# genes

id: SJAG_03390
data:
  {"cv_annotations":{},"dbxrefs":["UniProtKB/TrEMBL:B6K439","EnsemblGenomes-Tr:EEB08246","EnsemblGenomes-Gn:SJAG_03390"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":139,"start":37}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"wis4","uniquename":"SJAG_03384"},{"name":"gid4","uniquename":"SJAG_03385"},{"name":"ppk13","uniquename":"SJAG_03386"},{"name":"snt2","uniquename":"SJAG_03387"},{"name":"hsr1","uniquename":"SJAG_03388"},{"uniquename":"SJAG_03390"},{"name":"orc3","uniquename":"SJAG_05301"},{"name":"sdd3","uniquename":"SJAG_03393"},{"name":"mug151","uniquename":"SJAG_03394"},{"name":"mdm31","uniquename":"SJAG_03395"},{"name":"ste24","uniquename":"SJAG_03396"}],"genes_by_uniquename":{"SJAG_03390":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":139,"start":37}],"match_end":139,"match_start":37,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":47,"start":37},{"end":139,"start":130}],"match_end":139,"match_start":37,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1007002,"start_pos":1006583,"strand":"reverse"},"product":"dubious","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_03390.1"],"transcripts_by_uniquename":{"SJAG_03390.1":null},"uniprot_identifier":"B6K439","uniquename":"SJAG_03390"}


id: SJAG_03393
data:
  {"coiled_coil_coords":[{"range":{"end":472,"start":452}}],"cv_annotations":{"biological_process":[{"annotations":[97082],"is_not":false,"summary":null,"term":"GO:0035694"}],"cellular_component":[{"annotations":[97081],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[65820],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[97084],"is_not":false,"summary":null,"term":"GO:0004222"}],"mondo":[{"annotations":[86099],"is_not":false,"summary":null,"term":"MONDO:0030318"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K441","EnsemblGenomes-Tr:EEB08248","GOA:B6K441","EnsemblGenomes-Gn:SJAG_03393","InterPro:IPR007863","InterPro:IPR011249","InterPro:IPR011765"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppk13","uniquename":"SJAG_03386"},{"name":"snt2","uniquename":"SJAG_03387"},{"name":"hsr1","uniquename":"SJAG_03388"},{"uniquename":"SJAG_03390"},{"name":"orc3","uniquename":"SJAG_05301"},{"name":"sdd3","uniquename":"SJAG_03393"},{"name":"mug151","uniquename":"SJAG_03394"},{"name":"mdm31","uniquename":"SJAG_03395"},{"name":"ste24","uniquename":"SJAG_03396"},{"uniquename":"SJAG_03398"},{"uniquename":"SJAG_03399"}],"genes_by_uniquename":{"HGNC:17663":null,"SJAG_03393":null,"SPAC3H1.02c":null,"YOL098C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Insulinase (Peptidase family M16)","id":"PF00675","interpro_description":"Peptidase M16, N-terminal","interpro_id":"IPR011765","interpro_name":"Pept_M16_N","locations":[{"end":152,"start":46}],"match_end":152,"match_start":46,"name":"Peptidase_M16"},{"dbname":"PFAM","description":"Peptidase M16 inactive domain","id":"PF05193","interpro_description":"Peptidase M16, C-terminal","interpro_id":"IPR007863","interpro_name":"Peptidase_M16_C","locations":[{"end":364,"start":186}],"match_end":364,"match_start":186,"name":"Peptidase_M16_C"},{"dbname":"FUNFAM","description":"Putative zinc metalloprotease","id":"G3DSA:3.30.830.10:FF:000015","locations":[{"end":228,"start":2}],"match_end":228,"match_start":2},{"dbname":"FUNFAM","description":"Putative zinc metalloprotease","id":"G3DSA:3.30.830.10:FF:000031","locations":[{"end":469,"start":246}],"match_end":469,"match_start":246},{"dbname":"SUPERFAMILY","id":"SSF63411","interpro_description":"Metalloenzyme, LuxS/M16 peptidase-like","interpro_id":"IPR011249","interpro_name":"Metalloenz_LuxS/M16","locations":[{"end":229,"start":13},{"end":503,"start":254},{"end":783,"start":561},{"end":998,"start":807}],"match_end":998,"match_start":13,"name":"LuxS/MPP-like metallohydrolase"},{"dbname":"GENE3D","id":"G3DSA:3.30.830.10","locations":[{"end":231,"start":3},{"end":472,"start":245},{"end":1000,"start":559}],"match_end":1000,"match_start":3},{"dbname":"PANTHER","id":"PTHR43016","locations":[{"end":995,"start":13}],"match_end":995,"match_start":13,"name":"PRESEQUENCE PROTEASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":472,"start":452}],"match_end":472,"match_start":452,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":1013455,"start_pos":1010369,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":470,"start":459}},{"range":{"end":749,"start":734}}],"name":"sdd3","ortholog_annotations":[{"gene_uniquename":"SJAG_03393","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17663","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03393","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H1.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03393","ortholog_taxonid":4932,"ortholog_uniquename":"YOL098C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial matrix protease Sdd3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0046872"],"not-binding":["GO:0004222"]}},"subset_termids":["MONDO:0005559","MONDO:0006025","GO:0005739","GO:0030163","GO:0140096","GO:0008233","GO:0007005"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004222":null,"GO:0005759":null,"GO:0035694":null,"GO:0046872":null,"MONDO:0030318":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03393.1"],"transcripts_by_uniquename":{"SJAG_03393.1":null},"uniprot_identifier":"B6K441","uniquename":"SJAG_03393"}


id: SJAG_03394
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97085],"is_not":false,"summary":null,"term":"GO:0045814"}]},"dbxrefs":["GOA:B6K442","EnsemblGenomes-Gn:SJAG_03394","InterPro:IPR012479","EnsemblGenomes-Tr:EEB08249","UniProtKB/TrEMBL:B6K442"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":41,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"snt2","uniquename":"SJAG_03387"},{"name":"hsr1","uniquename":"SJAG_03388"},{"uniquename":"SJAG_03390"},{"name":"orc3","uniquename":"SJAG_05301"},{"name":"sdd3","uniquename":"SJAG_03393"},{"name":"mug151","uniquename":"SJAG_03394"},{"name":"mdm31","uniquename":"SJAG_03395"},{"name":"ste24","uniquename":"SJAG_03396"},{"uniquename":"SJAG_03398"},{"uniquename":"SJAG_03399"},{"name":"avt3","uniquename":"SJAG_03400"}],"genes_by_uniquename":{"HGNC:30785":null,"SJAG_03394":null,"SPAC3H1.03":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"HCNGP-like protein","id":"PF07818","interpro_description":"SAP30-binding protein","interpro_id":"IPR012479","interpro_name":"SAP30BP","locations":[{"end":130,"start":37}],"match_end":130,"match_start":37,"name":"HCNGP"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":41,"start":1}],"match_end":41,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":33,"start":21}],"match_end":33,"match_start":21,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1014314,"start_pos":1013886,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":25,"start":10}}],"name":"mug151","ortholog_annotations":[{"gene_uniquename":"SJAG_03394","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30785","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03394","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H1.03","reference_uniquename":"PMID:21511999"}],"product":"SAP30 binding protein ortholog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0006325"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0045814":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03394.1"],"transcripts_by_uniquename":{"SJAG_03394.1":null},"uniprot_identifier":"B6K442","uniquename":"SJAG_03394"}


id: SJAG_03395
data:
  {"cv_annotations":{"biological_process":[{"annotations":[79876],"is_not":false,"summary":null,"term":"GO:0007005"}],"cellular_component":[{"annotations":[79875],"is_not":false,"summary":null,"term":"GO:0005743"}]},"dbxrefs":["GOA:B6K443","EnsemblGenomes-Gn:SJAG_03395","InterPro:IPR012571","UniProtKB/TrEMBL:B6K443","EnsemblGenomes-Tr:EEB08250"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hsr1","uniquename":"SJAG_03388"},{"uniquename":"SJAG_03390"},{"name":"orc3","uniquename":"SJAG_05301"},{"name":"sdd3","uniquename":"SJAG_03393"},{"name":"mug151","uniquename":"SJAG_03394"},{"name":"mdm31","uniquename":"SJAG_03395"},{"name":"ste24","uniquename":"SJAG_03396"},{"uniquename":"SJAG_03398"},{"uniquename":"SJAG_03399"},{"name":"avt3","uniquename":"SJAG_03400"},{"name":"vhc1","uniquename":"SJAG_03401"}],"genes_by_uniquename":{"SJAG_03395":null,"SPAC3H1.04c":null,"YHR194W":null,"YOR147W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Yeast mitochondrial distribution and morphology (MDM) proteins","id":"PF08118","interpro_description":"Mitochondrial distribution and morphology protein family 31/32, fungi","interpro_id":"IPR012571","interpro_name":"Mdm31/Mdm32","locations":[{"end":582,"start":99}],"match_end":582,"match_start":99,"name":"MDM31_MDM32"},{"dbname":"PANTHER","id":"PTHR31068","interpro_description":"Mitochondrial distribution and morphology protein family 31/32, fungi","interpro_id":"IPR012571","interpro_name":"Mdm31/Mdm32","locations":[{"end":585,"start":83}],"match_end":585,"match_start":83,"name":"MITOCHONDRIAL DISTRIBUTION AND MORPHOLOGY PROTEIN 31"}],"location":{"chromosome_name":"supercont5.2","end_pos":1016297,"start_pos":1014391,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":564,"start":551}}],"name":"mdm31","ortholog_annotations":[{"gene_uniquename":"SJAG_03395","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H1.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03395","ortholog_taxonid":4932,"ortholog_uniquename":"YHR194W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03395","ortholog_taxonid":4932,"ortholog_uniquename":"YHR194W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03395","ortholog_taxonid":4932,"ortholog_uniquename":"YOR147W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial inner membrane protein Mdm31, mitochondrion inheritance factor, interacts with ERMES","references_by_uniquename":{"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005739","GO:0007005"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0007005":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":145,"start":123}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03395.1"],"transcripts_by_uniquename":{"SJAG_03395.1":null},"uniprot_identifier":"B6K443","uniquename":"SJAG_03395"}


id: SJAG_03396
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":303,"start":303}},{"assigned_by":"UniProtKB","range":{"end":385,"start":385}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":302,"start":302}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":306,"start":306}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":381,"start":381}}],"cv_annotations":{"biological_process":[{"annotations":[74598],"is_not":false,"summary":null,"term":"GO:0071586"},{"annotations":[97092],"is_not":false,"summary":null,"term":"GO:0031204"}],"cellular_component":[{"annotations":[74596],"is_not":false,"summary":null,"term":"GO:0005789"}],"molecular_function":[{"annotations":[62808],"is_not":false,"summary":null,"term":"GO:0046872"},{"annotations":[74597],"is_not":false,"summary":null,"term":"GO:0004222"}],"mondo":[{"annotations":[86416],"is_not":false,"summary":null,"term":"MONDO:0012074"},{"annotations":[87024],"is_not":false,"summary":null,"term":"MONDO:0800042"}]},"dbxrefs":["GOA:B6K444","InterPro:IPR027057","InterPro:IPR032456","EnsemblGenomes-Gn:SJAG_03396","EnsemblGenomes-Tr:EEB08251","InterPro:IPR001915","UniProtKB/TrEMBL:B6K444"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03390"},{"name":"orc3","uniquename":"SJAG_05301"},{"name":"sdd3","uniquename":"SJAG_03393"},{"name":"mug151","uniquename":"SJAG_03394"},{"name":"mdm31","uniquename":"SJAG_03395"},{"name":"ste24","uniquename":"SJAG_03396"},{"uniquename":"SJAG_03398"},{"uniquename":"SJAG_03399"},{"name":"avt3","uniquename":"SJAG_03400"},{"name":"vhc1","uniquename":"SJAG_03401"},{"name":"mhr1","uniquename":"SJAG_03402"}],"genes_by_uniquename":{"HGNC:12877":null,"SJAG_03396":null,"SPAC3H1.05":null,"YJR117W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Peptidase family M48","id":"PF01435","interpro_description":"Peptidase M48","interpro_id":"IPR001915","interpro_name":"Peptidase_M48","locations":[{"end":435,"start":234}],"match_end":435,"match_start":234,"name":"Peptidase_M48"},{"dbname":"PFAM","description":"CAAX prenyl protease N-terminal, five membrane helices","id":"PF16491","interpro_description":"CAAX prenyl protease 1, N-terminal","interpro_id":"IPR032456","interpro_name":"Peptidase_M48_N","locations":[{"end":229,"start":40}],"match_end":229,"match_start":40,"name":"Peptidase_M48_N"},{"dbname":"CDD","description":"M48A_Zmpste24p_like","id":"cd07343","interpro_description":"CAAX prenyl protease 1","interpro_id":"IPR027057","interpro_name":"CAXX_Prtase_1","locations":[{"end":437,"start":21}],"match_end":437,"match_start":21,"name":"M48A_Zmpste24p_like"},{"dbname":"FUNFAM","description":"CAAX prenyl protease","id":"G3DSA:3.30.2010.10:FF:000002","locations":[{"end":310,"start":228}],"match_end":310,"match_start":228},{"dbname":"GENE3D","id":"G3DSA:3.30.2010.10","locations":[{"end":309,"start":228}],"match_end":309,"match_start":228,"name":"Metalloproteases (\"zincins\"), catalytic domain"},{"dbname":"PANTHER","id":"PTHR10120","locations":[{"end":439,"start":14}],"match_end":439,"match_start":14,"name":"CAAX PRENYL PROTEASE 1"}],"location":{"chromosome_name":"supercont5.2","end_pos":1018288,"start_pos":1016906,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":90,"start":77}},{"range":{"end":195,"start":183}}],"name":"ste24","ortholog_annotations":[{"gene_uniquename":"SJAG_03396","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12877","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03396","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H1.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03396","ortholog_taxonid":4932,"ortholog_uniquename":"YJR117W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03396","ortholog_taxonid":4932,"ortholog_uniquename":"YJR117W","reference_uniquename":"PMID:26896847"}],"product":"ER membrane protease Ste24","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0046872"],"not-binding":["GO:0004222"]}},"subset_termids":["MONDO:0005093","GO:0005789","GO:0051604","GO:0055085","GO:0140096","GO:0005783","MONDO:0005066","GO:0006605","GO:0008233"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004222":null,"GO:0005789":null,"GO:0031204":null,"GO:0046872":null,"GO:0071586":null,"MONDO:0012074":null,"MONDO:0800042":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":32,"start":10}},{"assigned_by":"TMHMM","range":{"end":96,"start":74}},{"assigned_by":"TMHMM","range":{"end":153,"start":131}},{"assigned_by":"TMHMM","range":{"end":196,"start":174}},{"assigned_by":"TMHMM","range":{"end":223,"start":201}},{"assigned_by":"TMHMM","range":{"end":334,"start":317}},{"assigned_by":"TMHMM","range":{"end":371,"start":349}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03396.1"],"transcripts_by_uniquename":{"SJAG_03396.1":null},"uniprot_identifier":"B6K444","uniquename":"SJAG_03396"}


id: SJAG_03398
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70254],"is_not":false,"summary":null,"term":"GO:0019547"},{"annotations":[112949],"is_not":false,"summary":null,"term":"GO:0010121"},{"annotations":[57759],"is_not":false,"summary":null,"term":"GO:0000050"}],"cellular_component":[{"annotations":[70256],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[112947],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[70258],"is_not":false,"summary":null,"term":"GO:0004053"},{"annotations":[70257],"is_not":false,"summary":null,"term":"GO:0030145"}],"mondo":[{"annotations":[85480],"is_not":false,"summary":null,"term":"MONDO:0008814"}]},"dbxrefs":["GOA:B6K445","InterPro:IPR006035","EnsemblGenomes-Tr:EEB08252","InterPro:IPR014033","EnsemblGenomes-Gn:SJAG_03398","InterPro:IPR023696","InterPro:IPR020855","UniProtKB/TrEMBL:B6K445"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"orc3","uniquename":"SJAG_05301"},{"name":"sdd3","uniquename":"SJAG_03393"},{"name":"mug151","uniquename":"SJAG_03394"},{"name":"mdm31","uniquename":"SJAG_03395"},{"name":"ste24","uniquename":"SJAG_03396"},{"uniquename":"SJAG_03398"},{"uniquename":"SJAG_03399"},{"name":"avt3","uniquename":"SJAG_03400"},{"name":"vhc1","uniquename":"SJAG_03401"},{"name":"mhr1","uniquename":"SJAG_03402"},{"name":"vps38","uniquename":"SJAG_03403"}],"genes_by_uniquename":{"HGNC:663":null,"HGNC:664":null,"SJAG_03398":null,"SPAC3H1.07":null,"SPBP26C9.02c":null,"YPL111W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Arginase family","id":"PF00491","interpro_description":"Ureohydrolase","interpro_id":"IPR006035","interpro_name":"Ureohydrolase","locations":[{"end":309,"start":16}],"match_end":309,"match_start":16,"name":"Arginase"},{"dbname":"CDD","description":"Arginase","id":"cd09989","interpro_description":"Arginase","interpro_id":"IPR014033","interpro_name":"Arginase","locations":[{"end":309,"start":17}],"match_end":309,"match_start":17,"name":"Arginase"},{"dbname":"PROSITE_PATTERNS","description":"Arginase family signature.","id":"PS01053","interpro_description":"Ureohydrolase, manganese-binding site","interpro_id":"IPR020855","interpro_name":"Ureohydrolase_Mn_BS","locations":[{"end":259,"start":238}],"match_end":259,"match_start":238,"name":"ARGINASE_1"},{"dbname":"PROSITE_PROFILES","description":"Arginase family profile.","id":"PS51409","interpro_description":"Ureohydrolase","interpro_id":"IPR006035","interpro_name":"Ureohydrolase","locations":[{"end":316,"start":11}],"match_end":316,"match_start":11,"name":"ARGINASE_2"},{"dbname":"PRINTS","description":"Arginase signature","id":"PR00116","interpro_description":"Ureohydrolase","interpro_id":"IPR006035","interpro_name":"Ureohydrolase","locations":[{"end":123,"start":108},{"end":158,"start":131},{"end":203,"start":185},{"end":264,"start":235},{"end":284,"start":270}],"match_end":284,"match_start":108,"name":"ARGINASE"},{"dbname":"FUNFAM","description":"Arginase","id":"G3DSA:3.40.800.10:FF:000012","locations":[{"end":315,"start":14}],"match_end":315,"match_start":14},{"dbname":"SUPERFAMILY","id":"SSF52768","interpro_description":"Ureohydrolase domain superfamily","interpro_id":"IPR023696","interpro_name":"Ureohydrolase_dom_sf","locations":[{"end":313,"start":16}],"match_end":313,"match_start":16,"name":"Arginase/deacetylase"},{"dbname":"GENE3D","id":"G3DSA:3.40.800.10","locations":[{"end":316,"start":8}],"match_end":316,"match_start":8,"name":"Ureohydrolase domain"},{"dbname":"PANTHER","id":"PTHR43782","interpro_description":"Ureohydrolase","interpro_id":"IPR006035","interpro_name":"Ureohydrolase","locations":[{"end":315,"start":14}],"match_end":315,"match_start":14,"name":"ARGINASE"},{"dbname":"NCBIFAM","description":"arginase","id":"TIGR01229","interpro_description":"Arginase","interpro_id":"IPR014033","interpro_name":"Arginase","locations":[{"end":313,"start":19}],"match_end":313,"match_start":19,"name":"rocF_arginase"}],"location":{"chromosome_name":"supercont5.2","end_pos":1023041,"start_pos":1022091,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":246,"start":237}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03398","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:663","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03398","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:663","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03398","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:664","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03398","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:664","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03398","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H1.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03398","ortholog_taxonid":4896,"ortholog_uniquename":"SPBP26C9.02c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03398","ortholog_taxonid":4932,"ortholog_uniquename":"YPL111W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03398","ortholog_taxonid":4932,"ortholog_uniquename":"YPL111W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03398","ortholog_taxonid":4932,"ortholog_uniquename":"YPL111W","reference_uniquename":"PMID:26896847"}],"product":"arginase (predicted)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030145"],"not-binding":["GO:0004053"]}},"subset_termids":["GO:0006520","GO:0071941","GO:0016810","GO:0005634","MONDO:0004736","MONDO:0005066","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000050":null,"GO:0004053":null,"GO:0005634":null,"GO:0005829":null,"GO:0010121":null,"GO:0019547":null,"GO:0030145":null,"MONDO:0008814":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03398.1"],"transcripts_by_uniquename":{"SJAG_03398.1":null},"uniprot_identifier":"B6K445","uniquename":"SJAG_03398"}


id: SJAG_03399
data:
  {"coiled_coil_coords":[{"range":{"end":206,"start":179}}],"cv_annotations":{"biological_process":[{"annotations":[97108],"is_not":false,"summary":null,"term":"GO:0036444"},{"annotations":[97109],"is_not":false,"summary":null,"term":"GO:0033617"}],"cellular_component":[{"annotations":[97106],"is_not":false,"summary":null,"term":"GO:0005743"}]},"dbxrefs":["InterPro:IPR024461","EnsemblGenomes-Tr:EEB08253","EnsemblGenomes-Gn:SJAG_03399","UniProtKB/TrEMBL:B6K446"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sdd3","uniquename":"SJAG_03393"},{"name":"mug151","uniquename":"SJAG_03394"},{"name":"mdm31","uniquename":"SJAG_03395"},{"name":"ste24","uniquename":"SJAG_03396"},{"uniquename":"SJAG_03398"},{"uniquename":"SJAG_03399"},{"name":"avt3","uniquename":"SJAG_03400"},{"name":"vhc1","uniquename":"SJAG_03401"},{"name":"mhr1","uniquename":"SJAG_03402"},{"name":"vps38","uniquename":"SJAG_03403"},{"name":"any1","uniquename":"SJAG_03404"}],"genes_by_uniquename":{"HGNC:21097":null,"HGNC:28108":null,"SJAG_03399":null,"SPAC3H1.08c":null,"YFL046W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Coiled-coil domain-containing protein 90-like","id":"PF07798","interpro_description":"Coiled-coil domain-containing protein 90-like","interpro_id":"IPR024461","interpro_name":"CCDC90-like","locations":[{"end":204,"start":55}],"match_end":204,"match_start":55,"name":"CCDC90-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.5.340","locations":[{"end":145,"start":51}],"match_end":145,"match_start":51},{"dbname":"PANTHER","id":"PTHR14360","interpro_description":"Coiled-coil domain-containing protein 90-like","interpro_id":"IPR024461","interpro_name":"CCDC90-like","locations":[{"end":204,"start":55}],"match_end":204,"match_start":55,"name":"PROTEIN FMP32, MITOCHONDRIAL"},{"dbname":"COILS","id":"Coil","locations":[{"end":206,"start":179}],"match_end":206,"match_start":179,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":1023923,"start_pos":1023208,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03399","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21097","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03399","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28108","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03399","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H1.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03399","ortholog_taxonid":4932,"ortholog_uniquename":"YFL046W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial calcium uniporter regulator","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0065003","GO:0007005","GO:0055085","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0033617":null,"GO:0036444":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03399.1"],"transcripts_by_uniquename":{"SJAG_03399.1":null},"uniprot_identifier":"B6K446","uniquename":"SJAG_03399"}


id: SJAG_03400
data:
  {"cv_annotations":{"biological_process":[{"annotations":[63277],"is_not":false,"summary":null,"term":"GO:0006868"},{"annotations":[97112],"is_not":false,"summary":null,"term":"GO:1990818"},{"annotations":[63278],"is_not":false,"summary":null,"term":"GO:1903826"},{"annotations":[97113],"is_not":false,"summary":null,"term":"GO:0089708"},{"annotations":[97114],"is_not":false,"summary":null,"term":"GO:0089707"},{"annotations":[63276],"is_not":false,"summary":null,"term":"GO:0015828"}],"cellular_component":[{"annotations":[97110],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[97111],"is_not":false,"summary":null,"term":"GO:0000329"}],"molecular_function":[{"annotations":[97115],"is_not":false,"summary":null,"term":"GO:0061459"},{"annotations":[97116],"is_not":false,"summary":null,"term":"GO:0005290"},{"annotations":[97117],"is_not":false,"summary":null,"term":"GO:0015189"}],"mondo":[{"annotations":[86266],"is_not":false,"summary":null,"term":"MONDO:0007677"},{"annotations":[85998],"is_not":false,"summary":null,"term":"MONDO:0009448"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08254","InterPro:IPR013057","GOA:B6K447","UniProtKB/TrEMBL:B6K447","EnsemblGenomes-Gn:SJAG_03400"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":30,"start":1}},{"range":{"end":265,"start":224}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mug151","uniquename":"SJAG_03394"},{"name":"mdm31","uniquename":"SJAG_03395"},{"name":"ste24","uniquename":"SJAG_03396"},{"uniquename":"SJAG_03398"},{"uniquename":"SJAG_03399"},{"name":"avt3","uniquename":"SJAG_03400"},{"name":"vhc1","uniquename":"SJAG_03401"},{"name":"mhr1","uniquename":"SJAG_03402"},{"name":"vps38","uniquename":"SJAG_03403"},{"name":"any1","uniquename":"SJAG_03404"},{"name":"pib2","uniquename":"SJAG_03405"}],"genes_by_uniquename":{"HGNC:18762":null,"HGNC:19659":null,"HGNC:19660":null,"SJAG_03400":null,"SPAC3H1.09c":null,"YKL146W":null,"YNL101W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Transmembrane amino acid transporter protein","id":"PF01490","interpro_description":"Amino acid transporter, transmembrane domain","interpro_id":"IPR013057","interpro_name":"AA_transpt_TM","locations":[{"end":650,"start":270}],"match_end":650,"match_start":270,"name":"Aa_trans"},{"dbname":"PANTHER","id":"PTHR22950","locations":[{"end":641,"start":268}],"match_end":641,"match_start":268,"name":"AMINO ACID TRANSPORTER"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":30,"start":1},{"end":265,"start":224}],"match_end":265,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":240,"start":224}],"match_end":240,"match_start":224,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1026510,"start_pos":1024403,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":239,"start":222}},{"range":{"end":398,"start":387}},{"range":{"end":430,"start":419}}],"name":"avt3","ortholog_annotations":[{"gene_uniquename":"SJAG_03400","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18762","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03400","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19659","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03400","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:19660","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03400","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H1.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03400","ortholog_taxonid":4932,"ortholog_uniquename":"YKL146W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03400","ortholog_taxonid":4932,"ortholog_uniquename":"YNL101W","reference_uniquename":"PMID:29761456"}],"product":"vacuolar amino acid transmembrane transporter Avt3","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0061459","GO:0005290","GO:0015189"]}},"subset_termids":["MONDO:0005066","GO:0055085","GO:0022857","GO:0005773","GO:0005783","MONDO:0004736"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005290":null,"GO:0005783":null,"GO:0006868":null,"GO:0015189":null,"GO:0015828":null,"GO:0061459":null,"GO:0089707":null,"GO:0089708":null,"GO:1903826":null,"GO:1990818":null,"MONDO:0007677":null,"MONDO:0009448":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":323,"start":301}},{"assigned_by":"TMHMM","range":{"end":371,"start":349}},{"assigned_by":"TMHMM","range":{"end":405,"start":386}},{"assigned_by":"TMHMM","range":{"end":434,"start":412}},{"assigned_by":"TMHMM","range":{"end":473,"start":454}},{"assigned_by":"TMHMM","range":{"end":508,"start":486}},{"assigned_by":"TMHMM","range":{"end":552,"start":530}},{"assigned_by":"TMHMM","range":{"end":592,"start":573}},{"assigned_by":"TMHMM","range":{"end":619,"start":597}},{"assigned_by":"TMHMM","range":{"end":648,"start":626}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03400.1"],"transcripts_by_uniquename":{"SJAG_03400.1":null},"uniprot_identifier":"B6K447","uniquename":"SJAG_03400"}


id: SJAG_03401
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73271],"is_not":false,"summary":null,"term":"GO:0006884"},{"annotations":[73273],"is_not":false,"summary":null,"term":"GO:0055064"},{"annotations":[73272],"is_not":false,"summary":null,"term":"GO:1902476"},{"annotations":[73274],"is_not":false,"summary":null,"term":"GO:0055075"},{"annotations":[61207],"is_not":false,"summary":null,"term":"GO:0071805"},{"annotations":[73270],"is_not":false,"summary":null,"term":"GO:0034486"}],"cellular_component":[{"annotations":[73269],"is_not":false,"summary":null,"term":"GO:0005774"}],"molecular_function":[{"annotations":[73268],"is_not":false,"summary":null,"term":"GO:0015379"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K448","EnsemblGenomes-Tr:EEB08255","InterPro:IPR004841","EnsemblGenomes-Gn:SJAG_03401","GOA:B6K448","InterPro:IPR018491"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":894,"start":875}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mdm31","uniquename":"SJAG_03395"},{"name":"ste24","uniquename":"SJAG_03396"},{"uniquename":"SJAG_03398"},{"uniquename":"SJAG_03399"},{"name":"avt3","uniquename":"SJAG_03400"},{"name":"vhc1","uniquename":"SJAG_03401"},{"name":"mhr1","uniquename":"SJAG_03402"},{"name":"vps38","uniquename":"SJAG_03403"},{"name":"any1","uniquename":"SJAG_03404"},{"name":"pib2","uniquename":"SJAG_03405"},{"name":"vma11","uniquename":"SJAG_03406"}],"genes_by_uniquename":{"HGNC:17435":null,"SJAG_03401":null,"SPBC18H10.16":null,"YBR235W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Solute carrier family 12","id":"PF03522","interpro_description":"SLC12A transporter, C-terminal","interpro_id":"IPR018491","interpro_name":"SLC12_C","locations":[{"end":659,"start":577}],"match_end":659,"match_start":577,"name":"SLC12"},{"dbname":"PFAM","description":"Amino acid permease","id":"PF00324","interpro_description":"Amino acid permease/ SLC12A domain","interpro_id":"IPR004841","interpro_name":"AA-permease/SLC12A_dom","locations":[{"end":561,"start":87}],"match_end":561,"match_start":87,"name":"AA_permease"},{"dbname":"FUNFAM","description":"Solute carrier family 12 member","id":"G3DSA:1.20.1740.10:FF:000013","locations":[{"end":528,"start":76}],"match_end":528,"match_start":76},{"dbname":"GENE3D","id":"G3DSA:1.20.1740.10","locations":[{"end":526,"start":76}],"match_end":526,"match_start":76,"name":"Amino acid/polyamine transporter I"},{"dbname":"PANTHER","id":"PTHR11827","interpro_description":"SLC12A transporter family","interpro_id":"IPR004842","interpro_name":"SLC12A_fam","locations":[{"end":1059,"start":69}],"match_end":1059,"match_start":69,"name":"SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":894,"start":875}],"match_end":894,"match_start":875,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":893,"start":882}],"match_end":893,"match_start":882,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1030334,"start_pos":1027107,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":223,"start":206}},{"range":{"end":252,"start":236}},{"range":{"end":385,"start":377}},{"range":{"end":484,"start":469}}],"name":"vhc1","ortholog_annotations":[{"gene_uniquename":"SJAG_03401","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17435","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03401","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03401","ortholog_taxonid":4932,"ortholog_uniquename":"YBR235W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03401","ortholog_taxonid":4932,"ortholog_uniquename":"YBR235W","reference_uniquename":"PMID:26896847"}],"product":"vacuolar membrane cation-chloride cotransporter Vhc1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0015379"]}},"subset_termids":["GO:0098771","GO:0022857","GO:0055085","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005774":null,"GO:0006884":null,"GO:0015379":null,"GO:0034486":null,"GO:0055064":null,"GO:0055075":null,"GO:0071805":null,"GO:1902476":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":105,"start":83}},{"assigned_by":"TMHMM","range":{"end":137,"start":115}},{"assigned_by":"TMHMM","range":{"end":172,"start":150}},{"assigned_by":"TMHMM","range":{"end":227,"start":205}},{"assigned_by":"TMHMM","range":{"end":253,"start":234}},{"assigned_by":"TMHMM","range":{"end":313,"start":291}},{"assigned_by":"TMHMM","range":{"end":348,"start":326}},{"assigned_by":"TMHMM","range":{"end":390,"start":368}},{"assigned_by":"TMHMM","range":{"end":432,"start":410}},{"assigned_by":"TMHMM","range":{"end":467,"start":445}},{"assigned_by":"TMHMM","range":{"end":501,"start":479}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03401.1"],"transcripts_by_uniquename":{"SJAG_03401.1":null},"uniprot_identifier":"B6K448","uniquename":"SJAG_03401"}


id: SJAG_03402
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105470],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[105468],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[105471],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K449","InterPro:IPR024629","EnsemblGenomes-Gn:SJAG_03402","EnsemblGenomes-Tr:EEB08256"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ste24","uniquename":"SJAG_03396"},{"uniquename":"SJAG_03398"},{"uniquename":"SJAG_03399"},{"name":"avt3","uniquename":"SJAG_03400"},{"name":"vhc1","uniquename":"SJAG_03401"},{"name":"mhr1","uniquename":"SJAG_03402"},{"name":"vps38","uniquename":"SJAG_03403"},{"name":"any1","uniquename":"SJAG_03404"},{"name":"pib2","uniquename":"SJAG_03405"},{"name":"vma11","uniquename":"SJAG_03406"},{"uniquename":"SJAG_03407"}],"genes_by_uniquename":{"SJAG_03402":null,"SPBC18H10.17c":null,"YDR296W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Transcriptional regulation of mitochondrial recombination","id":"PF12829","interpro_description":"Large ribosomal subunit protein mL67","interpro_id":"IPR024629","interpro_name":"Ribosomal_mL67","locations":[{"end":103,"start":23}],"match_end":103,"match_start":23,"name":"Mhr1"},{"dbname":"PANTHER","id":"PTHR28184","interpro_description":"Large ribosomal subunit protein mL67","interpro_id":"IPR024629","interpro_name":"Ribosomal_mL67","locations":[{"end":119,"start":21}],"match_end":119,"match_start":21,"name":"MITOCHONDRIAL HOMOLOGOUS RECOMBINATION PROTEIN 1"}],"location":{"chromosome_name":"supercont5.2","end_pos":1031008,"start_pos":1030406,"strand":"reverse"},"name":"mhr1","ortholog_annotations":[{"gene_uniquename":"SJAG_03402","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03402","ortholog_taxonid":4932,"ortholog_uniquename":"YDR296W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial ribosomal protein subunit L67","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005739","GO:0140053","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03402.1"],"transcripts_by_uniquename":{"SJAG_03402.1":null},"uniprot_identifier":"B6K449","uniquename":"SJAG_03402"}


