GARD:21868"],"synonyms":[{"name":"Primary sclerosing cholangitis","type":"exact"},{"name":"fibrosing cholangitis","type":"exact"},{"name":"primary sclerosing cholangitis (PSC)","type":"exact"},{"name":"sclerosing cholangitis","type":"exact"},{"name":"sclerosing cholangitis (disease)","type":"exact"}],"termid":"MONDO:0018646","xrefs":{"Monarch":{"xref_id":"0018646"}}}


id: PBO:0044020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 2 pseudogene 1","termid":"PBO:0044020"}


id: PBO:0050006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIVEP zinc finger 3","termid":"PBO:0050006"}


id: PBO:0014609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF complex corepressor nrm1","termid":"PBO:0014609"}


id: MONDO:0012015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus 3, congenital, autosomal dominant","secondary_identifiers":["MEDGEN:374873","OMIM:608345","DOID:0111793","UMLS:C1842186","MESH:C537855"],"synonyms":[{"name":"NYS3","type":"exact"},{"name":"NYSTAGMUS 3, congenital, autosomal dominant","type":"related"}],"termid":"MONDO:0012015","xrefs":{"Monarch":{"xref_id":"0012015"}}}


id: PBO:0003419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribose diphosphatase, NudF subfamily (predicted)","termid":"PBO:0003419"}


id: MONDO:0011135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superior transverse scapular ligament, calcification of, familial","secondary_identifiers":["MESH:C566638","UMLS:C1866424","MEDGEN:355711","OMIM:601708"],"synonyms":[{"name":"superior transverse scapular ligament, calcification of, familial","type":"exact"}],"termid":"MONDO:0011135","xrefs":{"Monarch":{"xref_id":"0011135"}}}


id: PBO:0089545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation associated GTP binding protein Gtp1","termid":"PBO:0089545"}


id: GO:0031565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A mitotic cell cycle checkpoint that detects a defect in cytokinesis and negatively regulates G2/M transition.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis checkpoint (obsolete GO:0031565)","synonyms":[{"name":"contractile ring checkpoint","type":"exact"},{"name":"septin checkpoint","type":"exact"}],"termid":"GO:0031565"}


id: PBO:0018081
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MCM10","termid":"PBO:0018081"}


id: GO:0036513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions in the retrotranslocation step of ERAD (ER-associated protein degradation), and includes at its core Derlin-1 oligomers forming a retrotranslocation channel.","definition_xrefs":["PMID:15215856","GOC:bf","PMID:16186510","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005789","GO:0032991","GO:0005783"],"is_obsolete":false,"name":"Derlin-1 retrotranslocation complex","synonyms":[{"name":"Derlin-1 complex","type":"exact"},{"name":"Derlin-1 protein dislocation complex","type":"exact"},{"name":"Derlin-1 retro-translocation complex","type":"exact"},{"name":"Derlin-1 retrotranslocon","type":"exact"},{"name":"ERAD protein dislocation complex","type":"exact"}],"termid":"GO:0036513"}


id: PBO:0086393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative component of the TOR regulatory pathway; negative regulator of early meiotic gene expression; required, with Pmd1p, for growth under alkaline conditions; has an N-terminal kelch-like domain; MDS3 has a paralog, PMD1, that arose from the whole genome duplication","termid":"PBO:0086393"}


id: PBO:0030120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030120"}


id: PBO:0028880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_ubiquitination","termid":"PBO:0028880"}


id: MONDO:0003479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pneumonia that is an acute inflammation of the lungs induced by inhalation of metal fumes or toxic gasses and vapors. It is a sentinel health event (occupational) associated with exposure to ammonia (refrigeration, fertilizer, and oil refining industries), chlorine (alkali and bleach industries), nitrogen oxides (silo fillers, arc welders, and nitric acid industry), sulfur dioxide (paper, refrigeration, and oil refining industries), cadmium (processors and cadmium smelters), trimellitic anhydride (plastics and organic chemical synthesis), and vanadium pentoxide (boilermakers). The two types of pulmonary agents are central and peripheral. Central pulmonary agents, for example, ammonia, are water soluble irritants that injure the upper airways. Peripheral pulmonary agents, for example, phosgene, NOx, and PFIB, are slightly water soluble irritants that injure the alveolar-capillary membranes. Chlorine has both central and peripheral effects.","definition_xrefs":["DOID:551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic pneumonitis","secondary_identifiers":["SCTID:233733000","UMLS:C3714582","ICD9:506.9","MEDGEN:811389"],"synonyms":[{"name":"acute chemical fume pulmonary edema","type":"exact"},{"name":"acute chemical fume pulmonary oedema","type":"exact"},{"name":"acute chemical pulmonary edema","type":"exact"},{"name":"acute chemical pulmonary oedema","type":"exact"}],"termid":"MONDO:0003479","xrefs":{"Monarch":{"xref_id":"0003479"}}}


id: MONDO:0021605
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the upper or lower eyelid.","definition_xrefs":["NCIT:C4354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid neoplasm","termid":"MONDO:0002235"},{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"benign eyelid neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0339107","SCTID:231824001","MEDGEN:137911"],"synonyms":[{"name":"benign eyelid neoplasm","type":"exact"},{"name":"benign eyelid tumor","type":"exact"},{"name":"benign eyelid tumour","type":"exact"},{"name":"benign neoplasm of eyelid","type":"exact"},{"name":"benign neoplasm of the eyelid","type":"exact"},{"name":"benign tumor of eyelid","type":"exact"},{"name":"benign tumor of the eyelid","type":"exact"},{"name":"benign tumour of eyelid","type":"exact"},{"name":"benign tumour of the eyelid","type":"exact"},{"name":"eyelid benign neoplasm","type":"exact"}],"termid":"MONDO:0021605","terms_by_termid":{"MONDO:0008097":null},"xrefs":{"Monarch":{"xref_id":"0021605"}}}


id: PBO:0083049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deubiquitinating enzyme anchored to the outer mitochondrial membrane; probably not important for general mitochondrial functioning, but may perform a more specialized function at mitochondria","termid":"PBO:0083049"}


id: MONDO:0017597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"T-cell/histiocyte rich large B cell lymphoma (THRLBCL) is a rare variant of diffuse large B-cell lymphoma (DLBCL), mainly affecting middle-aged men and often not being discovered until an advanced disease stage, with involvement of the spleen, liver and bone marrow occurring at a greater frequency than in DLBCL. It is often difficult to diagnose due to its similarity with other lymphoid diseases such as classic Hodgkin lymphoma and nodular lymphocyte-predominant Hodgkin lymphoma and has an aggressive clinical course.","definition_xrefs":["Orphanet:300857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"T-cell/histiocyte rich large B cell lymphoma","secondary_identifiers":["MEDGEN:232943","icd11.foundation:257833622","UMLS:C1321547","ICDO:9688/3","ICDO:9680/3","ONCOTREE:THRLBCL","NCIT:C9496","GARD:12257"],"synonyms":[{"name":"T-cell rich/histiocyte-rich large B-cell lymphoma","type":"exact"},{"name":"T-cell/histiocyte rich lymphoma","type":"exact"},{"name":"T-cell/histiocyte-rich large B-cell lymphoma","type":"exact"},{"name":"THRLBCL","type":"exact"}],"termid":"MONDO:0017597","xrefs":{"Monarch":{"xref_id":"0017597"}}}


id: MONDO:0100137
data:
  {"annotated_genes":["SJAG_01836","SJAG_05329","SJAG_02194","SJAG_03855","SJAG_05979","SJAG_02396","SJAG_03125","SJAG_02362","SJAG_00566","SJAG_04995","SJAG_01378","SJAG_02200"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015026"},{"annotations":[86332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957264"},{"annotations":[85678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007485"},{"annotations":[84879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014690"},{"annotations":[85924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008030"},{"annotations":[84838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[86335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[86334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[86103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[85934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[85063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[86897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"},{"annotations":[86602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016368"},{"annotations":[84836,84837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016369"}]},"cv_name":"mondo","definition":"Accelerated aging syndromes often caused by inheritable gene mutations resulting in decreased telomere lengths.","definition_xrefs":["PMID:29804726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature aging syndrome","termid":"MONDO:0019303"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00566":null,"SJAG_01378":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_02200":null,"SJAG_02362":null,"SJAG_02396":null,"SJAG_03125":null,"SJAG_03855":null,"SJAG_04995":null,"SJAG_05329":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"telomere syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C152065","UMLS:C4727832","MEDGEN:1668986"],"synonyms":[{"name":"STS","type":"exact"},{"name":"short telomere syndrome","type":"exact"}],"termid":"MONDO:0100137","terms_by_termid":{"MONDO:0007485":null,"MONDO:0008030":null,"MONDO:0013878":null,"MONDO:0014612":null,"MONDO:0014690":null,"MONDO:0015026":null,"MONDO:0016368":null,"MONDO:0016369":null,"MONDO:0030690":null,"MONDO:0800029":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957264":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0100137"}}}


id: PBO:0003451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdc27","termid":"PBO:0003451"}


id: MONDO:0016657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"8p11.2 deletion syndrome is a contiguous gene syndrome characterized by the association of congenital spherocytosis, dysmorphic features, growth delay and hypogonadotropic hypogonadism.","definition_xrefs":["Orphanet:251066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 8","termid":"MONDO:0016890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8p11.2 deletion syndrome","secondary_identifiers":["GARD:20693","UMLS:C4304505","SCTID:719646006","MEDGEN:930174"],"synonyms":[{"name":"Del(8)(p11.2)","type":"exact"},{"name":"monosomy 8p11.2","type":"exact"}],"termid":"MONDO:0016657","xrefs":{"Monarch":{"xref_id":"0016657"}}}


id: PBO:0038753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 3","termid":"PBO:0038753"}


id: FYPO:0001321
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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physical object quality phenotype during vegetative growth","type":"exact"},{"name":"cellular physical quality phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular physical object quality phenotype during vegetative 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id: GO:2000385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ectoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of ectoderm development","termid":"GO:2000383"},{"relation_name":"positively_regulates","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ectoderm development","termid":"GO:2000385"}