id: SJAG_03403
data:
  {"coiled_coil_coords":[{"range":{"end":246,"start":226}},{"range":{"end":274,"start":254}}],"cv_annotations":{"biological_process":[{"annotations":[105476],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[75282],"is_not":false,"summary":null,"term":"GO:0035493"}],"cellular_component":[{"annotations":[105472],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[75281],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[105474],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[105475],"is_not":false,"summary":null,"term":"GO:0034272"}],"molecular_function":[{"annotations":[75279],"is_not":false,"summary":null,"term":"GO:0000149"}]},"dbxrefs":["GOA:B6K450","EnsemblGenomes-Gn:SJAG_03403","EnsemblGenomes-Tr:EEB08257","UniProtKB/TrEMBL:B6K450","InterPro:IPR018791"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03398"},{"uniquename":"SJAG_03399"},{"name":"avt3","uniquename":"SJAG_03400"},{"name":"vhc1","uniquename":"SJAG_03401"},{"name":"mhr1","uniquename":"SJAG_03402"},{"name":"vps38","uniquename":"SJAG_03403"},{"name":"any1","uniquename":"SJAG_03404"},{"name":"pib2","uniquename":"SJAG_03405"},{"name":"vma11","uniquename":"SJAG_03406"},{"uniquename":"SJAG_03407"},{"name":"rpn9","uniquename":"SJAG_03408"}],"genes_by_uniquename":{"HGNC:12640":null,"SJAG_03403":null,"SPBC18H10.19":null,"YLR360W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PANTHER","id":"PTHR15157","locations":[{"end":462,"start":131}],"match_end":462,"match_start":131,"name":"UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":246,"start":226},{"end":274,"start":254}],"match_end":274,"match_start":226,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":1032787,"start_pos":1031255,"strand":"forward"},"name":"vps38","ortholog_annotations":[{"gene_uniquename":"SJAG_03403","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12640","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03403","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.19","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03403","ortholog_taxonid":4932,"ortholog_uniquename":"YLR360W","reference_uniquename":"PMID:29761456"}],"product":"phophatidylinositol 3-kinase complex subunit Vps38","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000149"]}},"subset_termids":["GO:0005768","GO:0065003","GO:0061024","GO:0005773","GO:0016192","GO:0031410","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000149":null,"GO:0000329":null,"GO:0005768":null,"GO:0005829":null,"GO:0034272":null,"GO:0035493":null,"GO:0045324":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03403.1"],"transcripts_by_uniquename":{"SJAG_03403.1":null},"uniprot_identifier":"B6K450","uniquename":"SJAG_03403"}


id: SJAG_03404
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105481],"is_not":false,"summary":null,"term":"GO:0072583"},{"annotations":[105482],"is_not":false,"summary":null,"term":"GO:0070086"}],"cellular_component":[{"annotations":[105478],"is_not":false,"summary":null,"term":"GO:0030136"},{"annotations":[105479],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[105480],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[105483],"is_not":false,"summary":null,"term":"GO:0140312"}]},"dbxrefs":["GOA:B6K451","EnsemblGenomes-Tr:EEB08258","InterPro:IPR014752","InterPro:IPR024391","UniProtKB/TrEMBL:B6K451","EnsemblGenomes-Gn:SJAG_03404"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03399"},{"name":"avt3","uniquename":"SJAG_03400"},{"name":"vhc1","uniquename":"SJAG_03401"},{"name":"mhr1","uniquename":"SJAG_03402"},{"name":"vps38","uniquename":"SJAG_03403"},{"name":"any1","uniquename":"SJAG_03404"},{"name":"pib2","uniquename":"SJAG_03405"},{"name":"vma11","uniquename":"SJAG_03406"},{"uniquename":"SJAG_03407"},{"name":"rpn9","uniquename":"SJAG_03408"},{"name":"arg82","uniquename":"SJAG_03409"}],"genes_by_uniquename":{"SJAG_03404":null,"SPBC18H10.20c":null,"YOR322C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Arrestin_N terminal like","id":"PF13002","interpro_description":"LDB19, N-terminal","interpro_id":"IPR024391","interpro_name":"LDB19_N","locations":[{"end":239,"start":64}],"match_end":239,"match_start":64,"name":"LDB19"},{"dbname":"GENE3D","id":"G3DSA:2.60.40.640","interpro_description":"Arrestin-like, C-terminal","interpro_id":"IPR014752","interpro_name":"Arrestin-like_C","locations":[{"end":146,"start":50}],"match_end":146,"match_start":50}],"location":{"chromosome_name":"supercont5.2","end_pos":1034175,"start_pos":1033090,"strand":"reverse"},"name":"any1","ortholog_annotations":[{"gene_uniquename":"SJAG_03404","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.20c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03404","ortholog_taxonid":4932,"ortholog_uniquename":"YOR322C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03404","ortholog_taxonid":4932,"ortholog_uniquename":"YOR322C","reference_uniquename":"PMID:26896847"}],"product":"arrestin-related substrate adaptor Any1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0140312"]}},"subset_termids":["GO:0005829","GO:0060090","GO:0016192","GO:0031410","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0030136":null,"GO:0070086":null,"GO:0072583":null,"GO:0140312":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03404.1"],"transcripts_by_uniquename":{"SJAG_03404.1":null},"uniprot_identifier":"B6K451","uniquename":"SJAG_03404"}


id: SJAG_03405
data:
  {"cv_annotations":{"biological_process":[{"annotations":[112606],"is_not":false,"summary":null,"term":"GO:1904263"}],"cellular_component":[{"annotations":[112604],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[112605],"is_not":false,"summary":null,"term":"GO:0005774"}],"molecular_function":[{"annotations":[112607],"is_not":false,"summary":null,"term":"GO:0140786"},{"annotations":[112608],"is_not":false,"summary":null,"term":"GO:0035091"},{"annotations":[67417],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03405","InterPro:IPR000306","InterPro:IPR011011","GOA:B6K452","EnsemblGenomes-Tr:EEB08259","InterPro:IPR017455","UniProtKB/TrEMBL:B6K452","InterPro:IPR013083"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":80,"start":61}},{"range":{"end":138,"start":97}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"avt3","uniquename":"SJAG_03400"},{"name":"vhc1","uniquename":"SJAG_03401"},{"name":"mhr1","uniquename":"SJAG_03402"},{"name":"vps38","uniquename":"SJAG_03403"},{"name":"any1","uniquename":"SJAG_03404"},{"name":"pib2","uniquename":"SJAG_03405"},{"name":"vma11","uniquename":"SJAG_03406"},{"uniquename":"SJAG_03407"},{"name":"rpn9","uniquename":"SJAG_03408"},{"name":"arg82","uniquename":"SJAG_03409"},{"name":"snu13","uniquename":"SJAG_03410"}],"genes_by_uniquename":{"SJAG_03405":null,"SPBC9B6.03":null,"YGL023C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"FYVE zinc finger","id":"PF01363","interpro_description":"FYVE zinc finger","interpro_id":"IPR000306","interpro_name":"Znf_FYVE","locations":[{"end":208,"start":138}],"match_end":208,"match_start":138,"name":"FYVE"},{"dbname":"CDD","description":"FYVE_scVPS27p_like","id":"cd15760","locations":[{"end":205,"start":138}],"match_end":205,"match_start":138,"name":"FYVE_scVPS27p_like"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger FYVE/FYVE-related type profile.","id":"PS50178","interpro_description":"Zinc finger, FYVE-related","interpro_id":"IPR017455","interpro_name":"Znf_FYVE-rel","locations":[{"end":209,"start":153}],"match_end":209,"match_start":153,"name":"ZF_FYVE"},{"dbname":"SMART","id":"SM00064","interpro_description":"FYVE zinc finger","interpro_id":"IPR000306","interpro_name":"Znf_FYVE","locations":[{"end":210,"start":134}],"match_end":210,"match_start":134,"name":"fyve_4"},{"dbname":"SUPERFAMILY","id":"SSF57903","interpro_description":"Zinc finger, FYVE/PHD-type","interpro_id":"IPR011011","interpro_name":"Znf_FYVE_PHD","locations":[{"end":217,"start":138}],"match_end":217,"match_start":138,"name":"FYVE/PHD zinc finger"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":221,"start":127}],"match_end":221,"match_start":127,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PANTHER","id":"PTHR39490","interpro_description":"FYVE-type Zinc Finger Domain-Containing Protein","interpro_id":"IPR052113","interpro_name":"FYVE-type_Zinc_Finger","locations":[{"end":227,"start":108}],"match_end":227,"match_start":108,"name":"ARRESTIN DOMAIN-CONTAINING PROTEIN D"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":80,"start":61},{"end":138,"start":97}],"match_end":138,"match_start":61,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":127,"start":109}],"match_end":127,"match_start":109,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":138,"start":129}],"match_end":138,"match_start":129,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1036407,"start_pos":1035559,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":137,"start":107}}],"name":"pib2","ortholog_annotations":[{"gene_uniquename":"SJAG_03405","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC9B6.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03405","ortholog_taxonid":4932,"ortholog_uniquename":"YGL023C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03405","ortholog_taxonid":4932,"ortholog_uniquename":"YGL023C","reference_uniquename":"PMID:26896847"}],"product":"zf-FYVE type zinc finger protein and glutamine sensor Pib2","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0035091","GO:0008270"],"not-binding":["GO:0140786"]}},"subset_termids":["GO:0140299","GO:0023052","GO:0098772","GO:0008289","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0005774":null,"GO:0008270":null,"GO:0035091":null,"GO:0140786":null,"GO:1904263":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03405.1"],"transcripts_by_uniquename":{"SJAG_03405.1":null},"uniprot_identifier":"B6K452","uniquename":"SJAG_03405"}


id: SJAG_03406
data:
  {"cv_annotations":{"biological_process":[{"annotations":[64507],"is_not":false,"summary":null,"term":"GO:1902600"}],"cellular_component":[{"annotations":[99701],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[99702],"is_not":false,"summary":null,"term":"GO:0000220"}],"molecular_function":[{"annotations":[99704],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[64505],"is_not":false,"summary":null,"term":"GO:0046961"}],"mondo":[{"annotations":[86141],"is_not":false,"summary":null,"term":"MONDO:0958196"}]},"dbxrefs":["InterPro:IPR035921","InterPro:IPR002379","GOA:B6K453","UniProtKB/TrEMBL:B6K453","InterPro:IPR011555","EnsemblGenomes-Gn:SJAG_03406","InterPro:IPR000245","EnsemblGenomes-Tr:EEB08260"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vhc1","uniquename":"SJAG_03401"},{"name":"mhr1","uniquename":"SJAG_03402"},{"name":"vps38","uniquename":"SJAG_03403"},{"name":"any1","uniquename":"SJAG_03404"},{"name":"pib2","uniquename":"SJAG_03405"},{"name":"vma11","uniquename":"SJAG_03406"},{"uniquename":"SJAG_03407"},{"name":"rpn9","uniquename":"SJAG_03408"},{"name":"arg82","uniquename":"SJAG_03409"},{"name":"snu13","uniquename":"SJAG_03410"},{"name":"srp21","uniquename":"SJAG_03411"}],"genes_by_uniquename":{"HGNC:855":null,"SJAG_03406":null,"SPAC732.01":null,"YPL234C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ATP synthase subunit C","id":"PF00137","interpro_description":"V-ATPase proteolipid subunit C-like domain","interpro_id":"IPR002379","interpro_name":"ATPase_proteolipid_c-like_dom","locations":[{"end":75,"start":17},{"end":153,"start":94}],"match_end":153,"match_start":17,"name":"ATP-synt_C"},{"dbname":"CDD","description":"ATP-synt_Vo_c_ATP6C_rpt2","id":"cd18176","locations":[{"end":153,"start":87}],"match_end":153,"match_start":87,"name":"ATP-synt_Vo_c_ATP6C_rpt2"},{"dbname":"CDD","description":"ATP-synt_Vo_c_ATP6C_rpt1","id":"cd18175","locations":[{"end":79,"start":12}],"match_end":79,"match_start":12,"name":"ATP-synt_Vo_c_ATP6C_rpt1"},{"dbname":"PROSITE_PROFILES","description":"Prokaryotic membrane lipoprotein lipid attachment site profile.","id":"PS51257","locations":[{"end":26,"start":1}],"match_end":26,"match_start":1,"name":"PROKAR_LIPOPROTEIN"},{"dbname":"PRINTS","description":"Vacuolar ATP synthase 16kDa subunit signature","id":"PR00122","interpro_description":"V-ATPase proteolipid subunit","interpro_id":"IPR000245","interpro_name":"ATPase_proteolipid_csu","locations":[{"end":53,"start":29},{"end":79,"start":55},{"end":155,"start":105}],"match_end":155,"match_start":29,"name":"VACATPASE"},{"dbname":"FUNFAM","description":"V-type proton ATPase proteolipid subunit","id":"G3DSA:1.20.120.610:FF:000003","locations":[{"end":160,"start":10}],"match_end":160,"match_start":10},{"dbname":"SUPERFAMILY","id":"SSF81333","interpro_description":"F/V-ATP synthase subunit C superfamily","interpro_id":"IPR035921","interpro_name":"F/V-ATP_Csub_sf","locations":[{"end":76,"start":15},{"end":156,"start":85}],"match_end":156,"match_start":15,"name":"F1F0 ATP synthase subunit C"},{"dbname":"GENE3D","id":"G3DSA:1.20.120.610","interpro_description":"F/V-ATP synthase subunit C superfamily","interpro_id":"IPR035921","interpro_name":"F/V-ATP_Csub_sf","locations":[{"end":160,"start":10}],"match_end":160,"match_start":10},{"dbname":"PANTHER","id":"PTHR10263","locations":[{"end":156,"start":7}],"match_end":156,"match_start":7,"name":"V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT"},{"dbname":"NCBIFAM","description":"V-type ATPase subunit C","id":"TIGR01100","interpro_description":"V-ATPase proteolipid subunit C, eukaryotic","interpro_id":"IPR011555","interpro_name":"ATPase_proteolipid_su_C_euk","locations":[{"end":119,"start":12}],"match_end":119,"match_start":12,"name":"V_ATP_synt_C"}],"location":{"chromosome_name":"supercont5.2","end_pos":1041355,"start_pos":1040595,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":44,"start":31}},{"range":{"end":114,"start":95}},{"range":{"end":152,"start":141}}],"name":"vma11","ortholog_annotations":[{"gene_uniquename":"SJAG_03406","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:855","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03406","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC732.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03406","ortholog_taxonid":4932,"ortholog_uniquename":"YPL234C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03406","ortholog_taxonid":4932,"ortholog_uniquename":"YPL234C","reference_uniquename":"PMID:26896847"}],"product":"V-type ATPase V0 subunit c' (proteolipid subunit)","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016887","GO:0046961"]}},"subset_termids":["GO:0016887","GO:0022857","GO:0005773","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000220":null,"GO:0000329":null,"GO:0016887":null,"GO:0046961":null,"GO:1902600":null,"MONDO:0958196":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":42,"start":20}},{"assigned_by":"TMHMM","range":{"end":76,"start":54}},{"assigned_by":"TMHMM","range":{"end":113,"start":91}},{"assigned_by":"TMHMM","range":{"end":155,"start":133}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03406.1"],"transcripts_by_uniquename":{"SJAG_03406.1":null},"uniprot_identifier":"B6K453","uniquename":"SJAG_03406"}


id: SJAG_03407
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[98567],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[98568],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98569],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[98570],"is_not":false,"summary":null,"term":"GO:0008237"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08261","InterPro:IPR036404","UniProtKB/TrEMBL:B6K454","EnsemblGenomes-Gn:SJAG_03407","InterPro:IPR021917","InterPro:IPR001229"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mhr1","uniquename":"SJAG_03402"},{"name":"vps38","uniquename":"SJAG_03403"},{"name":"any1","uniquename":"SJAG_03404"},{"name":"pib2","uniquename":"SJAG_03405"},{"name":"vma11","uniquename":"SJAG_03406"},{"uniquename":"SJAG_03407"},{"name":"rpn9","uniquename":"SJAG_03408"},{"name":"arg82","uniquename":"SJAG_03409"},{"name":"snu13","uniquename":"SJAG_03410"},{"name":"srp21","uniquename":"SJAG_03411"},{"uniquename":"SJAG_03412"}],"genes_by_uniquename":{"SJAG_03407":null,"SPAC607.06c":null,"YIL108W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Jacalin-like lectin domain","id":"PF01419","interpro_description":"Jacalin-like lectin domain","interpro_id":"IPR001229","interpro_name":"Jacalin-like_lectin_dom","locations":[{"end":565,"start":479}],"match_end":565,"match_start":479,"name":"Jacalin"},{"dbname":"PFAM","description":"Putative peptidase family","id":"PF12044","interpro_description":"Uncharacterised protein family, zinc metallopeptidase-like","interpro_id":"IPR021917","interpro_name":"Unchr_Zn-peptidase-like","locations":[{"end":383,"start":4}],"match_end":383,"match_start":4,"name":"Metallopep"},{"dbname":"PROSITE_PROFILES","description":"Jacalin-type lectin domain profile.","id":"PS51752","interpro_description":"Jacalin-like lectin domain","interpro_id":"IPR001229","interpro_name":"Jacalin-like_lectin_dom","locations":[{"end":613,"start":478}],"match_end":613,"match_start":478,"name":"JACALIN_LECTIN"},{"dbname":"SUPERFAMILY","id":"SSF55486","locations":[{"end":329,"start":263}],"match_end":329,"match_start":263,"name":"Metalloproteases (\"zincins\"), catalytic domain"},{"dbname":"SUPERFAMILY","id":"SSF51101","interpro_description":"Jacalin-like lectin domain superfamily","interpro_id":"IPR036404","interpro_name":"Jacalin-like_lectin_dom_sf","locations":[{"end":612,"start":482}],"match_end":612,"match_start":482,"name":"Mannose-binding lectins"},{"dbname":"GENE3D","id":"G3DSA:2.100.10.30","interpro_description":"Jacalin-like lectin domain superfamily","interpro_id":"IPR036404","interpro_name":"Jacalin-like_lectin_dom_sf","locations":[{"end":568,"start":454}],"match_end":568,"match_start":454},{"dbname":"PANTHER","id":"PTHR21054","interpro_description":"Zinc-dependent metalloproteinase M10B","interpro_id":"IPR053002","interpro_name":"Metalloproteinase_M10B","locations":[{"end":613,"start":2}],"match_end":613,"match_start":2,"name":"ZINC METALLOPROTEINASE-RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":1043671,"start_pos":1041734,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03407","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC607.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03407","ortholog_taxonid":4932,"ortholog_uniquename":"YIL108W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03407","ortholog_taxonid":4932,"ortholog_uniquename":"YIL108W","reference_uniquename":"PMID:26896847"}],"product":"metallopeptidase","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008237"]}},"subset_termids":["GO:0008233","GO:0005829","GO:0005634","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008237":null,"GO:0032153":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03407.1"],"transcripts_by_uniquename":{"SJAG_03407.1":null},"uniprot_identifier":"B6K454","uniquename":"SJAG_03407"}


id: SJAG_03408
data:
  {"coiled_coil_coords":[{"range":{"end":113,"start":93}}],"cv_annotations":{"biological_process":[{"annotations":[98565],"is_not":false,"summary":null,"term":"GO:0043161"}],"cellular_component":[{"annotations":[72626],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72625],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[72628],"is_not":false,"summary":null,"term":"GO:0008541"}],"molecular_function":[{"annotations":[72624],"is_not":false,"summary":null,"term":"GO:0005198"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K455","EnsemblGenomes-Tr:EEB08262","InterPro:IPR000717","InterPro:IPR035298","EnsemblGenomes-Gn:SJAG_03408","GOA:B6K455","InterPro:IPR036390"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps38","uniquename":"SJAG_03403"},{"name":"any1","uniquename":"SJAG_03404"},{"name":"pib2","uniquename":"SJAG_03405"},{"name":"vma11","uniquename":"SJAG_03406"},{"uniquename":"SJAG_03407"},{"name":"rpn9","uniquename":"SJAG_03408"},{"name":"arg82","uniquename":"SJAG_03409"},{"name":"snu13","uniquename":"SJAG_03410"},{"name":"srp21","uniquename":"SJAG_03411"},{"uniquename":"SJAG_03412"},{"name":"ebp2","uniquename":"SJAG_03413"}],"genes_by_uniquename":{"HGNC:9558":null,"SJAG_03408":null,"SPAC607.05":null,"YDR427W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PCI domain","id":"PF01399","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":339,"start":264}],"match_end":339,"match_start":264,"name":"PCI"},{"dbname":"PFAM","description":"PSD13 N-terminal repeats","id":"PF22037","interpro_description":"PSD13, N-terminal","interpro_id":"IPR054179","interpro_name":"PSD13_N","locations":[{"end":242,"start":28}],"match_end":242,"match_start":28,"name":"PSD13_N"},{"dbname":"PFAM","description":"Rpn9 C-terminal helix","id":"PF18261","interpro_description":"Rpn9, C-terminal helix","interpro_id":"IPR040798","interpro_name":"Rpn9_C","locations":[{"end":375,"start":344}],"match_end":375,"match_start":344,"name":"Rpn9_C"},{"dbname":"PROSITE_PROFILES","description":"PCI domain profile.","id":"PS50250","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":343,"start":177}],"match_end":343,"match_start":177,"name":"PCI"},{"dbname":"SMART","description":"motif in proteasome subunits, Int-6, Nip-1 and TRIP-15","id":"SM00088","interpro_description":"Proteasome component (PCI) domain","interpro_id":"IPR000717","interpro_name":"PCI_dom","locations":[{"end":361,"start":268}],"match_end":361,"match_start":268,"name":"PINT"},{"dbname":"SUPERFAMILY","id":"SSF46785","interpro_description":"Winged helix DNA-binding domain superfamily","interpro_id":"IPR036390","interpro_name":"WH_DNA-bd_sf","locations":[{"end":343,"start":265}],"match_end":343,"match_start":265,"name":"\"Winged helix\" DNA-binding domain"},{"dbname":"PANTHER","id":"PTHR10539","interpro_description":"26S Proteasome non-ATPase regulatory subunit 13","interpro_id":"IPR035298","interpro_name":"PSMD13","locations":[{"end":380,"start":9}],"match_end":380,"match_start":9,"name":"26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13"},{"dbname":"COILS","id":"Coil","locations":[{"end":113,"start":93}],"match_end":113,"match_start":93,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":1044954,"start_pos":1043770,"strand":"reverse"},"name":"rpn9","ortholog_annotations":[{"gene_uniquename":"SJAG_03408","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9558","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03408","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC607.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03408","ortholog_taxonid":4932,"ortholog_uniquename":"YDR427W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03408","ortholog_taxonid":4932,"ortholog_uniquename":"YDR427W","reference_uniquename":"PMID:26896847"}],"product":"19S proteasome regulatory subunit Rpn9","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0005198"]}},"subset_termids":["GO:0030163","GO:0005829","GO:0005634","GO:0005198"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005198":null,"GO:0005634":null,"GO:0005829":null,"GO:0008541":null,"GO:0043161":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03408.1"],"transcripts_by_uniquename":{"SJAG_03408.1":null},"uniprot_identifier":"B6K455","uniquename":"SJAG_03408"}


id: SJAG_03409
data:
  {"cv_annotations":{"biological_process":[{"annotations":[75548],"is_not":false,"summary":null,"term":"GO:0032958"}],"cellular_component":[{"annotations":[98553],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[75544],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[98556],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[98557],"is_not":false,"summary":null,"term":"GO:0000825"},{"annotations":[98558],"is_not":false,"summary":null,"term":"GO:0047326"},{"annotations":[75546],"is_not":false,"summary":null,"term":"GO:0000824"},{"annotations":[75547],"is_not":false,"summary":null,"term":"GO:0008440"},{"annotations":[98561],"is_not":false,"summary":null,"term":"GO:0000823"}]},"dbxrefs":["GOA:B6K456","InterPro:IPR038286","EnsemblGenomes-Gn:SJAG_03409","InterPro:IPR005522","EnsemblGenomes-Tr:EEB08263","UniProtKB/TrEMBL:B6K456"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"any1","uniquename":"SJAG_03404"},{"name":"pib2","uniquename":"SJAG_03405"},{"name":"vma11","uniquename":"SJAG_03406"},{"uniquename":"SJAG_03407"},{"name":"rpn9","uniquename":"SJAG_03408"},{"name":"arg82","uniquename":"SJAG_03409"},{"name":"snu13","uniquename":"SJAG_03410"},{"name":"srp21","uniquename":"SJAG_03411"},{"uniquename":"SJAG_03412"},{"name":"ebp2","uniquename":"SJAG_03413"},{"name":"pdi2","uniquename":"SJAG_03414"}],"genes_by_uniquename":{"HGNC:20739":null,"SJAG_03409":null,"SPAC607.04":null,"YDR173C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Inositol polyphosphate kinase","id":"PF03770","interpro_description":"Inositol polyphosphate kinase","interpro_id":"IPR005522","interpro_name":"IPK","locations":[{"end":264,"start":87}],"match_end":264,"match_start":87,"name":"IPK"},{"dbname":"SUPERFAMILY","id":"SSF56104","locations":[{"end":267,"start":15}],"match_end":267,"match_start":15,"name":"SAICAR synthase-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.470.160","interpro_description":"Inositol polyphosphate kinase superfamily","interpro_id":"IPR038286","interpro_name":"IPK_sf","locations":[{"end":271,"start":29}],"match_end":271,"match_start":29,"name":"Inositol polyphosphate kinase"},{"dbname":"PANTHER","id":"PTHR12400","interpro_description":"Inositol polyphosphate kinase","interpro_id":"IPR005522","interpro_name":"IPK","locations":[{"end":269,"start":9}],"match_end":269,"match_start":9,"name":"INOSITOL POLYPHOSPHATE KINASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":1046110,"start_pos":1045289,"strand":"reverse"},"name":"arg82","ortholog_annotations":[{"gene_uniquename":"SJAG_03409","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20739","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03409","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC607.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03409","ortholog_taxonid":4932,"ortholog_uniquename":"YDR173C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03409","ortholog_taxonid":4932,"ortholog_uniquename":"YDR173C","reference_uniquename":"PMID:26896847"}],"product":"inositol polyphosphate IP3/IP4 kinase Arg82","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0047326","GO:0000824","GO:0000825","GO:0008440","GO:0000823"]}},"subset_termids":["GO:0005829","GO:0016301","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000823":null,"GO:0000824":null,"GO:0000825":null,"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0008440":null,"GO:0032958":null,"GO:0047326":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03409.1"],"transcripts_by_uniquename":{"SJAG_03409.1":null},"uniprot_identifier":"B6K456","uniquename":"SJAG_03409"}


id: SJAG_03410
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76075],"is_not":false,"summary":null,"term":"GO:0030490"},{"annotations":[76070],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[98551],"is_not":false,"summary":null,"term":"GO:0000452"}],"cellular_component":[{"annotations":[76071],"is_not":false,"summary":null,"term":"GO:0031428"},{"annotations":[76068],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[76074],"is_not":false,"summary":null,"term":"GO:0071011"},{"annotations":[76072],"is_not":false,"summary":null,"term":"GO:0032040"},{"annotations":[76073],"is_not":false,"summary":null,"term":"GO:0046540"}],"molecular_function":[{"annotations":[76069],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR004037","EnsemblGenomes-Tr:EEB08264","GOA:B6K457","InterPro:IPR002415","EnsemblGenomes-Gn:SJAG_03410","InterPro:IPR004038","UniProtKB/TrEMBL:B6K457","InterPro:IPR029064","InterPro:IPR018492"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pib2","uniquename":"SJAG_03405"},{"name":"vma11","uniquename":"SJAG_03406"},{"uniquename":"SJAG_03407"},{"name":"rpn9","uniquename":"SJAG_03408"},{"name":"arg82","uniquename":"SJAG_03409"},{"name":"snu13","uniquename":"SJAG_03410"},{"name":"srp21","uniquename":"SJAG_03411"},{"uniquename":"SJAG_03412"},{"name":"ebp2","uniquename":"SJAG_03413"},{"name":"pdi2","uniquename":"SJAG_03414"},{"name":"tom22","uniquename":"SJAG_03415"}],"genes_by_uniquename":{"HGNC:7819":null,"SJAG_03410":null,"SPAC607.03c":null,"YEL026W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family","id":"PF01248","interpro_description":"Ribosomal protein eL8/eL30/eS12/Gadd45","interpro_id":"IPR004038","interpro_name":"Ribosomal_eL8/eL30/eS12/Gad45","locations":[{"end":108,"start":18}],"match_end":108,"match_start":18,"name":"Ribosomal_L7Ae"},{"dbname":"CDD","description":"SNU13","id":"cd21104","locations":[{"end":125,"start":4}],"match_end":125,"match_start":4,"name":"SNU13"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L7Ae signature.","id":"PS01082","interpro_description":"Large ribosomal subunit protein eL8-like, conserved site","interpro_id":"IPR004037","interpro_name":"Ribosomal_eL8-like_CS","locations":[{"end":87,"start":70}],"match_end":87,"match_start":70,"name":"RIBOSOMAL_L7AE"},{"dbname":"PRINTS","description":"High mobility group-like nuclear protein signature","id":"PR00883","interpro_description":"H/ACA ribonucleoprotein complex, subunit Nhp2-like","interpro_id":"IPR002415","interpro_name":"H/ACA_rnp_Nhp2-like","locations":[{"end":33,"start":5},{"end":45,"start":35},{"end":91,"start":79}],"match_end":91,"match_start":5,"name":"NUCLEARHMG"},{"dbname":"PRINTS","description":"Ribosomal protein L7A/RS6 family signature","id":"PR00881","interpro_description":"Ribosomal protein eL8/Nhp2 family","interpro_id":"IPR018492","interpro_name":"Ribosomal_eL8/Nhp2","locations":[{"end":46,"start":32},{"end":64,"start":51},{"end":91,"start":67}],"match_end":91,"match_start":32,"name":"L7ARS6FAMILY"},{"dbname":"FUNFAM","description":"NHP2-like protein 1 homolog","id":"G3DSA:3.30.1330.30:FF:000002","locations":[{"end":125,"start":1}],"match_end":125,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF55315","interpro_description":"Ribosomal protein eL30-like superfamily","interpro_id":"IPR029064","interpro_name":"Ribosomal_eL30-like_sf","locations":[{"end":119,"start":2}],"match_end":119,"match_start":2,"name":"L30e-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.1330.30","interpro_description":"Ribosomal protein eL30-like superfamily","interpro_id":"IPR029064","interpro_name":"Ribosomal_eL30-like_sf","locations":[{"end":125,"start":1}],"match_end":125,"match_start":1},{"dbname":"PANTHER","id":"PTHR23105","interpro_description":"Large ribosomal subunit protein eL8/uL1-like","interpro_id":"IPR050257","interpro_name":"eL8/uL1-like","locations":[{"end":116,"start":9}],"match_end":116,"match_start":9,"name":"RIBOSOMAL PROTEIN L7AE FAMILY MEMBER"}],"location":{"chromosome_name":"supercont5.2","end_pos":1047045,"start_pos":1046617,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":68,"start":57}}],"name":"snu13","ortholog_annotations":[{"gene_uniquename":"SJAG_03410","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7819","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03410","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC607.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03410","ortholog_taxonid":4932,"ortholog_uniquename":"YEL026W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03410","ortholog_taxonid":4932,"ortholog_uniquename":"YEL026W","reference_uniquename":"PMID:26896847"}],"product":"U3 snoRNP-associated protein Snu13","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0005730","GO:0030684","GO:0042254","GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000452":null,"GO:0003723":null,"GO:0005730":null,"GO:0030490":null,"GO:0031428":null,"GO:0032040":null,"GO:0045292":null,"GO:0046540":null,"GO:0071011":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03410.1"],"transcripts_by_uniquename":{"SJAG_03410.1":null},"uniprot_identifier":"B6K457","uniquename":"SJAG_03410"}