id: PBO:0085539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9A has a paralog, RPS9B, that arose from the whole genome duplication","termid":"PBO:0085539"}


id: GO:0033746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the methyl group from a modified arginine residue at position 2 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:29233856","PMID:22483719","PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0032452","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H3R2 demethylase activity","synonyms":[{"name":"histone H3-R2 demethylase activity","type":"exact"},{"name":"histone H3-methyl-arginine-2 demethylase activity","type":"exact"},{"name":"histone H3R2me demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-R2 specific)","type":"exact"}],"termid":"GO:0033746"}


id: MONDO:0004811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic conjunctivitis","termid":"MONDO:0002314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"simple chronic conjunctivitis","secondary_identifiers":["SCTID:8211008","UMLS:C0155146","DOID:9512","MEDGEN:509807","ICD9:372.11"],"termid":"MONDO:0004811","xrefs":{"Monarch":{"xref_id":"0004811"}}}


id: PBO:0040160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid sensing ion channel subunit family member 5","termid":"PBO:0040160"}


id: PBO:0030247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_freezing","termid":"PBO:0030247"}


id: GO:1901589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An arrangement of closely apposed microtubules running parallel to each other in the axon hillock and initial segment.","definition_xrefs":["NIF_Subcellular:sao707332678","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon microtubule bundle","synonyms":[{"name":"axon microtubule fascicle","type":"exact"},{"name":"microtubule bundle of axon","type":"exact"},{"name":"microtubule fascicle of axon","type":"exact"}],"termid":"GO:1901589"}


id: PBO:0083464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MET4/YNL104C","termid":"PBO:0083464"}


id: PBO:0060453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase","termid":"PBO:0060453"}


id: GO:0052841
data:
  {"annotated_genes":["SJAG_00244","SJAG_04870","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114801,88482,104960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052846"},{"annotations":[104961,88483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052847"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: bisdiphospho-1D-myo-inositol tetrakisphosphate + H2O = diphospho-1D-myo-inositol pentakisphosphate + phosphate.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2023973","Reactome:R-HSA-1855165"],"termid":"GO:0052841","terms_by_termid":{"GO:0052846":null,"GO:0052847":null}}


id: PBO:0055858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 5","termid":"PBO:0055858"}


id: MONDO:0027655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allopurinol toxicity","secondary_identifiers":["Orphanet:240845"],"termid":"MONDO:0027655","xrefs":{"Monarch":{"xref_id":"0027655"}}}


id: GO:0102418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: luteolin 7-O-beta-D-glucoside + UDP-alpha-D-glucose = luteolin-7-O-gentiobioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete luteolin-7-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102418)","termid":"GO:0102418"}


id: FYPO:0000804
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119283,119014,119276,119281],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[118847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[119165],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0006433"},{"annotations":[119107,119015,118956,118948,118955,119106,118949,119114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[119243,119255,119258,119244,119246],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001784"},{"annotations":[119249,119254,119242,119241,119245,119257],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[118841],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endomembrane system organization is abnormal. 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S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal endomembrane system organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_03940","SJAG_03449","SJAG_00426","SJAG_04464","SJAG_03891","SJAG_01906","SJAG_01242","SJAG_02763","SJAG_04284","SJAG_01745","SJAG_05207","SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","cmp7delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","vps32delta","nem2delta","nup61delta","ned1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","lem2delta","man1delta","alx1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal endomembrane system organisation","type":"exact"},{"name":"abnormal endomembrane system organization during mitotic cell cycle","type":"related"},{"name":"abnormal endomembrane system organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000804","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0006433":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: SO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that is invalidated due to polyA priming.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invalidated","termid":"SO:0000790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_by_genomic_polyA_primed_cDNA","synonyms":[{"name":"invalidated by genomic polyA primed cDNA","type":"exact"}],"termid":"SO:0000415"}


id: GO:0140061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-hydroxymethylcytosine + 2-oxoglutarate + O2 = 5-formylcytosine + succinate + CO2.","definition_xrefs":["PMID:27918559"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-hydroxymethylcytosine dioxygenase activity (obsolete GO:0140061)","synonyms":[{"name":"5hmC dioxygenase","type":"exact"}],"termid":"GO:0140061"}


id: MONDO:0100256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Germline pathogenic or likely pathogenic variants in the CTNNA1 gene predispose to hereditary diffuse gastric cancer and lobular breast cancer, a cancer susceptibility syndrome inherited in an autosomal dominant pattern.","direct_ancestors":[{"relation_name":"is_a","term_name":"breast lobular carcinoma","termid":"MONDO:0000552"},{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"},{"relation_name":"is_a","term_name":"hereditary breast carcinoma","termid":"MONDO:0016419"},{"relation_name":"is_a","term_name":"hereditary gastric cancer","termid":"MONDO:0018502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"CTNNA1-related diffuse gastric and lobular breast cancer syndrome","termid":"MONDO:0100256","xrefs":{"Monarch":{"xref_id":"0100256"}}}


id: PBO:0053338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 205","termid":"PBO:0053338"}


id: PBO:0080674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHAMM pseudogene 1","termid":"PBO:0080674"}


id: PBO:0059625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier 1","termid":"PBO:0059625"}


id: PBO:0076524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 37 pseudogene","termid":"PBO:0076524"}


id: PBO:0053861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1134","termid":"PBO:0053861"}


id: MONDO:1011629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaking, non-human animal","secondary_identifiers":["OMIA:000846"],"termid":"MONDO:1011629","xrefs":{"Monarch":{"xref_id":"1011629"}}}


id: PBO:0027225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bent_vegetative_cell","termid":"PBO:0027225"}


id: PBO:0027241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_binucleate_aseptate_cell","termid":"PBO:0027241"}


id: MONDO:0035159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital tumor characterized by a benign cyst with epithelial and epidermoid components, originating from embryologic displacement and ectopic growth of ectodermal tissue in the central nervous system. In contrast to epidermoid cysts, dermoid cysts also contain dermis and skin appendages. Most common location is the lumbosacral region, as well as the cerebellopontine angle and parasellar area for intracranial lesions. Clinical presentation depends on the location and size of the tumor and includes pain, muscle weakness, motor and sensory disturbances, and incontinence for intraspinal lesions, and intracranial hypertension, gait disturbances, cranial nerve dysfunction, and visual deficits for intracranial tumors. The cysts may rupture and cause chemical meningitis.","definition_xrefs":["Orphanet:530033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermoid or epidermoid cyst of the central nervous system","secondary_identifiers":["ICD10CM:Q07.8","UMLS:C5680190","MEDGEN:1842182","GARD:22206"],"synonyms":[{"name":"Dermoid or epidermoid cyst of the CNS","type":"exact"}],"termid":"MONDO:0035159","xrefs":{"Monarch":{"xref_id":"0035159"}}}


id: GO:0035454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid inner membrane consisting of gene products and protein complexes that are loosely bound to its stromal surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of lumenal side of plastid thylakoid membrane","termid":"GO:0035450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of stromal side of plastid inner membrane","synonyms":[{"name":"extrinsic to stromal leaflet of plastid inner membrane","type":"exact"},{"name":"extrinsic to stromal side of plastid inner membrane","type":"narrow"},{"name":"peripheral to stromal side of plastid inner membrane","type":"exact"}],"termid":"GO:0035454"}


id: RO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"this relation holds between c and p when c is part of some c', and c' is capable of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"part_of_structure_that_is_capable_of","termid":"RO:0002329"}


id: MONDO:0005095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of inflammatory rheumatic diseases associated with arthritis and enthesitis, and often involving the axial skeleton. The most common form of spondyloarthritis is ankylosing spondylitis. Other forms include axial spondyloarthritis, peripheral spondyloarthritis, reactive arthritis, psoriatic arthritis/spondylitis and enteropathic arthritis/spondylitis.","definition_xrefs":["NCIT:C116778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"spondyloarthropathy","secondary_identifiers":["MESH:D055009","SCTID:372109003","SCTID:8847002","DOID:1123","UMLS:C0949691","EFO:0000706","MEDGEN:181888"],"synonyms":[{"name":"seronegative spondyloarthropathy","type":"exact"},{"name":"spondarthropathy","type":"exact"},{"name":"spondylarthropathy","type":"related"},{"name":"spondylarthrosis","type":"exact"},{"name":"spondyloarthritis","type":"exact"}],"termid":"MONDO:0005095","xrefs":{"Monarch":{"xref_id":"0005095"}}}


id: PBO:0031044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_substance_in_growth_medium","termid":"PBO:0031044"}


id: PR:O13991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26H5.09c gene.","definition_xrefs":["UniProtKB:O13991","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C26H5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.09c","synonyms":[{"name":"Spom972h-SPAC26H5.09c","type":"exact"}],"termid":"PR:O13991"}


id: PBO:0031383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth","termid":"PBO:0031383"}


id: PBO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_UV","termid":"PBO:0036089"}


id: GO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A trimeric protein complex which in E. coli is composed of the subunits MreB, MreC and MreD. The complex directs longitudinal cell wall synthesis, maintaining cell morphology.","definition_xrefs":["GOC:jl","PMID:15612918"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome segregation-directing complex (obsolete GO:0043913)","synonyms":[{"name":"MreBCD complex","type":"narrow"},{"name":"chromosome segregation directing complex","type":"exact"},{"name":"longitudinal peptidoglycan synthesis-directing complex","type":"exact"}],"termid":"GO:0043913"}


id: PBO:0072689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX1 intronic transcript 1","termid":"PBO:0072689"}


id: GO:0098648
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialised collagen fibril that functions as an anchor, binding to other collagen structures.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex of collagen trimers","termid":"GO:0098644"},{"relation_name":"part_of","term_name":"basement membrane/interstitial matrix interface","termid":"GO:0140086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen anchoring fibril","termid":"GO:0098648"}