id: SJAG_03411
data:
  {"cv_annotations":{"biological_process":[{"annotations":[66165],"is_not":false,"summary":null,"term":"GO:0006614"}],"cellular_component":[{"annotations":[90588],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90589],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[90591],"is_not":false,"summary":null,"term":"GO:0005786"}],"molecular_function":[{"annotations":[66164],"is_not":false,"summary":null,"term":"GO:0008312"}]},"dbxrefs":["InterPro:IPR009018","InterPro:IPR039914","EnsemblGenomes-Tr:EEB08265","InterPro:IPR039432","UniProtKB/TrEMBL:B6K458","GOA:B6K458","EnsemblGenomes-Gn:SJAG_03411"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":122,"start":88}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vma11","uniquename":"SJAG_03406"},{"uniquename":"SJAG_03407"},{"name":"rpn9","uniquename":"SJAG_03408"},{"name":"arg82","uniquename":"SJAG_03409"},{"name":"snu13","uniquename":"SJAG_03410"},{"name":"srp21","uniquename":"SJAG_03411"},{"uniquename":"SJAG_03412"},{"name":"ebp2","uniquename":"SJAG_03413"},{"name":"pdi2","uniquename":"SJAG_03414"},{"name":"tom22","uniquename":"SJAG_03415"},{"name":"mdm10","uniquename":"SJAG_03416"}],"genes_by_uniquename":{"HGNC:11304":null,"SJAG_03411":null,"SPAC17H9.07":null,"YKL122C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Signal recognition particle 9 kDa protein (SRP9)","id":"PF05486","interpro_description":"SRP9 domain","interpro_id":"IPR039432","interpro_name":"SRP9_dom","locations":[{"end":75,"start":5}],"match_end":75,"match_start":5,"name":"SRP9-21"},{"dbname":"SUPERFAMILY","id":"SSF54762","interpro_description":"Signal recognition particle, SRP9/SRP14 subunit","interpro_id":"IPR009018","interpro_name":"Signal_recog_particle_SRP9/14","locations":[{"end":81,"start":5}],"match_end":81,"match_start":5,"name":"Signal recognition particle alu RNA binding heterodimer, SRP9/14"},{"dbname":"GENE3D","id":"G3DSA:3.30.720.10","interpro_description":"Signal recognition particle, SRP9/SRP14 subunit","interpro_id":"IPR009018","interpro_name":"Signal_recog_particle_SRP9/14","locations":[{"end":86,"start":3}],"match_end":86,"match_start":3,"name":"Signal recognition particle alu RNA binding heterodimer, srp9/1"},{"dbname":"PANTHER","id":"PTHR12834","interpro_description":"Signal recognition particle SRP9-like","interpro_id":"IPR039914","interpro_name":"SRP9-like","locations":[{"end":120,"start":1}],"match_end":120,"match_start":1,"name":"SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":122,"start":88}],"match_end":122,"match_start":88,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":122,"start":112}],"match_end":122,"match_start":112,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1051579,"start_pos":1051115,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":121,"start":103}}],"name":"srp21","ortholog_annotations":[{"gene_uniquename":"SJAG_03411","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11304","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03411","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03411","ortholog_taxonid":4932,"ortholog_uniquename":"YKL122C","reference_uniquename":"PMID:29761456"}],"product":"signal recognition particle subunit Srp21","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008312"]}},"subset_termids":["GO:0005829","GO:0006605","GO:0005730","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0005786":null,"GO:0005829":null,"GO:0006614":null,"GO:0008312":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03411.1"],"transcripts_by_uniquename":{"SJAG_03411.1":null},"uniprot_identifier":"B6K458","uniquename":"SJAG_03411"}


id: SJAG_03412
data:
  {"coiled_coil_coords":[{"range":{"end":61,"start":41}}],"cv_annotations":{"cellular_component":[{"annotations":[90587],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K459","EnsemblGenomes-Gn:SJAG_03412","InterPro:IPR025451","EnsemblGenomes-Tr:EEB08266"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":65,"start":34}},{"range":{"end":208,"start":99}},{"range":{"end":304,"start":269}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03407"},{"name":"rpn9","uniquename":"SJAG_03408"},{"name":"arg82","uniquename":"SJAG_03409"},{"name":"snu13","uniquename":"SJAG_03410"},{"name":"srp21","uniquename":"SJAG_03411"},{"uniquename":"SJAG_03412"},{"name":"ebp2","uniquename":"SJAG_03413"},{"name":"pdi2","uniquename":"SJAG_03414"},{"name":"tom22","uniquename":"SJAG_03415"},{"name":"mdm10","uniquename":"SJAG_03416"},{"name":"cdt2","uniquename":"SJAG_03417"}],"genes_by_uniquename":{"HGNC:26282":null,"SJAG_03412":null,"SPAC17H9.06c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Domain of unknown function (DUF4211)","id":"PF13926","interpro_description":"Domain of unknown function DUF4211","interpro_id":"IPR025451","interpro_name":"DUF4211","locations":[{"end":434,"start":303}],"match_end":434,"match_start":303,"name":"DUF4211"},{"dbname":"PANTHER","id":"PTHR14689","locations":[{"end":531,"start":51}],"match_end":531,"match_start":51,"name":"PHORBOL-ESTER_DAG-TYPE DOMAIN-CONTAINING PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":61,"start":41}],"match_end":61,"match_start":41,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":65,"start":34},{"end":208,"start":99},{"end":304,"start":269}],"match_end":304,"match_start":34,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":203,"start":192}],"match_end":203,"match_start":192,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":148,"start":139},{"end":188,"start":177}],"match_end":188,"match_start":139,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":126,"start":117},{"end":301,"start":286}],"match_end":301,"match_start":117,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":62,"start":44}],"match_end":62,"match_start":44,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1053487,"start_pos":1051727,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":63,"start":47}},{"range":{"end":108,"start":95}},{"range":{"end":203,"start":188}},{"range":{"end":245,"start":228}},{"range":{"end":265,"start":254}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03412","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26282","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03412","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.06c","reference_uniquename":"PMID:21511999"}],"product":"nuclear protein implicated in signalling; DUF4196 and DUF4211, human CCDC82 ortholog","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03412.1"],"transcripts_by_uniquename":{"SJAG_03412.1":null},"uniprot_identifier":"B6K459","uniquename":"SJAG_03412"}


id: SJAG_03413
data:
  {"coiled_coil_coords":[{"range":{"end":55,"start":35}},{"range":{"end":244,"start":224}}],"cv_annotations":{"biological_process":[{"annotations":[75911],"is_not":false,"summary":null,"term":"GO:0042273"},{"annotations":[75913],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[75909],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[75910],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[75912],"is_not":false,"summary":null,"term":"GO:0030687"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03413","InterPro:IPR008610","UniProtKB/TrEMBL:B6K460","EnsemblGenomes-Tr:EEB08267","GOA:B6K460"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":83,"start":1}},{"range":{"end":341,"start":227}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpn9","uniquename":"SJAG_03408"},{"name":"arg82","uniquename":"SJAG_03409"},{"name":"snu13","uniquename":"SJAG_03410"},{"name":"srp21","uniquename":"SJAG_03411"},{"uniquename":"SJAG_03412"},{"name":"ebp2","uniquename":"SJAG_03413"},{"name":"pdi2","uniquename":"SJAG_03414"},{"name":"tom22","uniquename":"SJAG_03415"},{"name":"mdm10","uniquename":"SJAG_03416"},{"name":"cdt2","uniquename":"SJAG_03417"},{"name":"psc3","uniquename":"SJAG_03418"}],"genes_by_uniquename":{"HGNC:15531":null,"SJAG_03413":null,"SPAC17H9.05":null,"YKL172W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Eukaryotic rRNA processing protein EBP2","id":"PF05890","interpro_description":"Eukaryotic rRNA processing","interpro_id":"IPR008610","interpro_name":"Ebp2","locations":[{"end":336,"start":102}],"match_end":336,"match_start":102,"name":"Ebp2"},{"dbname":"PANTHER","id":"PTHR13028","interpro_description":"Eukaryotic rRNA processing","interpro_id":"IPR008610","interpro_name":"Ebp2","locations":[{"end":339,"start":34}],"match_end":339,"match_start":34,"name":"RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":55,"start":35},{"end":244,"start":224}],"match_end":244,"match_start":35,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":83,"start":1},{"end":341,"start":227}],"match_end":341,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":83,"start":64},{"end":263,"start":254}],"match_end":263,"match_start":64,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":44,"start":18},{"end":63,"start":52},{"end":239,"start":227}],"match_end":239,"match_start":18,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":304,"start":277},{"end":341,"start":319}],"match_end":341,"match_start":277,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1054645,"start_pos":1053620,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":18,"start":3}},{"range":{"end":94,"start":62}},{"range":{"end":142,"start":132}},{"range":{"end":340,"start":316}}],"name":"ebp2","ortholog_annotations":[{"gene_uniquename":"SJAG_03413","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15531","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03413","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03413","ortholog_taxonid":4932,"ortholog_uniquename":"YKL172W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03413","ortholog_taxonid":4932,"ortholog_uniquename":"YKL172W","reference_uniquename":"PMID:26896847"}],"product":"rRNA processing protein Ebp2","references_by_uniquename":{"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005730","GO:0030684","GO:0034399","GO:0042254","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0006364":null,"GO:0030687":null,"GO:0034399":null,"GO:0042273":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03413.1"],"transcripts_by_uniquename":{"SJAG_03413.1":null},"uniprot_identifier":"B6K460","uniquename":"SJAG_03413"}


id: SJAG_03414
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":366,"start":20}}],"cv_annotations":{"biological_process":[{"annotations":[90652],"is_not":false,"summary":null,"term":"GO:0034599"},{"annotations":[90654],"is_not":false,"summary":null,"term":"GO:0034975"}],"cellular_component":[{"annotations":[69902],"is_not":false,"summary":null,"term":"GO:0005783"}],"molecular_function":[{"annotations":[69903],"is_not":false,"summary":null,"term":"GO:0003756"},{"annotations":[90656],"is_not":false,"summary":null,"term":"GO:0015035"}],"sequence":[{"annotations":[80404],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["GOA:B6K461","InterPro:IPR011679","EnsemblGenomes-Tr:EEB08268","UniProtKB/TrEMBL:B6K461","InterPro:IPR036249","InterPro:IPR017937","InterPro:IPR013766","InterPro:IPR005788","InterPro:IPR036356","EnsemblGenomes-Gn:SJAG_03414"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"arg82","uniquename":"SJAG_03409"},{"name":"snu13","uniquename":"SJAG_03410"},{"name":"srp21","uniquename":"SJAG_03411"},{"uniquename":"SJAG_03412"},{"name":"ebp2","uniquename":"SJAG_03413"},{"name":"pdi2","uniquename":"SJAG_03414"},{"name":"tom22","uniquename":"SJAG_03415"},{"name":"mdm10","uniquename":"SJAG_03416"},{"name":"cdt2","uniquename":"SJAG_03417"},{"name":"psc3","uniquename":"SJAG_03418"},{"uniquename":"SJAG_03419"}],"genes_by_uniquename":{"SJAG_03414":null,"SPAC17H9.14c":null,"YOL088C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Endoplasmic reticulum protein ERp29, C-terminal domain","id":"PF07749","interpro_description":"Endoplasmic reticulum resident protein 29, C-terminal","interpro_id":"IPR011679","interpro_name":"ERp29_C","locations":[{"end":356,"start":266}],"match_end":356,"match_start":266,"name":"ERp29"},{"dbname":"PFAM","description":"Thioredoxin","id":"PF00085","interpro_description":"Thioredoxin domain","interpro_id":"IPR013766","interpro_name":"Thioredoxin_domain","locations":[{"end":126,"start":29},{"end":248,"start":144}],"match_end":248,"match_start":29,"name":"Thioredoxin"},{"dbname":"CDD","description":"PDI_a_ERp38","id":"cd02998","locations":[{"end":125,"start":21}],"match_end":125,"match_start":21,"name":"PDI_a_ERp38"},{"dbname":"CDD","description":"ERp29c","id":"cd00238","interpro_description":"Endoplasmic reticulum resident protein 29, C-terminal","interpro_id":"IPR011679","interpro_name":"ERp29_C","locations":[{"end":356,"start":268}],"match_end":356,"match_start":268,"name":"ERp29c"},{"dbname":"PROSITE_PATTERNS","description":"Thioredoxin family active site.","id":"PS00194","interpro_description":"Thioredoxin, conserved site","interpro_id":"IPR017937","interpro_name":"Thioredoxin_CS","locations":[{"end":61,"start":43}],"match_end":61,"match_start":43,"name":"THIOREDOXIN_1"},{"dbname":"PROSITE_PROFILES","description":"Thioredoxin domain profile.","id":"PS51352","interpro_description":"Thioredoxin domain","interpro_id":"IPR013766","interpro_name":"Thioredoxin_domain","locations":[{"end":130,"start":4},{"end":252,"start":132}],"match_end":252,"match_start":4,"name":"THIOREDOXIN_2"},{"dbname":"PRINTS","description":"Thioredoxin family signature","id":"PR00421","locations":[{"end":59,"start":42},{"end":224,"start":213}],"match_end":224,"match_start":42,"name":"THIOREDOXIN"},{"dbname":"SUPERFAMILY","id":"SSF47933","interpro_description":"Endoplasmic reticulum resident protein 29, C-terminal domain superfamily","interpro_id":"IPR036356","interpro_name":"ERp29_C_sf","locations":[{"end":365,"start":265}],"match_end":365,"match_start":265,"name":"ERP29 C domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52833","interpro_description":"Thioredoxin-like superfamily","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like_sf","locations":[{"end":130,"start":29},{"end":249,"start":141}],"match_end":249,"match_start":29,"name":"Thioredoxin-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.30.10","locations":[{"end":259,"start":13}],"match_end":259,"match_start":13,"name":"Glutaredoxin"},{"dbname":"GENE3D","id":"G3DSA:1.20.1150.12","interpro_description":"Endoplasmic reticulum resident protein 29, C-terminal domain superfamily","interpro_id":"IPR036356","interpro_name":"ERp29_C_sf","locations":[{"end":366,"start":266}],"match_end":366,"match_start":266},{"dbname":"PANTHER","id":"PTHR45672","interpro_description":"Protein Disulfide Isomerase","interpro_id":"IPR051063","interpro_name":"PDI","locations":[{"end":343,"start":140}],"match_end":343,"match_start":140,"name":"PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED"},{"dbname":"NCBIFAM","description":"protein disulfide-isomerase domain","id":"TIGR01126","interpro_description":"Protein disulfide-isomerase, thioredoxin-like domain","interpro_id":"IPR005788","interpro_name":"PDI_thioredoxin-like_dom","locations":[{"end":128,"start":30}],"match_end":128,"match_start":30,"name":"pdi_dom"}],"location":{"chromosome_name":"supercont5.2","end_pos":1056180,"start_pos":1055030,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":12,"start":2}},{"range":{"end":145,"start":133}},{"range":{"end":165,"start":154}}],"name":"pdi2","ortholog_annotations":[{"gene_uniquename":"SJAG_03414","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03414","ortholog_taxonid":4932,"ortholog_uniquename":"YOL088C","reference_uniquename":"PMID:29761456"}],"product":"ER protein disulfide isomerase Pdi2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":19,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003756","GO:0015035"]}},"subset_termids":["GO:0005783","GO:0140096","GO:0015036","GO:0016853","GO:0006457","GO:0051604","GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003756":null,"GO:0005783":null,"GO:0015035":null,"GO:0034599":null,"GO:0034975":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03414.1"],"transcripts_by_uniquename":{"SJAG_03414.1":null},"uniprot_identifier":"B6K461","uniquename":"SJAG_03414"}


id: SJAG_03415
data:
  {"coiled_coil_coords":[{"range":{"end":21,"start":1}}],"cv_annotations":{"biological_process":[{"annotations":[67844],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[90659],"is_not":false,"summary":null,"term":"GO:0030150"}],"cellular_component":[{"annotations":[90657],"is_not":false,"summary":null,"term":"GO:0005742"}],"molecular_function":[{"annotations":[90660],"is_not":false,"summary":null,"term":"GO:0016887"}]},"dbxrefs":["InterPro:IPR005683","UniProtKB/TrEMBL:B6K462","EnsemblGenomes-Gn:SJAG_03415","EnsemblGenomes-Tr:EEB08269","GOA:B6K462"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"snu13","uniquename":"SJAG_03410"},{"name":"srp21","uniquename":"SJAG_03411"},{"uniquename":"SJAG_03412"},{"name":"ebp2","uniquename":"SJAG_03413"},{"name":"pdi2","uniquename":"SJAG_03414"},{"name":"tom22","uniquename":"SJAG_03415"},{"name":"mdm10","uniquename":"SJAG_03416"},{"name":"cdt2","uniquename":"SJAG_03417"},{"name":"psc3","uniquename":"SJAG_03418"},{"uniquename":"SJAG_03419"},{"uniquename":"SJAG_03420"}],"genes_by_uniquename":{"HGNC:18002":null,"SJAG_03415":null,"SPAC17H9.16":null,"YNL131W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mitochondrial import receptor subunit Tom22","id":"PF04281","interpro_description":"Mitochondrial import receptor subunit Tom22","interpro_id":"IPR005683","interpro_name":"Tom22","locations":[{"end":129,"start":1}],"match_end":129,"match_start":1,"name":"Tom22"},{"dbname":"CDD","description":"TOM22","id":"cd22884","locations":[{"end":117,"start":51}],"match_end":117,"match_start":51,"name":"TOM22"},{"dbname":"PANTHER","id":"PTHR12504","interpro_description":"Mitochondrial import receptor subunit Tom22","interpro_id":"IPR005683","interpro_name":"Tom22","locations":[{"end":134,"start":2}],"match_end":134,"match_start":2,"name":"MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22"},{"dbname":"COILS","id":"Coil","locations":[{"end":21,"start":1}],"match_end":21,"match_start":1,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":1056948,"start_pos":1056450,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":44,"start":26}}],"name":"tom22","ortholog_annotations":[{"gene_uniquename":"SJAG_03415","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18002","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03415","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03415","ortholog_taxonid":4932,"ortholog_uniquename":"YNL131W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03415","ortholog_taxonid":4932,"ortholog_uniquename":"YNL131W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial TOM complex subunit Tom22","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016887"]}},"subset_termids":["GO:0016887","GO:0006605","GO:0055085","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005742":null,"GO:0006886":null,"GO:0016887":null,"GO:0030150":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03415.1"],"transcripts_by_uniquename":{"SJAG_03415.1":null},"uniprot_identifier":"B6K462","uniquename":"SJAG_03415"}


id: SJAG_03416
data:
  {"cv_annotations":{"biological_process":[{"annotations":[69748],"is_not":false,"summary":null,"term":"GO:0051654"},{"annotations":[90665],"is_not":false,"summary":null,"term":"GO:0120010"},{"annotations":[69749],"is_not":false,"summary":null,"term":"GO:0070096"},{"annotations":[69745],"is_not":false,"summary":null,"term":"GO:1990456"},{"annotations":[69744],"is_not":false,"summary":null,"term":"GO:0045040"}],"cellular_component":[{"annotations":[69747],"is_not":false,"summary":null,"term":"GO:0032865"},{"annotations":[69746],"is_not":false,"summary":null,"term":"GO:0001401"}],"molecular_function":[{"annotations":[90669],"is_not":false,"summary":null,"term":"GO:0140474"},{"annotations":[90670],"is_not":false,"summary":null,"term":"GO:0120014"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03416","InterPro:IPR027539","UniProtKB/Swiss-Prot:B6K463","GOA:B6K463","EnsemblGenomes-Tr:EEB08270"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"srp21","uniquename":"SJAG_03411"},{"uniquename":"SJAG_03412"},{"name":"ebp2","uniquename":"SJAG_03413"},{"name":"pdi2","uniquename":"SJAG_03414"},{"name":"tom22","uniquename":"SJAG_03415"},{"name":"mdm10","uniquename":"SJAG_03416"},{"name":"cdt2","uniquename":"SJAG_03417"},{"name":"psc3","uniquename":"SJAG_03418"},{"uniquename":"SJAG_03419"},{"uniquename":"SJAG_03420"},{"name":"cdk11","uniquename":"SJAG_03421"}],"genes_by_uniquename":{"SJAG_03416":null,"SPAC17H9.17c":null,"YAL010C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mitochondrial distribution and morphology protein 10","id":"PF12519","interpro_description":"Mitochondrial distribution and morphology protein 10","interpro_id":"IPR027539","interpro_name":"Mdm10","locations":[{"end":110,"start":3},{"end":285,"start":128}],"match_end":285,"match_start":3,"name":"MDM10"},{"dbname":"PANTHER","id":"PTHR28035","interpro_description":"Mitochondrial distribution and morphology protein 10","interpro_id":"IPR027539","interpro_name":"Mdm10","locations":[{"end":284,"start":131}],"match_end":284,"match_start":131,"name":"MITOCHONDRIAL DISTRIBUTION AND MORPHOLOGY PROTEIN 10"},{"dbname":"HAMAP","description":"Mitochondrial distribution and morphology protein 10 [MDM10].","id":"MF_03102","interpro_description":"Mitochondrial distribution and morphology protein 10","interpro_id":"IPR027539","interpro_name":"Mdm10","locations":[{"end":320,"start":1}],"match_end":320,"match_start":1,"name":"Mdm10"}],"location":{"chromosome_name":"supercont5.2","end_pos":1058422,"start_pos":1057269,"strand":"reverse"},"name":"mdm10","ortholog_annotations":[{"gene_uniquename":"SJAG_03416","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.17c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03416","ortholog_taxonid":4932,"ortholog_uniquename":"YAL010C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03416","ortholog_taxonid":4932,"ortholog_uniquename":"YAL010C","reference_uniquename":"PMID:26896847"}],"product":"ERMES and SAM complex subunit Mdm10","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0140474","GO:0120014"]}},"subset_termids":["GO:0060090","GO:0140056","GO:0061024","GO:0120013","GO:0005739","GO:0006605","GO:0007005","GO:0005783","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001401":null,"GO:0032865":null,"GO:0045040":null,"GO:0051654":null,"GO:0070096":null,"GO:0120010":null,"GO:0120014":null,"GO:0140474":null,"GO:1990456":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03416.1"],"transcripts_by_uniquename":{"SJAG_03416.1":null},"uniprot_identifier":"B6K463","uniquename":"SJAG_03416"}


id: SJAG_03417
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78572],"is_not":false,"summary":null,"term":"GO:0043161"},{"annotations":[90674],"is_not":false,"summary":null,"term":"GO:2000779"}],"cellular_component":[{"annotations":[90671],"is_not":false,"summary":null,"term":"GO:0080008"},{"annotations":[78573],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[90676],"is_not":false,"summary":null,"term":"GO:0044877"},{"annotations":[78574],"is_not":false,"summary":null,"term":"GO:0030674"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03417","InterPro:IPR019775","InterPro:IPR036322","EnsemblGenomes-Tr:EEB08271","InterPro:IPR015943","InterPro:IPR017986","InterPro:IPR001680","UniProtKB/TrEMBL:B6K464","GOA:B6K464"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":60,"start":41}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03412"},{"name":"ebp2","uniquename":"SJAG_03413"},{"name":"pdi2","uniquename":"SJAG_03414"},{"name":"tom22","uniquename":"SJAG_03415"},{"name":"mdm10","uniquename":"SJAG_03416"},{"name":"cdt2","uniquename":"SJAG_03417"},{"name":"psc3","uniquename":"SJAG_03418"},{"uniquename":"SJAG_03419"},{"uniquename":"SJAG_03420"},{"name":"cdk11","uniquename":"SJAG_03421"},{"name":"rps16a","uniquename":"SJAG_03422"}],"genes_by_uniquename":{"HGNC:30288":null,"SJAG_03417":null,"SPAC17H9.19c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":220,"start":188},{"end":269,"start":239},{"end":379,"start":356},{"end":478,"start":449}],"match_end":478,"match_start":188,"name":"WD40"},{"dbname":"PROSITE_PATTERNS","description":"Trp-Asp (WD) repeats signature.","id":"PS00678","interpro_description":"WD40 repeat, conserved site","interpro_id":"IPR019775","interpro_name":"WD40_repeat_CS","locations":[{"end":270,"start":256}],"match_end":270,"match_start":256,"name":"WD_REPEATS_1"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":229,"start":188},{"end":272,"start":236},{"end":478,"start":447}],"match_end":478,"match_start":188,"name":"WD_REPEATS_2"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":478,"start":447}],"match_end":478,"match_start":447,"name":"WD_REPEATS_REGION"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":165,"start":129},{"end":220,"start":181},{"end":269,"start":223},{"end":329,"start":283},{"end":382,"start":344},{"end":478,"start":438}],"match_end":478,"match_start":129,"name":"WD40_4"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":488,"start":137}],"match_end":488,"match_start":137,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":498,"start":137}],"match_end":498,"match_start":137},{"dbname":"PANTHER","id":"PTHR22852","interpro_description":"WD repeat-containing CDT2 adapter protein","interpro_id":"IPR051865","interpro_name":"WD-repeat_CDT2_adapter","locations":[{"end":481,"start":28}],"match_end":481,"match_start":28,"name":"LETHAL 2 DENTICLELESS PROTEIN  RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":60,"start":41}],"match_end":60,"match_start":41,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1060342,"start_pos":1058768,"strand":"reverse"},"name":"cdt2","ortholog_annotations":[{"gene_uniquename":"SJAG_03417","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30288","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03417","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.19c","reference_uniquename":"PMID:21511999"}],"product":"WD repeat protein Cdt2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0044877"],"not-binding":["GO:0030674"]}},"subset_termids":["GO:0005634","GO:0006281","GO:0030163","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0030674":null,"GO:0043161":null,"GO:0044877":null,"GO:0080008":null,"GO:2000779":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03417.1"],"transcripts_by_uniquename":{"SJAG_03417.1":null},"uniprot_identifier":"B6K464","uniquename":"SJAG_03417"}


id: SJAG_03418
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90685],"is_not":false,"summary":null,"term":"GO:0140588"},{"annotations":[90686],"is_not":false,"summary":null,"term":"GO:0051754"},{"annotations":[90688],"is_not":false,"summary":null,"term":"GO:0071962"}],"cellular_component":[{"annotations":[90678],"is_not":false,"summary":null,"term":"GO:0000779"},{"annotations":[90679],"is_not":false,"summary":null,"term":"GO:0000794"},{"annotations":[90680],"is_not":false,"summary":null,"term":"GO:0031934"},{"annotations":[90681],"is_not":false,"summary":null,"term":"GO:0030892"},{"annotations":[90683],"is_not":false,"summary":null,"term":"GO:0005721"},{"annotations":[90684],"is_not":false,"summary":null,"term":"GO:0140720"}],"molecular_function":[{"annotations":[90689],"is_not":false,"summary":null,"term":"GO:0061776"},{"annotations":[70208],"is_not":false,"summary":null,"term":"GO:0003682"}],"mondo":[{"annotations":[85666],"is_not":false,"summary":null,"term":"MONDO:0026763"},{"annotations":[85154],"is_not":false,"summary":null,"term":"MONDO:0030912"},{"annotations":[85683],"is_not":false,"summary":null,"term":"MONDO:0026722"},{"annotations":[86372],"is_not":false,"summary":null,"term":"MONDO:0014321"},{"annotations":[85849],"is_not":false,"summary":null,"term":"MONDO:0030507"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K465","InterPro:IPR016024","InterPro:IPR039662","InterPro:IPR020839","EnsemblGenomes-Tr:EEB08272","EnsemblGenomes-Gn:SJAG_03418","GOA:B6K465","InterPro:IPR013721"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":58,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ebp2","uniquename":"SJAG_03413"},{"name":"pdi2","uniquename":"SJAG_03414"},{"name":"tom22","uniquename":"SJAG_03415"},{"name":"mdm10","uniquename":"SJAG_03416"},{"name":"cdt2","uniquename":"SJAG_03417"},{"name":"psc3","uniquename":"SJAG_03418"},{"uniquename":"SJAG_03419"},{"uniquename":"SJAG_03420"},{"name":"cdk11","uniquename":"SJAG_03421"},{"name":"rps16a","uniquename":"SJAG_03422"},{"name":"rpl13b","uniquename":"SJAG_03423"}],"genes_by_uniquename":{"HGNC:11354":null,"HGNC:11355":null,"HGNC:11356":null,"SJAG_03418":null,"SPAC17H9.20":null,"YIL026C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"STAG domain","id":"PF08514","interpro_description":"STAG","interpro_id":"IPR013721","interpro_name":"STAG","locations":[{"end":256,"start":143}],"match_end":256,"match_start":143,"name":"STAG"},{"dbname":"PFAM","description":"Cohesin subunit SCC3/SA, HEAT-repeats domain","id":"PF24571","locations":[{"end":764,"start":525}],"match_end":764,"match_start":525,"name":"HEAT_SCC3-SA"},{"dbname":"PFAM","description":"Stromalin conservative domain","id":"PF21581","interpro_description":"Stromalin conservative domain","interpro_id":"IPR020839","interpro_name":"SCD","locations":[{"end":359,"start":285}],"match_end":359,"match_start":285,"name":"SCD"},{"dbname":"PROSITE_PROFILES","description":"Stromalin conservative (SCD) domain profile.","id":"PS51425","interpro_description":"Stromalin conservative domain","interpro_id":"IPR020839","interpro_name":"SCD","locations":[{"end":365,"start":280}],"match_end":365,"match_start":280,"name":"SCD"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":221,"start":184},{"end":433,"start":264},{"end":670,"start":587}],"match_end":670,"match_start":184,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":444,"start":262}],"match_end":444,"match_start":262},{"dbname":"PANTHER","id":"PTHR11199","interpro_description":"Cohesin subunit Scc3/SA","interpro_id":"IPR039662","interpro_name":"Cohesin_Scc3/SA","locations":[{"end":866,"start":6}],"match_end":866,"match_start":6,"name":"STROMAL ANTIGEN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":58,"start":1}],"match_end":58,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":48,"start":34}],"match_end":48,"match_start":34,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1064039,"start_pos":1061060,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":29,"start":10}},{"range":{"end":61,"start":51}},{"range":{"end":261,"start":242}},{"range":{"end":405,"start":389}},{"range":{"end":525,"start":514}},{"range":{"end":630,"start":608}},{"range":{"end":887,"start":876}}],"name":"psc3","ortholog_annotations":[{"gene_uniquename":"SJAG_03418","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11354","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03418","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11355","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03418","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11356","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03418","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.20","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03418","ortholog_taxonid":4932,"ortholog_uniquename":"YIL026C","reference_uniquename":"PMID:29761456"}],"product":"mitotic cohesin complex, STAG protein subunit Psc3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0061776","GO:0003682"]}},"subset_termids":["GO:0061776","MONDO:0005047","GO:0005634","GO:0005694","MONDO:0002320","GO:0006325","MONDO:0000426"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000779":null,"GO:0000794":null,"GO:0003682":null,"GO:0005721":null,"GO:0030892":null,"GO:0031934":null,"GO:0051754":null,"GO:0061776":null,"GO:0071962":null,"GO:0140588":null,"GO:0140720":null,"MONDO:0014321":null,"MONDO:0026722":null,"MONDO:0026763":null,"MONDO:0030507":null,"MONDO:0030912":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03418.1"],"transcripts_by_uniquename":{"SJAG_03418.1":null},"uniprot_identifier":"B6K465","uniquename":"SJAG_03418"}


id: SJAG_03419
data:
  {"coiled_coil_coords":[{"range":{"end":62,"start":42}},{"range":{"end":132,"start":105}}],"cv_annotations":{"cellular_component":[{"annotations":[98542],"is_not":false,"summary":null,"term":"GO:0005730"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08273","UniProtKB/TrEMBL:B6K466","EnsemblGenomes-Gn:SJAG_03419","InterPro:IPR038871"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":32,"start":1}},{"range":{"end":198,"start":104}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pdi2","uniquename":"SJAG_03414"},{"name":"tom22","uniquename":"SJAG_03415"},{"name":"mdm10","uniquename":"SJAG_03416"},{"name":"cdt2","uniquename":"SJAG_03417"},{"name":"psc3","uniquename":"SJAG_03418"},{"uniquename":"SJAG_03419"},{"uniquename":"SJAG_03420"},{"name":"cdk11","uniquename":"SJAG_03421"},{"name":"rps16a","uniquename":"SJAG_03422"},{"name":"rpl13b","uniquename":"SJAG_03423"},{"name":"rps14b","uniquename":"SJAG_03424"}],"genes_by_uniquename":{"HGNC:33451":null,"SJAG_03419":null,"SPAC607.02c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PANTHER","id":"PTHR40644","interpro_description":"UPF0653 protein C607.02c-like","interpro_id":"IPR038871","interpro_name":"C607.02c-like","locations":[{"end":225,"start":2}],"match_end":225,"match_start":2,"name":"UPF0653 PROTEIN C607.02C"},{"dbname":"COILS","id":"Coil","locations":[{"end":62,"start":42},{"end":132,"start":105}],"match_end":132,"match_start":42,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":32,"start":1},{"end":198,"start":104}],"match_end":198,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":131,"start":118}],"match_end":131,"match_start":118,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":20,"start":11}],"match_end":20,"match_start":11,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":10,"start":1}],"match_end":10,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1064874,"start_pos":1064105,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":16,"start":3}},{"range":{"end":127,"start":101}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03419","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:33451","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03419","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC607.02c","reference_uniquename":"PMID:21511999"}],"product":"conserved nucleolar protein, human CCDC137 ortholog, implicated in rDNA metabolism or ribosome biogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03419.1"],"transcripts_by_uniquename":{"SJAG_03419.1":null},"uniprot_identifier":"B6K466","uniquename":"SJAG_03419"}


id: SJAG_03420
data:
  {"cv_annotations":{"molecular_function":[{"annotations":[60081],"is_not":false,"summary":null,"term":"GO:0004190"}]},"dbxrefs":["InterPro:IPR001969","UniProtKB/TrEMBL:B6K467","GOA:B6K467","InterPro:IPR021109","EnsemblGenomes-Gn:SJAG_03420","EnsemblGenomes-Tr:EEB08274"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tom22","uniquename":"SJAG_03415"},{"name":"mdm10","uniquename":"SJAG_03416"},{"name":"cdt2","uniquename":"SJAG_03417"},{"name":"psc3","uniquename":"SJAG_03418"},{"uniquename":"SJAG_03419"},{"uniquename":"SJAG_03420"},{"name":"cdk11","uniquename":"SJAG_03421"},{"name":"rps16a","uniquename":"SJAG_03422"},{"name":"rpl13b","uniquename":"SJAG_03423"},{"name":"rps14b","uniquename":"SJAG_03424"},{"name":"rpl701","uniquename":"SJAG_03425"}],"genes_by_uniquename":{"SJAG_03420":null},"has_protein_features":true,"interpro_matches":[{"dbname":"CDD","description":"retropepsin_like","id":"cd00303","locations":[{"end":348,"start":278}],"match_end":348,"match_start":278,"name":"retropepsin_like"},{"dbname":"PROSITE_PATTERNS","description":"Eukaryotic and viral aspartyl proteases active site.","id":"PS00141","interpro_description":"Aspartic peptidase, active site","interpro_id":"IPR001969","interpro_name":"Aspartic_peptidase_AS","locations":[{"end":292,"start":281}],"match_end":292,"match_start":281,"name":"ASP_PROTEASE"},{"dbname":"SUPERFAMILY","id":"SSF50630","interpro_description":"Aspartic peptidase domain superfamily","interpro_id":"IPR021109","interpro_name":"Peptidase_aspartic_dom_sf","locations":[{"end":343,"start":277}],"match_end":343,"match_start":277,"name":"Acid proteases"},{"dbname":"GENE3D","id":"G3DSA:2.40.70.10","interpro_description":"Aspartic peptidase domain superfamily","interpro_id":"IPR021109","interpro_name":"Peptidase_aspartic_dom_sf","locations":[{"end":352,"start":274}],"match_end":352,"match_start":274,"name":"Acid Proteases"}],"location":{"chromosome_name":"supercont5.2","end_pos":1066163,"start_pos":1065099,"strand":"reverse"},"product":"aspartic peptidase domain superfamily","references_by_uniquename":{"GO_REF:0000002":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004190"]}},"subset_termids":["GO:0008233","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004190":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03420.1"],"transcripts_by_uniquename":{"SJAG_03420.1":null},"uniprot_identifier":"B6K467","uniquename":"SJAG_03420"}


id: SJAG_03421
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105456],"is_not":false,"summary":null,"term":"GO:2001178"},{"annotations":[105457],"is_not":false,"summary":null,"term":"GO:0060261"},{"annotations":[105458],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[105453],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[105454],"is_not":false,"summary":null,"term":"GO:0000307"},{"annotations":[70745],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[58339],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[58340],"is_not":false,"summary":null,"term":"GO:0004693"}]},"dbxrefs":["GOA:B6K468","InterPro:IPR000719","UniProtKB/TrEMBL:B6K468","InterPro:IPR011009","EnsemblGenomes-Tr:EEB08275","EnsemblGenomes-Gn:SJAG_03421","InterPro:IPR008271"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":401,"start":355}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mdm10","uniquename":"SJAG_03416"},{"name":"cdt2","uniquename":"SJAG_03417"},{"name":"psc3","uniquename":"SJAG_03418"},{"uniquename":"SJAG_03419"},{"uniquename":"SJAG_03420"},{"name":"cdk11","uniquename":"SJAG_03421"},{"name":"rps16a","uniquename":"SJAG_03422"},{"name":"rpl13b","uniquename":"SJAG_03423"},{"name":"rps14b","uniquename":"SJAG_03424"},{"name":"rpl701","uniquename":"SJAG_03425"},{"name":"ppr2","uniquename":"SJAG_03426"}],"genes_by_uniquename":{"HGNC:1729":null,"HGNC:1730":null,"SJAG_03421":null,"SPBC18H10.15":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":358,"start":71}],"match_end":358,"match_start":71,"name":"Pkinase"},{"dbname":"CDD","description":"STKc_CDC2L1","id":"cd07843","interpro_description":"Cyclin-dependent kinase 11/PITSLRE, catalytic domain","interpro_id":"IPR045267","interpro_name":"CDK11/PITSLRE_STKc","locations":[{"end":358,"start":65}],"match_end":358,"match_start":65,"name":"STKc_CDC2L1"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":204,"start":192}],"match_end":204,"match_start":192,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":358,"start":71}],"match_end":358,"match_start":71,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":358,"start":71}],"match_end":358,"match_start":71,"name":"serkin_6"},{"dbname":"FUNFAM","description":"Cyclin-dependent kinase 11B","id":"G3DSA:3.30.200.20:FF:000054","locations":[{"end":154,"start":58}],"match_end":154,"match_start":58},{"dbname":"FUNFAM","description":"Cyclin-dependent kinase G-2","id":"G3DSA:1.10.510.10:FF:000211","locations":[{"end":389,"start":155}],"match_end":389,"match_start":155},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":364,"start":64}],"match_end":364,"match_start":64,"name":"Protein kinase-like (PK-like)"},{"dbname":"GENE3D","id":"G3DSA:3.30.200.20","locations":[{"end":154,"start":56}],"match_end":154,"match_start":56,"name":"Phosphorylase Kinase; domain 1"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":396,"start":155}],"match_end":396,"match_start":155,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"PANTHER","id":"PTHR24056","interpro_description":"Cyclin-dependent kinase","interpro_id":"IPR050108","interpro_name":"CDK","locations":[{"end":362,"start":68}],"match_end":362,"match_start":68,"name":"CELL DIVISION PROTEIN KINASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":401,"start":355}],"match_end":401,"match_start":355,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":395,"start":377}],"match_end":395,"match_start":377,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1069258,"start_pos":1067983,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":43,"start":19}}],"name":"cdk11","ortholog_annotations":[{"gene_uniquename":"SJAG_03421","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1729","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03421","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1730","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03421","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.15","reference_uniquename":"PMID:21511999"}],"product":"Cdk11-cyclinL compex kinase subunit Cdk11","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004693"]}},"subset_termids":["GO:0006355","GO:0023052","GO:0005694","GO:0016301","GO:0140096","GO:0006351","GO:0065003","GO:0005634","GO:0004672"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000307":null,"GO:0000785":null,"GO:0004693":null,"GO:0005524":null,"GO:0005634":null,"GO:0023052":null,"GO:0060261":null,"GO:2001178":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03421.1"],"transcripts_by_uniquename":{"SJAG_03421.1":null},"uniprot_identifier":"B6K468","uniquename":"SJAG_03421"}


id: SJAG_03422
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105446],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[80055],"is_not":false,"summary":null,"term":"GO:0000462"}],"cellular_component":[{"annotations":[80054],"is_not":false,"summary":null,"term":"GO:0022627"}],"molecular_function":[{"annotations":[80052],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[80053],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR020574","InterPro:IPR000754","InterPro:IPR020568","EnsemblGenomes-Tr:EEB08276","EnsemblGenomes-Gn:SJAG_03422","InterPro:IPR014721","GOA:B6K469","UniProtKB/TrEMBL:B6K469"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":140,"start":120}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cdt2","uniquename":"SJAG_03417"},{"name":"psc3","uniquename":"SJAG_03418"},{"uniquename":"SJAG_03419"},{"uniquename":"SJAG_03420"},{"name":"cdk11","uniquename":"SJAG_03421"},{"name":"rps16a","uniquename":"SJAG_03422"},{"name":"rpl13b","uniquename":"SJAG_03423"},{"name":"rps14b","uniquename":"SJAG_03424"},{"name":"rpl701","uniquename":"SJAG_03425"},{"name":"ppr2","uniquename":"SJAG_03426"},{"name":"saf4","uniquename":"SJAG_03427"}],"genes_by_uniquename":{"HGNC:10396":null,"SJAG_03422":null,"SPAC664.04c":null,"SPBC18H10.14":null,"YDL083C":null,"YMR143W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein S9/S16","id":"PF00380","interpro_description":"Small ribosomal subunit protein uS9","interpro_id":"IPR000754","interpro_name":"Ribosomal_uS9","locations":[{"end":140,"start":8}],"match_end":140,"match_start":8,"name":"Ribosomal_S9"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein S9 signature.","id":"PS00360","interpro_description":"Small ribosomal subunit protein uS9, conserved site","interpro_id":"IPR020574","interpro_name":"Ribosomal_uS9_CS","locations":[{"end":86,"start":68}],"match_end":86,"match_start":68,"name":"RIBOSOMAL_S9"},{"dbname":"FUNFAM","description":"40S ribosomal protein S16","id":"G3DSA:3.30.230.10:FF:000007","locations":[{"end":140,"start":1}],"match_end":140,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF54211","interpro_description":"Ribosomal protein uS5 domain 2-type superfamily","interpro_id":"IPR020568","interpro_name":"Ribosomal_Su5_D2-typ_SF","locations":[{"end":140,"start":3}],"match_end":140,"match_start":3,"name":"Ribosomal protein S5 domain 2-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.230.10","interpro_description":"Small ribosomal subunit protein uS5 domain 2-type fold, subgroup","interpro_id":"IPR014721","interpro_name":"Ribsml_uS5_D2-typ_fold_subgr","locations":[{"end":140,"start":1}],"match_end":140,"match_start":1},{"dbname":"PANTHER","id":"PTHR21569","interpro_description":"Small ribosomal subunit protein uS9","interpro_id":"IPR000754","interpro_name":"Ribosomal_uS9","locations":[{"end":136,"start":2}],"match_end":136,"match_start":2,"name":"RIBOSOMAL PROTEIN S9"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":140,"start":120}],"match_end":140,"match_start":120,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":140,"start":131}],"match_end":140,"match_start":131,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1069889,"start_pos":1069467,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":72,"start":59}}],"name":"rps16a","ortholog_annotations":[{"gene_uniquename":"SJAG_03422","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10396","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03422","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10396","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03422","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC664.04c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03422","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.14","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03422","ortholog_taxonid":4932,"ortholog_uniquename":"YDL083C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03422","ortholog_taxonid":4932,"ortholog_uniquename":"YDL083C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03422","ortholog_taxonid":4932,"ortholog_uniquename":"YMR143W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03422","ortholog_taxonid":4932,"ortholog_uniquename":"YMR143W","reference_uniquename":"PMID:29761456"}],"product":"40S ribosomal protein S16","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0002181","GO:0042254","GO:0005829","GO:0022626"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000462":null,"GO:0002181":null,"GO:0003723":null,"GO:0003735":null,"GO:0022627":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03422.1"],"transcripts_by_uniquename":{"SJAG_03422.1":null},"uniprot_identifier":"B6K469","uniquename":"SJAG_03422"}


id: SJAG_03423
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98930],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[98926],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[98928],"is_not":false,"summary":null,"term":"GO:0030684"}],"molecular_function":[{"annotations":[98932],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[98934],"is_not":false,"summary":null,"term":"GO:0003735"}],"mondo":[{"annotations":[86573],"is_not":false,"summary":null,"term":"MONDO:0032885"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03423","InterPro:IPR018256","EnsemblGenomes-Tr:EEB08277","InterPro:IPR001380","UniProtKB/TrEMBL:B6JYE7","GOA:B6JYE7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"psc3","uniquename":"SJAG_03418"},{"uniquename":"SJAG_03419"},{"uniquename":"SJAG_03420"},{"name":"cdk11","uniquename":"SJAG_03421"},{"name":"rps16a","uniquename":"SJAG_03422"},{"name":"rpl13b","uniquename":"SJAG_03423"},{"name":"rps14b","uniquename":"SJAG_03424"},{"name":"rpl701","uniquename":"SJAG_03425"},{"name":"ppr2","uniquename":"SJAG_03426"},{"name":"saf4","uniquename":"SJAG_03427"},{"uniquename":"SJAG_03428"}],"genes_by_uniquename":{"HGNC:10303":null,"SJAG_03423":null,"SPAC664.05":null,"YDL082W":null,"YMR142C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L13e","id":"PF01294","interpro_description":"Large ribosomal subunit protein eL13","interpro_id":"IPR001380","interpro_name":"Ribosomal_eL13","locations":[{"end":183,"start":8}],"match_end":183,"match_start":8,"name":"Ribosomal_L13e"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L13e signature.","id":"PS01104","interpro_description":"Large ribosomal subunit protein eL13, conserved site","interpro_id":"IPR018256","interpro_name":"Ribosomal_eL13_CS","locations":[{"end":84,"start":70}],"match_end":84,"match_start":70,"name":"RIBOSOMAL_L13E"},{"dbname":"FUNFAM","description":"60S ribosomal protein L13","id":"G3DSA:1.20.5.110:FF:000003","locations":[{"end":208,"start":163}],"match_end":208,"match_start":163},{"dbname":"GENE3D","id":"G3DSA:1.20.5.110","locations":[{"end":208,"start":163}],"match_end":208,"match_start":163},{"dbname":"PANTHER","id":"PTHR11722","interpro_description":"Large ribosomal subunit protein eL13","interpro_id":"IPR001380","interpro_name":"Ribosomal_eL13","locations":[{"end":207,"start":1}],"match_end":207,"match_start":1,"name":"60S RIBOSOMAL PROTEIN L13"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein eL13 [rpl13e].","id":"MF_00499","interpro_description":"Large ribosomal subunit protein eL13","interpro_id":"IPR001380","interpro_name":"Ribosomal_eL13","locations":[{"end":128,"start":46}],"match_end":128,"match_start":46,"name":"Ribosomal_eL13"}],"location":{"chromosome_name":"supercont5.2","end_pos":1070673,"start_pos":1070047,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":46,"start":30}},{"range":{"end":139,"start":128}},{"range":{"end":171,"start":160}},{"range":{"end":207,"start":181}}],"name":"rpl13b","ortholog_annotations":[{"gene_uniquename":"SJAG_03423","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10303","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03423","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC664.05","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03423","ortholog_taxonid":4932,"ortholog_uniquename":"YDL082W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03423","ortholog_taxonid":4932,"ortholog_uniquename":"YMR142C","reference_uniquename":"PMID:29761456"}],"product":"60S ribosomal protein L13","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005829","GO:0022626","MONDO:0005497","GO:0005198","GO:0002181","GO:0030684"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003723":null,"GO:0003735":null,"GO:0022625":null,"GO:0030684":null,"MONDO:0032885":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03423.1"],"transcripts_by_uniquename":{"SJAG_03423.1":null},"uniprot_identifier":"B6JYE7","uniquename":"SJAG_03423"}


id: SJAG_03424
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105438],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[74553],"is_not":false,"summary":null,"term":"GO:0000028"}],"cellular_component":[{"annotations":[105430],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[74554],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[105434],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[74551],"is_not":false,"summary":null,"term":"GO:0003735"}],"mondo":[{"annotations":[85493],"is_not":false,"summary":null,"term":"MONDO:0007925"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08278","InterPro:IPR001971","EnsemblGenomes-Gn:SJAG_03424","InterPro:IPR018102","InterPro:IPR036967","GOA:B6K471","UniProtKB/TrEMBL:B6K471"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":139,"start":120}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03419"},{"uniquename":"SJAG_03420"},{"name":"cdk11","uniquename":"SJAG_03421"},{"name":"rps16a","uniquename":"SJAG_03422"},{"name":"rpl13b","uniquename":"SJAG_03423"},{"name":"rps14b","uniquename":"SJAG_03424"},{"name":"rpl701","uniquename":"SJAG_03425"},{"name":"ppr2","uniquename":"SJAG_03426"},{"name":"saf4","uniquename":"SJAG_03427"},{"uniquename":"SJAG_03428"},{"name":"ubp4","uniquename":"SJAG_03429"}],"genes_by_uniquename":{"HGNC:10387":null,"SJAG_03424":null,"SPAC3H5.05c":null,"SPBC18H10.13":null,"YCR031C":null,"YJL191W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein S11","id":"PF00411","interpro_description":"Small ribosomal subunit protein uS11","interpro_id":"IPR001971","interpro_name":"Ribosomal_uS11","locations":[{"end":135,"start":17}],"match_end":135,"match_start":17,"name":"Ribosomal_S11"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein S11 signature.","id":"PS00054","interpro_description":"Small ribosomal subunit protein uS11, conserved site","interpro_id":"IPR018102","interpro_name":"Ribosomal_uS11_CS","locations":[{"end":126,"start":104}],"match_end":126,"match_start":104,"name":"RIBOSOMAL_S11"},{"dbname":"FUNFAM","description":"40S ribosomal protein S14","id":"G3DSA:3.30.420.80:FF:000002","locations":[{"end":139,"start":1}],"match_end":139,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF53137","locations":[{"end":137,"start":12}],"match_end":137,"match_start":12,"name":"Translational machinery components"},{"dbname":"GENE3D","id":"G3DSA:3.30.420.80","interpro_description":"Small ribosomal subunit protein uS11 superfamily","interpro_id":"IPR036967","interpro_name":"Ribosomal_uS11_sf","locations":[{"end":139,"start":1}],"match_end":139,"match_start":1,"name":"Ribosomal protein S11"},{"dbname":"PANTHER","id":"PTHR11759","interpro_description":"Small ribosomal subunit protein uS11","interpro_id":"IPR001971","interpro_name":"Ribosomal_uS11","locations":[{"end":135,"start":6}],"match_end":135,"match_start":6,"name":"40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11"},{"dbname":"PIRSF","id":"PIRSF002131","interpro_description":"Small ribosomal subunit protein uS11","interpro_id":"IPR001971","interpro_name":"Ribosomal_uS11","locations":[{"end":136,"start":3}],"match_end":136,"match_start":3,"name":"RPS11p_RPS11a_RPS14e_RPS11o"},{"dbname":"HAMAP","description":"Small ribosomal subunit protein uS11 [rpsK].","id":"MF_01310","interpro_description":"Small ribosomal subunit protein uS11","interpro_id":"IPR001971","interpro_name":"Ribosomal_uS11","locations":[{"end":136,"start":10}],"match_end":136,"match_start":10,"name":"Ribosomal_S11"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":139,"start":120}],"match_end":139,"match_start":120,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":139,"start":130}],"match_end":139,"match_start":130,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1071539,"start_pos":1071120,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":116,"start":86}},{"range":{"end":137,"start":128}}],"name":"rps14b","ortholog_annotations":[{"gene_uniquename":"SJAG_03424","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10387","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03424","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10387","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03424","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H5.05c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03424","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.13","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03424","ortholog_taxonid":4932,"ortholog_uniquename":"YCR031C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03424","ortholog_taxonid":4932,"ortholog_uniquename":"YCR031C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03424","ortholog_taxonid":4932,"ortholog_uniquename":"YJL191W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03424","ortholog_taxonid":4932,"ortholog_uniquename":"YJL191W","reference_uniquename":"PMID:29761456"}],"product":"40S ribosomal protein S14","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005730","GO:0065003","GO:0042254","GO:0022626","MONDO:0005570","GO:0005634","GO:0005829","MONDO:0002280","GO:0005198","GO:0002181","GO:0010494"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000028":null,"GO:0002181":null,"GO:0003735":null,"GO:0005730":null,"GO:0010494":null,"GO:0022627":null,"MONDO:0007925":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03424.1"],"transcripts_by_uniquename":{"SJAG_03424.1":null},"uniprot_identifier":"B6K471","uniquename":"SJAG_03424"}


id: SJAG_03425
data:
  {"cv_annotations":{"biological_process":[{"annotations":[97200],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[105419],"is_not":false,"summary":null,"term":"GO:0000447"},{"annotations":[70906],"is_not":false,"summary":null,"term":"GO:0000463"},{"annotations":[105423],"is_not":false,"summary":null,"term":"GO:0008033"}],"cellular_component":[{"annotations":[105409],"is_not":false,"summary":null,"term":"GO:0022625"},{"annotations":[105411],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[105415],"is_not":false,"summary":null,"term":"GO:0030684"},{"annotations":[105417],"is_not":false,"summary":null,"term":"GO:0000172"}],"molecular_function":[{"annotations":[105425],"is_not":false,"summary":null,"term":"GO:0000171"},{"annotations":[70905],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[97206],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["InterPro:IPR036919","InterPro:IPR039699","UniProtKB/TrEMBL:B6K472","EnsemblGenomes-Gn:SJAG_03425","GOA:B6K472","EnsemblGenomes-Tr:EEB08279","InterPro:IPR005998","InterPro:IPR012988","InterPro:IPR016082","InterPro:IPR018038","InterPro:IPR023106","InterPro:IPR035808"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03420"},{"name":"cdk11","uniquename":"SJAG_03421"},{"name":"rps16a","uniquename":"SJAG_03422"},{"name":"rpl13b","uniquename":"SJAG_03423"},{"name":"rps14b","uniquename":"SJAG_03424"},{"name":"rpl701","uniquename":"SJAG_03425"},{"name":"ppr2","uniquename":"SJAG_03426"},{"name":"saf4","uniquename":"SJAG_03427"},{"uniquename":"SJAG_03428"},{"name":"ubp4","uniquename":"SJAG_03429"},{"name":"wbp4","uniquename":"SJAG_03430"}],"genes_by_uniquename":{"HGNC:10363":null,"SJAG_03425":null,"SPAC3H5.07":null,"SPBC18H10.12c":null,"YGL076C":null,"YPL198W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal L30 N-terminal domain","id":"PF08079","interpro_description":"Large ribosomal subunit protein uL30, N-terminal, eukaryotes","interpro_id":"IPR012988","interpro_name":"Ribosomal_uL30_N_euk","locations":[{"end":87,"start":16}],"match_end":87,"match_start":16,"name":"Ribosomal_L30_N"},{"dbname":"PFAM","description":"Ribosomal protein L30p/L7e","id":"PF00327","interpro_description":"Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain","interpro_id":"IPR016082","interpro_name":"Ribosomal_uL30_ferredoxin-like","locations":[{"end":142,"start":92}],"match_end":142,"match_start":92,"name":"Ribosomal_L30"},{"dbname":"CDD","description":"Ribosomal_L7_archeal_euk","id":"cd01657","interpro_description":"Large ribosomal subunit protein uL30, eukaryotic/archaeal","interpro_id":"IPR035808","interpro_name":"Ribosomal_uL30_euk_arc","locations":[{"end":251,"start":91}],"match_end":251,"match_start":91,"name":"Ribosomal_L7_archeal_euk"},{"dbname":"PROSITE_PATTERNS","description":"Ribosomal protein L30 signature.","id":"PS00634","interpro_description":"Large ribosomal subunit protein uL30, conserved site","interpro_id":"IPR018038","interpro_name":"Ribosomal_uL30_CS","locations":[{"end":142,"start":110}],"match_end":142,"match_start":110,"name":"RIBOSOMAL_L30"},{"dbname":"FUNFAM","description":"60S ribosomal protein L7","id":"G3DSA:3.30.1390.20:FF:000003","locations":[{"end":195,"start":91}],"match_end":195,"match_start":91},{"dbname":"FUNFAM","description":"60S ribosomal protein L7","id":"G3DSA:3.30.1390.20:FF:000002","locations":[{"end":251,"start":196}],"match_end":251,"match_start":196},{"dbname":"SUPERFAMILY","id":"SSF55129","interpro_description":"Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily","interpro_id":"IPR036919","interpro_name":"Ribo_uL30_ferredoxin-like_sf","locations":[{"end":250,"start":91}],"match_end":250,"match_start":91,"name":"Ribosomal protein L30p/L7e"},{"dbname":"GENE3D","id":"G3DSA:3.30.1390.20","interpro_description":"Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily","interpro_id":"IPR036919","interpro_name":"Ribo_uL30_ferredoxin-like_sf","locations":[{"end":250,"start":91}],"match_end":250,"match_start":91},{"dbname":"PANTHER","id":"PTHR11524","interpro_description":"Large ribosomal subunit protein uL30","interpro_id":"IPR039699","interpro_name":"Ribosomal_uL30","locations":[{"end":250,"start":13}],"match_end":250,"match_start":13,"name":"60S RIBOSOMAL PROTEIN L7"},{"dbname":"NCBIFAM","description":"60S ribosomal protein uL30","id":"TIGR01310","interpro_description":"Large ribosomal subunit protein uL30, eukaryotic","interpro_id":"IPR005998","interpro_name":"Ribosomal_uL30_euk","locations":[{"end":251,"start":17}],"match_end":251,"match_start":17,"name":"uL30_euk"}],"location":{"chromosome_name":"supercont5.2","end_pos":1072774,"start_pos":1071705,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":47,"start":35}}],"name":"rpl701","ortholog_annotations":[{"gene_uniquename":"SJAG_03425","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10363","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03425","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10363","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03425","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC3H5.07","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03425","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03425","ortholog_taxonid":4932,"ortholog_uniquename":"YGL076C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03425","ortholog_taxonid":4932,"ortholog_uniquename":"YGL076C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03425","ortholog_taxonid":4932,"ortholog_uniquename":"YGL076C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03425","ortholog_taxonid":4932,"ortholog_uniquename":"YPL198W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03425","ortholog_taxonid":4932,"ortholog_uniquename":"YPL198W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03425","ortholog_taxonid":4932,"ortholog_uniquename":"YPL198W","reference_uniquename":"PMID:26896847"}],"product":"RNase MRP subunit, ribosomal protein L7-like Rpl701","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0000171","GO:0003735"]}},"subset_termids":["GO:0006399","GO:0140098","GO:0002181","GO:0042254","GO:0005730","GO:0016788","GO:0005198","GO:0005829","GO:0030684","GO:0022626","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000171":null,"GO:0000172":null,"GO:0000447":null,"GO:0000463":null,"GO:0002181":null,"GO:0003723":null,"GO:0003735":null,"GO:0005730":null,"GO:0008033":null,"GO:0022625":null,"GO:0030684":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03425.1"],"transcripts_by_uniquename":{"SJAG_03425.1":null},"uniprot_identifier":"B6K472","uniquename":"SJAG_03425"}


id: SJAG_03426
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105408],"is_not":false,"summary":null,"term":"GO:0140053"}],"cellular_component":[{"annotations":[105406],"is_not":false,"summary":null,"term":"GO:0005759"}]},"dbxrefs":["InterPro:IPR002885","UniProtKB/TrEMBL:B6K473","EnsemblGenomes-Gn:SJAG_03426","EnsemblGenomes-Tr:EEB08280","InterPro:IPR011990"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cdk11","uniquename":"SJAG_03421"},{"name":"rps16a","uniquename":"SJAG_03422"},{"name":"rpl13b","uniquename":"SJAG_03423"},{"name":"rps14b","uniquename":"SJAG_03424"},{"name":"rpl701","uniquename":"SJAG_03425"},{"name":"ppr2","uniquename":"SJAG_03426"},{"name":"saf4","uniquename":"SJAG_03427"},{"uniquename":"SJAG_03428"},{"name":"ubp4","uniquename":"SJAG_03429"},{"name":"wbp4","uniquename":"SJAG_03430"},{"name":"swd2","uniquename":"SJAG_03431"}],"genes_by_uniquename":{"SJAG_03426":null,"SPBC18H10.11c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PPR repeat family","id":"PF13041","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":139,"start":92}],"match_end":139,"match_start":92,"name":"PPR_2"},{"dbname":"PROSITE_PROFILES","description":"Pentatricopeptide (PPR) repeat profile.","id":"PS51375","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":127,"start":93}],"match_end":127,"match_start":93,"name":"PPR"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":251,"start":62}],"match_end":251,"match_start":62,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR47941","locations":[{"end":245,"start":69}],"match_end":245,"match_start":69,"name":"PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL"},{"dbname":"NCBIFAM","description":"pentatricopeptide repeat","id":"TIGR00756","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":128,"start":95}],"match_end":128,"match_start":95,"name":"PPR"}],"location":{"chromosome_name":"supercont5.2","end_pos":1074556,"start_pos":1073273,"strand":"forward"},"name":"ppr2","ortholog_annotations":[{"gene_uniquename":"SJAG_03426","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.11c","reference_uniquename":"PMID:21511999"}],"product":"mitochondrial PPR repeat protein Ppr2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{},"subset_termids":["GO:0140053","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005759":null,"GO:0140053":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03426.1"],"transcripts_by_uniquename":{"SJAG_03426.1":null},"uniprot_identifier":"B6K473","uniquename":"SJAG_03426"}


id: SJAG_03427
data:
  {"cv_annotations":{"biological_process":[{"annotations":[67035],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[78063],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[78062],"is_not":false,"summary":null,"term":"GO:0005684"}]},"dbxrefs":["GOA:B6K474","UniProtKB/TrEMBL:B6K474","EnsemblGenomes-Gn:SJAG_03427","EnsemblGenomes-Tr:EEB08281","InterPro:IPR007590"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":277,"start":244}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rps16a","uniquename":"SJAG_03422"},{"name":"rpl13b","uniquename":"SJAG_03423"},{"name":"rps14b","uniquename":"SJAG_03424"},{"name":"rpl701","uniquename":"SJAG_03425"},{"name":"ppr2","uniquename":"SJAG_03426"},{"name":"saf4","uniquename":"SJAG_03427"},{"uniquename":"SJAG_03428"},{"name":"ubp4","uniquename":"SJAG_03429"},{"name":"wbp4","uniquename":"SJAG_03430"},{"name":"swd2","uniquename":"SJAG_03431"},{"uniquename":"SJAG_03432"}],"genes_by_uniquename":{"HGNC:25518":null,"SJAG_03427":null,"SPBC18H10.10c":null,"YKL095W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Saf4/Yju2 protein","id":"PF04502","interpro_description":"Saf4/Yju2 protein","interpro_id":"IPR007590","interpro_name":"Saf4/Yju2","locations":[{"end":258,"start":14}],"match_end":258,"match_start":14,"name":"Saf4_Yju2"},{"dbname":"PANTHER","id":"PTHR12111","interpro_description":"Saf4/Yju2 protein","interpro_id":"IPR007590","interpro_name":"Saf4/Yju2","locations":[{"end":259,"start":3}],"match_end":259,"match_start":3,"name":"SPLICING FACTOR YJU2"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":277,"start":244}],"match_end":277,"match_start":244,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":269,"start":258}],"match_end":269,"match_start":258,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1075689,"start_pos":1074737,"strand":"forward"},"name":"saf4","ortholog_annotations":[{"gene_uniquename":"SJAG_03427","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25518","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03427","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03427","ortholog_taxonid":4932,"ortholog_uniquename":"YKL095W","reference_uniquename":"PMID:26896847"}],"product":"splicing associated factor Saf4","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005684":null,"GO:0045292":null,"GO:0071014":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03427.1"],"transcripts_by_uniquename":{"SJAG_03427.1":null},"uniprot_identifier":"B6K474","uniquename":"SJAG_03427"}


id: SJAG_03428
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105399],"is_not":false,"summary":null,"term":"GO:0072344"}],"molecular_function":[{"annotations":[65058],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR037274","EnsemblGenomes-Tr:EEB08282","GOA:B6K475","InterPro:IPR008913","EnsemblGenomes-Gn:SJAG_03428","UniProtKB/TrEMBL:B6K475"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":213,"start":180}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl13b","uniquename":"SJAG_03423"},{"name":"rps14b","uniquename":"SJAG_03424"},{"name":"rpl701","uniquename":"SJAG_03425"},{"name":"ppr2","uniquename":"SJAG_03426"},{"name":"saf4","uniquename":"SJAG_03427"},{"uniquename":"SJAG_03428"},{"name":"ubp4","uniquename":"SJAG_03429"},{"name":"wbp4","uniquename":"SJAG_03430"},{"name":"swd2","uniquename":"SJAG_03431"},{"uniquename":"SJAG_03432"},{"name":"sce3","uniquename":"SJAG_03433"}],"genes_by_uniquename":{"HGNC:17479":null,"SJAG_03428":null,"SPBC18H10.09":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CHY zinc finger","id":"PF05495","interpro_description":"Zinc finger, CHY-type","interpro_id":"IPR008913","interpro_name":"Znf_CHY","locations":[{"end":448,"start":387}],"match_end":448,"match_start":387,"name":"zf-CHY"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger CHY-type profile.","id":"PS51266","interpro_description":"Zinc finger, CHY-type","interpro_id":"IPR008913","interpro_name":"Znf_CHY","locations":[{"end":448,"start":380}],"match_end":448,"match_start":380,"name":"ZF_CHY"},{"dbname":"SUPERFAMILY","id":"SSF161219","interpro_description":"Zinc finger, CHY-type superfamily","interpro_id":"IPR037274","interpro_name":"Znf_CHY_sf","locations":[{"end":448,"start":377}],"match_end":448,"match_start":377,"name":"CHY zinc finger-like"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":213,"start":180}],"match_end":213,"match_start":180,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":200,"start":184}],"match_end":200,"match_start":184,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1077257,"start_pos":1075701,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":140,"start":131}},{"range":{"end":198,"start":182}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03428","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17479","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03428","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.09","reference_uniquename":"PMID:21511999"}],"product":"zf-CHY type zinc finger protein involved in rescue of stalled ribosomes","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"]}},"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0008270":null,"GO:0072344":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03428.1"],"transcripts_by_uniquename":{"SJAG_03428.1":null},"uniprot_identifier":"B6K475","uniquename":"SJAG_03428"}