id: GO:0120196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of anther dehiscence.","definition_xrefs":["PMID:30911018","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anther dehiscence","termid":"GO:0120194"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"anther dehiscence","termid":"GO:0009901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anther dehiscence","termid":"GO:0120196"}


id: MONDO:1010163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetradysmelia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetradysmelia, non-human animal","secondary_identifiers":["OMIA:002297"],"termid":"MONDO:1010163","xrefs":{"Monarch":{"xref_id":"1010163"}}}


id: MOD:00300
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamyl-5-poly(ADP-ribose).","definition_xrefs":["PubMed:8533153","Unimod:213#E","DeltaMass:0","PubMed:11246023","PubMed:15842200","RESID:AA0295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamyl-5-poly(ADP-ribose)","synonyms":[{"name":"(S)-2-amino-5-poly[2'-adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with 1alpha-D-ribofuranosyl]oxy-5-oxopentanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"L-glutamyl-5-poly(ADP-ribose)","type":"exact"},{"name":"L-isoglutamyl-poly(ADP-ribose)","type":"exact"},{"name":"MOD_RES PolyADP-ribosyl glutamic acid","type":"exact"},{"name":"O-ADP-ribosylation (on Glutamate or C terminus)","type":"exact"}],"termid":"MOD:00300"}


id: GO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plastoglobule. Plastoglobule is a lipoprotein particle present in chloroplasts. They are rich in non-polar lipids (triglycerides, esters) as well as in prenylquinones, plastoquinone and tocopherols. Plastoglobules are often associated with thylakoid membranes, suggesting an exchange of lipids with thylakoids.","definition_xrefs":["PMID:20813909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastoglobule organization","synonyms":[{"name":"plastoglobule organisation","type":"exact"}],"termid":"GO:0080177"}


id: SO:1000155
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby a transposition occurred between chromosomes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_transposition","termid":"SO:0000453"},{"relation_name":"is_a","term_name":"interchromosomal_mutation","termid":"SO:1000031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_transposition","synonyms":[{"name":"(Drosophila)Tp","type":"related"},{"name":"interchromosomal transposition","type":"exact"}],"termid":"SO:1000155"}


id: GO:1990299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein complex localization that acts on a Bub1-Bub3 complex; as a result, the complex is transported to, or maintained in, a specific location at the kinetochore.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"Bub1-Bub3 complex localization to kinetochore","termid":"GO:1990299"}


id: PBO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe HomeoboX","termid":"PBO:0001556"}


id: GO:0036292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which interchain hydrogen bonds between two single-stranded DNA (ssDNA) are reformed to regenerate double-stranded DNA (dsDNA). ssDNA is often bound and stabilized by proteins such as replication protein A (RPA) to form ssDNA bubbles. The bubbles can be rewound by ATP-dependent motors to reform base pairs between strands and thus dsDNA.","definition_xrefs":["PMID:22759634","PMID:22705370","PMID:21078962","PMID:22704558"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA rewinding (obsolete GO:0036292)","synonyms":[{"name":"DNA annealing","type":"related"},{"name":"RPA-dependent DNA rewinding","type":"narrow"},{"name":"single-stranded DNA bubble rewinding","type":"narrow"}],"termid":"GO:0036292"}


id: GO:1905328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a septum over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","PMID:4562349","GOC:tb","GO_REF:0000080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant septum development","synonyms":[{"name":"dissepiment development","type":"broad"}],"termid":"GO:1905328"}


id: GO:0047467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (E)-4-hydroxyphenylacetaldehyde oxime = (Z)-4-hydroxyphenylacetaldehyde oxime.","definition_xrefs":["EC:5.2.1.11","MetaCyc:5.2.1.11-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxyphenylacetaldehyde-oxime isomerase activity (obsolete GO:0047467)","termid":"GO:0047467"}


id: PBO:0041096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and WD repeat domain containing 1 pseudogene 1","termid":"PBO:0041096"}


id: MONDO:0008316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary thrombophilia due to congenital protein C deficiency","termid":"MONDO:0019145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia due to protein C deficiency, autosomal dominant","secondary_identifiers":["UMLS:C2674321","MEDGEN:436138","GARD:18574","DOID:0111909","OMIM:176860"],"synonyms":[{"name":"Proc deficiency, autosomal dominant","type":"related"},{"name":"Protein C deficiency, acquired","type":"related"},{"name":"Protein C deficiency, autosomal dominant","type":"related"},{"name":"THPH3","type":"related"},{"name":"thrombophilia 3 due to protein C deficiency, autosomal dominant","type":"exact"},{"name":"thrombophilia due to PROTEIN C deficiency, autosomal dominant","type":"related"},{"name":"thrombophilia due to protein C deficiency, autosomal dominant","type":"exact"}],"termid":"MONDO:0008316","xrefs":{"Monarch":{"xref_id":"0008316"}}}


id: GO:1900992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving (-)-secologanin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00328"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secologanin metabolic process (obsolete GO:1900992)","synonyms":[{"name":"(-)-secologanin metabolism","type":"exact"}],"termid":"GO:1900992"}


id: GO:0022626
data:
  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ribosome located in the cytosol.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome","termid":"GO:0005840"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":142,"genes_by_uniquename":{"SJAG_00034":null,"SJAG_00069":null,"SJAG_00155":null,"SJAG_00166":null,"SJAG_00220":null,"SJAG_00384":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00503":null,"SJAG_00523":null,"SJAG_00537":null,"SJAG_00541":null,"SJAG_00544":null,"SJAG_00629":null,"SJAG_00726":null,"SJAG_00733":null,"SJAG_00748":null,"SJAG_00749":null,"SJAG_00765":null,"SJAG_00921":null,"SJAG_00940":null,"SJAG_01087":null,"SJAG_01128":null,"SJAG_01132":null,"SJAG_01194":null,"SJAG_01202":null,"SJAG_01226":null,"SJAG_01287":null,"SJAG_01296":null,"SJAG_01322":null,"SJAG_01364":null,"SJAG_01365":null,"SJAG_01366":null,"SJAG_01387":null,"SJAG_01411":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01551":null,"SJAG_01565":null,"SJAG_01568":null,"SJAG_01580":null,"SJAG_01588":null,"SJAG_01606":null,"SJAG_01608":null,"SJAG_01609":null,"SJAG_01632":null,"SJAG_01676":null,"SJAG_01721":null,"SJAG_01853":null,"SJAG_02020":null,"SJAG_02046":null,"SJAG_02081":null,"SJAG_02121":null,"SJAG_02184":null,"SJAG_02207":null,"SJAG_02224":null,"SJAG_02243":null,"SJAG_02253":null,"SJAG_02280":null,"SJAG_02283":null,"SJAG_02312":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02510":null,"SJAG_02522":null,"SJAG_02531":null,"SJAG_02535":null,"SJAG_02546":null,"SJAG_02585":null,"SJAG_02597":null,"SJAG_02611":null,"SJAG_02682":null,"SJAG_02749":null,"SJAG_02755":null,"SJAG_02802":null,"SJAG_02803":null,"SJAG_02840":null,"SJAG_02861":null,"SJAG_02870":null,"SJAG_02871":null,"SJAG_02890":null,"SJAG_02891":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03034":null,"SJAG_03043":null,"SJAG_03122":null,"SJAG_03127":null,"SJAG_03133":null,"SJAG_03159":null,"SJAG_03197":null,"SJAG_03254":null,"SJAG_03262":null,"SJAG_03326":null,"SJAG_03335":null,"SJAG_03364":null,"SJAG_03383":null,"SJAG_03422":null,"SJAG_03423":null,"SJAG_03424":null,"SJAG_03425":null,"SJAG_03568":null,"SJAG_03666":null,"SJAG_03762":null,"SJAG_03859":null,"SJAG_03919":null,"SJAG_03922":null,"SJAG_03971":null,"SJAG_04020":null,"SJAG_04029":null,"SJAG_04066":null,"SJAG_04160":null,"SJAG_04168":null,"SJAG_04174":null,"SJAG_04176":null,"SJAG_04188":null,"SJAG_04204":null,"SJAG_04256":null,"SJAG_04304":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04414":null,"SJAG_04475":null,"SJAG_04476":null,"SJAG_04478":null,"SJAG_04534":null,"SJAG_04626":null,"SJAG_04663":null,"SJAG_04672":null,"SJAG_04695":null,"SJAG_04746":null,"SJAG_04814":null,"SJAG_04847":null,"SJAG_04897":null,"SJAG_04998":null,"SJAG_05216":null,"SJAG_05248":null,"SJAG_06612":null,"SJAG_07013":null,"SJAG_07014":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"cytosolic ribosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0009281","GO:0030871","GO:0005830"],"synonyms":[{"name":"70S ribosome","type":"narrow"},{"name":"80S ribosome","type":"narrow"}],"termid":"GO:0022626","terms_by_termid":{"GO:0022625":null,"GO:0022626":null,"GO:0022627":null}}


id: GO:0019257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-nitrotoluene, 1-methyl-4-nitrobenzene. It is a light yellow liquid with a weak aromatic odor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrotoluene metabolic process","termid":"GO:0019326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"4-nitrotoluene metabolic process","synonyms":[{"name":"4-nitrotoluene metabolism","type":"exact"},{"name":"4NT metabolic process","type":"exact"},{"name":"4NT metabolism","type":"exact"}],"termid":"GO:0019257"}


id: GO:1901795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-(3-hydroxyphenyl)propanoate.","definition_xrefs":["PMID:10537203","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"3-(3-hydroxyphenyl)propanoate metabolic process","termid":"GO:1901793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propanoate biosynthetic process","synonyms":[{"name":"3-(3-hydroxyphenyl)propanoate anabolism","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate biosynthesis","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate formation","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate synthesis","type":"exact"}],"termid":"GO:1901795"}


id: GO:0034513
data:
  {"annotated_genes":["SJAG_01234","SJAG_00083","SJAG_00566","SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74253,89775,95114,100922],"is_not":false,"summary":null,"term":"GO:0034513"}]},"cv_name":"molecular_function","definition":"Binding to a box H/ACA small nucleolar RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA binding","termid":"GO:0030515"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"box H/ACA snoRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034513","terms_by_termid":{"GO:0034513":null}}