id: SJAG_03429
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[105394],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[105396],"is_not":false,"summary":null,"term":"GO:0005768"}],"molecular_function":[{"annotations":[65730],"is_not":false,"summary":null,"term":"GO:0004843"},{"annotations":[105398],"is_not":false,"summary":null,"term":"GO:0140492"}],"mondo":[{"annotations":[86502],"is_not":false,"summary":null,"term":"MONDO:0009050"}]},"dbxrefs":["InterPro:IPR038765","InterPro:IPR028889","InterPro:IPR001394","UniProtKB/TrEMBL:B6K476","EnsemblGenomes-Gn:SJAG_03429","GOA:B6K476","InterPro:IPR018200","EnsemblGenomes-Tr:EEB08283"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rps14b","uniquename":"SJAG_03424"},{"name":"rpl701","uniquename":"SJAG_03425"},{"name":"ppr2","uniquename":"SJAG_03426"},{"name":"saf4","uniquename":"SJAG_03427"},{"uniquename":"SJAG_03428"},{"name":"ubp4","uniquename":"SJAG_03429"},{"name":"wbp4","uniquename":"SJAG_03430"},{"name":"swd2","uniquename":"SJAG_03431"},{"uniquename":"SJAG_03432"},{"name":"sce3","uniquename":"SJAG_03433"},{"name":"uga1","uniquename":"SJAG_03434"}],"genes_by_uniquename":{"HGNC:12631":null,"SJAG_03429":null,"SPBC18H10.08c":null,"YDR069C":null,"YER144C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ubiquitin carboxyl-terminal hydrolase","id":"PF00443","interpro_description":"Peptidase C19, ubiquitin carboxyl-terminal hydrolase","interpro_id":"IPR001394","interpro_name":"Peptidase_C19_UCH","locations":[{"end":568,"start":226}],"match_end":568,"match_start":226,"name":"UCH"},{"dbname":"CDD","description":"Peptidase_C19R","id":"cd02674","locations":[{"end":569,"start":227}],"match_end":569,"match_start":227,"name":"Peptidase_C19R"},{"dbname":"PROSITE_PATTERNS","description":"Ubiquitin specific protease (USP) domain signature 1.","id":"PS00972","interpro_description":"Ubiquitin specific protease, conserved site","interpro_id":"IPR018200","interpro_name":"USP_CS","locations":[{"end":242,"start":227}],"match_end":242,"match_start":227,"name":"USP_1"},{"dbname":"PROSITE_PATTERNS","description":"Ubiquitin specific protease (USP) domain signature 2.","id":"PS00973","interpro_description":"Ubiquitin specific protease, conserved site","interpro_id":"IPR018200","interpro_name":"USP_CS","locations":[{"end":529,"start":512}],"match_end":529,"match_start":512,"name":"USP_2"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin specific protease (USP) domain profile.","id":"PS50235","interpro_description":"Ubiquitin specific protease domain","interpro_id":"IPR028889","interpro_name":"USP_dom","locations":[{"end":571,"start":226}],"match_end":571,"match_start":226,"name":"USP_3"},{"dbname":"SUPERFAMILY","id":"SSF54001","interpro_description":"Papain-like cysteine peptidase superfamily","interpro_id":"IPR038765","interpro_name":"Papain-like_cys_pep_sf","locations":[{"end":570,"start":225}],"match_end":570,"match_start":225,"name":"Cysteine proteinases"},{"dbname":"GENE3D","id":"G3DSA:1.20.58.80","locations":[{"end":104,"start":6}],"match_end":104,"match_start":6},{"dbname":"GENE3D","id":"G3DSA:3.90.70.10","locations":[{"end":574,"start":212}],"match_end":574,"match_start":212,"name":"Cysteine proteinases"},{"dbname":"PANTHER","id":"PTHR21646","interpro_description":"Ubiquitin carboxyl-terminal hydrolase","interpro_id":"IPR050185","interpro_name":"Ub_carboxyl-term_hydrolase","locations":[{"end":570,"start":139}],"match_end":570,"match_start":139,"name":"UBIQUITIN CARBOXYL-TERMINAL HYDROLASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":1079258,"start_pos":1077448,"strand":"forward"},"name":"ubp4","ortholog_annotations":[{"gene_uniquename":"SJAG_03429","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12631","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03429","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03429","ortholog_taxonid":4932,"ortholog_uniquename":"YDR069C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03429","ortholog_taxonid":4932,"ortholog_uniquename":"YER144C","reference_uniquename":"PMID:29761456"}],"product":"ubiquitin C-terminal hydrolase Ubp4","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0140492","GO:0004843"]}},"subset_termids":["GO:0008233","GO:0005768","GO:0140096","GO:0031410"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004843":null,"GO:0005768":null,"GO:0032153":null,"GO:0140492":null,"MONDO:0009050":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03429.1"],"transcripts_by_uniquename":{"SJAG_03429.1":null},"uniprot_identifier":"B6K476","uniquename":"SJAG_03429"}


id: SJAG_03430
data:
  {"cv_annotations":{"biological_process":[{"annotations":[64351],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[105388],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[105390],"is_not":false,"summary":null,"term":"GO:0071005"}],"molecular_function":[{"annotations":[105392],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[64350],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR040023","EnsemblGenomes-Tr:EEB08284","EnsemblGenomes-Gn:SJAG_03430","InterPro:IPR000690","InterPro:IPR013085","InterPro:IPR036236","UniProtKB/TrEMBL:B6K477","InterPro:IPR003604","GOA:B6K477"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":145,"start":101}},{"range":{"end":200,"start":157}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl701","uniquename":"SJAG_03425"},{"name":"ppr2","uniquename":"SJAG_03426"},{"name":"saf4","uniquename":"SJAG_03427"},{"uniquename":"SJAG_03428"},{"name":"ubp4","uniquename":"SJAG_03429"},{"name":"wbp4","uniquename":"SJAG_03430"},{"name":"swd2","uniquename":"SJAG_03431"},{"uniquename":"SJAG_03432"},{"name":"sce3","uniquename":"SJAG_03433"},{"name":"uga1","uniquename":"SJAG_03434"},{"name":"atg43","uniquename":"SJAG_03435"}],"genes_by_uniquename":{"HGNC:12739":null,"SJAG_03430":null,"SPBC18H10.07":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"U1 zinc finger","id":"PF06220","interpro_description":"U1-C, C2H2-type zinc finger","interpro_id":"IPR013085","interpro_name":"U1-CZ_Znf_C2H2","locations":[{"end":44,"start":8}],"match_end":44,"match_start":8,"name":"zf-U1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger matrin-type profile.","id":"PS50171","interpro_description":"Matrin/U1-C, C2H2-type zinc finger","interpro_id":"IPR000690","interpro_name":"Matrin/U1-C_Znf_C2H2","locations":[{"end":42,"start":11}],"match_end":42,"match_start":11,"name":"ZF_MATRIN"},{"dbname":"SMART","id":"SM00451","interpro_description":"Matrin/U1-C-like, C2H2-type zinc finger","interpro_id":"IPR003604","interpro_name":"Matrin/U1-like-C_Znf_C2H2","locations":[{"end":43,"start":8}],"match_end":43,"match_start":8,"name":"ZnF_U1_5"},{"dbname":"SUPERFAMILY","id":"SSF57667","interpro_description":"Zinc finger C2H2 superfamily","interpro_id":"IPR036236","interpro_name":"Znf_C2H2_sf","locations":[{"end":60,"start":8}],"match_end":60,"match_start":8,"name":"beta-beta-alpha zinc fingers"},{"dbname":"GENE3D","id":"G3DSA:3.30.160.60","locations":[{"end":65,"start":8}],"match_end":65,"match_start":8,"name":"Classic Zinc Finger"},{"dbname":"PANTHER","id":"PTHR13173","interpro_description":"WW domain-binding protein 4","interpro_id":"IPR040023","interpro_name":"WBP4","locations":[{"end":52,"start":1}],"match_end":52,"match_start":1,"name":"WW DOMAIN BINDING PROTEIN 4"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":145,"start":101},{"end":200,"start":157}],"match_end":200,"match_start":101,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":139,"start":101}],"match_end":139,"match_start":101,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":171,"start":157},{"end":200,"start":191}],"match_end":200,"match_start":157,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1080034,"start_pos":1079383,"strand":"reverse"},"name":"wbp4","ortholog_annotations":[{"gene_uniquename":"SJAG_03430","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12739","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03430","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.07","reference_uniquename":"PMID:21511999"}],"product":"U2-type precatalytic spliceosome WW domain-binding protein Wbp4","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723","GO:0008270"]}},"subset_termids":["GO:0005634","GO:0005730","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0005730":null,"GO:0008270":null,"GO:0045292":null,"GO:0071005":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03430.1"],"transcripts_by_uniquename":{"SJAG_03430.1":null},"uniprot_identifier":"B6K477","uniquename":"SJAG_03430"}


id: SJAG_03431
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105386],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[105383],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[105384],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73674],"is_not":false,"summary":null,"term":"GO:0048188"}],"molecular_function":[{"annotations":[73673],"is_not":false,"summary":null,"term":"GO:0003682"}]},"dbxrefs":["InterPro:IPR017986","InterPro:IPR036322","GOA:B6K478","EnsemblGenomes-Tr:EEB08285","UniProtKB/TrEMBL:B6K478","InterPro:IPR015943","EnsemblGenomes-Gn:SJAG_03431","InterPro:IPR037867","InterPro:IPR001680"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppr2","uniquename":"SJAG_03426"},{"name":"saf4","uniquename":"SJAG_03427"},{"uniquename":"SJAG_03428"},{"name":"ubp4","uniquename":"SJAG_03429"},{"name":"wbp4","uniquename":"SJAG_03430"},{"name":"swd2","uniquename":"SJAG_03431"},{"uniquename":"SJAG_03432"},{"name":"sce3","uniquename":"SJAG_03433"},{"name":"uga1","uniquename":"SJAG_03434"},{"name":"atg43","uniquename":"SJAG_03435"},{"name":"smc5","uniquename":"SJAG_03436"}],"genes_by_uniquename":{"HGNC:28826":null,"SJAG_03431":null,"SPBC18H10.06c":null,"YKL018W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":54,"start":27},{"end":140,"start":105}],"match_end":140,"match_start":27,"name":"WD40"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":149,"start":108}],"match_end":149,"match_start":108,"name":"WD_REPEATS_2"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":143,"start":108}],"match_end":143,"match_start":108,"name":"WD_REPEATS_REGION"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":54,"start":13},{"end":140,"start":101}],"match_end":140,"match_start":13,"name":"WD40_4"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":320,"start":26}],"match_end":320,"match_start":26,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":329,"start":13}],"match_end":329,"match_start":13},{"dbname":"PANTHER","id":"PTHR19861","interpro_description":"COMPASS component Swd2/WDR82","interpro_id":"IPR037867","interpro_name":"Swd2/WDR82","locations":[{"end":329,"start":3}],"match_end":329,"match_start":3,"name":"WD40 REPEAT PROTEIN SWD2"}],"location":{"chromosome_name":"supercont5.2","end_pos":1081213,"start_pos":1080123,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":198,"start":187}},{"range":{"end":221,"start":216}}],"name":"swd2","ortholog_annotations":[{"gene_uniquename":"SJAG_03431","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28826","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03431","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03431","ortholog_taxonid":4932,"ortholog_uniquename":"YKL018W","reference_uniquename":"PMID:29761456"}],"product":"Set1C complex WD repeat subunit Swd2.1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003682"]}},"subset_termids":["GO:0005829","GO:0006325","GO:0006351","GO:0005634","GO:0005694","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003682":null,"GO:0005829":null,"GO:0045815":null,"GO:0048188":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03431.1"],"transcripts_by_uniquename":{"SJAG_03431.1":null},"uniprot_identifier":"B6K478","uniquename":"SJAG_03431"}


id: SJAG_03432
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105382],"is_not":false,"summary":null,"term":"GO:0016192"}],"cellular_component":[{"annotations":[105377],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[105378],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[105379],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[105380],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[105381],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08286","InterPro:IPR040324","UniProtKB/TrEMBL:B6K479","InterPro:IPR036322","InterPro:IPR001680","InterPro:IPR015943","EnsemblGenomes-Gn:SJAG_03432","InterPro:IPR017986"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":22,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"saf4","uniquename":"SJAG_03427"},{"uniquename":"SJAG_03428"},{"name":"ubp4","uniquename":"SJAG_03429"},{"name":"wbp4","uniquename":"SJAG_03430"},{"name":"swd2","uniquename":"SJAG_03431"},{"uniquename":"SJAG_03432"},{"name":"sce3","uniquename":"SJAG_03433"},{"name":"uga1","uniquename":"SJAG_03434"},{"name":"atg43","uniquename":"SJAG_03435"},{"name":"smc5","uniquename":"SJAG_03436"},{"name":"dad3","uniquename":"SJAG_03437"}],"genes_by_uniquename":{"HGNC:30512":null,"SJAG_03432":null,"SPBC18H10.05":null,"YKL121W":null,"YMR102C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":195,"start":160},{"end":238,"start":201}],"match_end":238,"match_start":160,"name":"WD40"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":195,"start":165},{"end":239,"start":205}],"match_end":239,"match_start":165,"name":"WD_REPEATS_2"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":195,"start":165}],"match_end":195,"match_start":165,"name":"WD_REPEATS_REGION"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":134,"start":93},{"end":196,"start":158},{"end":238,"start":199},{"end":279,"start":241},{"end":335,"start":282},{"end":379,"start":338}],"match_end":379,"match_start":93,"name":"WD40_4"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":381,"start":107}],"match_end":381,"match_start":107,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":428,"start":103}],"match_end":428,"match_start":103},{"dbname":"PANTHER","id":"PTHR14221","interpro_description":"WD repeat-containing protein WDR44/Dgr2","interpro_id":"IPR040324","interpro_name":"WDR44/Dgr2","locations":[{"end":435,"start":68}],"match_end":435,"match_start":68,"name":"WD REPEAT DOMAIN 44"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":22,"start":1}],"match_end":22,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1082831,"start_pos":1081260,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03432","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30512","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03432","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03432","ortholog_taxonid":4932,"ortholog_uniquename":"YKL121W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03432","ortholog_taxonid":4932,"ortholog_uniquename":"YKL121W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03432","ortholog_taxonid":4932,"ortholog_uniquename":"YMR102C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03432","ortholog_taxonid":4932,"ortholog_uniquename":"YMR102C","reference_uniquename":"PMID:26896847"}],"product":"WD repeat protein, human WDR44 family","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0005634","GO:0016192","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005794":null,"GO:0005829":null,"GO:0016192":null,"GO:0032153":null,"GO:0051286":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03432.1"],"transcripts_by_uniquename":{"SJAG_03432.1":null},"uniprot_identifier":"B6K479","uniquename":"SJAG_03432"}


id: SJAG_03433
data:
  {"cv_annotations":{"biological_process":[{"annotations":[105374],"is_not":false,"summary":null,"term":"GO:0002183"}],"cellular_component":[{"annotations":[105372],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[71883],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[59599],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[105376],"is_not":false,"summary":null,"term":"GO:0003743"}]},"dbxrefs":["InterPro:IPR000504","GOA:B6K480","InterPro:IPR035979","UniProtKB/TrEMBL:B6K480","InterPro:IPR012677","EnsemblGenomes-Gn:SJAG_03433","EnsemblGenomes-Tr:EEB08287"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":75,"start":33}},{"range":{"end":253,"start":156}},{"range":{"end":337,"start":299}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03428"},{"name":"ubp4","uniquename":"SJAG_03429"},{"name":"wbp4","uniquename":"SJAG_03430"},{"name":"swd2","uniquename":"SJAG_03431"},{"uniquename":"SJAG_03432"},{"name":"sce3","uniquename":"SJAG_03433"},{"name":"uga1","uniquename":"SJAG_03434"},{"name":"atg43","uniquename":"SJAG_03435"},{"name":"smc5","uniquename":"SJAG_03436"},{"name":"dad3","uniquename":"SJAG_03437"},{"name":"mek1","uniquename":"SJAG_03438"}],"genes_by_uniquename":{"HGNC:3285":null,"SJAG_03433":null,"SPBC18H10.04c":null,"YPR163C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":149,"start":85}],"match_end":149,"match_start":85,"name":"RRM_1"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":156,"start":81}],"match_end":156,"match_start":81,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":152,"start":82}],"match_end":152,"match_start":82,"name":"rrm1_1"},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":177,"start":71}],"match_end":177,"match_start":71,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":166,"start":36}],"match_end":166,"match_start":36},{"dbname":"PANTHER","id":"PTHR23236","locations":[{"end":230,"start":65}],"match_end":230,"match_start":65,"name":"EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":75,"start":33},{"end":253,"start":156},{"end":337,"start":299}],"match_end":337,"match_start":33,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":242,"start":232}],"match_end":242,"match_start":232,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":172,"start":156},{"end":310,"start":299}],"match_end":310,"match_start":156,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1084582,"start_pos":1083445,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":243,"start":231}},{"range":{"end":286,"start":278}},{"range":{"end":326,"start":301}}],"name":"sce3","ortholog_annotations":[{"gene_uniquename":"SJAG_03433","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3285","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03433","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03433","ortholog_taxonid":4932,"ortholog_uniquename":"YPR163C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03433","ortholog_taxonid":4932,"ortholog_uniquename":"YPR163C","reference_uniquename":"PMID:26896847"}],"product":"translation initiation factor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0003743"]}},"subset_termids":["GO:0005829","GO:0005730","GO:0002181","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002183":null,"GO:0003723":null,"GO:0003743":null,"GO:0005730":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03433.1"],"transcripts_by_uniquename":{"SJAG_03433.1":null},"uniprot_identifier":"B6K480","uniquename":"SJAG_03433"}


id: SJAG_03434
data:
  {"cv_annotations":{"biological_process":[{"annotations":[56989],"is_not":false,"summary":null,"term":"GO:0009448"},{"annotations":[91470],"is_not":false,"summary":null,"term":"GO:0006538"}],"cellular_component":[{"annotations":[91467],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[69569],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[56990],"is_not":false,"summary":null,"term":"GO:0034386"},{"annotations":[69570],"is_not":false,"summary":null,"term":"GO:0030170"}],"mondo":[{"annotations":[86446],"is_not":false,"summary":null,"term":"MONDO:0013166"}]},"dbxrefs":["InterPro:IPR015421","GOA:B6K481","EnsemblGenomes-Tr:EEB08288","InterPro:IPR005814","EnsemblGenomes-Gn:SJAG_03434","InterPro:IPR015424","InterPro:IPR004631","UniProtKB/TrEMBL:B6K481","InterPro:IPR015422"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubp4","uniquename":"SJAG_03429"},{"name":"wbp4","uniquename":"SJAG_03430"},{"name":"swd2","uniquename":"SJAG_03431"},{"uniquename":"SJAG_03432"},{"name":"sce3","uniquename":"SJAG_03433"},{"name":"uga1","uniquename":"SJAG_03434"},{"name":"atg43","uniquename":"SJAG_03435"},{"name":"smc5","uniquename":"SJAG_03436"},{"name":"dad3","uniquename":"SJAG_03437"},{"name":"mek1","uniquename":"SJAG_03438"},{"uniquename":"SJAG_03439"}],"genes_by_uniquename":{"HGNC:23":null,"SJAG_03434":null,"SPAC19D5.07":null,"YGR019W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Aminotransferase class-III","id":"PF00202","interpro_description":"Aminotransferase class-III","interpro_id":"IPR005814","interpro_name":"Aminotrans_3","locations":[{"end":466,"start":38}],"match_end":466,"match_start":38,"name":"Aminotran_3"},{"dbname":"CDD","description":"OAT_like","id":"cd00610","interpro_description":"Aminotransferase class-III","interpro_id":"IPR005814","interpro_name":"Aminotrans_3","locations":[{"end":467,"start":49}],"match_end":467,"match_start":49,"name":"OAT_like"},{"dbname":"PROSITE_PATTERNS","description":"Aminotransferases class-III pyridoxal-phosphate attachment site.","id":"PS00600","interpro_description":"Aminotransferases class-III pyridoxal-phosphate attachment site","interpro_id":"IPR049704","interpro_name":"Aminotrans_3_PPA_site","locations":[{"end":330,"start":291}],"match_end":330,"match_start":291,"name":"AA_TRANSFER_CLASS_3"},{"dbname":"FUNFAM","description":"Probable 4-aminobutyrate aminotransferase","id":"G3DSA:3.40.640.10:FF:000073","locations":[{"end":378,"start":80}],"match_end":378,"match_start":80},{"dbname":"SUPERFAMILY","id":"SSF53383","interpro_description":"Pyridoxal phosphate-dependent transferase","interpro_id":"IPR015424","interpro_name":"PyrdxlP-dep_Trfase","locations":[{"end":468,"start":34}],"match_end":468,"match_start":34,"name":"PLP-dependent transferases"},{"dbname":"GENE3D","id":"G3DSA:3.90.1150.10","interpro_description":"Pyridoxal phosphate-dependent transferase, small domain","interpro_id":"IPR015422","interpro_name":"PyrdxlP-dep_Trfase_small","locations":[{"end":79,"start":20},{"end":460,"start":379}],"match_end":460,"match_start":20,"name":"Aspartate Aminotransferase, domain 1"},{"dbname":"GENE3D","id":"G3DSA:3.40.640.10","interpro_description":"Pyridoxal phosphate-dependent transferase, major domain","interpro_id":"IPR015421","interpro_name":"PyrdxlP-dep_Trfase_major","locations":[{"end":378,"start":80}],"match_end":378,"match_start":80},{"dbname":"PANTHER","id":"PTHR43206","locations":[{"end":468,"start":7}],"match_end":468,"match_start":7,"name":"AMINOTRANSFERASE"},{"dbname":"PIRSF","id":"PIRSF000521","interpro_description":"Aminotransferase class-III","interpro_id":"IPR005814","interpro_name":"Aminotrans_3","locations":[{"end":469,"start":1}],"match_end":469,"match_start":1,"name":"Transaminase_4ab_Lys_Orn"},{"dbname":"NCBIFAM","description":"4-aminobutyrate--2-oxoglutarate transaminase","id":"TIGR00699","interpro_description":"4-aminobutyrate aminotransferase, eukaryotic","interpro_id":"IPR004631","interpro_name":"4NH2But_aminotransferase_euk","locations":[{"end":466,"start":5}],"match_end":466,"match_start":5,"name":"GABAtrns_euk"}],"location":{"chromosome_name":"supercont5.2","end_pos":1087279,"start_pos":1085870,"strand":"forward"},"name":"uga1","ortholog_annotations":[{"gene_uniquename":"SJAG_03434","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03434","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19D5.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03434","ortholog_taxonid":4932,"ortholog_uniquename":"YGR019W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03434","ortholog_taxonid":4932,"ortholog_uniquename":"YGR019W","reference_uniquename":"PMID:26896847"}],"product":"4-aminobutyrate aminotransferase (GABA transaminase)","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030170"],"not-binding":["GO:0034386"]}},"subset_termids":["GO:0005739","MONDO:0004736","MONDO:0005066","GO:0006520","GO:0005829","GO:0016769"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0005829":null,"GO:0006538":null,"GO:0009448":null,"GO:0030170":null,"GO:0034386":null,"MONDO:0013166":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03434.1"],"transcripts_by_uniquename":{"SJAG_03434.1":null},"uniprot_identifier":"B6K481","uniquename":"SJAG_03434"}


id: SJAG_03435
data:
  {"cv_annotations":{"biological_process":[{"annotations":[60431],"is_not":false,"summary":null,"term":"GO:0000423"}],"cellular_component":[{"annotations":[88805],"is_not":false,"summary":null,"term":"GO:0005741"}],"molecular_function":[{"annotations":[60430],"is_not":false,"summary":null,"term":"GO:0140580"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03435","EnsemblGenomes-Tr:EEB08289","UniProtKB/TrEMBL:B6K482","InterPro:IPR013898"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":79,"start":58}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"wbp4","uniquename":"SJAG_03430"},{"name":"swd2","uniquename":"SJAG_03431"},{"uniquename":"SJAG_03432"},{"name":"sce3","uniquename":"SJAG_03433"},{"name":"uga1","uniquename":"SJAG_03434"},{"name":"atg43","uniquename":"SJAG_03435"},{"name":"smc5","uniquename":"SJAG_03436"},{"name":"dad3","uniquename":"SJAG_03437"},{"name":"mek1","uniquename":"SJAG_03438"},{"uniquename":"SJAG_03439"},{"name":"pex16","uniquename":"SJAG_03440"}],"genes_by_uniquename":{"SJAG_03435":null,"SPAC14C4.01c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Autophagy receptor ATG43","id":"PF08589","interpro_description":"Mitophagy receptor Atg43","interpro_id":"IPR013898","interpro_name":"Atg43","locations":[{"end":131,"start":32}],"match_end":131,"match_start":32,"name":"ATG43"},{"dbname":"PANTHER","id":"PTHR38699","interpro_description":"Mitophagy receptor Atg43","interpro_id":"IPR013898","interpro_name":"Atg43","locations":[{"end":175,"start":41}],"match_end":175,"match_start":41,"name":"CHROMOSOME 1, WHOLE GENOME SHOTGUN SEQUENCE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":79,"start":58}],"match_end":79,"match_start":58,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":78,"start":61}],"match_end":78,"match_start":61,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1088157,"start_pos":1087603,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":43,"start":31}},{"range":{"end":77,"start":60}}],"name":"atg43","ortholog_annotations":[{"gene_uniquename":"SJAG_03435","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.01c","reference_uniquename":"PMID:21511999"}],"product":"mitophagy receptor Atg43","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0140580"]}},"subset_termids":["GO:0005739","GO:0006914","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000423":null,"GO:0005741":null,"GO:0140580":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03435.1"],"transcripts_by_uniquename":{"SJAG_03435.1":null},"uniprot_identifier":"B6K482","uniquename":"SJAG_03435"}


id: SJAG_03436
data:
  {"coiled_coil_coords":[{"range":{"end":229,"start":209}},{"range":{"end":275,"start":255}},{"range":{"end":314,"start":287}},{"range":{"end":352,"start":332}},{"range":{"end":389,"start":369}},{"range":{"end":424,"start":404}},{"range":{"end":690,"start":639}},{"range":{"end":718,"start":698}},{"range":{"end":812,"start":762}},{"range":{"end":841,"start":821}},{"range":{"end":899,"start":869}}],"cv_annotations":{"biological_process":[{"annotations":[69948],"is_not":false,"summary":null,"term":"GO:0000724"}],"cellular_component":[{"annotations":[88809],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[69945],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[69947],"is_not":false,"summary":null,"term":"GO:0030915"}],"molecular_function":[{"annotations":[88813],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[88814],"is_not":false,"summary":null,"term":"GO:0061776"},{"annotations":[69946],"is_not":false,"summary":null,"term":"GO:0003697"}],"mondo":[{"annotations":[85386],"is_not":false,"summary":null,"term":"MONDO:0859576"}]},"dbxrefs":["InterPro:IPR003395","GOA:B6K483","InterPro:IPR027131","EnsemblGenomes-Gn:SJAG_03436","UniProtKB/TrEMBL:B6K483","InterPro:IPR027417","EnsemblGenomes-Tr:EEB08290"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"swd2","uniquename":"SJAG_03431"},{"uniquename":"SJAG_03432"},{"name":"sce3","uniquename":"SJAG_03433"},{"name":"uga1","uniquename":"SJAG_03434"},{"name":"atg43","uniquename":"SJAG_03435"},{"name":"smc5","uniquename":"SJAG_03436"},{"name":"dad3","uniquename":"SJAG_03437"},{"name":"mek1","uniquename":"SJAG_03438"},{"uniquename":"SJAG_03439"},{"name":"pex16","uniquename":"SJAG_03440"},{"name":"laf1","uniquename":"SJAG_03441"}],"genes_by_uniquename":{"HGNC:20465":null,"SJAG_03436":null,"SPAC14C4.02c":null,"YOL034W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RecF/RecN/SMC N terminal domain","id":"PF02463","interpro_description":"RecF/RecN/SMC, N-terminal","interpro_id":"IPR003395","interpro_name":"RecF/RecN/SMC_N","locations":[{"end":1030,"start":27}],"match_end":1030,"match_start":27,"name":"SMC_N"},{"dbname":"FUNFAM","description":"Structural maintenance of chromosomes 5","id":"G3DSA:3.40.50.300:FF:001301","locations":[{"end":1046,"start":876}],"match_end":1046,"match_start":876},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":228,"start":27},{"end":1034,"start":858}],"match_end":1034,"match_start":27,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":228,"start":26},{"end":1041,"start":874}],"match_end":1041,"match_start":26},{"dbname":"PANTHER","id":"PTHR45916","locations":[{"end":1075,"start":7}],"match_end":1075,"match_start":7,"name":"STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5"},{"dbname":"COILS","id":"Coil","locations":[{"end":229,"start":209},{"end":275,"start":255},{"end":314,"start":287},{"end":352,"start":332},{"end":389,"start":369},{"end":424,"start":404},{"end":690,"start":639},{"end":718,"start":698},{"end":812,"start":762},{"end":841,"start":821},{"end":899,"start":869}],"match_end":899,"match_start":209,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":1091947,"start_pos":1088614,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":247,"start":232}},{"range":{"end":269,"start":256}},{"range":{"end":662,"start":648}},{"range":{"end":854,"start":833}}],"name":"smc5","ortholog_annotations":[{"gene_uniquename":"SJAG_03436","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20465","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03436","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03436","ortholog_taxonid":4932,"ortholog_uniquename":"YOL034W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03436","ortholog_taxonid":4932,"ortholog_uniquename":"YOL034W","reference_uniquename":"PMID:26896847"}],"product":"Smc5-6 complex SMC P-loop ATPase subunit Smc5","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0061776","GO:0003697","GO:0005524"]}},"subset_termids":["GO:0006281","GO:0006310","GO:0005634","GO:0005694","GO:0061776","GO:0000935"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000724":null,"GO:0000935":null,"GO:0003697":null,"GO:0005524":null,"GO:0005634":null,"GO:0030915":null,"GO:0061776":null,"MONDO:0859576":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03436.1"],"transcripts_by_uniquename":{"SJAG_03436.1":null},"uniprot_identifier":"B6K483","uniquename":"SJAG_03436"}


id: SJAG_03437
data:
  {"coiled_coil_coords":[{"range":{"end":33,"start":13}}],"cv_annotations":{"biological_process":[{"annotations":[88901],"is_not":false,"summary":null,"term":"GO:1990758"},{"annotations":[88902],"is_not":false,"summary":null,"term":"GO:1990976"},{"annotations":[88903],"is_not":false,"summary":null,"term":"GO:0051455"}],"cellular_component":[{"annotations":[63478],"is_not":false,"summary":null,"term":"GO:0042729"},{"annotations":[63476],"is_not":false,"summary":null,"term":"GO:0072686"}]},"dbxrefs":["GOA:B6K484","InterPro:IPR013965","EnsemblGenomes-Tr:EEB08291","EnsemblGenomes-Gn:SJAG_03437","UniProtKB/TrEMBL:B6K484"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03432"},{"name":"sce3","uniquename":"SJAG_03433"},{"name":"uga1","uniquename":"SJAG_03434"},{"name":"atg43","uniquename":"SJAG_03435"},{"name":"smc5","uniquename":"SJAG_03436"},{"name":"dad3","uniquename":"SJAG_03437"},{"name":"mek1","uniquename":"SJAG_03438"},{"uniquename":"SJAG_03439"},{"name":"pex16","uniquename":"SJAG_03440"},{"name":"laf1","uniquename":"SJAG_03441"},{"name":"vtc2","uniquename":"SJAG_03442"}],"genes_by_uniquename":{"SJAG_03437":null,"SPAC14C4.16":null,"YBR233W-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DASH complex subunit Dad3","id":"PF08656","interpro_description":"DASH complex subunit Dad3","interpro_id":"IPR013965","interpro_name":"DASH_Dad3","locations":[{"end":76,"start":7}],"match_end":76,"match_start":7,"name":"DASH_Dad3"},{"dbname":"PANTHER","id":"PTHR28017","interpro_description":"DASH complex subunit Dad3","interpro_id":"IPR013965","interpro_name":"DASH_Dad3","locations":[{"end":82,"start":3}],"match_end":82,"match_start":3,"name":"DASH COMPLEX SUBUNIT DAD3"},{"dbname":"COILS","id":"Coil","locations":[{"end":33,"start":13}],"match_end":33,"match_start":13,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":1092331,"start_pos":1092012,"strand":"forward"},"name":"dad3","ortholog_annotations":[{"gene_uniquename":"SJAG_03437","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.16","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03437","ortholog_taxonid":4932,"ortholog_uniquename":"YBR233W-A","reference_uniquename":"PMID:29761456"}],"product":"DASH complex subunit Dad3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0000070","GO:0000776","GO:0005634","GO:0140013","GO:0005694","GO:0072686","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0042729":null,"GO:0051455":null,"GO:0072686":null,"GO:1990758":null,"GO:1990976":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03437.1"],"transcripts_by_uniquename":{"SJAG_03437.1":null},"uniprot_identifier":"B6K484","uniquename":"SJAG_03437"}