id: MONDO:0010961
data:
  {"annotated_genes":["SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84979],"is_not":false,"summary":null,"term":"MONDO:0010961"}]},"cv_name":"mondo","definition":"Prohormone convertase-I deficiency is the rarest form of monogenic obesity. The disorder is characterized by severe childhood obesity, hypoadrenalism, reactive hypoglycaemia, and elevated circulating levels of certain prohormones.","definition_xrefs":["Orphanet:71528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"inherited obesity","termid":"MONDO:0019182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"obesity due to prohormone convertase I deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16689","NORD:109523","UMLS:C1833053","DOID:0111698","MEDGEN:318777","OMIM:600955","MESH:C563423","SCTID:722053001"],"synonyms":[{"name":"PCI deficiency","type":"exact"},{"name":"PCSK1 Deficiency","type":"exact"},{"name":"obesity and endocrinopathy due to impaired processing of prohormones","type":"related"},{"name":"obesity with impaired prohormone processing","type":"exact"},{"name":"proprotein convertase 1/3 deficiency","type":"related"}],"termid":"MONDO:0010961","terms_by_termid":{"MONDO:0010961":null},"xrefs":{"Monarch":{"xref_id":"0010961"}}}


id: GO:0090735
data:
  {"annotated_genes":["SJAG_02708","SJAG_01410","SJAG_03221","SJAG_04530","SJAG_02079","SJAG_00757","SJAG_01708","SJAG_02267"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65409,64764,74856,72050,75529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[78326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[107416,110053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA repair complex.","definition_xrefs":["PMID:27233470","GOC:pg","PMID:27113759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"DNA repair complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090735","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null}}


id: MONDO:0015601
data:
  {"annotated_genes":["SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85689],"is_not":false,"summary":null,"term":"MONDO:0015601"}]},"cv_name":"mondo","definition":"X-linked intellectual deficit, Van Esch type is characterized by mild to moderate intellectual deficit associated with low birth weight, short stature, microcephaly and variable hypergonadotropic hypogonadism.","definition_xrefs":["Orphanet:163976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05239":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, van Esch type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17008","MEDGEN:930741","SCTID:718914002","OMIM:301030","UMLS:C4305072","DOID:0111840"],"synonyms":[{"name":"VEODS","type":"exact"},{"name":"Van Esch-O'Driscoll syndrome","type":"exact"},{"name":"Van Esch-O'Driscoll syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation, X-Linked, syndromic, Van Esch-O'Driscoll type","type":"exact"}],"termid":"MONDO:0015601","terms_by_termid":{"MONDO:0015601":null},"xrefs":{"Monarch":{"xref_id":"0015601"}}}


id: GO:0046427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the JAK-STAT signaling pathway activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046425"},{"relation_name":"is_a","term_name":"positive regulation of receptor signaling pathway via STAT","termid":"GO:1904894"},{"relation_name":"positively_regulates","term_name":"cell surface receptor signaling pathway via JAK-STAT","termid":"GO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor signaling pathway via JAK-STAT","secondary_identifiers":["Reactome:R-HSA-8849474","GO:2000366"],"synonyms":[{"name":"activation of JAK-STAT cascade","type":"narrow"},{"name":"positive regulation of STAT protein import into nucleus","type":"narrow"},{"name":"positive regulation of STAT protein nuclear translocation","type":"narrow"},{"name":"stimulation of JAK-STAT cascade","type":"narrow"},{"name":"up regulation of JAK-STAT cascade","type":"exact"},{"name":"up-regulation of JAK-STAT cascade","type":"exact"},{"name":"upregulation of JAK-STAT cascade","type":"exact"}],"termid":"GO:0046427"}


id: PBO:0059599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 11","termid":"PBO:0059599"}


id: MONDO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, severe form of scabies that is associated with immunosuppression. It is characterized by an immense number of mites and hyperkeratotic crusted lesions, and is usually accompanied by lymphadenopathy and eosinophilia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scabies","termid":"MONDO:0004525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Norwegian scabies","secondary_identifiers":["SCTID:128870005","UMLS:C0028425","NCIT:C34855","DOID:14374","MEDGEN:14409"],"synonyms":[{"name":"crusted scabies","type":"exact"},{"name":"seven year itch","type":"related"}],"termid":"MONDO:0001951","xrefs":{"Monarch":{"xref_id":"0001951"}}}


id: PBO:0015227
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(2), RING domain-dependent","termid":"PBO:0015227"}


id: GO:0090665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing at least one glycosylated protein, may be held together by both covalent and noncovalent bonds.","definition_xrefs":["GOC:pf","PMID:8662961","PMID:7693675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glycoprotein complex","termid":"GO:0090665"}


id: PBO:0081897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 848, pseudogene","termid":"PBO:0081897"}


id: GO:0046106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thymine, 5-methyluracil, one of the two major pyrimidine bases present (as thymidine) in DNA but not found in RNA other than (as ribothymidine) in transfer RNA, where it is a minor base.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"thymine metabolic process","termid":"GO:0019859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"thymine biosynthetic process","synonyms":[{"name":"thymine anabolism","type":"exact"},{"name":"thymine biosynthesis","type":"exact"},{"name":"thymine formation","type":"exact"},{"name":"thymine synthesis","type":"exact"}],"termid":"GO:0046106"}


id: MONDO:1012048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar cortical atrophy, non-human animal","termid":"MONDO:1011836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, sheep","secondary_identifiers":["OMIA:000177-9940"],"termid":"MONDO:1012048","xrefs":{"Monarch":{"xref_id":"1012048"}}}


id: GO:0086066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between an atrial cardiomyocyte and its surroundings that contributes to the process of the atrial cardiomyocyte communicating with an AV node cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell to AV node cell communication","synonyms":[{"name":"atrial cardiomyocyte to AV node cell communication","type":"exact"},{"name":"atrial cardiomyocyte to atrioventricular node cell communication","type":"exact"}],"termid":"GO:0086066"}


id: GO:0006475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to a non-terminal amino acid in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal protein amino acid acetylation","termid":"GO:0006475"}


id: MONDO:0002776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the external ear.","direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"},{"relation_name":"is_a","term_name":"disorder of ear","termid":"MONDO:0021205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external ear disorder","secondary_identifiers":["MEDGEN:57606","ICD9:380.9","ICD9:744.47","SCTID:49130001","ICD9:380","UMLS:C0155388","EFO:0009668","NCIT:C26972","ICD10CM:H60-H62","DOID:379"],"synonyms":[{"name":"disease of external ear","type":"exact"},{"name":"disease or disorder of external ear","type":"exact"},{"name":"disorder of external ear","type":"exact"},{"name":"external ear disease","type":"exact"},{"name":"external ear disease or disorder","type":"exact"},{"name":"external ear disorder","type":"exact"},{"name":"preauricular cyst","type":"related"},{"name":"preauricular cyst (disorder)","type":"related"},{"name":"preauricular sinus and fistula","type":"exact"},{"name":"preauricular sinus and fistula (disorder)","type":"related"},{"name":"preauricular sinus or fistula","type":"related"},{"name":"preauricular sinus or fistula NOS (disorder)","type":"related"}],"termid":"MONDO:0002776","xrefs":{"Monarch":{"xref_id":"0002776"}}}


id: MONDO:0012922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hypertrophic pyloric stenosis","termid":"MONDO:0100239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis, infantile hypertrophic, 5","secondary_identifiers":["MESH:C567283","UMLS:C2675862","OMIM:612525","MEDGEN:390899"],"synonyms":[{"name":"IHPS5","type":"exact"},{"name":"infantile hypertrophic pyloric stenosis type 5","type":"exact"},{"name":"pyloric stenosis, infantile hypertrophic, 5","type":"exact"}],"termid":"MONDO:0012922","xrefs":{"Monarch":{"xref_id":"0012922"}}}


id: GO:0019658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose to lactate and acetate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P124-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"glucose catabolic process to lactate","termid":"GO:0019659"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glucose fermentation to lactate and acetate","synonyms":[{"name":"bifidum pathway","type":"exact"},{"name":"glucose catabolic process to lactate and acetate","type":"broad"}],"termid":"GO:0019658"}


id: GO:0098759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-8 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-8","termid":"GO:0098758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-8","synonyms":[{"name":"cellular response to IL-8","type":"exact"}],"termid":"GO:0098759"}


id: PBO:0000358
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.2.3","termid":"PBO:0000358"}


id: PBO:0027707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_polymerase_processivity_factor_activity","termid":"PBO:0027707"}


id: PBO:0064510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J2","termid":"PBO:0064510"}


id: PBO:0047975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member B, pseudogene","termid":"PBO:0047975"}


id: GO:0005760
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63135],"is_not":false,"summary":null,"term":"GO:0005760"}]},"cv_name":"cellular_component","definition":"A DNA polymerase complex consisting of a large subunit, responsible for the catalytic activities, and a small accessory subunit. Functions in the replication and repair of mitochondrial DNA.","definition_xrefs":["GOC:jl","PMID:12045093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase complex","termid":"GO:0042575"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"gamma DNA polymerase complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0005760","terms_by_termid":{"GO:0005760":null}}


id: GO:0046512
data:
  {"annotated_genes":["SJAG_02305","SJAG_02429","SJAG_02706","SJAG_00880","SJAG_01057","SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73517,76656,78689,96660,105749,109463],"is_not":false,"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues.","definition_xrefs":["GOC:ma","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingosine metabolic process","termid":"GO:0006670"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"sphingoid biosynthetic process","termid":"GO:0046520"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingosine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sphingosine anabolism","type":"exact"},{"name":"sphingosine biosynthesis","type":"exact"},{"name":"sphingosine formation","type":"exact"},{"name":"sphingosine synthesis","type":"exact"}],"termid":"GO:0046512","terms_by_termid":{"GO:0046512":null}}


id: PBO:0039863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP26 antisense RNA 1","termid":"PBO:0039863"}


id: PBO:0116737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem cell derived angiogenic lncRNA","termid":"PBO:0116737"}


id: PBO:0028724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cell_tip","termid":"PBO:0028724"}


id: PBO:0042506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 26","termid":"PBO:0042506"}


id: PR:P28040
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase alpha catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01433","PANTHER:PTHR10322:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.06c","secondary_identifiers":["UniProtKB:P28040"],"synonyms":[{"name":"DNA polymerase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLA1","type":"exact"}],"termid":"PR:P28040"}


id: MONDO:0015721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild hemophilia A is a form of hemophilia A characterized by a small deficiency of factor VIII leading to abnormal bleeding as a result of minor injuries, or following surgery or tooth extraction.","definition_xrefs":["Orphanet:169808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A","termid":"MONDO:0010602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"mild hemophilia A","secondary_identifiers":["GARD:17061","MEDGEN:543975","SCTID:26029002","UMLS:C0272324"],"synonyms":[{"name":"mild factor VIII deficiency","type":"exact"},{"name":"mild haemophilia type A","type":"exact"},{"name":"mild hemophilia type A","type":"exact"}],"termid":"MONDO:0015721","xrefs":{"Monarch":{"xref_id":"0015721"}}}


id: GO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle phase during which nuclear division occurs, and which is comprises the phases: prophase, metaphase, anaphase and telophase and occurs as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M phase","termid":"GO:0000279"},{"relation_name":"is_a","term_name":"mitotic cell cycle phase","termid":"GO:0098763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitotic M phase","secondary_identifiers":["Reactome:R-HSA-68886"],"synonyms":[{"name":"M phase of mitotic cell cycle","type":"exact"},{"name":"M-phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000087"}


id: FYPO:0003202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction is not spatially and temporally coupled to division septum assembly as in wild type. The edges of the growing septum and the plasma membrane do not remain in contact, and septum assembly may be slower than ring contraction.","definition_xrefs":["PomBase:mah","PMID:24165938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000032","FYPO:0004803","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"actomyosin contractile ring contraction uncoupled from septum assembly","synonyms":[{"name":"actomyosin contractile ring contraction uncoupled from septum assembly during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring contraction uncoupled from septum assembly during vegetative growth","type":"exact"},{"name":"cytokinetic contractile ring contraction uncoupled from septum assembly","type":"exact"}],"termid":"FYPO:0003202"}


id: PBO:0086016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to cytosol; conserved among Saccharomyces sensu stricto species","termid":"PBO:0086016"}


id: PBO:0050819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 4","termid":"PBO:0050819"}


id: PBO:0091862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4504 family protein, human C1orf74 ortholog","termid":"PBO:0091862"}


id: GO:0032078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endodeoxyribonuclease activity","termid":"GO:0032071"},{"relation_name":"is_a","term_name":"negative regulation of deoxyribonuclease activity","termid":"GO:0032076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of endodeoxyribonuclease activity","synonyms":[{"name":"down regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of endodeoxyribonuclease activity","type":"exact"},{"name":"endodeoxyribonuclease inhibitor","type":"related"},{"name":"inhibition of endodeoxyribonuclease activity","type":"narrow"}],"termid":"GO:0032078"}


id: PBO:0052108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNAB1 antisense RNA 2","termid":"PBO:0052108"}


id: PBO:0055169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2593","termid":"PBO:0055169"}


id: MONDO:0016216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult hepatocellular carcinoma is the most common primary liver cancer of adulthood. Derived from well-differentiated hepatocytes, it often develops from chronic liver cirrhosis which is most often due to hepatitis B and C virus or alcohol abuse. Symptoms are hepatic mass, abdominal pain and, in advanced stages, jaundice, cachexia and liver failure.","definition_xrefs":["Orphanet:210159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"adult hepatocellular carcinoma","secondary_identifiers":["DOID:0070328","MEDGEN:124633","NCIT:C7956","UMLS:C0279607","GARD:6608"],"synonyms":[{"name":"adult HCC","type":"exact"},{"name":"adult hepatocellular carcinoma","type":"exact"},{"name":"adult hepatoma","type":"exact"},{"name":"adult primary carcinoma of liver cell","type":"exact"},{"name":"adult primary carcinoma of the liver cell","type":"exact"},{"name":"adult primary hepatocellular carcinoma","type":"exact"},{"name":"adult primary hepatoma","type":"exact"},{"name":"adult primary liver cell carcinoma","type":"exact"},{"name":"hepatocellular cancer","type":"broad"},{"name":"hepatocellular carcinoma of adults","type":"exact"}],"termid":"MONDO:0016216","xrefs":{"Monarch":{"xref_id":"0016216"}}}


id: PBO:0067903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 205","termid":"PBO:0067903"}


id: FYPO:0007818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:34147496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination","termid":"FYPO:0007946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein ubiquitination during nitrogen starvation","synonyms":[{"name":"decreased protein ubiquitination during nitrogen depletion","type":"exact"},{"name":"decreased protein ubiquitination during nitrogen deprivation","type":"exact"},{"name":"decreased protein ubiquitinylation during nitrogen starvation","type":"exact"},{"name":"decreased protein ubiquitylation during nitrogen starvation","type":"exact"},{"name":"reduced protein ubiquitination during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007818"}


id: MONDO:0007265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cardiofaciocutaneous syndrome in which the cause of the disease is a mutation in the BRAF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiofaciocutaneous syndrome","termid":"MONDO:0015280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005267"],"is_obsolete":false,"name":"cardiofaciocutaneous syndrome 1","secondary_identifiers":["DOID:0111460","OMIM:115150"],"synonyms":[{"name":"BRAF cardiofaciocutaneous syndrome","type":"exact"},{"name":"CFC syndrome","type":"related"},{"name":"CFC1","type":"related"},{"name":"Cfcs","type":"related"},{"name":"cardiofaciocutaneous syndrome","type":"broad"},{"name":"cardiofaciocutaneous syndrome 1","type":"exact"},{"name":"cardiofaciocutaneous syndrome caused by mutation in BRAF","type":"exact"},{"name":"cardiofaciocutaneous syndrome type 1","type":"exact"}],"termid":"MONDO:0007265","xrefs":{"Monarch":{"xref_id":"0007265"}}}


id: GO:1901324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichodermin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trichodermin","termid":"GO:1901324"}


id: PBO:0050880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 3","termid":"PBO:0050880"}


id: PBO:0057323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519c","termid":"PBO:0057323"}


id: PBO:0057662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1255a","termid":"PBO:0057662"}


id: PBO:0059904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 27","termid":"PBO:0059904"}


id: PBO:0080101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP11 small subunit processome component","termid":"PBO:0080101"}


id: PBO:0091374
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of RAs","termid":"PBO:0091374"}


id: GO:0031293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic cleavage of a transmembrane protein leading to the release of an intracellular domain.","definition_xrefs":["PMID:12808018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein proteolysis","termid":"GO:0033619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane protein intracellular domain proteolysis","secondary_identifiers":["Reactome:R-HSA-193692"],"synonyms":[{"name":"membrane protein solubilization","type":"related"}],"termid":"GO:0031293"}


id: PBO:0040499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A pseudogene 1","termid":"PBO:0040499"}


id: PBO:0072888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding kinase family member 3","termid":"PBO:0072888"}


id: MOD:00403
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to homoserine.","definition_xrefs":["Unimod:10#M","DeltaMass:113","OMSSA:56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine","synonyms":[{"name":"Homoserine","type":"related"},{"name":"Homoserine formed from Met by CNBr treatment","type":"exact"},{"name":"Met->Hse","type":"related"},{"name":"ctermpephsem","type":"exact"}],"termid":"MOD:00403"}


id: PR:Q9USY8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USY8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16H5.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.15","synonyms":[{"name":"Spom972h-SPBC16H5.15","type":"exact"}],"termid":"PR:Q9USY8"}


id: MOD:00903
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-asparagine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-asparagine residue","synonyms":[{"name":"ModAsn","type":"exact"}],"termid":"MOD:00903"}


id: PATO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"temperature","termid":"PATO:0000146"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased temperature","secondary_identifiers":["PATO:0000677"],"synonyms":[{"name":"cold","type":"exact"},{"name":"low temperature","type":"exact"}],"termid":"PATO:0001306"}


id: RO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is a transport process or transporter activity and the outcome of this p is to move c from one location to another.","direct_ancestors":[{"relation_name":"is_a","term_name":"transports_or_maintains_localization_of","termid":"RO:0002313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transports","termid":"RO:0002020"}


id: PBO:0047654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase family member 6 (inactive)","termid":"PBO:0047654"}


id: GO:0044065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of respiratory gaseous exchange","termid":"GO:0043576"},{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"respiratory system process","termid":"GO:0003016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory system process","termid":"GO:0044065"}


id: PBO:0030691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0030691"}


id: GO:1902207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-2-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:11909529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-2-mediated signaling pathway","termid":"GO:1902205"},{"relation_name":"positively_regulates","term_name":"interleukin-2-mediated signaling pathway","termid":"GO:0038110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-2-mediated signaling pathway","synonyms":[{"name":"activation of IL-2-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-2-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-2-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:1902207"}


id: FYPO:0003920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased replication fork arrest at mating-type locus","synonyms":[{"name":"increased replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0003920"}


id: PBO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-to-5' phosphorolytic exoribonuclease Rrp41 (predicted)","termid":"PBO:0001910"}


id: GO:0042883
data:
  {"annotated_genes":["SJAG_04295"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"}]},"cv_name":"biological_process","definition":"The directed movement of cysteine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transport","termid":"GO:0000101"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cysteine transport","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"L-cysteine transport","type":"narrow"}],"termid":"GO:0042883","terms_by_termid":{"GO:1903712":null}}


id: PBO:0047405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 43","termid":"PBO:0047405"}


id: PR:O74736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- png2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein png2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.11c","synonyms":[{"name":"ING1 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-png2","type":"exact"}],"termid":"PR:O74736"}