id: SJAG_03438
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":190,"start":190}}],"cv_annotations":{"biological_process":[{"annotations":[88819],"is_not":false,"summary":null,"term":"GO:0051598"},{"annotations":[88820],"is_not":false,"summary":null,"term":"GO:1904514"},{"annotations":[88821],"is_not":false,"summary":null,"term":"GO:0010845"}],"cellular_component":[{"annotations":[88816],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[88817],"is_not":false,"summary":null,"term":"GO:0030998"}],"molecular_function":[{"annotations":[67889],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[78796],"is_not":false,"summary":null,"term":"GO:0004674"}]},"dbxrefs":["InterPro:IPR008984","InterPro:IPR017441","UniProtKB/TrEMBL:B6K485","InterPro:IPR011009","InterPro:IPR000253","EnsemblGenomes-Gn:SJAG_03438","GOA:B6K485","EnsemblGenomes-Tr:EEB08292","InterPro:IPR008271","InterPro:IPR000719"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sce3","uniquename":"SJAG_03433"},{"name":"uga1","uniquename":"SJAG_03434"},{"name":"atg43","uniquename":"SJAG_03435"},{"name":"smc5","uniquename":"SJAG_03436"},{"name":"dad3","uniquename":"SJAG_03437"},{"name":"mek1","uniquename":"SJAG_03438"},{"uniquename":"SJAG_03439"},{"name":"pex16","uniquename":"SJAG_03440"},{"name":"laf1","uniquename":"SJAG_03441"},{"name":"vtc2","uniquename":"SJAG_03442"},{"uniquename":"SJAG_03443"}],"genes_by_uniquename":{"SJAG_03438":null,"SPAC14C4.03":null,"YOR351C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein kinase domain","id":"PF00069","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":422,"start":164}],"match_end":422,"match_start":164,"name":"Pkinase"},{"dbname":"PFAM","description":"FHA domain","id":"PF00498","interpro_description":"Forkhead-associated (FHA) domain","interpro_id":"IPR000253","interpro_name":"FHA_dom","locations":[{"end":133,"start":63}],"match_end":133,"match_start":63,"name":"FHA"},{"dbname":"CDD","description":"FHA_MEK1-like","id":"cd22670","locations":[{"end":144,"start":41}],"match_end":144,"match_start":41,"name":"FHA_MEK1-like"},{"dbname":"PROSITE_PATTERNS","description":"Serine/Threonine protein kinases active-site signature.","id":"PS00108","interpro_description":"Serine/threonine-protein kinase, active site","interpro_id":"IPR008271","interpro_name":"Ser/Thr_kinase_AS","locations":[{"end":290,"start":278}],"match_end":290,"match_start":278,"name":"PROTEIN_KINASE_ST"},{"dbname":"PROSITE_PATTERNS","description":"Protein kinases ATP-binding region signature.","id":"PS00107","interpro_description":"Protein kinase, ATP binding site","interpro_id":"IPR017441","interpro_name":"Protein_kinase_ATP_BS","locations":[{"end":190,"start":167}],"match_end":190,"match_start":167,"name":"PROTEIN_KINASE_ATP"},{"dbname":"PROSITE_PROFILES","description":"Forkhead-associated (FHA) domain profile.","id":"PS50006","interpro_description":"Forkhead-associated (FHA) domain","interpro_id":"IPR000253","interpro_name":"FHA_dom","locations":[{"end":117,"start":63}],"match_end":117,"match_start":63,"name":"FHA_DOMAIN"},{"dbname":"PROSITE_PROFILES","description":"Protein kinase domain profile.","id":"PS50011","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":422,"start":161}],"match_end":422,"match_start":161,"name":"PROTEIN_KINASE_DOM"},{"dbname":"SMART","id":"SM00220","interpro_description":"Protein kinase domain","interpro_id":"IPR000719","interpro_name":"Prot_kinase_dom","locations":[{"end":422,"start":161}],"match_end":422,"match_start":161,"name":"serkin_6"},{"dbname":"SMART","id":"SM00240","interpro_description":"Forkhead-associated (FHA) domain","interpro_id":"IPR000253","interpro_name":"FHA_dom","locations":[{"end":117,"start":62}],"match_end":117,"match_start":62,"name":"FHA_2"},{"dbname":"FUNFAM","description":"Maternal embryonic leucine zipper kinase","id":"G3DSA:1.10.510.10:FF:000571","locations":[{"end":436,"start":154}],"match_end":436,"match_start":154},{"dbname":"SUPERFAMILY","id":"SSF56112","interpro_description":"Protein kinase-like domain superfamily","interpro_id":"IPR011009","interpro_name":"Kinase-like_dom_sf","locations":[{"end":430,"start":144}],"match_end":430,"match_start":144,"name":"Protein kinase-like (PK-like)"},{"dbname":"SUPERFAMILY","id":"SSF49879","interpro_description":"SMAD/FHA domain superfamily","interpro_id":"IPR008984","interpro_name":"SMAD_FHA_dom_sf","locations":[{"end":144,"start":16}],"match_end":144,"match_start":16,"name":"SMAD/FHA domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.510.10","locations":[{"end":438,"start":153}],"match_end":438,"match_start":153,"name":"Transferase(Phosphotransferase) domain 1"},{"dbname":"GENE3D","id":"G3DSA:2.60.200.20","locations":[{"end":152,"start":28}],"match_end":152,"match_start":28},{"dbname":"PANTHER","id":"PTHR24347","locations":[{"end":424,"start":158}],"match_end":424,"match_start":158,"name":"SERINE/THREONINE-PROTEIN KINASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":1094385,"start_pos":1092961,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":364,"start":351}}],"name":"mek1","ortholog_annotations":[{"gene_uniquename":"SJAG_03438","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03438","ortholog_taxonid":4932,"ortholog_uniquename":"YOR351C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03438","ortholog_taxonid":4932,"ortholog_uniquename":"YOR351C","reference_uniquename":"PMID:26896847"}],"product":"Cds1/Rad53/Chk2 family protein kinase Mek1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004674"]}},"subset_termids":["GO:0005829","GO:0005634","GO:0016301","GO:0140096","GO:0004672","GO:0140013","GO:0006310","GO:0005694","GO:0023052","GO:0006260"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004674":null,"GO:0005524":null,"GO:0005829":null,"GO:0010845":null,"GO:0030998":null,"GO:0051598":null,"GO:1904514":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03438.1"],"transcripts_by_uniquename":{"SJAG_03438.1":null},"uniprot_identifier":"B6K485","uniquename":"SJAG_03438"}


id: SJAG_03439
data:
  {"coiled_coil_coords":[{"range":{"end":89,"start":65}},{"range":{"end":138,"start":118}},{"range":{"end":223,"start":196}},{"range":{"end":363,"start":336}}],"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB08293","UniProtKB/TrEMBL:B6K486","EnsemblGenomes-Gn:SJAG_03439"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"uga1","uniquename":"SJAG_03434"},{"name":"atg43","uniquename":"SJAG_03435"},{"name":"smc5","uniquename":"SJAG_03436"},{"name":"dad3","uniquename":"SJAG_03437"},{"name":"mek1","uniquename":"SJAG_03438"},{"uniquename":"SJAG_03439"},{"name":"pex16","uniquename":"SJAG_03440"},{"name":"laf1","uniquename":"SJAG_03441"},{"name":"vtc2","uniquename":"SJAG_03442"},{"uniquename":"SJAG_03443"},{"name":"agn1","uniquename":"SJAG_03444"}],"genes_by_uniquename":{"SJAG_03439":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":89,"start":65},{"end":138,"start":118},{"end":223,"start":196},{"end":363,"start":336}],"match_end":363,"match_start":65,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":1096237,"start_pos":1094542,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":111,"start":100}},{"range":{"end":257,"start":238}}],"product":"Schizosaccharomyces japonicus specific disordered protein","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_03439.1"],"transcripts_by_uniquename":{"SJAG_03439.1":null},"uniprot_identifier":"B6K486","uniquename":"SJAG_03439"}


id: SJAG_03440
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111139],"is_not":false,"summary":null,"term":"GO:0016558"},{"annotations":[111140],"is_not":false,"summary":null,"term":"GO:0045046"}],"cellular_component":[{"annotations":[75338],"is_not":false,"summary":null,"term":"GO:0005778"}],"mondo":[{"annotations":[87001],"is_not":false,"summary":null,"term":"MONDO:0013942"},{"annotations":[86999],"is_not":false,"summary":null,"term":"MONDO:0013943"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03440","GOA:B6K487","UniProtKB/TrEMBL:B6K487","InterPro:IPR013919","EnsemblGenomes-Tr:EEB08294"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atg43","uniquename":"SJAG_03435"},{"name":"smc5","uniquename":"SJAG_03436"},{"name":"dad3","uniquename":"SJAG_03437"},{"name":"mek1","uniquename":"SJAG_03438"},{"uniquename":"SJAG_03439"},{"name":"pex16","uniquename":"SJAG_03440"},{"name":"laf1","uniquename":"SJAG_03441"},{"name":"vtc2","uniquename":"SJAG_03442"},{"uniquename":"SJAG_03443"},{"name":"agn1","uniquename":"SJAG_03444"},{"uniquename":"SJAG_03445"}],"genes_by_uniquename":{"HGNC:8857":null,"SJAG_03440":null,"SPBC646.15c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Peroxisomal membrane protein (Pex16)","id":"PF08610","interpro_description":"Peroxisome membrane protein, Pex16","interpro_id":"IPR013919","interpro_name":"Pex16","locations":[{"end":353,"start":4}],"match_end":353,"match_start":4,"name":"Pex16"},{"dbname":"PANTHER","id":"PTHR13299","interpro_description":"Peroxisome membrane protein, Pex16","interpro_id":"IPR013919","interpro_name":"Pex16","locations":[{"end":360,"start":2}],"match_end":360,"match_start":2,"name":"PEROXISOMAL MEMBRANE PROTEIN PEX16"}],"location":{"chromosome_name":"supercont5.2","end_pos":1098044,"start_pos":1096700,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":342,"start":328}}],"name":"pex16","ortholog_annotations":[{"gene_uniquename":"SJAG_03440","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8857","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03440","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC646.15c","reference_uniquename":"PMID:21511999"}],"product":"Pex16 family peroxisome import protein Pex16","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["MONDO:0005066","GO:0005777","MONDO:0005559","MONDO:0019053","MONDO:0005244","GO:0007031","MONDO:0006025","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005778":null,"GO:0016558":null,"GO:0045046":null,"MONDO:0013942":null,"MONDO:0013943":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03440.1"],"transcripts_by_uniquename":{"SJAG_03440.1":null},"uniprot_identifier":"B6K487","uniquename":"SJAG_03440"}


id: SJAG_03441
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88869],"is_not":false,"summary":null,"term":"GO:0006357"},{"annotations":[88870],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[88866],"is_not":false,"summary":null,"term":"GO:0033698"},{"annotations":[88867],"is_not":false,"summary":null,"term":"GO:0070210"}],"molecular_function":[{"annotations":[88871],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[88872],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[88873],"is_not":false,"summary":null,"term":"GO:0003713"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08295","GOA:B6K488","InterPro:IPR009057","EnsemblGenomes-Gn:SJAG_03441","UniProtKB/TrEMBL:B6K488","InterPro:IPR007526"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"smc5","uniquename":"SJAG_03436"},{"name":"dad3","uniquename":"SJAG_03437"},{"name":"mek1","uniquename":"SJAG_03438"},{"uniquename":"SJAG_03439"},{"name":"pex16","uniquename":"SJAG_03440"},{"name":"laf1","uniquename":"SJAG_03441"},{"name":"vtc2","uniquename":"SJAG_03442"},{"uniquename":"SJAG_03443"},{"name":"agn1","uniquename":"SJAG_03444"},{"uniquename":"SJAG_03445"},{"uniquename":"SJAG_03446"}],"genes_by_uniquename":{"SJAG_03441":null,"SPAC14C4.12c":null,"YAL034C":null,"YOR338W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"SWIRM domain","id":"PF04433","interpro_description":"SWIRM domain","interpro_id":"IPR007526","interpro_name":"SWIRM","locations":[{"end":283,"start":213}],"match_end":283,"match_start":213,"name":"SWIRM"},{"dbname":"PROSITE_PROFILES","description":"SWIRM domain profile.","id":"PS50934","interpro_description":"SWIRM domain","interpro_id":"IPR007526","interpro_name":"SWIRM","locations":[{"end":285,"start":195}],"match_end":285,"match_start":195,"name":"SWIRM"},{"dbname":"FUNFAM","description":"Transcriptional adapter 2","id":"G3DSA:1.10.10.10:FF:000087","locations":[{"end":284,"start":196}],"match_end":284,"match_start":196},{"dbname":"SUPERFAMILY","id":"SSF46689","interpro_description":"Homedomain-like superfamily","interpro_id":"IPR009057","interpro_name":"Homeodomain-like_sf","locations":[{"end":284,"start":186}],"match_end":284,"match_start":186,"name":"Homeodomain-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.10","interpro_description":"Winged helix-like DNA-binding domain superfamily","interpro_id":"IPR036388","interpro_name":"WH-like_DNA-bd_sf","locations":[{"end":284,"start":196}],"match_end":284,"match_start":196},{"dbname":"PANTHER","id":"PTHR12374","locations":[{"end":278,"start":70}],"match_end":278,"match_start":70,"name":"TRANSCRIPTIONAL ADAPTOR 2  ADA2 -RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":1099484,"start_pos":1098627,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":70,"start":55}},{"range":{"end":111,"start":102}},{"range":{"end":140,"start":125}}],"name":"laf1","ortholog_annotations":[{"gene_uniquename":"SJAG_03441","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03441","ortholog_taxonid":4932,"ortholog_uniquename":"YAL034C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03441","ortholog_taxonid":4932,"ortholog_uniquename":"YAL034C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03441","ortholog_taxonid":4932,"ortholog_uniquename":"YOR338W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03441","ortholog_taxonid":4932,"ortholog_uniquename":"YOR338W","reference_uniquename":"PMID:26896847"}],"product":"Clr6 associated factor 1 Laf1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677","GO:0003682"],"not-binding":["GO:0003713"]}},"subset_termids":["GO:0006355","GO:0005654","GO:0003712","GO:0006325","GO:0006351","GO:0005694","GO:0005634","GO:0003713","GO:0060090"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003677":null,"GO:0003682":null,"GO:0003713":null,"GO:0006357":null,"GO:0033698":null,"GO:0045815":null,"GO:0070210":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03441.1"],"transcripts_by_uniquename":{"SJAG_03441.1":null},"uniprot_identifier":"B6K488","uniquename":"SJAG_03441"}


id: SJAG_03442
data:
  {"coiled_coil_coords":[{"range":{"end":85,"start":65}}],"cv_annotations":{"biological_process":[{"annotations":[88862],"is_not":false,"summary":null,"term":"GO:0006112"},{"annotations":[72510],"is_not":false,"summary":null,"term":"GO:0006799"},{"annotations":[88864],"is_not":false,"summary":null,"term":"GO:0180042"},{"annotations":[88865],"is_not":false,"summary":null,"term":"GO:0007034"}],"cellular_component":[{"annotations":[72509],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[72508],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[72511],"is_not":false,"summary":null,"term":"GO:0033254"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K489","InterPro:IPR004331","GOA:B6K489","EnsemblGenomes-Gn:SJAG_03442","EnsemblGenomes-Tr:EEB08296","InterPro:IPR018966","InterPro:IPR003807"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":196,"start":175}},{"range":{"end":569,"start":544}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dad3","uniquename":"SJAG_03437"},{"name":"mek1","uniquename":"SJAG_03438"},{"uniquename":"SJAG_03439"},{"name":"pex16","uniquename":"SJAG_03440"},{"name":"laf1","uniquename":"SJAG_03441"},{"name":"vtc2","uniquename":"SJAG_03442"},{"uniquename":"SJAG_03443"},{"name":"agn1","uniquename":"SJAG_03444"},{"uniquename":"SJAG_03445"},{"uniquename":"SJAG_03446"},{"uniquename":"SJAG_03447"}],"genes_by_uniquename":{"SJAG_03442":null,"SPAC14C4.11":null,"YFL004W":null,"YPL019C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Domain of unknown function (DUF202)","id":"PF02656","interpro_description":"Domain of unknown function DUF202","interpro_id":"IPR003807","interpro_name":"DUF202","locations":[{"end":679,"start":619}],"match_end":679,"match_start":619,"name":"DUF202"},{"dbname":"PFAM","description":"VTC domain","id":"PF09359","interpro_description":"VTC domain","interpro_id":"IPR018966","interpro_name":"VTC_domain","locations":[{"end":484,"start":204}],"match_end":484,"match_start":204,"name":"VTC"},{"dbname":"CDD","description":"SPX_VTC2_like","id":"cd14480","locations":[{"end":131,"start":2}],"match_end":131,"match_start":2,"name":"SPX_VTC2_like"},{"dbname":"PROSITE_PROFILES","description":"SPX domain profile.","id":"PS51382","interpro_description":"SPX domain","interpro_id":"IPR004331","interpro_name":"SPX_dom","locations":[{"end":143,"start":1}],"match_end":143,"match_start":1,"name":"SPX"},{"dbname":"GENE3D","id":"G3DSA:3.20.100.30","interpro_description":"VTC domain superfamily","interpro_id":"IPR042267","interpro_name":"VTC_sf","locations":[{"end":496,"start":195}],"match_end":496,"match_start":195,"name":"VTC, catalytic tunnel domain"},{"dbname":"PANTHER","id":"PTHR46140","interpro_description":"Vacuolar Transporter Chaperone Complex Subunit","interpro_id":"IPR051572","interpro_name":"VTC_Complex_Subunit","locations":[{"end":719,"start":1}],"match_end":719,"match_start":1,"name":"VACUOLAR TRANSPORTER CHAPERONE 1-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":85,"start":65}],"match_end":85,"match_start":65,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":196,"start":175},{"end":569,"start":544}],"match_end":569,"match_start":175,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1103361,"start_pos":1101145,"strand":"reverse"},"name":"vtc2","ortholog_annotations":[{"gene_uniquename":"SJAG_03442","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03442","ortholog_taxonid":4932,"ortholog_uniquename":"YFL004W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03442","ortholog_taxonid":4932,"ortholog_uniquename":"YFL004W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03442","ortholog_taxonid":4932,"ortholog_uniquename":"YPL019C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03442","ortholog_taxonid":4932,"ortholog_uniquename":"YPL019C","reference_uniquename":"PMID:26896847"}],"product":"vacuolar transporter chaperone (VTC) complex polyphosphate synthetase subunit Vtc2/3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005773","GO:0005783","GO:0006091","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005783":null,"GO:0006112":null,"GO:0006799":null,"GO:0007034":null,"GO:0033254":null,"GO:0180042":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":673,"start":651}},{"assigned_by":"TMHMM","range":{"end":716,"start":694}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03442.1"],"transcripts_by_uniquename":{"SJAG_03442.1":null},"uniprot_identifier":"B6K489","uniquename":"SJAG_03442"}


id: SJAG_03443
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[88856],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[88857],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[61091],"is_not":false,"summary":null,"term":"GO:0010945"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K490","EnsemblGenomes-Tr:EEB08297","GOA:B6K490","EnsemblGenomes-Gn:SJAG_03443","InterPro:IPR015797","InterPro:IPR000086"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mek1","uniquename":"SJAG_03438"},{"uniquename":"SJAG_03439"},{"name":"pex16","uniquename":"SJAG_03440"},{"name":"laf1","uniquename":"SJAG_03441"},{"name":"vtc2","uniquename":"SJAG_03442"},{"uniquename":"SJAG_03443"},{"name":"agn1","uniquename":"SJAG_03444"},{"uniquename":"SJAG_03445"},{"uniquename":"SJAG_03446"},{"uniquename":"SJAG_03447"},{"name":"nab2","uniquename":"SJAG_03448"}],"genes_by_uniquename":{"SJAG_03443":null,"SPAC14C4.10c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"NUDIX domain","id":"PF00293","interpro_description":"NUDIX hydrolase domain","interpro_id":"IPR000086","interpro_name":"NUDIX_hydrolase_dom","locations":[{"end":172,"start":63}],"match_end":172,"match_start":63,"name":"NUDIX"},{"dbname":"CDD","description":"CoAse","id":"cd03426","interpro_description":"Coenzyme A pyrophosphatase","interpro_id":"IPR045121","interpro_name":"CoAse","locations":[{"end":175,"start":31}],"match_end":175,"match_start":31,"name":"CoAse"},{"dbname":"PROSITE_PROFILES","description":"Nudix hydrolase domain profile.","id":"PS51462","interpro_description":"NUDIX hydrolase domain","interpro_id":"IPR000086","interpro_name":"NUDIX_hydrolase_dom","locations":[{"end":196,"start":29}],"match_end":196,"match_start":29,"name":"NUDIX"},{"dbname":"SUPERFAMILY","id":"SSF55811","interpro_description":"NUDIX hydrolase-like domain superfamily","interpro_id":"IPR015797","interpro_name":"NUDIX_hydrolase-like_dom_sf","locations":[{"end":172,"start":63}],"match_end":172,"match_start":63,"name":"Nudix"},{"dbname":"GENE3D","id":"G3DSA:3.90.79.10","locations":[{"end":244,"start":9}],"match_end":244,"match_start":9,"name":"Nucleoside Triphosphate Pyrophosphohydrolase"},{"dbname":"PANTHER","id":"PTHR12992","interpro_description":"Coenzyme A pyrophosphatase","interpro_id":"IPR045121","interpro_name":"CoAse","locations":[{"end":245,"start":26}],"match_end":245,"match_start":26,"name":"NUDIX HYDROLASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":1104937,"start_pos":1103896,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03443","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.10c","reference_uniquename":"PMID:21511999"}],"product":"Nudix family hydrolase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0010945"]}},"subset_termids":["GO:0005794","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005783":null,"GO:0005794":null,"GO:0010945":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":327,"start":305}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03443.1"],"transcripts_by_uniquename":{"SJAG_03443.1":null},"uniprot_identifier":"B6K490","uniquename":"SJAG_03443"}


id: SJAG_03444
data:
  {"alleles_by_uniquename":{"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"chains":[{"assigned_by":"UniProtKB","range":{"end":424,"start":21}}],"cv_annotations":{"biological_process":[{"annotations":[119000],"is_not":false,"summary":null,"term":"GO:0030995"},{"annotations":[88854],"is_not":false,"summary":null,"term":"GO:1904541"}],"cellular_component":[{"annotations":[88850],"is_not":false,"summary":null,"term":"GO:0005576"},{"annotations":[88851],"is_not":false,"summary":null,"term":"GO:1990819"}],"molecular_function":[{"annotations":[57847],"is_not":false,"summary":null,"term":"GO:0051118"}],"sequence":[{"annotations":[80304],"is_not":false,"summary":null,"term":"SO:0000418"}],"single_locus_phenotype":[{"annotations":[118999],"is_not":false,"summary":null,"term":"FYPO:0001971"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08298","UniProtKB/TrEMBL:B6K491","GOA:B6K491","InterPro:IPR005197","EnsemblGenomes-Gn:SJAG_03444"],"deletion_viability":"unknown","feature_publications":[{"reference_uniquename":"PMID:24699070","source":"canto"},{"reference_uniquename":"PMID:22300943","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03439"},{"name":"pex16","uniquename":"SJAG_03440"},{"name":"laf1","uniquename":"SJAG_03441"},{"name":"vtc2","uniquename":"SJAG_03442"},{"uniquename":"SJAG_03443"},{"name":"agn1","uniquename":"SJAG_03444"},{"uniquename":"SJAG_03445"},{"uniquename":"SJAG_03446"},{"uniquename":"SJAG_03447"},{"name":"nab2","uniquename":"SJAG_03448"},{"name":"man1","uniquename":"SJAG_03449"}],"genes_by_uniquename":{"SJAG_03444":null,"SPAC14C4.09":null},"genotypes_by_uniquename":{"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycosyl hydrolase family 71","id":"PF03659","interpro_description":"Glycoside hydrolase family 71","interpro_id":"IPR005197","interpro_name":"Glyco_hydro_71","locations":[{"end":398,"start":24}],"match_end":398,"match_start":24,"name":"Glyco_hydro_71"},{"dbname":"CDD","description":"GH71","id":"cd11577","interpro_description":"Glycoside hydrolase family 71","interpro_id":"IPR005197","interpro_name":"Glyco_hydro_71","locations":[{"end":303,"start":18}],"match_end":303,"match_start":18,"name":"GH71"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.80","locations":[{"end":306,"start":32}],"match_end":306,"match_start":32,"name":"Glycosidases"}],"location":{"chromosome_name":"supercont5.2","end_pos":1106666,"start_pos":1105392,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":14,"start":1}},{"range":{"end":83,"start":72}},{"range":{"end":199,"start":188}}],"name":"agn1","ortholog_annotations":[{"gene_uniquename":"SJAG_03444","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.09","reference_uniquename":"PMID:21511999"}],"product":"cell wall glucan endo-1,3-alpha-glucosidase Agn1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:22300943":null,"PMID:24699070":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":20,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0051118"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0001971"]}},"subset_termids":["GO:0000747","GO:0015629","GO:0005975","GO:0016798","GO:0005576","GO:0071554","FYPO:0001320"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYPO:0001971":null,"GO:0005576":null,"GO:0030995":null,"GO:0051118":null,"GO:1904541":null,"GO:1990819":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03444.1"],"transcripts_by_uniquename":{"SJAG_03444.1":null},"uniprot_identifier":"B6K491","uniquename":"SJAG_03444"}


id: SJAG_03445
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03445","EnsemblGenomes-Tr:EEB08299","UniProtKB/TrEMBL:B6K492"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pex16","uniquename":"SJAG_03440"},{"name":"laf1","uniquename":"SJAG_03441"},{"name":"vtc2","uniquename":"SJAG_03442"},{"uniquename":"SJAG_03443"},{"name":"agn1","uniquename":"SJAG_03444"},{"uniquename":"SJAG_03445"},{"uniquename":"SJAG_03446"},{"uniquename":"SJAG_03447"},{"name":"nab2","uniquename":"SJAG_03448"},{"name":"man1","uniquename":"SJAG_03449"},{"uniquename":"SJAG_03450"}],"genes_by_uniquename":{"SJAG_03445":null},"has_protein_features":true,"location":{"chromosome_name":"supercont5.2","end_pos":1107842,"start_pos":1107306,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":121,"start":109}}],"product":"Schizosaccharomyces japonicus specific protein","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_03445.1"],"transcripts_by_uniquename":{"SJAG_03445.1":null},"uniprot_identifier":"B6K492","uniquename":"SJAG_03445"}


id: SJAG_03446
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB08300","EnsemblGenomes-Gn:SJAG_03446","UniProtKB/TrEMBL:B6K493","InterPro:IPR013937"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"laf1","uniquename":"SJAG_03441"},{"name":"vtc2","uniquename":"SJAG_03442"},{"uniquename":"SJAG_03443"},{"name":"agn1","uniquename":"SJAG_03444"},{"uniquename":"SJAG_03445"},{"uniquename":"SJAG_03446"},{"uniquename":"SJAG_03447"},{"name":"nab2","uniquename":"SJAG_03448"},{"name":"man1","uniquename":"SJAG_03449"},{"uniquename":"SJAG_03450"},{"name":"orc5","uniquename":"SJAG_03451"}],"genes_by_uniquename":{"SJAG_03446":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sorting nexin C terminal","id":"PF08628","interpro_description":"Sorting nexin, C-terminal","interpro_id":"IPR013937","interpro_name":"Sorting_nexin_C","locations":[{"end":240,"start":135}],"match_end":240,"match_start":135,"name":"Nexin_C"}],"location":{"chromosome_name":"supercont5.2","end_pos":1110192,"start_pos":1109389,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":209,"start":199}}],"product":"sorting nexin, C-terminal","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_03446.1"],"transcripts_by_uniquename":{"SJAG_03446.1":null},"uniprot_identifier":"B6K493","uniquename":"SJAG_03446"}


id: SJAG_03447
data:
  {"cv_annotations":{"biological_process":[{"annotations":[69536],"is_not":false,"summary":null,"term":"GO:0055085"}],"cellular_component":[{"annotations":[88846],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[88847],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[69535],"is_not":false,"summary":null,"term":"GO:0022857"}],"mondo":[{"annotations":[85113],"is_not":false,"summary":null,"term":"MONDO:0009238"}]},"dbxrefs":["InterPro:IPR036259","GOA:B6K494","UniProtKB/TrEMBL:B6K494","EnsemblGenomes-Gn:SJAG_03447","InterPro:IPR011701","EnsemblGenomes-Tr:EEB08301"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":64,"start":24}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vtc2","uniquename":"SJAG_03442"},{"uniquename":"SJAG_03443"},{"name":"agn1","uniquename":"SJAG_03444"},{"uniquename":"SJAG_03445"},{"uniquename":"SJAG_03446"},{"uniquename":"SJAG_03447"},{"name":"nab2","uniquename":"SJAG_03448"},{"name":"man1","uniquename":"SJAG_03449"},{"uniquename":"SJAG_03450"},{"name":"orc5","uniquename":"SJAG_03451"},{"name":"leu5","uniquename":"SJAG_03452"}],"genes_by_uniquename":{"HGNC:16055":null,"HGNC:30521":null,"SJAG_03447":null,"SPAC14C4.07":null,"YJL163C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Major Facilitator Superfamily","id":"PF07690","interpro_description":"Major facilitator superfamily","interpro_id":"IPR011701","interpro_name":"MFS","locations":[{"end":404,"start":78}],"match_end":404,"match_start":78,"name":"MFS_1"},{"dbname":"SUPERFAMILY","id":"SSF103473","interpro_description":"MFS transporter superfamily","interpro_id":"IPR036259","interpro_name":"MFS_trans_sf","locations":[{"end":292,"start":133},{"end":405,"start":325},{"end":583,"start":467}],"match_end":583,"match_start":133,"name":"MFS general substrate transporter"},{"dbname":"GENE3D","id":"G3DSA:1.20.1250.20","interpro_description":"MFS transporter superfamily","interpro_id":"IPR036259","interpro_name":"MFS_trans_sf","locations":[{"end":299,"start":121},{"end":410,"start":337},{"end":583,"start":456}],"match_end":583,"match_start":121,"name":"MFS general substrate transporter like domains"},{"dbname":"PANTHER","id":"PTHR23507","locations":[{"end":581,"start":43}],"match_end":581,"match_start":43,"name":"ZGC:174356"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":64,"start":24}],"match_end":64,"match_start":24,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":45,"start":24}],"match_end":45,"match_start":24,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1111978,"start_pos":1110206,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":58,"start":45}},{"range":{"end":147,"start":132}},{"range":{"end":394,"start":373}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_03447","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16055","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03447","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30521","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03447","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03447","ortholog_taxonid":4932,"ortholog_uniquename":"YJL163C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03447","ortholog_taxonid":4932,"ortholog_uniquename":"YJL163C","reference_uniquename":"PMID:26896847"}],"product":"transmembrane transporter","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0022857"]}},"subset_termids":["MONDO:0004335","GO:0022857","GO:0005794","GO:0005773","MONDO:0002280","MONDO:0005066","MONDO:0005570","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0005794":null,"GO:0022857":null,"GO:0055085":null,"MONDO:0009238":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":96,"start":74}},{"assigned_by":"TMHMM","range":{"end":153,"start":131}},{"assigned_by":"TMHMM","range":{"end":184,"start":162}},{"assigned_by":"TMHMM","range":{"end":210,"start":188}},{"assigned_by":"TMHMM","range":{"end":245,"start":223}},{"assigned_by":"TMHMM","range":{"end":277,"start":255}},{"assigned_by":"TMHMM","range":{"end":366,"start":344}},{"assigned_by":"TMHMM","range":{"end":408,"start":386}},{"assigned_by":"TMHMM","range":{"end":488,"start":469}},{"assigned_by":"TMHMM","range":{"end":520,"start":498}},{"assigned_by":"TMHMM","range":{"end":546,"start":527}},{"assigned_by":"TMHMM","range":{"end":583,"start":561}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03447.1"],"transcripts_by_uniquename":{"SJAG_03447.1":null},"uniprot_identifier":"B6K494","uniquename":"SJAG_03447"}


id: SJAG_03448
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88842],"is_not":false,"summary":null,"term":"GO:0071028"}],"cellular_component":[{"annotations":[88839],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[88840],"is_not":false,"summary":null,"term":"GO:0005635"}],"molecular_function":[{"annotations":[88843],"is_not":false,"summary":null,"term":"GO:0008143"},{"annotations":[88844],"is_not":false,"summary":null,"term":"GO:0036002"},{"annotations":[67377],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[86916],"is_not":false,"summary":null,"term":"MONDO:0014930"}]},"dbxrefs":["GOA:B6K495","EnsemblGenomes-Gn:SJAG_03448","InterPro:IPR040366","EnsemblGenomes-Tr:EEB08302","UniProtKB/TrEMBL:B6K495"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":124,"start":81}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03443"},{"name":"agn1","uniquename":"SJAG_03444"},{"uniquename":"SJAG_03445"},{"uniquename":"SJAG_03446"},{"uniquename":"SJAG_03447"},{"name":"nab2","uniquename":"SJAG_03448"},{"name":"man1","uniquename":"SJAG_03449"},{"uniquename":"SJAG_03450"},{"name":"orc5","uniquename":"SJAG_03451"},{"name":"leu5","uniquename":"SJAG_03452"},{"name":"ras1","uniquename":"SJAG_03453"}],"genes_by_uniquename":{"HGNC:20509":null,"SJAG_03448":null,"SPAC14C4.06c":null,"YGL122C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nab2-type CCCH zinc finger 4","id":"PF21803","interpro_description":"Nab2, type CCCH zinc finger 4","interpro_id":"IPR049017","interpro_name":"Nab2_Znf4","locations":[{"end":221,"start":194}],"match_end":221,"match_start":194,"name":"Nab2-zf4"},{"dbname":"GENE3D","id":"G3DSA:4.10.1000.40","locations":[{"end":232,"start":166}],"match_end":232,"match_start":166},{"dbname":"GENE3D","id":"G3DSA:1.10.340.40","interpro_description":"Nab2/ZC3H14, N-terminal domain superfamily","interpro_id":"IPR043094","interpro_name":"Nab2/ZC3H14_N_sf","locations":[{"end":110,"start":5}],"match_end":110,"match_start":5},{"dbname":"PANTHER","id":"PTHR14738","interpro_description":"Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14","interpro_id":"IPR040366","interpro_name":"Nab2/ZC3H14","locations":[{"end":109,"start":7}],"match_end":109,"match_start":7,"name":"ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":124,"start":81}],"match_end":124,"match_start":81,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":91,"start":82},{"end":118,"start":109}],"match_end":118,"match_start":82,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":108,"start":92}],"match_end":108,"match_start":92,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1113661,"start_pos":1112678,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":256,"start":236}}],"name":"nab2","ortholog_annotations":[{"gene_uniquename":"SJAG_03448","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20509","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03448","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03448","ortholog_taxonid":4932,"ortholog_uniquename":"YGL122C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03448","ortholog_taxonid":4932,"ortholog_uniquename":"YGL122C","reference_uniquename":"PMID:26896847"}],"product":"nuclear poly(A) binding protein Nab2","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270","GO:0008143","GO:0036002"]}},"subset_termids":["GO:0005634","GO:0016071","MONDO:0005066","MONDO:0006025","MONDO:0037792"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005635":null,"GO:0005737":null,"GO:0008143":null,"GO:0008270":null,"GO:0036002":null,"GO:0071028":null,"MONDO:0014930":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03448.1"],"transcripts_by_uniquename":{"SJAG_03448.1":null},"uniprot_identifier":"B6K495","uniquename":"SJAG_03448"}