id: PBO:0046994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member E","termid":"PBO:0046994"}


id: GO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage within Internal Transcribed Spacer 1 (ITS1) upstream of the 5.8S rRNA derived from an originally tricistronic rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. In S. cerevisiae, this endonucleolytic cleavage within ITS1 initiates the maturation of the LSU and the 5.8S rRNAs.","definition_xrefs":["GOC:krc","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","synonyms":[{"name":"endonucleolytic cleavage at A3","type":"narrow"}],"termid":"GO:0000464"}


id: MONDO:1012261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stringhalt, non-human animal","termid":"MONDO:1011631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stringhalt, horse","secondary_identifiers":["OMIA:000950-9796"],"termid":"MONDO:1012261","xrefs":{"Monarch":{"xref_id":"1012261"}}}


id: MONDO:0019771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oromandibular dystonia (OMD) is a form of focal dystonia, affecting the lower part of the face and jaws. It is characterized by sustained or repetitive involuntary jaw and tongue movements and facial grimacing caused by involuntary spasms of the masticatory, facial, pharyngeal, lingual, and lip muscles.","definition_xrefs":["Orphanet:93958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"},{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"oromandibular dystonia","secondary_identifiers":["UMLS:C2242577","icd11.foundation:749381409","MEDGEN:473560","GARD:19243","DOID:0050843"],"termid":"MONDO:0019771","xrefs":{"Monarch":{"xref_id":"0019771"}}}


id: GO:1903561
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any vesicle that is part of the extracellular region.","definition_xrefs":["GOC:pm","PMID:24769233","GO_REF:0000064","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle","termid":"GO:0031982"},{"relation_name":"is_a","term_name":"extracellular membrane-bounded organelle","termid":"GO:0065010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular vesicle","synonyms":[{"name":"microparticle","type":"related"}],"termid":"GO:1903561"}


id: GO:0000076
data:
  {"annotated_genes":["SJAG_03927","SJAG_02074","SJAG_02563","SJAG_01605","SJAG_04671","SJAG_00364","SJAG_02266","SJAG_03695","SJAG_01010","SJAG_03026","SJAG_01076","SJAG_02098","SJAG_03160","SJAG_04287","SJAG_01205","SJAG_01044","SJAG_02771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115801,91193,106372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[109068,116544,117018,100296,78625,79199,99119,70875,111781,106375,116845,91194,93725,98952,115803,74570,72017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a DNA replication checkpoint, that prevents the initiation of nuclear division until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome.","definition_xrefs":["PMID:11728327","GOC:curators","PMID:12537518","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_04287":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072437"],"synonyms":[{"name":"DNA replication checkpoint","type":"exact"},{"name":"signal transduction involved in DNA replication checkpoint","type":"exact"}],"termid":"GO:0000076","terms_by_termid":{"GO:0033314":null,"GO:0033315":null}}


id: PATO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's forming a bundle of aligned anatomical fibers, as of muscle or nerve.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciculation","termid":"PATO:0002013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculated","synonyms":[{"name":"fascicled","type":"exact"}],"termid":"PATO:0001861"}


id: PBO:0086973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of protein phosphatase 1 (Glc7p); involved in glycogen metabolism and chromosome segregation; proposed to regulate Glc7p activity via conformational alteration; ortholog of the mammalian protein phosphatase inhibitor 2; protein abundance increases in response to DNA replication stress","termid":"PBO:0086973"}


id: MONDO:0060457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammation with arthritis and dyskeratosis","secondary_identifiers":["OMIM:617388","UMLS:C4479278","MEDGEN:1380109"],"synonyms":[{"name":"AIADK","type":"related"},{"name":"AUTOINFLAMMATION with arthritis and dyskeratosis","type":"related"}],"termid":"MONDO:0060457","xrefs":{"Monarch":{"xref_id":"0060457"}}}


id: PBO:0060589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neighbor of BRCA1 lncRNA 2","termid":"PBO:0060589"}


id: PBO:0016064
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Response Regulator","termid":"PBO:0016064"}


id: PBO:0079784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A5","termid":"PBO:0079784"}


id: FYPO:0006025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments does not occur. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished actin filament binding","synonyms":[{"name":"abolished F-actin binding","type":"exact"},{"name":"abolished filamentous actin binding","type":"exact"},{"name":"actin filament binding abolished","type":"exact"}],"termid":"FYPO:0006025"}


id: GO:0019363
data:
  {"annotated_genes":["SJAG_01500","SJAG_01582","SJAG_03298","SJAG_00957","SJAG_02889","SJAG_04467","SJAG_03946","SJAG_04693","SJAG_01566","SJAG_02618"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[74415,112832,77261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[79910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[77712,79636,70863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[88779,90415,109366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:vw","GOC:jl","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"pyridine nucleotide metabolic process","termid":"GO:0019362"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04467":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyridine nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleotide anabolism","type":"exact"},{"name":"pyridine nucleotide biosynthesis","type":"exact"},{"name":"pyridine nucleotide formation","type":"exact"},{"name":"pyridine nucleotide synthesis","type":"exact"}],"termid":"GO:0019363","terms_by_termid":{"GO:0006741":null,"GO:0009435":null,"GO:0019358":null,"GO:0034355":null,"GO:0034356":null}}


id: FYPO:0007479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the assembly and stable inheritance of heterochromatic structure is normal (i.e. indistinguishable from wild type) in regions of the genome where heterochromatin is normally maintained over successive generations.","definition_xrefs":["PMID:31278118","PomBase:mah","PMID:29899117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"normal epigenetic heterochromatin inheritance","synonyms":[{"name":"normal PEV","type":"related"},{"name":"normal epigenetic heterochromatin propagation","type":"exact"},{"name":"normal epigenetic inheritance of heterochromatin","type":"exact"}],"termid":"FYPO:0007479"}


id: GO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the mesonephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in mesonephric nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in mesonephric nephron morphogenesis","type":"exact"}],"termid":"GO:0061295"}


id: GO:0140534
data:
  {"annotated_genes":["SJAG_01999","SJAG_06383","SJAG_02437","SJAG_03261","SJAG_01006","SJAG_01069","SJAG_02330","SJAG_01349","SJAG_00846","SJAG_01750","SJAG_03930","SJAG_01240","SJAG_03535","SJAG_01051","SJAG_04384","SJAG_05414","SJAG_04821","SJAG_01940","SJAG_01166","SJAG_02913","SJAG_03841","SJAG_03292","SJAG_05274","SJAG_00959","SJAG_03672","SJAG_02208","SJAG_01558","SJAG_02065","SJAG_01929","SJAG_01178","SJAG_02776","SJAG_04451","SJAG_02588","SJAG_01223","SJAG_01127","SJAG_05278","SJAG_04294","SJAG_01389","SJAG_03416","SJAG_03066","SJAG_01305","SJAG_00175","SJAG_00360","SJAG_04881","SJAG_02914","SJAG_04370","SJAG_02867","SJAG_00277","SJAG_01134","SJAG_03333","SJAG_01709","SJAG_03345","SJAG_04956","SJAG_02875","SJAG_06425","SJAG_05348","SJAG_04090","SJAG_03311","SJAG_03280","SJAG_00790","SJAG_03115","SJAG_00064","SJAG_02804","SJAG_02354","SJAG_03801","SJAG_04119","SJAG_00295","SJAG_04127","SJAG_03955","SJAG_00924","SJAG_03710","SJAG_03737"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76402,99777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070939"},{"annotations":[78207,76771,79972,91429,71957,100947,74525,75278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072546"},{"annotations":[70502,78332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034663"},{"annotations":[109896,74809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[69661,79898,69747,116353,74455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032865"},{"annotations":[72476,74831,113869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043529"},{"annotations":[78205,76552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017177"},{"annotations":[77297,115875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990529"},{"annotations":[89311,90987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120097"},{"annotations":[58342,92760,77291,70630,92851,108338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000506"},{"annotations":[74317,74307,70400,75051,70672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042765"},{"annotations":[105058,89014,109315,103721,116896,104573,107425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"},{"annotations":[102320,99787,78964,62920,75166,74145,78562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008250"},{"annotations":[91007,108153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160005"},{"annotations":[63679,105928,97802,109086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005784"},{"annotations":[90346,95491,69694,72967],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031207"},{"annotations":[67744,61744,65470,73662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005787"},{"annotations":[68704,94038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005785"},{"annotations":[108062,97803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071261"},{"annotations":[74795,98095,103322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043541"},{"annotations":[70414,75308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"A protein complex that is part of an endoplasmic reticulum.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"endoplasmic 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reticulum protein-containing complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140534","terms_by_termid":{"GO:0000506":null,"GO:0000836":null,"GO:0005784":null,"GO:0005785":null,"GO:0005787":null,"GO:0008250":null,"GO:0017177":null,"GO:0031207":null,"GO:0031211":null,"GO:0032865":null,"GO:0034098":null,"GO:0034663":null,"GO:0042765":null,"GO:0043529":null,"GO:0043541":null,"GO:0070939":null,"GO:0071261":null,"GO:0072546":null,"GO:0120097":null,"GO:0160005":null,"GO:1990529":null}}


id: GO:0010344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a seed oilbody. Seed oilbodies are simple organelles comprising a matrix of triglyceride surrounded by a phospholipid monolayer embedded and covered with unique proteins called oleosins. Seed oilbodies supply the energy requirements for the growth of the seedling after germination.","definition_xrefs":["PMID:16877495","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"seed oilbody biogenesis","synonyms":[{"name":"oleosome biogenesis","type":"related"},{"name":"seed oil body organization","type":"exact"},{"name":"spherosome biogenesis","type":"related"}],"termid":"GO:0010344"}


id: PBO:0109360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase","termid":"PBO:0109360"}


id: PBO:0068698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 79, pseudogene","termid":"PBO:0068698"}


id: PBO:0054311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1703","termid":"PBO:0054311"}


id: PR:Q12381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing factor 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03357","PRO:DNx","PANTHER:PTHR11246:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor prp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.07","secondary_identifiers":["UniProtKB:Q12381"],"synonyms":[{"name":"Spom972h-PRPF6","type":"exact"}],"termid":"PR:Q12381"}


id: MONDO:1010686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"},{"relation_name":"is_a","term_name":"cardiomyopathy, dog","termid":"MONDO:1010441"},{"relation_name":"is_a","term_name":"amyloidosis, dog","termid":"MONDO:1011467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, dog","secondary_identifiers":["OMIA:000038-9615"],"termid":"MONDO:1010686","xrefs":{"Monarch":{"xref_id":"1010686"}}}


id: PBO:0061040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 1","termid":"PBO:0061040"}


id: PBO:0090161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I,II and III complex subunit Trs20","termid":"PBO:0090161"}


id: GO:0015787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of UDP-glucuronic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-glucuronic acid is a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"UDP-glucuronate transmembrane transport","synonyms":[{"name":"UDP-glucuronic acid transmembrane transport","type":"exact"},{"name":"UDP-glucuronic acid transport","type":"related"}],"termid":"GO:0015787"}


id: PBO:0056758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 13, eEF1A lysine and N-terminal methyltransferase","termid":"PBO:0056758"}


id: MONDO:0011301
data:
  {"annotated_genes":["SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84784],"is_not":false,"summary":null,"term":"MONDO:0011301"}]},"cv_name":"mondo","definition":"Pseudohypoparathyroidism type 1B (PHP-1b) is a type of pseudohypoparathyroidism (PHP) characterized by localized resistance to parathyroid hormone (PTH) mainly in the renal tissues which manifests with hypocalcemia, hyperphosphatemia and elevated PTH levels. About 60-70% of patients also present with elevated TSH levels due to TSH resistance.","definition_xrefs":["Orphanet:94089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoparathyroidism","termid":"MONDO:0019992"},{"relation_name":"is_a","term_name":"disorder of GNAS inactivation","termid":"MONDO:0800466"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"pseudohypoparathyroidism type 1B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:440485628","GARD:10680","MEDGEN:350343","OMIM:603233","DOID:0080222","MESH:C548075","NANDO:1201076","UMLS:C1864100"],"synonyms":[{"name":"PHP1B","type":"related"},{"name":"Php 1B","type":"related"},{"name":"pseudohypoparathyroidism Ib","type":"exact"},{"name":"pseudohypoparathyroidism type IB","type":"related"},{"name":"pseudohypoparathyroidism, type 1B","type":"related"},{"name":"pseudohypoparathyroidism, type IB","type":"related"}],"termid":"MONDO:0011301","terms_by_termid":{"MONDO:0011301":null},"xrefs":{"Monarch":{"xref_id":"0011301"}}}


id: GO:0100066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates induction of conjugation with cellular fusion.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of induction of conjugation with cellular fusion by transcription from RNA polymerase II promoter (obsolete GO:0100066)","termid":"GO:0100066"}


id: MONDO:0003335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyneuropathy that is persistent or long-standing in nature.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"chronic polyneuropathy","secondary_identifiers":["UMLS:C1167650","DOID:5221","MEDGEN:223911","NCIT:C36071"],"synonyms":[{"name":"polyneuropathy, chronic","type":"exact"}],"termid":"MONDO:0003335","xrefs":{"Monarch":{"xref_id":"0003335"}}}


id: GO:1902912
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of pyruvate kinase activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","GOC:TermGenie","PMID:24606918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyruvate kinase complex","termid":"GO:1902912"}


id: GO:1904437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transferrin receptor binding.","definition_xrefs":["GOC:BHF","GOC:kom","GO_REF:0000059","GOC:TermGenie","PMID:18353247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor binding","termid":"GO:1900122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transferrin receptor binding","synonyms":[{"name":"activation of transferrin receptor binding","type":"narrow"},{"name":"up regulation of transferrin receptor binding","type":"exact"},{"name":"up-regulation of transferrin receptor binding","type":"exact"},{"name":"upregulation of transferrin receptor binding","type":"exact"}],"termid":"GO:1904437"}


id: PBO:0005687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral inner nuclear membrane protein Ima1","termid":"PBO:0005687"}


id: PBO:0001100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jmjC domain","termid":"PBO:0001100"}


id: GO:0004573
data:
  {"annotated_genes":["SJAG_04363"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78749],"is_not":false,"summary":null,"term":"GO:0004573"}]},"cv_name":"molecular_function","definition":"Catalysis of the exohydrolysis of the non-reducing terminal glucose residue in the mannosyl-oligosaccharide Glc(3)Man(9)GlcNAc(2).","definition_xrefs":["EC:3.2.1.106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"Glc3Man9GlcNAc2 oligosaccharide glucosidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.2.1.106-RXN","Reactome:R-HSA-4793947","Reactome:R-HSA-532678","Reactome:R-HSA-9694364","RHEA:55988"],"synonyms":[{"name":"mannosyl-oligosaccharide glucohydrolase activity","type":"related"},{"name":"mannosyl-oligosaccharide glucosidase (processing A-glucosidase I) activity","type":"exact"},{"name":"mannosyl-oligosaccharide glucosidase activity","type":"related"},{"name":"processing A-glucosidase I activity","type":"related"},{"name":"trimming glucosidase I","type":"exact"}],"termid":"GO:0004573","terms_by_termid":{"GO:0004573":null}}


id: MONDO:0007417
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86462],"is_not":false,"summary":null,"term":"MONDO:0007417"}]},"cv_name":"mondo","definition":"Darier disease (DD) is a keratinization disorder characterized by the development of keratotic papules in seborrheic areas and specific nail anomalies.","definition_xrefs":["Orphanet:218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Darier disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10023369","MEDGEN:5956","UMLS:C0022595","NCIT:C84665","Wikipedia:Darier%27s_disease","DOID:2734","MESH:D007644","OMIM:124200","SCTID:48611009","ICD9:757.39","NORD:1329","icd11.foundation:643994486","GARD:6243"],"synonyms":[{"name":"DAR","type":"related"},{"name":"Darier White disease","type":"related"},{"name":"Darier disease","type":"exact"},{"name":"Darier disease, acral hemorrhagic type","type":"related"},{"name":"Darier disease, segmental","type":"related"},{"name":"Darier's disease","type":"exact"},{"name":"Darier-White disease","type":"exact"},{"name":"Keratosis Follicularis","type":"exact"},{"name":"dar","type":"related"},{"name":"keratosis follicularis","type":"exact"}],"termid":"MONDO:0007417","terms_by_termid":{"MONDO:0007417":null},"xrefs":{"Monarch":{"xref_id":"0007417"}}}


id: PBO:0027940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_glucose_starvation","termid":"PBO:0027940"}


id: GO:0034069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + aminoglycoside = CoA + N-acetylaminoglycoside.","definition_xrefs":["GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"aminoglycoside N-acetyltransferase activity","synonyms":[{"name":"kanamycin acetyltransferase activity","type":"narrow"}],"termid":"GO:0034069"}


id: PBO:0034787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex beta subunit Apl1 (predicted)","termid":"PBO:0034787"}


id: GO:0140512
data:
  {"annotated_genes":["SJAG_03729","SJAG_04284","SJAG_03200","SJAG_04578","SJAG_04148","SJAG_01745","SJAG_01374","SJAG_01584"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115780,95877,90706,116154,110172,110206,89887,91095],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140599"}]},"cv_name":"cellular_component","definition":"The central region of a mitotic nuclear bridge, distal to the main portions of the daughter nuclei.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic nuclear bridge","termid":"GO:0140510"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_01584":null,"SJAG_01745":null,"SJAG_03200":null,"SJAG_03729":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic nuclear bridge midzone","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140512","terms_by_termid":{"GO:0140599":null}}


id: PBO:0040875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP2 inducible kinase","termid":"PBO:0040875"}


id: PBO:0036000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_medial_cortical_node_condensation","termid":"PBO:0036000"}


id: PBO:0113350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for mRNA m6A methylation and meiosis; subunit of the m6A methyltransferase (MIS) complex; required for the stability of MIS complex subunits and consistent with a scaffolding function; non-essential gene required for pre-meiotic S-phase; may be required to initiate the meiotic program, for progression through meiotic divisions and for spore formation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; homolog of VIRMA/virilizer/VIR","termid":"PBO:0113350"}


id: GO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of dividing the cytoplasm of a parent cell where a structure forms in the cytoplasm and grows until reaching the plasma membrane, thereby completely separating the cytoplasms of adjacent progeny cells. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cytokinesis by cell plate formation","termid":"GO:0000911"}


id: PBO:0086196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that activates Rub1p (NEDD8) before neddylation; acts together with Ula1p; may play a role in protein degradation; GFP-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0086196"}


id: PBO:0073915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 5","termid":"PBO:0073915"}


id: PBO:0047293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2","termid":"PBO:0047293"}


id: GO:2000086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:2000084"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"positive regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000086"}


id: GO:1903753
data:
  {"annotated_genes":["SJAG_03185","SJAG_02013","SJAG_02000","SJAG_03893","SJAG_04825","SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91426,94793,95728,99203,116820,118058],"is_not":false,"summary":null,"term":"GO:1903753"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of p38MAPK cascade.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18681888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of p38MAPK cascade","termid":"GO:1900744"},{"relation_name":"negatively_regulates","term_name":"p38MAPK cascade","termid":"GO:0038066"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02000":null,"SJAG_02013":null,"SJAG_03185":null,"SJAG_03893":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of p38MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of p38 MAPK cascade","type":"exact"},{"name":"down regulation of p38 cascade","type":"exact"},{"name":"down regulation of p38MAPK cascade","type":"exact"},{"name":"down-regulation of p38 MAPK cascade","type":"exact"},{"name":"down-regulation of p38 cascade","type":"exact"},{"name":"down-regulation of p38MAPK cascade","type":"exact"},{"name":"downregulation of p38 MAPK cascade","type":"exact"},{"name":"downregulation of p38 cascade","type":"exact"},{"name":"downregulation of p38MAPK cascade","type":"exact"},{"name":"inhibition of p38 MAPK cascade","type":"narrow"},{"name":"inhibition of p38 cascade","type":"narrow"},{"name":"inhibition of p38MAPK cascade","type":"narrow"},{"name":"negative regulation of osmosensory signaling MAPK cascade","type":"narrow"},{"name":"negative regulation of p38 MAPK cascade","type":"exact"},{"name":"negative regulation of p38 cascade","type":"exact"}],"termid":"GO:1903753","terms_by_termid":{"GO:1903753":null}}