id: SJAG_03449
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"cv_annotations":{"biological_process":[{"annotations":[88834],"is_not":false,"summary":null,"term":"GO:0140698"},{"annotations":[119288],"is_not":false,"summary":null,"term":"GO:0101024"}],"cellular_component":[{"annotations":[88828],"is_not":false,"summary":null,"term":"GO:0034506"},{"annotations":[88829],"is_not":false,"summary":null,"term":"GO:0099115"},{"annotations":[88830],"is_not":false,"summary":null,"term":"GO:0000792"},{"annotations":[69943],"is_not":false,"summary":null,"term":"GO:0005637"},{"annotations":[69942],"is_not":false,"summary":null,"term":"GO:0034399"},{"annotations":[119275],"is_not":false,"summary":null,"term":"GO:0005643"}],"molecular_function":[{"annotations":[88836],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[57412],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[119289],"is_not":false,"summary":null,"term":"GO:0062239"}],"mondo":[{"annotations":[85116],"is_not":false,"summary":null,"term":"MONDO:0008157"}],"single_locus_phenotype":[{"annotations":[119276,119281,119283],"is_not":false,"summary":null,"term":"FYPO:0003779"},{"annotations":[119285,119286,119287],"is_not":false,"summary":null,"term":"FYPO:0000671"},{"annotations":[119278,119280,119282],"is_not":false,"summary":null,"term":"FYPO:0004890"},{"annotations":[119277],"is_not":false,"summary":null,"term":"FYPO:0001234"},{"annotations":[119284],"is_not":false,"summary":null,"term":"FYPO:0004683"}]},"dbxrefs":["InterPro:IPR018996","UniProtKB/TrEMBL:B6K496","GOA:B6K496","InterPro:IPR025856","EnsemblGenomes-Gn:SJAG_03449","EnsemblGenomes-Tr:EEB08303"],"deletion_viability":"viable","disordered_region_coords":[{"range":{"end":112,"start":56}},{"range":{"end":717,"start":656}}],"feature_publications":[{"reference_uniquename":"PMID:24184107","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"agn1","uniquename":"SJAG_03444"},{"uniquename":"SJAG_03445"},{"uniquename":"SJAG_03446"},{"uniquename":"SJAG_03447"},{"name":"nab2","uniquename":"SJAG_03448"},{"name":"man1","uniquename":"SJAG_03449"},{"uniquename":"SJAG_03450"},{"name":"orc5","uniquename":"SJAG_03451"},{"name":"leu5","uniquename":"SJAG_03452"},{"name":"ras1","uniquename":"SJAG_03453"},{"name":"ddb1","uniquename":"SJAG_03454"}],"genes_by_uniquename":{"HGNC:28887":null,"SJAG_03449":null,"SPAC14C4.05c":null,"YDR458C":null,"YML034W":null},"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"HeH/LEM domain","id":"PF12949","interpro_description":"HeH/LEM domain","interpro_id":"IPR025856","interpro_name":"HeH/LEM_domain","locations":[{"end":47,"start":13}],"match_end":47,"match_start":13,"name":"HeH"},{"dbname":"PFAM","description":"Man1-Src1p-C-terminal domain","id":"PF09402","interpro_description":"Man1/Src1-like, C-terminal","interpro_id":"IPR018996","interpro_name":"Man1/Src1-like_C","locations":[{"end":1160,"start":831}],"match_end":1160,"match_start":831,"name":"MSC"},{"dbname":"CDD","description":"LEM_like","id":"cd12935","locations":[{"end":47,"start":13}],"match_end":47,"match_start":13,"name":"LEM_like"},{"dbname":"PANTHER","id":"PTHR47808","interpro_description":"Heh2/Src1-like","interpro_id":"IPR044780","interpro_name":"Heh2/Src1","locations":[{"end":1170,"start":1}],"match_end":1170,"match_start":1,"name":"INNER NUCLEAR MEMBRANE PROTEIN HEH2-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":112,"start":56},{"end":717,"start":656}],"match_end":717,"match_start":56,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":698,"start":667}],"match_end":698,"match_start":667,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":666,"start":657}],"match_end":666,"match_start":657,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":87,"start":71},{"end":105,"start":95}],"match_end":105,"match_start":71,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1117812,"start_pos":1114211,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":386,"start":379}},{"range":{"end":459,"start":437}},{"range":{"end":488,"start":475}},{"range":{"end":644,"start":623}},{"range":{"end":678,"start":666}},{"range":{"end":698,"start":682}},{"range":{"end":774,"start":762}},{"range":{"end":1051,"start":1031}}],"name":"man1","ortholog_annotations":[{"gene_uniquename":"SJAG_03449","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28887","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03449","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03449","ortholog_taxonid":4932,"ortholog_uniquename":"YDR458C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03449","ortholog_taxonid":4932,"ortholog_uniquename":"YML034W","reference_uniquename":"PMID:29761456"}],"product":"LEM domain nuclear inner membrane protein Man1, Sad1 interacting factor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:24184107":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003682","GO:0005524"],"not-binding":["GO:0062239"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0003779","FYPO:0004890","FYPO:0004683","FYPO:0000671"],"population_phenotype":["FYPO:0001234"]}},"subset_termids":["GO:0061024","GO:0005643","FYPO:0002058","GO:0005694","FYPO:0000631","FYPO:0000641","FYPO:0000138","FYPO:0000139","FYPO:0000337","GO:0034399","FYPO:0002403","FYPO:0001320","GO:0060090","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0000671":null,"FYPO:0001234":null,"FYPO:0003779":null,"FYPO:0004683":null,"FYPO:0004890":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null,"GO:0000792":null,"GO:0003682":null,"GO:0005524":null,"GO:0005637":null,"GO:0005643":null,"GO:0034399":null,"GO:0034506":null,"GO:0062239":null,"GO:0099115":null,"GO:0101024":null,"GO:0140698":null,"MONDO:0008157":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":1052,"start":1030}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03449.1"],"transcripts_by_uniquename":{"SJAG_03449.1":null},"uniprot_identifier":"B6K496","uniquename":"SJAG_03449"}


id: SJAG_03450
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[88825],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[88826],"is_not":false,"summary":null,"term":"GO:0005794"}],"molecular_function":[{"annotations":[88827],"is_not":false,"summary":null,"term":"GO:0003824"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08304","InterPro:IPR029062","InterPro:IPR032633","UniProtKB/TrEMBL:B6K497","EnsemblGenomes-Gn:SJAG_03450"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03445"},{"uniquename":"SJAG_03446"},{"uniquename":"SJAG_03447"},{"name":"nab2","uniquename":"SJAG_03448"},{"name":"man1","uniquename":"SJAG_03449"},{"uniquename":"SJAG_03450"},{"name":"orc5","uniquename":"SJAG_03451"},{"name":"leu5","uniquename":"SJAG_03452"},{"name":"ras1","uniquename":"SJAG_03453"},{"name":"ddb1","uniquename":"SJAG_03454"},{"name":"gmf1","uniquename":"SJAG_03455"}],"genes_by_uniquename":{"SJAG_03450":null,"SPAC14C4.04":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ThiJ/PfpI family-like","id":"PF17124","interpro_description":"ThiJ/PfpI family-like","interpro_id":"IPR032633","interpro_name":"ThiJ-like","locations":[{"end":228,"start":45}],"match_end":228,"match_start":45,"name":"ThiJ_like"},{"dbname":"SUPERFAMILY","id":"SSF52317","interpro_description":"Class I glutamine amidotransferase-like","interpro_id":"IPR029062","interpro_name":"Class_I_gatase-like","locations":[{"end":159,"start":39}],"match_end":159,"match_start":39,"name":"Class I glutamine amidotransferase-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.880","interpro_description":"Class I glutamine amidotransferase-like","interpro_id":"IPR029062","interpro_name":"Class_I_gatase-like","locations":[{"end":261,"start":15}],"match_end":261,"match_start":15},{"dbname":"PANTHER","id":"PTHR43068","locations":[{"end":265,"start":19}],"match_end":265,"match_start":19,"name":"SLR1854 PROTEIN"}],"location":{"chromosome_name":"supercont5.2","end_pos":1118926,"start_pos":1118123,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_03450","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC14C4.04","reference_uniquename":"PMID:21511999"}],"product":"ThiJ domain protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003824"]}},"subset_termids":["GO:0005794","GO:0005773"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0003824":null,"GO:0005794":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03450.1"],"transcripts_by_uniquename":{"SJAG_03450.1":null},"uniprot_identifier":"B6K497","uniquename":"SJAG_03450"}


id: SJAG_03451
data:
  {"cv_annotations":{"biological_process":[{"annotations":[111134],"is_not":false,"summary":null,"term":"GO:1902975"}],"cellular_component":[{"annotations":[111127],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[111128],"is_not":false,"summary":null,"term":"GO:0031261"},{"annotations":[78444],"is_not":false,"summary":null,"term":"GO:0005664"},{"annotations":[111131],"is_not":false,"summary":null,"term":"GO:0005656"},{"annotations":[111132],"is_not":false,"summary":null,"term":"GO:0043596"}],"molecular_function":[{"annotations":[111135],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[111136],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[111137],"is_not":false,"summary":null,"term":"GO:0003688"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03451","EnsemblGenomes-Tr:EEB08305","InterPro:IPR041664","InterPro:IPR020796","InterPro:IPR027417","UniProtKB/TrEMBL:B6K498","GOA:B6K498"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03446"},{"uniquename":"SJAG_03447"},{"name":"nab2","uniquename":"SJAG_03448"},{"name":"man1","uniquename":"SJAG_03449"},{"uniquename":"SJAG_03450"},{"name":"orc5","uniquename":"SJAG_03451"},{"name":"leu5","uniquename":"SJAG_03452"},{"name":"ras1","uniquename":"SJAG_03453"},{"name":"ddb1","uniquename":"SJAG_03454"},{"name":"gmf1","uniquename":"SJAG_03455"},{"name":"cyc2","uniquename":"SJAG_03456"}],"genes_by_uniquename":{"HGNC:8491":null,"SJAG_03451":null,"SPBC646.14c":null,"YNL261W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Origin recognition complex (ORC) subunit 5 C-terminus","id":"PF14630","interpro_description":"Origin recognition complex subunit 5, C-terminal","interpro_id":"IPR047088","interpro_name":"ORC5_C","locations":[{"end":447,"start":298}],"match_end":447,"match_start":298,"name":"ORC5_C"},{"dbname":"PFAM","description":"AAA ATPase domain","id":"PF13191","interpro_description":"Orc1-like, AAA ATPase domain","interpro_id":"IPR041664","interpro_name":"AAA_16","locations":[{"end":152,"start":13}],"match_end":152,"match_start":13,"name":"AAA_16"},{"dbname":"PFAM","description":"ORC5, lid domain","id":"PF21639","interpro_description":"ORC5, lid domain","interpro_id":"IPR048866","interpro_name":"ORC5_lid","locations":[{"end":268,"start":213}],"match_end":268,"match_start":213,"name":"ORC5_lid"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":194,"start":6},{"end":268,"start":251}],"match_end":268,"match_start":6,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":169,"start":14}],"match_end":169,"match_start":14},{"dbname":"PANTHER","id":"PTHR12705","interpro_description":"Origin recognition complex, subunit 5","interpro_id":"IPR020796","interpro_name":"ORC5","locations":[{"end":449,"start":8}],"match_end":449,"match_start":8,"name":"ORIGIN RECOGNITION COMPLEX SUBUNIT 5"}],"location":{"chromosome_name":"supercont5.2","end_pos":1121000,"start_pos":1119512,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":364,"start":351}}],"name":"orc5","ortholog_annotations":[{"gene_uniquename":"SJAG_03451","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8491","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03451","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC646.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03451","ortholog_taxonid":4932,"ortholog_uniquename":"YNL261W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03451","ortholog_taxonid":4932,"ortholog_uniquename":"YNL261W","reference_uniquename":"PMID:26896847"}],"product":"origin recognition complex subunit Orc5","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003688","GO:0005524"],"not-binding":["GO:0016887"]}},"subset_termids":["GO:0006260","GO:0005634","GO:0016887","GO:0005654","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003688":null,"GO:0005524":null,"GO:0005656":null,"GO:0005664":null,"GO:0016887":null,"GO:0031261":null,"GO:0043596":null,"GO:1902975":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03451.1"],"transcripts_by_uniquename":{"SJAG_03451.1":null},"uniprot_identifier":"B6K498","uniquename":"SJAG_03451"}


id: SJAG_03452
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70279],"is_not":false,"summary":null,"term":"GO:1990559"}],"cellular_component":[{"annotations":[70278],"is_not":false,"summary":null,"term":"GO:0005743"}],"molecular_function":[{"annotations":[70280],"is_not":false,"summary":null,"term":"GO:0015228"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08306","GOA:B6K499","InterPro:IPR018108","EnsemblGenomes-Gn:SJAG_03452","InterPro:IPR023395","UniProtKB/TrEMBL:B6K499","InterPro:IPR002067"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03447"},{"name":"nab2","uniquename":"SJAG_03448"},{"name":"man1","uniquename":"SJAG_03449"},{"uniquename":"SJAG_03450"},{"name":"orc5","uniquename":"SJAG_03451"},{"name":"leu5","uniquename":"SJAG_03452"},{"name":"ras1","uniquename":"SJAG_03453"},{"name":"ddb1","uniquename":"SJAG_03454"},{"name":"gmf1","uniquename":"SJAG_03455"},{"name":"cyc2","uniquename":"SJAG_03456"},{"name":"pro2","uniquename":"SJAG_03457"}],"genes_by_uniquename":{"HGNC:10986":null,"SJAG_03452":null,"SPAC17H9.08":null,"YHR002W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mitochondrial carrier protein","id":"PF00153","interpro_description":"Mitochondrial substrate/solute carrier","interpro_id":"IPR018108","interpro_name":"Mitochondrial_sb/sol_carrier","locations":[{"end":109,"start":18},{"end":218,"start":114},{"end":327,"start":237}],"match_end":327,"match_start":18,"name":"Mito_carr"},{"dbname":"PROSITE_PROFILES","description":"Solute carrier (Solcar) repeat profile.","id":"PS50920","interpro_description":"Mitochondrial substrate/solute carrier","interpro_id":"IPR018108","interpro_name":"Mitochondrial_sb/sol_carrier","locations":[{"end":107,"start":16},{"end":215,"start":115},{"end":325,"start":237}],"match_end":325,"match_start":16,"name":"SOLCAR"},{"dbname":"PROSITE_PROFILES","description":"Prokaryotic membrane lipoprotein lipid attachment site profile.","id":"PS51257","locations":[{"end":30,"start":1}],"match_end":30,"match_start":1,"name":"PROKAR_LIPOPROTEIN"},{"dbname":"PRINTS","description":"Mitochondrial carrier protein signature","id":"PR00926","interpro_description":"Mitochondrial carrier protein","interpro_id":"IPR002067","interpro_name":"Mit_carrier","locations":[{"end":48,"start":21},{"end":102,"start":82},{"end":148,"start":130},{"end":206,"start":188},{"end":268,"start":246}],"match_end":268,"match_start":21,"name":"MITOCARRIER"},{"dbname":"SUPERFAMILY","id":"SSF103506","interpro_description":"Mitochondrial carrier domain superfamily","interpro_id":"IPR023395","interpro_name":"Mt_carrier_dom_sf","locations":[{"end":319,"start":19}],"match_end":319,"match_start":19,"name":"Mitochondrial carrier"},{"dbname":"GENE3D","id":"G3DSA:1.50.40.10","interpro_description":"Mitochondrial carrier domain superfamily","interpro_id":"IPR023395","interpro_name":"Mt_carrier_dom_sf","locations":[{"end":327,"start":13}],"match_end":327,"match_start":13,"name":"Mitochondrial carrier domain"},{"dbname":"PANTHER","id":"PTHR24089","locations":[{"end":328,"start":14}],"match_end":328,"match_start":14,"name":"SOLUTE CARRIER FAMILY 25"}],"location":{"chromosome_name":"supercont5.2","end_pos":1123016,"start_pos":1121928,"strand":"forward"},"name":"leu5","ortholog_annotations":[{"gene_uniquename":"SJAG_03452","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10986","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03452","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03452","ortholog_taxonid":4932,"ortholog_uniquename":"YHR002W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03452","ortholog_taxonid":4932,"ortholog_uniquename":"YHR002W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial carrier, coenzyme A, Leu5","references_by_uniquename":{"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0015228"]}},"subset_termids":["GO:0022857","GO:0005739","GO:0055085"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005743":null,"GO:0015228":null,"GO:1990559":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":202,"start":180}},{"assigned_by":"TMHMM","range":{"end":318,"start":296}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03452.1"],"transcripts_by_uniquename":{"SJAG_03452.1":null},"uniprot_identifier":"B6K499","uniquename":"SJAG_03452"}


id: SJAG_03453
data:
  {"alleles_by_uniquename":{"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[90608],"is_not":false,"summary":null,"term":"GO:0030010"},{"annotations":[90611],"is_not":false,"summary":null,"term":"GO:1902917"},{"annotations":[90612],"is_not":false,"summary":null,"term":"GO:0062038"},{"annotations":[90613],"is_not":false,"summary":null,"term":"GO:0042307"},{"annotations":[90614],"is_not":false,"summary":null,"term":"GO:0072659"},{"annotations":[90616],"is_not":false,"summary":null,"term":"GO:0032005"}],"cellular_component":[{"annotations":[90597],"is_not":false,"summary":null,"term":"GO:0071521"},{"annotations":[90598],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[90600],"is_not":false,"summary":null,"term":"GO:0090726"},{"annotations":[90602],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90603],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[90604],"is_not":false,"summary":null,"term":"GO:1990819"},{"annotations":[90605],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[72039],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[90617],"is_not":false,"summary":null,"term":"GO:0002135"},{"annotations":[90618],"is_not":false,"summary":null,"term":"GO:0003925"},{"annotations":[72041],"is_not":false,"summary":null,"term":"GO:0019003"},{"annotations":[72038],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[90622],"is_not":false,"summary":null,"term":"GO:0043539"},{"annotations":[90623],"is_not":false,"summary":null,"term":"GO:0002134"}],"mondo":[{"annotations":[86978],"is_not":false,"summary":null,"term":"MONDO:0018874"},{"annotations":[85471],"is_not":false,"summary":null,"term":"MONDO:0007154"},{"annotations":[86422],"is_not":false,"summary":null,"term":"MONDO:0013767"},{"annotations":[84798],"is_not":false,"summary":null,"term":"MONDO:0014112"},{"annotations":[86251],"is_not":false,"summary":null,"term":"MONDO:0005575"},{"annotations":[84962],"is_not":false,"summary":null,"term":"MONDO:0009026"},{"annotations":[86819],"is_not":false,"summary":null,"term":"MONDO:0001056"},{"annotations":[85972],"is_not":false,"summary":null,"term":"MONDO:0016419"},{"annotations":[86564],"is_not":false,"summary":null,"term":"MONDO:0044792"},{"annotations":[85656],"is_not":false,"summary":null,"term":"MONDO:0008097"},{"annotations":[86577],"is_not":false,"summary":null,"term":"MONDO:0008903"},{"annotations":[85236],"is_not":false,"summary":null,"term":"MONDO:0009578"},{"annotations":[84813],"is_not":false,"summary":null,"term":"MONDO:0008093"},{"annotations":[86419],"is_not":false,"summary":null,"term":"MONDO:0012371"},{"annotations":[86216],"is_not":false,"summary":null,"term":"MONDO:0013186"},{"annotations":[85628],"is_not":false,"summary":null,"term":"MONDO:0008566"},{"annotations":[86910],"is_not":false,"summary":null,"term":"MONDO:0010854"},{"annotations":[86060],"is_not":false,"summary":null,"term":"MONDO:0001187"}],"single_locus_phenotype":[{"annotations":[118861],"is_not":false,"summary":null,"term":"FYPO:0007789"},{"annotations":[118858],"is_not":false,"summary":null,"term":"FYPO:0001355"},{"annotations":[118860],"is_not":false,"summary":null,"term":"FYPO:0000280"},{"annotations":[118859],"is_not":false,"summary":null,"term":"FYPO:0002380"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03453","UniProtKB/TrEMBL:B6K4A0","EnsemblGenomes-Tr:EEB08307","InterPro:IPR005225","GOA:B6K4A0","InterPro:IPR001806","InterPro:IPR020849","InterPro:IPR027417"],"deletion_viability":"viable","disordered_region_coords":[{"range":{"end":207,"start":177}}],"feature_publications":[{"reference_uniquename":"PMID:29566183","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nab2","uniquename":"SJAG_03448"},{"name":"man1","uniquename":"SJAG_03449"},{"uniquename":"SJAG_03450"},{"name":"orc5","uniquename":"SJAG_03451"},{"name":"leu5","uniquename":"SJAG_03452"},{"name":"ras1","uniquename":"SJAG_03453"},{"name":"ddb1","uniquename":"SJAG_03454"},{"name":"gmf1","uniquename":"SJAG_03455"},{"name":"cyc2","uniquename":"SJAG_03456"},{"name":"pro2","uniquename":"SJAG_03457"},{"name":"nop52","uniquename":"SJAG_03458"}],"genes_by_uniquename":{"HGNC:5173":null,"HGNC:6407":null,"HGNC:7989":null,"SJAG_03453":null,"SPAC17H9.09c":null,"YNL098C":null,"YOR101W":null},"genotypes_by_uniquename":{"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ras family","id":"PF00071","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":171,"start":11}],"match_end":171,"match_start":11,"name":"Ras"},{"dbname":"CDD","description":"H_N_K_Ras_like","id":"cd04138","locations":[{"end":171,"start":9}],"match_end":171,"match_start":9,"name":"H_N_K_Ras_like"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Rab1 family profile.","id":"PS51419","locations":[{"end":216,"start":3}],"match_end":216,"match_start":3,"name":"RAB"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Rho family profile.","id":"PS51420","locations":[{"end":170,"start":3}],"match_end":170,"match_start":3,"name":"RHO"},{"dbname":"PROSITE_PROFILES","description":"small GTPase Ras family profile.","id":"PS51421","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":219,"start":5}],"match_end":219,"match_start":5,"name":"RAS"},{"dbname":"SMART","id":"SM00174","interpro_description":"Small GTPase","interpro_id":"IPR001806","interpro_name":"Small_GTPase","locations":[{"end":173,"start":12}],"match_end":173,"match_start":12,"name":"rho_sub_3"},{"dbname":"SMART","id":"SM00176","locations":[{"end":218,"start":15}],"match_end":218,"match_start":15,"name":"ran_sub_2"},{"dbname":"SMART","id":"SM00173","locations":[{"end":173,"start":7}],"match_end":173,"match_start":7,"name":"ras_sub_4"},{"dbname":"SMART","id":"SM00175","locations":[{"end":173,"start":10}],"match_end":173,"match_start":10,"name":"rab_sub_5"},{"dbname":"PRINTS","description":"Transforming protein P21 ras signature","id":"PR00449","locations":[{"end":31,"start":10},{"end":72,"start":33},{"end":126,"start":113},{"end":170,"start":148}],"match_end":170,"match_start":10,"name":"RASTRNSFRMNG"},{"dbname":"FUNFAM","description":"Ras-like GTPase Ras1","id":"G3DSA:3.40.50.300:FF:000080","locations":[{"end":178,"start":4}],"match_end":178,"match_start":4},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":176,"start":8}],"match_end":176,"match_start":8,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":178,"start":4}],"match_end":178,"match_start":4},{"dbname":"PANTHER","id":"PTHR24070","interpro_description":"Small GTPase, Ras-type","interpro_id":"IPR020849","interpro_name":"Small_GTPase_Ras-type","locations":[{"end":184,"start":9}],"match_end":184,"match_start":9,"name":"RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":207,"start":177}],"match_end":207,"match_start":177,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"small GTP-binding protein domain","id":"TIGR00231","interpro_description":"Small GTP-binding domain","interpro_id":"IPR005225","interpro_name":"Small_GTP-bd","locations":[{"end":164,"start":8}],"match_end":164,"match_start":8,"name":"small_GTP"}],"location":{"chromosome_name":"supercont5.2","end_pos":1124087,"start_pos":1123314,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":20,"start":12}}],"name":"ras1","ortholog_annotations":[{"gene_uniquename":"SJAG_03453","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:5173","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03453","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:6407","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03453","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7989","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03453","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03453","ortholog_taxonid":4932,"ortholog_uniquename":"YNL098C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03453","ortholog_taxonid":4932,"ortholog_uniquename":"YNL098C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03453","ortholog_taxonid":4932,"ortholog_uniquename":"YOR101W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03453","ortholog_taxonid":4932,"ortholog_uniquename":"YOR101W","reference_uniquename":"PMID:26896847"}],"product":"GTPase Ras1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29566183":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0002135","GO:0019003","GO:0002134","GO:0005525"],"not-binding":["GO:0043539","GO:0003925"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0007789","FYPO:0000280","FYPO:0002380"],"population_phenotype":["FYPO:0001355"]}},"subset_termids":["GO:0005886","MONDO:0005267","FYPO:0000139","MONDO:0005046","GO:0098772","GO:0006913","GO:0005938","FYPO:0001320","GO:0005634","GO:0015629","FYPO:0000005","MONDO:0005328","MONDO:0004335","MONDO:0004992","MONDO:0005570","MONDO:0000426","FYPO:0002058","MONDO:0005093","GO:0005829","GO:0000935","GO:0000747","GO:0023052","GO:0030234","GO:0003924","FYPO:0000301","GO:0007163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000137":null,"FYPO:0000280":null,"FYPO:0001355":null,"FYPO:0002380":null,"FYPO:0007789":null,"GO:0000935":null,"GO:0002134":null,"GO:0002135":null,"GO:0003925":null,"GO:0005525":null,"GO:0005634":null,"GO:0005829":null,"GO:0005886":null,"GO:0019003":null,"GO:0030010":null,"GO:0032005":null,"GO:0042307":null,"GO:0043539":null,"GO:0051285":null,"GO:0062038":null,"GO:0071521":null,"GO:0072659":null,"GO:0090726":null,"GO:1902917":null,"GO:1990819":null,"MONDO:0001056":null,"MONDO:0001187":null,"MONDO:0005575":null,"MONDO:0007154":null,"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0008566":null,"MONDO:0008903":null,"MONDO:0009026":null,"MONDO:0009578":null,"MONDO:0010854":null,"MONDO:0012371":null,"MONDO:0013186":null,"MONDO:0013767":null,"MONDO:0014112":null,"MONDO:0016419":null,"MONDO:0018874":null,"MONDO:0044792":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03453.1"],"transcripts_by_uniquename":{"SJAG_03453.1":null},"uniprot_identifier":"B6K4A0","uniquename":"SJAG_03453"}


id: SJAG_03454
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90631],"is_not":false,"summary":null,"term":"GO:0000724"},{"annotations":[90632],"is_not":false,"summary":null,"term":"GO:0033621"},{"annotations":[70897],"is_not":false,"summary":null,"term":"GO:0043161"},{"annotations":[90634],"is_not":false,"summary":null,"term":"GO:0006283"}],"cellular_component":[{"annotations":[90624],"is_not":false,"summary":null,"term":"GO:0080008"},{"annotations":[90625],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[90626],"is_not":false,"summary":null,"term":"GO:0070912"},{"annotations":[90627],"is_not":false,"summary":null,"term":"GO:0070913"},{"annotations":[90628],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[70896],"is_not":false,"summary":null,"term":"GO:0035861"}],"mondo":[{"annotations":[86109],"is_not":false,"summary":null,"term":"MONDO:0859169"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K4A1","EnsemblGenomes-Tr:EEB08308","InterPro:IPR011047","EnsemblGenomes-Gn:SJAG_03454","InterPro:IPR004871","GOA:B6K4A1","InterPro:IPR015943","InterPro:IPR036322"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"man1","uniquename":"SJAG_03449"},{"uniquename":"SJAG_03450"},{"name":"orc5","uniquename":"SJAG_03451"},{"name":"leu5","uniquename":"SJAG_03452"},{"name":"ras1","uniquename":"SJAG_03453"},{"name":"ddb1","uniquename":"SJAG_03454"},{"name":"gmf1","uniquename":"SJAG_03455"},{"name":"cyc2","uniquename":"SJAG_03456"},{"name":"pro2","uniquename":"SJAG_03457"},{"name":"nop52","uniquename":"SJAG_03458"},{"name":"mrpl10","uniquename":"SJAG_03459"}],"genes_by_uniquename":{"HGNC:2717":null,"SJAG_03454":null,"SPAC17H9.10c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RSE1/DDB1/CPSF1 first beta-propeller","id":"PF10433","interpro_description":"RSE1/DDB1/CPSF1, first beta-propeller domain","interpro_id":"IPR018846","interpro_name":"Beta-prop_RSE1/DDB1/CPSF1_1st","locations":[{"end":347,"start":12}],"match_end":347,"match_start":12,"name":"Beta-prop_RSE1_1st"},{"dbname":"PFAM","description":"CPSF A subunit region","id":"PF03178","interpro_description":"Cleavage/polyadenylation specificity factor, A subunit, C-terminal","interpro_id":"IPR004871","interpro_name":"Cleavage/polyA-sp_fac_asu_C","locations":[{"end":1040,"start":739}],"match_end":1040,"match_start":739,"name":"CPSF_A"},{"dbname":"PFAM","description":"RSE1/DDB1/CPSF1 second beta-propeller","id":"PF23726","locations":[{"end":692,"start":393}],"match_end":692,"match_start":393,"name":"Beta-prop_RSE1_2nd"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":951,"start":740}],"match_end":951,"match_start":740,"name":"WD40 repeat-like"},{"dbname":"SUPERFAMILY","id":"SSF50960","locations":[{"end":644,"start":476}],"match_end":644,"match_start":476,"name":"TolB, C-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF50998","interpro_description":"Quinoprotein alcohol dehydrogenase-like superfamily","interpro_id":"IPR011047","interpro_name":"Quinoprotein_ADH-like_sf","locations":[{"end":238,"start":214},{"end":483,"start":274},{"end":568,"start":519}],"match_end":568,"match_start":214,"name":"Quinoprotein alcohol dehydrogenase-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":979,"start":3}],"match_end":979,"match_start":3},{"dbname":"GENE3D","id":"G3DSA:1.10.150.910","locations":[{"end":1078,"start":985}],"match_end":1078,"match_start":985},{"dbname":"PANTHER","id":"PTHR10644","interpro_description":"RSE1/DDB1/CFT1/CPSF1","interpro_id":"IPR050358","interpro_name":"RSE1/DDB1/CFT1/CPSF1","locations":[{"end":1054,"start":2}],"match_end":1054,"match_start":2,"name":"DNA REPAIR/RNA PROCESSING CPSF FAMILY"}],"location":{"chromosome_name":"supercont5.2","end_pos":1128268,"start_pos":1125032,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":244,"start":231}}],"name":"ddb1","ortholog_annotations":[{"gene_uniquename":"SJAG_03454","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2717","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03454","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.10c","reference_uniquename":"PMID:21511999"}],"product":"Cul4-RING E3 complex WD repeat protein subunit Ddb1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005730","GO:0016071","GO:0006281","GO:0006310","GO:0005829","GO:0005694","GO:0005634","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000724":null,"GO:0005730":null,"GO:0005829":null,"GO:0006283":null,"GO:0033621":null,"GO:0035861":null,"GO:0043161":null,"GO:0070912":null,"GO:0070913":null,"GO:0080008":null,"MONDO:0859169":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03454.1"],"transcripts_by_uniquename":{"SJAG_03454.1":null},"uniprot_identifier":"B6K4A1","uniquename":"SJAG_03454"}


id: SJAG_03455
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74268],"is_not":false,"summary":null,"term":"GO:0071846"},{"annotations":[74266],"is_not":false,"summary":null,"term":"GO:0034316"}],"cellular_component":[{"annotations":[74264],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[90636],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[62404],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[62403],"is_not":false,"summary":null,"term":"GO:0003779"},{"annotations":[74267],"is_not":false,"summary":null,"term":"GO:0071933"}]},"dbxrefs":["InterPro:IPR029006","UniProtKB/TrEMBL:B6K4A2","EnsemblGenomes-Gn:SJAG_03455","EnsemblGenomes-Tr:EEB08309","InterPro:IPR011171","GOA:B6K4A2","InterPro:IPR002108"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_03450"},{"name":"orc5","uniquename":"SJAG_03451"},{"name":"leu5","uniquename":"SJAG_03452"},{"name":"ras1","uniquename":"SJAG_03453"},{"name":"ddb1","uniquename":"SJAG_03454"},{"name":"gmf1","uniquename":"SJAG_03455"},{"name":"cyc2","uniquename":"SJAG_03456"},{"name":"pro2","uniquename":"SJAG_03457"},{"name":"nop52","uniquename":"SJAG_03458"},{"name":"mrpl10","uniquename":"SJAG_03459"},{"name":"lsm3","uniquename":"SJAG_03460"}],"genes_by_uniquename":{"HGNC:4373":null,"HGNC:4374":null,"SJAG_03455":null,"SPAC17H9.11":null,"YDR063W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cofilin/tropomyosin-type actin-binding protein","id":"PF00241","interpro_description":"Actin-depolymerising factor homology domain","interpro_id":"IPR002108","interpro_name":"ADF-H","locations":[{"end":138,"start":23}],"match_end":138,"match_start":23,"name":"Cofilin_ADF"},{"dbname":"CDD","description":"ADF_GMF-beta_like","id":"cd11283","interpro_description":"Glia maturation factor","interpro_id":"IPR011171","interpro_name":"GMF","locations":[{"end":132,"start":9}],"match_end":132,"match_start":9,"name":"ADF_GMF-beta_like"},{"dbname":"PROSITE_PROFILES","description":"ADF-H domain profile.","id":"PS51263","interpro_description":"Actin-depolymerising factor homology domain","interpro_id":"IPR002108","interpro_name":"ADF-H","locations":[{"end":141,"start":5}],"match_end":141,"match_start":5,"name":"ADF_H"},{"dbname":"SMART","id":"SM00102","interpro_description":"Actin-depolymerising factor homology domain","interpro_id":"IPR002108","interpro_name":"ADF-H","locations":[{"end":141,"start":14}],"match_end":141,"match_start":14,"name":"adf_2"},{"dbname":"SUPERFAMILY","id":"SSF55753","locations":[{"end":140,"start":4}],"match_end":140,"match_start":4,"name":"Actin depolymerizing proteins"},{"dbname":"GENE3D","id":"G3DSA:3.40.20.10","interpro_description":"ADF-H/Gelsolin-like domain superfamily","interpro_id":"IPR029006","interpro_name":"ADF-H/Gelsolin-like_dom_sf","locations":[{"end":141,"start":1}],"match_end":141,"match_start":1,"name":"Severin"},{"dbname":"PANTHER","id":"PTHR11249","interpro_description":"Glia maturation factor","interpro_id":"IPR011171","interpro_name":"GMF","locations":[{"end":140,"start":1}],"match_end":140,"match_start":1,"name":"GLIAL FACTOR NATURATION FACTOR"},{"dbname":"PIRSF","id":"PIRSF001788","interpro_description":"Glia maturation factor","interpro_id":"IPR011171","interpro_name":"GMF","locations":[{"end":141,"start":1}],"match_end":141,"match_start":1,"name":"GMF-beta"}],"location":{"chromosome_name":"supercont5.2","end_pos":1129450,"start_pos":1129025,"strand":"forward"},"name":"gmf1","ortholog_annotations":[{"gene_uniquename":"SJAG_03455","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4373","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03455","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4374","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03455","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03455","ortholog_taxonid":4932,"ortholog_uniquename":"YDR063W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03455","ortholog_taxonid":4932,"ortholog_uniquename":"YDR063W","reference_uniquename":"PMID:26896847"}],"product":"cofilin/tropomyosin family Glia Maturation Factor homolog Gmf1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0071933","GO:0003779"]}},"subset_termids":["GO:0030036","GO:0030479","GO:0005634","GO:0005938","GO:0003779","GO:0005829","GO:0015629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003779":null,"GO:0005634":null,"GO:0005829":null,"GO:0030479":null,"GO:0034316":null,"GO:0071846":null,"GO:0071933":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03455.1"],"transcripts_by_uniquename":{"SJAG_03455.1":null},"uniprot_identifier":"B6K4A2","uniquename":"SJAG_03455"}