id: PBO:0033751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_intergenic_meiotic_recombination","termid":"PBO:0033751"}


id: GO:0060596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the mammary placode forms. The mammary placode is a transient lens shaped structure that will give rise to the mammary bud proper.","definition_xrefs":["PMID:16168142","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"mammary gland formation","termid":"GO:0060592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary placode formation","termid":"GO:0060596"}


id: PBO:0003166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2, PAF family homolog","termid":"PBO:0003166"}


id: GO:0043203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of the neuronal cell soma from which the axon originates.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon hillock","secondary_identifiers":["NIF_Subcellular:sao627227260","Wikipedia:Axon_hillock"],"termid":"GO:0043203"}


id: GO:0102485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dATP + 2 H2O = dAMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dATP phosphohydrolase activity (obsolete GO:0102485)","termid":"GO:0102485"}


id: GO:0140058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a neuron projection are generated and organized into branches. A neuron projection is any process extending from a neural cell, such as axons or dendrites.","definition_xrefs":["PMID:23270857","GOC:bc","PMID:17114044","PMID:23764288","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection arborization","synonyms":[{"name":"branching morphogenesis of a neurite","type":"related"},{"name":"branching morphogenesis of a neuron projection","type":"related"},{"name":"neurite arborization","type":"exact"},{"name":"neurite branching","type":"exact"},{"name":"neuron projection branching","type":"exact"}],"termid":"GO:0140058"}


id: PBO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial myopathy","termid":"PBO:0003309"}


id: PBO:0091535
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding affinity for ADP-bound F-actin Kd 900 nM","termid":"PBO:0091535"}


id: GO:0080044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 7-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"quercetin 7-O-glucosyltransferase activity","termid":"GO:0080044"}


id: GO:0120100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane complex embedded in the cytoplasmic membrane which is the motor force, or torque, generator of the bacterial-type flagellum. The motor consists of a membrane-anchored rotor complex surrounded by one or more stator complexes in the cytoplasmic membrane. The stator consists of a hetero-hexameric complex of 2 membrane proteins, A and B, with stoichiometry A4B2. Examples are the H+ driven MotA-MotB stator complex of Escherichia coli and Salmonella enterica, and the Na+ driven PomA-PomB stator complex of Vibrio and Shewanella species. The rotor complex consists of a membrane-anchored ring and the motor switch complex, which controls the direction of flagellar rotation.","definition_xrefs":["PMID:10572114","PMID:12624192","GOC:cilia","PMID:24697492","PMID:25251856","DOI:10.1002/9780470015902.a0000744.pub4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body","termid":"GO:0009425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum motor","termid":"GO:0120100"}


id: FYPO:0005726
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which deactivation of the mitotic spindle assembly checkpoint does not occur. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:vw","PMID:21664573","PomBase:mah","PMID:19592249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abolished deactivation of mitotic spindle assembly checkpoint","synonyms":[{"name":"abolished deactivation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"abolished mitotic spindle assembly checkpoint deactivation","type":"exact"},{"name":"abolished mitotic spindle assembly checkpoint silencing","type":"exact"},{"name":"deactivation of mitotic spindle assembly checkpoint abolished","type":"exact"}],"termid":"FYPO:0005726"}


id: PBO:0091076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III synthase Ups","termid":"PBO:0091076"}


id: PBO:0068653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 34, pseudogene","termid":"PBO:0068653"}


id: PR:P78773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acetyl-coenzyme A synthetase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04788","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-coenzyme A synthetase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.02c","secondary_identifiers":["UniProtKB:P78773"],"synonyms":[{"name":"Spom972h-ACSS2","type":"exact"},{"name":"acetate--CoA ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"acyl-activating enzyme (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78773"}


id: GO:0106289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of deadenylation-dependent decapping of nuclear-transcribed mRNA.","definition_xrefs":["PMID:32354837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0106288"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"negatively_regulates","term_name":"deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0000290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0106289"}


id: PBO:0081668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 589","termid":"PBO:0081668"}


id: GO:0106410
data:
  {"annotated_genes":["SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101921],"is_not":false,"summary":null,"term":"GO:0106410"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of a box C/D RNA molecule.","definition_xrefs":["PMID:34352089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box C/D sno(s)RNA processing","termid":"GO:0034963"},{"relation_name":"is_a","term_name":"snoRNA 2,2,7-trimethylguanosine (TMG) capping","termid":"GO:0180031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"box C/D sno(s)RNA 5'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106410","terms_by_termid":{"GO:0106410":null}}


id: PR:Q96WV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An androgen-induced gene 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0641 membrane protein PJ4664.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.05","secondary_identifiers":["UniProtKB:Q96WV4"],"synonyms":[{"name":"Spom972h-AIG1","type":"exact"}],"termid":"PR:Q96WV4"}


id: MOD:00474
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(1,1,2-(2)H3)-propanamide-L-cysteine.","definition_xrefs":["Unimod:97#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-carboxamidoethyl-L-cysteine","termid":"MOD:00417"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-([1,1,2-(2)H3]-carboxamidoethyl)-L-cysteine","synonyms":[{"name":"Acrylamide d3","type":"related"},{"name":"Propionamide:2H(3)","type":"related"},{"name":"S-([1,1,2-(2)H3]-3-amino-3-oxopropyl)cysteine","type":"exact"},{"name":"S-([1,1,2-(2)H3]-carbamoylethyl)-L-cysteine","type":"exact"},{"name":"S-([1,1,2-(2)H3]-propanamide)-L-cysteine","type":"exact"}],"termid":"MOD:00474"}


id: GO:0019172
data:
  {"annotated_genes":["SJAG_04404","SJAG_02988","SJAG_02106","SJAG_04674"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59074,60857,72520,74249],"is_not":false,"summary":null,"term":"GO:0019172"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: methylglyoxal + H2O = D-lactate.","definition_xrefs":["PMID:7848303","RHEA:27754","GOC:mcc","PMID:21696459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02106":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"glyoxalase III activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLYOXIII-RXN","EC:4.2.1.130"],"synonyms":[{"name":"(R)-lactate hydro-lyase","type":"exact"},{"name":"D-lactate dehydratase","type":"exact"},{"name":"glutathione-independent glyoxalase activity","type":"related"}],"termid":"GO:0019172","terms_by_termid":{"GO:0019172":null}}


id: GO:0008817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + 2 corrinoid + reduced [electron-transfer flavoprotein] = 2 adenosylcorrinoid + 3 H+ + oxidized [electron-transfer flavoprotein] + 2 triphosphate. The corrinoid can be cob(II)yrinate a,c diamide, cob(II)inamide or cob(II)alamin.","definition_xrefs":["PMID:5946606","PMID:19933577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"corrinoid adenosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-3322125","KEGG_REACTION:R05218","EC:2.5.1.17","Reactome:R-HSA-3159253","GO:0043784"],"synonyms":[{"name":"ATP:cob(I)alamin Co-beta-adenosyltransferase activity","type":"narrow"},{"name":"ATP:cob(I)alamin cobeta-adenosyltransferase activity","type":"related"},{"name":"ATP:cob(I)yrinic acid-a,c-diamide cobeta-adenosyltransferase activity","type":"narrow"},{"name":"ATP:corrinoid adenosyltransferase activity","type":"related"},{"name":"aquacob(I)alamin adenosyltransferase activity","type":"narrow"},{"name":"aquocob(I)alamin vitamin B12s adenosyltransferase activity","type":"narrow"},{"name":"cob(I)alamin adenosyltransferase activity","type":"narrow"},{"name":"cob(I)yrinic acid a,c-diamide adenosyltransferase activity","type":"narrow"},{"name":"cob(II)yrinic acid a,c-diamide reductase activity","type":"narrow"},{"name":"cob(II)yrinic acid-a,c-diamide:FMN oxidoreductase activity","type":"narrow"},{"name":"vitamin B12s adenosyltransferase activity","type":"related"}],"termid":"GO:0008817"}


id: PBO:0033808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_telomere_during_vegetative_growth","termid":"PBO:0033808"}


id: MONDO:0013725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary nonpolyposis colon cancer in which the cause of the disease is a mutation in the MLH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Lynch syndrome","termid":"MONDO:0005835"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colorectal cancer, hereditary nonpolyposis, type 7","secondary_identifiers":["DOID:0070276","OMIM:614385","GARD:15799","MESH:C565777","MEDGEN:346893","UMLS:C1858380"],"synonyms":[{"name":"HNPCC7","type":"related"},{"name":"MLH3 hereditary nonpolyposis colon cancer","type":"exact"},{"name":"colorectal cancer, hereditary nonpolyposis, type 7","type":"exact"},{"name":"hereditary nonpolyposis colon cancer caused by mutation in MLH3","type":"exact"}],"termid":"MONDO:0013725","xrefs":{"Monarch":{"xref_id":"0013725"}}}


id: FYPO:0000679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects a developmental process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process phenotype","termid":"FYPO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental process phenotype","synonyms":[{"name":"fission yeast developmental process phenotype","type":"exact"}],"termid":"FYPO:0000679"}


id: PBO:0071577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 6","termid":"PBO:0071577"}


id: PR:Q9C0X6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RuvB-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02044","PANTHER:PTHR11093:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RuvB-like helicase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.09","secondary_identifiers":["UniProtKB:Q9C0X6"],"synonyms":[{"name":"Spom972h-RUVBL1","type":"exact"}],"termid":"PR:Q9C0X6"}