id: SJAG_03456
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"FAD","range":{"end":83,"start":83}}],"cv_annotations":{"biological_process":[{"annotations":[90643],"is_not":false,"summary":null,"term":"GO:0007005"}],"cellular_component":[{"annotations":[90641],"is_not":false,"summary":null,"term":"GO:0031314"}],"molecular_function":[{"annotations":[60727],"is_not":false,"summary":null,"term":"GO:0016491"}]},"dbxrefs":["InterPro:IPR008333","EnsemblGenomes-Tr:EEB08310","InterPro:IPR017938","InterPro:IPR039261","UniProtKB/TrEMBL:B6K4A3","EnsemblGenomes-Gn:SJAG_03456"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"orc5","uniquename":"SJAG_03451"},{"name":"leu5","uniquename":"SJAG_03452"},{"name":"ras1","uniquename":"SJAG_03453"},{"name":"ddb1","uniquename":"SJAG_03454"},{"name":"gmf1","uniquename":"SJAG_03455"},{"name":"cyc2","uniquename":"SJAG_03456"},{"name":"pro2","uniquename":"SJAG_03457"},{"name":"nop52","uniquename":"SJAG_03458"},{"name":"mrpl10","uniquename":"SJAG_03459"},{"name":"lsm3","uniquename":"SJAG_03460"},{"name":"tuf1","uniquename":"SJAG_03461"}],"genes_by_uniquename":{"HGNC:32220":null,"SJAG_03456":null,"SPAC17H9.12c":null,"YOR037W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Oxidoreductase FAD-binding domain","id":"PF00970","interpro_description":"Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain","interpro_id":"IPR008333","interpro_name":"Cbr1-like_FAD-bd_dom","locations":[{"end":126,"start":70}],"match_end":126,"match_start":70,"name":"FAD_binding_6"},{"dbname":"SUPERFAMILY","id":"SSF63380","interpro_description":"Riboflavin synthase-like beta-barrel","interpro_id":"IPR017938","interpro_name":"Riboflavin_synthase-like_b-brl","locations":[{"end":126,"start":29}],"match_end":126,"match_start":29,"name":"Riboflavin synthase domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52343","interpro_description":"Ferredoxin-NADP reductase (FNR), nucleotide-binding domain","interpro_id":"IPR039261","interpro_name":"FNR_nucleotide-bd","locations":[{"end":231,"start":119}],"match_end":231,"match_start":119,"name":"Ferredoxin reductase-like, C-terminal NADP-linked domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.80","interpro_description":"Ferredoxin-NADP reductase (FNR), nucleotide-binding domain","interpro_id":"IPR039261","interpro_name":"FNR_nucleotide-bd","locations":[{"end":238,"start":122}],"match_end":238,"match_start":122},{"dbname":"GENE3D","id":"G3DSA:2.40.30.10","locations":[{"end":121,"start":24}],"match_end":121,"match_start":24,"name":"Translation factors"},{"dbname":"PANTHER","id":"PTHR19370","interpro_description":"NADH:cytochrome b5 reductase-like","interpro_id":"IPR001834","interpro_name":"CBR-like","locations":[{"end":241,"start":27}],"match_end":241,"match_start":27,"name":"NADH-CYTOCHROME B5 REDUCTASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":1130337,"start_pos":1129549,"strand":"reverse"},"name":"cyc2","ortholog_annotations":[{"gene_uniquename":"SJAG_03456","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:32220","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03456","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03456","ortholog_taxonid":4932,"ortholog_uniquename":"YOR037W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial cytochrome c-heme linkage protein Cyc2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016491"]}},"subset_termids":["GO:0007005","GO:0005739","GO:0016491"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0007005":null,"GO:0016491":null,"GO:0031314":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":24,"start":5}},{"assigned_by":"TMHMM","range":{"end":158,"start":139}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03456.1"],"transcripts_by_uniquename":{"SJAG_03456.1":null},"uniprot_identifier":"B6K4A3","uniquename":"SJAG_03456"}


id: SJAG_03457
data:
  {"cv_annotations":{"biological_process":[{"annotations":[90646],"is_not":false,"summary":null,"term":"GO:0006536"},{"annotations":[90647],"is_not":false,"summary":null,"term":"GO:0055129"}],"cellular_component":[{"annotations":[69921],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[57382],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[69923],"is_not":false,"summary":null,"term":"GO:0004349"},{"annotations":[57383],"is_not":false,"summary":null,"term":"GO:0003723"}],"mondo":[{"annotations":[87003],"is_not":false,"summary":null,"term":"MONDO:0009053"},{"annotations":[84791],"is_not":false,"summary":null,"term":"MONDO:0014702"},{"annotations":[85770],"is_not":false,"summary":null,"term":"MONDO:0014706"},{"annotations":[86263],"is_not":false,"summary":null,"term":"MONDO:0011006"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03457","InterPro:IPR019797","InterPro:IPR001057","InterPro:IPR005715","InterPro:IPR036393","InterPro:IPR041739","GOA:B6K4A4","InterPro:IPR001048","EnsemblGenomes-Tr:EEB08311","InterPro:IPR002478","InterPro:IPR011529","InterPro:IPR015947","InterPro:IPR036974","UniProtKB/TrEMBL:B6K4A4"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"leu5","uniquename":"SJAG_03452"},{"name":"ras1","uniquename":"SJAG_03453"},{"name":"ddb1","uniquename":"SJAG_03454"},{"name":"gmf1","uniquename":"SJAG_03455"},{"name":"cyc2","uniquename":"SJAG_03456"},{"name":"pro2","uniquename":"SJAG_03457"},{"name":"nop52","uniquename":"SJAG_03458"},{"name":"mrpl10","uniquename":"SJAG_03459"},{"name":"lsm3","uniquename":"SJAG_03460"},{"name":"tuf1","uniquename":"SJAG_03461"},{"name":"pfd1","uniquename":"SJAG_03463"}],"genes_by_uniquename":{"HGNC:9722":null,"SJAG_03457":null,"SPAC17H9.13c":null,"YDR300C":null,"YHR033W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Amino acid kinase family","id":"PF00696","interpro_description":"Aspartate/glutamate/uridylate kinase","interpro_id":"IPR001048","interpro_name":"Asp/Glu/Uridylate_kinase","locations":[{"end":241,"start":14}],"match_end":241,"match_start":14,"name":"AA_kinase"},{"dbname":"PFAM","description":"PUA domain","id":"PF01472","interpro_description":"PUA domain","interpro_id":"IPR002478","interpro_name":"PUA","locations":[{"end":372,"start":299}],"match_end":372,"match_start":299,"name":"PUA"},{"dbname":"CDD","description":"PUA_G5K","id":"cd21157","locations":[{"end":389,"start":286}],"match_end":389,"match_start":286,"name":"PUA_G5K"},{"dbname":"CDD","description":"AAK_G5K_ProB","id":"cd04242","interpro_description":"Glutamate-5-kinase domain","interpro_id":"IPR041739","interpro_name":"G5K_ProB","locations":[{"end":255,"start":15}],"match_end":255,"match_start":15,"name":"AAK_G5K_ProB"},{"dbname":"PROSITE_PATTERNS","description":"Glutamate 5-kinase signature.","id":"PS00902","interpro_description":"Glutamate 5-kinase, conserved site","interpro_id":"IPR019797","interpro_name":"Glutamate_5-kinase_CS","locations":[{"end":232,"start":215}],"match_end":232,"match_start":215,"name":"GLUTAMATE_5_KINASE"},{"dbname":"PROSITE_PROFILES","description":"PUA domain profile.","id":"PS50890","locations":[{"end":376,"start":298}],"match_end":376,"match_start":298,"name":"PUA"},{"dbname":"SMART","id":"SM00359","interpro_description":"PUA domain","interpro_id":"IPR002478","interpro_name":"PUA","locations":[{"end":382,"start":299}],"match_end":382,"match_start":299,"name":"pua_5"},{"dbname":"PRINTS","description":"Glutamate 5-kinase family signature","id":"PR00474","interpro_description":"Glutamate/acetylglutamate kinase","interpro_id":"IPR001057","interpro_name":"Glu/AcGlu_kinase","locations":[{"end":65,"start":51},{"end":113,"start":85},{"end":146,"start":125},{"end":184,"start":157},{"end":237,"start":217}],"match_end":237,"match_start":51,"name":"GLU5KINASE"},{"dbname":"FUNFAM","description":"Glutamate 5-kinase","id":"G3DSA:3.40.1160.10:FF:000020","locations":[{"end":204,"start":11}],"match_end":204,"match_start":11},{"dbname":"SUPERFAMILY","id":"SSF53633","interpro_description":"Acetylglutamate kinase-like superfamily","interpro_id":"IPR036393","interpro_name":"AceGlu_kinase-like_sf","locations":[{"end":256,"start":14}],"match_end":256,"match_start":14,"name":"Carbamate kinase-like"},{"dbname":"SUPERFAMILY","id":"SSF88697","interpro_description":"PUA-like superfamily","interpro_id":"IPR015947","interpro_name":"PUA-like_sf","locations":[{"end":389,"start":298}],"match_end":389,"match_start":298,"name":"PUA domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.1160.10","interpro_description":"Acetylglutamate kinase-like superfamily","interpro_id":"IPR036393","interpro_name":"AceGlu_kinase-like_sf","locations":[{"end":291,"start":10}],"match_end":291,"match_start":10},{"dbname":"GENE3D","id":"G3DSA:2.30.130.10","interpro_description":"PUA domain superfamily","interpro_id":"IPR036974","interpro_name":"PUA_sf","locations":[{"end":390,"start":292}],"match_end":390,"match_start":292,"name":"PUA domain"},{"dbname":"PANTHER","id":"PTHR43654","locations":[{"end":389,"start":9}],"match_end":389,"match_start":9,"name":"GLUTAMATE 5-KINASE"},{"dbname":"PIRSF","id":"PIRSF000729","interpro_description":"Glutamate 5-kinase","interpro_id":"IPR011529","interpro_name":"Glu_5kinase","locations":[{"end":391,"start":9}],"match_end":391,"match_start":9,"name":"GK"},{"dbname":"HAMAP","description":"Glutamate 5-kinase [proB].","id":"MF_00456","interpro_description":"Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase","interpro_id":"IPR005715","interpro_name":"Glu_5kinase/COase_Synthase","locations":[{"end":280,"start":13}],"match_end":280,"match_start":13,"name":"ProB"},{"dbname":"NCBIFAM","description":"glutamate 5-kinase","id":"TIGR01027","interpro_description":"Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase","interpro_id":"IPR005715","interpro_name":"Glu_5kinase/COase_Synthase","locations":[{"end":389,"start":15}],"match_end":389,"match_start":15,"name":"proB"}],"location":{"chromosome_name":"supercont5.2","end_pos":1131988,"start_pos":1130531,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":62,"start":52}},{"range":{"end":220,"start":209}}],"name":"pro2","ortholog_annotations":[{"gene_uniquename":"SJAG_03457","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9722","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03457","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC17H9.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03457","ortholog_taxonid":4932,"ortholog_uniquename":"YDR300C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03457","ortholog_taxonid":4932,"ortholog_uniquename":"YDR300C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03457","ortholog_taxonid":4932,"ortholog_uniquename":"YHR033W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03457","ortholog_taxonid":4932,"ortholog_uniquename":"YHR033W","reference_uniquename":"PMID:26896847"}],"product":"glutamate 5-kinase Pro2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0003723"],"not-binding":["GO:0004349"]}},"subset_termids":["MONDO:0000426","MONDO:0019303","MONDO:0005328","GO:0016301","MONDO:0006025","MONDO:0005066","GO:0005829","GO:0006520","MONDO:0004736","MONDO:0005559"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0004349":null,"GO:0005524":null,"GO:0005829":null,"GO:0006536":null,"GO:0055129":null,"MONDO:0009053":null,"MONDO:0011006":null,"MONDO:0014702":null,"MONDO:0014706":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03457.1"],"transcripts_by_uniquename":{"SJAG_03457.1":null},"uniprot_identifier":"B6K4A4","uniquename":"SJAG_03457"}


id: SJAG_03458
data:
  {"cv_annotations":{"biological_process":[{"annotations":[112645],"is_not":false,"summary":null,"term":"GO:1902626"},{"annotations":[68991],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[112641],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[68990],"is_not":false,"summary":null,"term":"GO:0030688"}]},"dbxrefs":["InterPro:IPR010301","EnsemblGenomes-Gn:SJAG_03458","EnsemblGenomes-Tr:EEB08312","GOA:B6K4A5","UniProtKB/TrEMBL:B6K4A5"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ras1","uniquename":"SJAG_03453"},{"name":"ddb1","uniquename":"SJAG_03454"},{"name":"gmf1","uniquename":"SJAG_03455"},{"name":"cyc2","uniquename":"SJAG_03456"},{"name":"pro2","uniquename":"SJAG_03457"},{"name":"nop52","uniquename":"SJAG_03458"},{"name":"mrpl10","uniquename":"SJAG_03459"},{"name":"lsm3","uniquename":"SJAG_03460"},{"name":"tuf1","uniquename":"SJAG_03461"},{"name":"pfd1","uniquename":"SJAG_03463"},{"name":"fis1","uniquename":"SJAG_03464"}],"genes_by_uniquename":{"HGNC:18785":null,"HGNC:23818":null,"SJAG_03458":null,"SPBC9B6.07":null,"YDR087C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Nucleolar protein,Nop52","id":"PF05997","interpro_description":"Ribosomal RNA processing protein 1","interpro_id":"IPR010301","interpro_name":"RRP1","locations":[{"end":207,"start":3}],"match_end":207,"match_start":3,"name":"Nop52"},{"dbname":"PANTHER","id":"PTHR13026","interpro_description":"Ribosomal RNA processing protein 1","interpro_id":"IPR010301","interpro_name":"RRP1","locations":[{"end":202,"start":3}],"match_end":202,"match_start":3,"name":"NNP-1 PROTEIN  NOVEL NUCLEAR PROTEIN 1   NOP52"}],"location":{"chromosome_name":"supercont5.2","end_pos":1133760,"start_pos":1132813,"strand":"reverse"},"name":"nop52","ortholog_annotations":[{"gene_uniquename":"SJAG_03458","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18785","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03458","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23818","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03458","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC9B6.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03458","ortholog_taxonid":4932,"ortholog_uniquename":"YDR087C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03458","ortholog_taxonid":4932,"ortholog_uniquename":"YDR087C","reference_uniquename":"PMID:26896847"}],"product":"nucleolar protein Nop52 family Rrp1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0042254","GO:0005634","GO:0030684","GO:0005730","GO:0065003"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0006364":null,"GO:0030688":null,"GO:1902626":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03458.1"],"transcripts_by_uniquename":{"SJAG_03458.1":null},"uniprot_identifier":"B6K4A5","uniquename":"SJAG_03458"}


id: SJAG_03459
data:
  {"cv_annotations":{"biological_process":[{"annotations":[112639],"is_not":false,"summary":null,"term":"GO:0032543"}],"cellular_component":[{"annotations":[79431],"is_not":false,"summary":null,"term":"GO:0005762"}],"molecular_function":[{"annotations":[79430],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08313","InterPro:IPR030878","InterPro:IPR036227","InterPro:IPR005749","InterPro:IPR021131","EnsemblGenomes-Gn:SJAG_03459","GOA:B6K4A6","UniProtKB/TrEMBL:B6K4A6"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":89,"start":52}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ddb1","uniquename":"SJAG_03454"},{"name":"gmf1","uniquename":"SJAG_03455"},{"name":"cyc2","uniquename":"SJAG_03456"},{"name":"pro2","uniquename":"SJAG_03457"},{"name":"nop52","uniquename":"SJAG_03458"},{"name":"mrpl10","uniquename":"SJAG_03459"},{"name":"lsm3","uniquename":"SJAG_03460"},{"name":"tuf1","uniquename":"SJAG_03461"},{"name":"pfd1","uniquename":"SJAG_03463"},{"name":"fis1","uniquename":"SJAG_03464"},{"name":"end3","uniquename":"SJAG_03465"}],"genes_by_uniquename":{"HGNC:14054":null,"SJAG_03459":null,"SPBC9B6.06":null,"YNL284C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A","id":"PF00828","interpro_description":"Large ribosomal subunit protein uL15/eL18","interpro_id":"IPR021131","interpro_name":"Ribosomal_uL15/eL18","locations":[{"end":188,"start":64}],"match_end":188,"match_start":64,"name":"Ribosomal_L27A"},{"dbname":"SUPERFAMILY","id":"SSF52080","interpro_description":"Large ribosomal subunit protein uL15/eL18 superfamily","interpro_id":"IPR036227","interpro_name":"Ribosomal_uL15/eL18_sf","locations":[{"end":192,"start":48}],"match_end":192,"match_start":48,"name":"Ribosomal proteins L15p and L18e"},{"dbname":"GENE3D","id":"G3DSA:3.100.10.10","locations":[{"end":192,"start":108}],"match_end":192,"match_start":108},{"dbname":"PANTHER","id":"PTHR12934","interpro_description":"Large ribosomal subunit protein uL15, bacterial-type","interpro_id":"IPR005749","interpro_name":"Ribosomal_uL15_bac-type","locations":[{"end":237,"start":42}],"match_end":237,"match_start":42,"name":"50S RIBOSOMAL PROTEIN L15"},{"dbname":"HAMAP","description":"Large ribosomal subunit protein uL15 [rplO].","id":"MF_01341","interpro_description":"Large ribosomal subunit protein uL15","interpro_id":"IPR030878","interpro_name":"Ribosomal_uL15","locations":[{"end":191,"start":42}],"match_end":191,"match_start":42,"name":"Ribosomal_L15"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":89,"start":52}],"match_end":89,"match_start":52,"name":"disorder_prediction"},{"dbname":"MOBIDB-Glycine-rich","description":"consensus disorder prediction","id":"mobidb-lite-Glycine-rich","locations":[{"end":68,"start":58}],"match_end":68,"match_start":58,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":84,"start":70}],"match_end":84,"match_start":70,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"50S ribosomal protein L15","id":"TIGR01071","interpro_description":"Large ribosomal subunit protein uL15, bacterial-type","interpro_id":"IPR005749","interpro_name":"Ribosomal_uL15_bac-type","locations":[{"end":188,"start":48}],"match_end":188,"match_start":48,"name":"rplO_bact"}],"location":{"chromosome_name":"supercont5.2","end_pos":1134954,"start_pos":1134169,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":89,"start":52}},{"range":{"end":183,"start":172}}],"name":"mrpl10","ortholog_annotations":[{"gene_uniquename":"SJAG_03459","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14054","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03459","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC9B6.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03459","ortholog_taxonid":4932,"ortholog_uniquename":"YNL284C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03459","ortholog_taxonid":4932,"ortholog_uniquename":"YNL284C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial ribosomal protein subunit L15","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0140053","GO:0005198","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003735":null,"GO:0005762":null,"GO:0032543":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03459.1"],"transcripts_by_uniquename":{"SJAG_03459.1":null},"uniprot_identifier":"B6K4A6","uniquename":"SJAG_03459"}


id: SJAG_03460
data:
  {"cv_annotations":{"biological_process":[{"annotations":[61879],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[112632],"is_not":false,"summary":null,"term":"GO:0033962"}],"cellular_component":[{"annotations":[112618],"is_not":false,"summary":null,"term":"GO:0071013"},{"annotations":[112619],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[112620],"is_not":false,"summary":null,"term":"GO:1990726"},{"annotations":[112621],"is_not":false,"summary":null,"term":"GO:0120115"},{"annotations":[112622],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[112624],"is_not":false,"summary":null,"term":"GO:0000932"},{"annotations":[112625],"is_not":false,"summary":null,"term":"GO:0071011"},{"annotations":[112626],"is_not":false,"summary":null,"term":"GO:0005697"},{"annotations":[112627],"is_not":false,"summary":null,"term":"GO:0005686"},{"annotations":[61883],"is_not":false,"summary":null,"term":"GO:0046540"},{"annotations":[112629],"is_not":false,"summary":null,"term":"GO:0005682"},{"annotations":[61882],"is_not":false,"summary":null,"term":"GO:0005688"}],"molecular_function":[{"annotations":[112633],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[112634],"is_not":false,"summary":null,"term":"GO:0008266"},{"annotations":[112635],"is_not":false,"summary":null,"term":"GO:0140691"},{"annotations":[112636],"is_not":false,"summary":null,"term":"GO:0070034"},{"annotations":[112637],"is_not":false,"summary":null,"term":"GO:0030620"}]},"dbxrefs":["InterPro:IPR010920","InterPro:IPR034105","InterPro:IPR040002","GOA:B6K4A7","EnsemblGenomes-Tr:EEB08314","InterPro:IPR001163","EnsemblGenomes-Gn:SJAG_03460","UniProtKB/TrEMBL:B6K4A7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gmf1","uniquename":"SJAG_03455"},{"name":"cyc2","uniquename":"SJAG_03456"},{"name":"pro2","uniquename":"SJAG_03457"},{"name":"nop52","uniquename":"SJAG_03458"},{"name":"mrpl10","uniquename":"SJAG_03459"},{"name":"lsm3","uniquename":"SJAG_03460"},{"name":"tuf1","uniquename":"SJAG_03461"},{"name":"pfd1","uniquename":"SJAG_03463"},{"name":"fis1","uniquename":"SJAG_03464"},{"name":"end3","uniquename":"SJAG_03465"},{"name":"mrt4","uniquename":"SJAG_03466"}],"genes_by_uniquename":{"HGNC:17874":null,"SJAG_03460":null,"SPBC9B6.05c":null,"YLR438C-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"LSM domain","id":"PF01423","interpro_description":"Sm domain, eukaryotic/archaea-type","interpro_id":"IPR001163","interpro_name":"Sm_dom_euk/arc","locations":[{"end":85,"start":14}],"match_end":85,"match_start":14,"name":"LSM"},{"dbname":"CDD","description":"LSm3","id":"cd01730","interpro_description":"Sm-like protein Lsm3","interpro_id":"IPR034105","interpro_name":"Lsm3","locations":[{"end":85,"start":9}],"match_end":85,"match_start":9,"name":"LSm3"},{"dbname":"SMART","id":"SM00651","interpro_description":"Sm domain, eukaryotic/archaea-type","interpro_id":"IPR001163","interpro_name":"Sm_dom_euk/arc","locations":[{"end":85,"start":12}],"match_end":85,"match_start":12,"name":"Sm3"},{"dbname":"SUPERFAMILY","id":"SSF50182","interpro_description":"LSM domain superfamily","interpro_id":"IPR010920","interpro_name":"LSM_dom_sf","locations":[{"end":87,"start":9}],"match_end":87,"match_start":9,"name":"Sm-like ribonucleoproteins"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.100","locations":[{"end":87,"start":1}],"match_end":87,"match_start":1},{"dbname":"PANTHER","id":"PTHR13110","interpro_description":"U6 snRNA-associated Sm-like protein Lsm3","interpro_id":"IPR040002","interpro_name":"Sm-like_LSM3","locations":[{"end":87,"start":2}],"match_end":87,"match_start":2,"name":"U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3"}],"location":{"chromosome_name":"supercont5.2","end_pos":1135775,"start_pos":1135208,"strand":"forward"},"name":"lsm3","ortholog_annotations":[{"gene_uniquename":"SJAG_03460","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17874","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03460","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC9B6.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03460","ortholog_taxonid":4932,"ortholog_uniquename":"YLR438C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03460","ortholog_taxonid":4932,"ortholog_uniquename":"YLR438C-A","reference_uniquename":"PMID:26896847"}],"product":"Lsm2-8 complex subunit Lsm3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030620","GO:0070034","GO:0003682","GO:0008266"],"not-binding":["GO:0140691"]}},"subset_termids":["GO:0016071","GO:0005694","GO:0000932","GO:0005730","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000932":null,"GO:0003682":null,"GO:0005682":null,"GO:0005686":null,"GO:0005688":null,"GO:0005697":null,"GO:0005730":null,"GO:0008266":null,"GO:0030620":null,"GO:0033962":null,"GO:0045292":null,"GO:0046540":null,"GO:0070034":null,"GO:0071011":null,"GO:0071013":null,"GO:0120115":null,"GO:0140445":null,"GO:0140691":null,"GO:1990726":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03460.1"],"transcripts_by_uniquename":{"SJAG_03460.1":null},"uniprot_identifier":"B6K4A7","uniquename":"SJAG_03460"}


id: SJAG_03461
data:
  {"cv_annotations":{"biological_process":[{"annotations":[73344],"is_not":false,"summary":null,"term":"GO:0070125"}],"cellular_component":[{"annotations":[112610],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[61294],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[61296],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[73343],"is_not":false,"summary":null,"term":"GO:0003746"},{"annotations":[112617],"is_not":false,"summary":null,"term":"GO:0000049"}],"mondo":[{"annotations":[85633],"is_not":false,"summary":null,"term":"MONDO:0012534"}]},"dbxrefs":["InterPro:IPR004160","InterPro:IPR005225","InterPro:IPR041709","InterPro:IPR000795","InterPro:IPR033720","InterPro:IPR009001","GOA:B6K4A8","InterPro:IPR031157","InterPro:IPR027417","UniProtKB/TrEMBL:B6K4A8","InterPro:IPR009000","InterPro:IPR004161","InterPro:IPR004541","EnsemblGenomes-Tr:EEB08315","EnsemblGenomes-Gn:SJAG_03461"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cyc2","uniquename":"SJAG_03456"},{"name":"pro2","uniquename":"SJAG_03457"},{"name":"nop52","uniquename":"SJAG_03458"},{"name":"mrpl10","uniquename":"SJAG_03459"},{"name":"lsm3","uniquename":"SJAG_03460"},{"name":"tuf1","uniquename":"SJAG_03461"},{"name":"pfd1","uniquename":"SJAG_03463"},{"name":"fis1","uniquename":"SJAG_03464"},{"name":"end3","uniquename":"SJAG_03465"},{"name":"mrt4","uniquename":"SJAG_03466"},{"name":"trs20","uniquename":"SJAG_03467"}],"genes_by_uniquename":{"HGNC:12420":null,"SJAG_03461":null,"SPBC9B6.04c":null,"YOR187W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Elongation factor Tu domain 2","id":"PF03144","interpro_description":"Translation elongation factor EFTu-like, domain 2","interpro_id":"IPR004161","interpro_name":"EFTu-like_2","locations":[{"end":337,"start":269}],"match_end":337,"match_start":269,"name":"GTP_EFTU_D2"},{"dbname":"PFAM","description":"Elongation factor Tu C-terminal domain","id":"PF03143","interpro_description":"Translation elongation factor EFTu/EF1A, C-terminal","interpro_id":"IPR004160","interpro_name":"Transl_elong_EFTu/EF1A_C","locations":[{"end":439,"start":342}],"match_end":439,"match_start":342,"name":"GTP_EFTU_D3"},{"dbname":"PFAM","description":"Elongation factor Tu GTP binding domain","id":"PF00009","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":245,"start":53}],"match_end":245,"match_start":53,"name":"GTP_EFTU"},{"dbname":"CDD","description":"EF_Tu","id":"cd01884","interpro_description":"Elongation factor Tu (EF-Tu), GTP-binding domain","interpro_id":"IPR041709","interpro_name":"EF-Tu_GTP-bd","locations":[{"end":247,"start":54}],"match_end":247,"match_start":54,"name":"EF_Tu"},{"dbname":"CDD","description":"EFTU_II","id":"cd03697","interpro_description":"Elongation factor Tu, domain 2","interpro_id":"IPR033720","interpro_name":"EFTU_2","locations":[{"end":341,"start":255}],"match_end":341,"match_start":255,"name":"EFTU_II"},{"dbname":"CDD","description":"EFTU_III","id":"cd03707","locations":[{"end":436,"start":344}],"match_end":436,"match_start":344,"name":"EFTU_III"},{"dbname":"PROSITE_PATTERNS","description":"Translational (tr)-type guanine nucleotide-binding (G) domain signature.","id":"PS00301","interpro_description":"Tr-type G domain, conserved site","interpro_id":"IPR031157","interpro_name":"G_TR_CS","locations":[{"end":109,"start":94}],"match_end":109,"match_start":94,"name":"G_TR_1"},{"dbname":"PROSITE_PROFILES","description":"Translational (tr)-type guanine nucleotide-binding (G) domain profile.","id":"PS51722","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":248,"start":53}],"match_end":248,"match_start":53,"name":"G_TR_2"},{"dbname":"PRINTS","description":"GTP-binding elongation factor signature","id":"PR00315","interpro_description":"Translational (tr)-type GTP-binding domain","interpro_id":"IPR000795","interpro_name":"T_Tr_GTP-bd_dom","locations":[{"end":70,"start":57},{"end":109,"start":101},{"end":131,"start":121},{"end":148,"start":137},{"end":183,"start":174}],"match_end":183,"match_start":57,"name":"ELONGATNFCT"},{"dbname":"FUNFAM","description":"Elongation factor Tu","id":"G3DSA:3.40.50.300:FF:000003","locations":[{"end":247,"start":44}],"match_end":247,"match_start":44},{"dbname":"FUNFAM","description":"Elongation factor Tu","id":"G3DSA:2.40.30.10:FF:000001","locations":[{"end":378,"start":250}],"match_end":378,"match_start":250},{"dbname":"SUPERFAMILY","id":"SSF50465","interpro_description":"Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal","interpro_id":"IPR009001","interpro_name":"Transl_elong_EF1A/Init_IF2_C","locations":[{"end":441,"start":346}],"match_end":441,"match_start":346,"name":"EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":270,"start":52}],"match_end":270,"match_start":52,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"SUPERFAMILY","id":"SSF50447","interpro_description":"Translation protein, beta-barrel domain superfamily","interpro_id":"IPR009000","interpro_name":"Transl_B-barrel_sf","locations":[{"end":343,"start":249}],"match_end":343,"match_start":249,"name":"Translation proteins"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":247,"start":44}],"match_end":247,"match_start":44},{"dbname":"GENE3D","id":"G3DSA:2.40.30.10","locations":[{"end":378,"start":250},{"end":440,"start":382}],"match_end":440,"match_start":250,"name":"Translation factors"},{"dbname":"PANTHER","id":"PTHR43721","interpro_description":"Elongation factor Tu GTPase","interpro_id":"IPR050055","interpro_name":"EF-Tu_GTPase","locations":[{"end":441,"start":46}],"match_end":441,"match_start":46,"name":"ELONGATION FACTOR TU-RELATED"},{"dbname":"HAMAP","description":"Elongation factor Tu [tuf].","id":"MF_00118_B","interpro_description":"Translation elongation factor EFTu/EF1A, bacterial/organelle","interpro_id":"IPR004541","interpro_name":"Transl_elong_EFTu/EF1A_bac/org","locations":[{"end":441,"start":44}],"match_end":441,"match_start":44,"name":"EF_Tu_B"},{"dbname":"NCBIFAM","description":"elongation factor Tu","id":"TIGR00485","interpro_description":"Translation elongation factor EFTu/EF1A, bacterial/organelle","interpro_id":"IPR004541","interpro_name":"Transl_elong_EFTu/EF1A_bac/org","locations":[{"end":441,"start":44}],"match_end":441,"match_start":44,"name":"EF-Tu"},{"dbname":"NCBIFAM","description":"small GTP-binding protein domain","id":"TIGR00231","interpro_description":"Small GTP-binding domain","interpro_id":"IPR005225","interpro_name":"Small_GTP-bd","locations":[{"end":190,"start":56}],"match_end":190,"match_start":56,"name":"small_GTP"}],"location":{"chromosome_name":"supercont5.2","end_pos":1137906,"start_pos":1136461,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":81,"start":67}},{"range":{"end":195,"start":180}}],"name":"tuf1","ortholog_annotations":[{"gene_uniquename":"SJAG_03461","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12420","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03461","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC9B6.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03461","ortholog_taxonid":4932,"ortholog_uniquename":"YOR187W","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial translation elongation factor EF-Tu Tuf1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000049","GO:0005525"],"not-binding":["GO:0003924","GO:0003746"]}},"subset_termids":["GO:0005739","MONDO:0005066","GO:0140053","GO:0003924","MONDO:0004069"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000049":null,"GO:0003746":null,"GO:0003924":null,"GO:0005525":null,"GO:0005759":null,"GO:0070125":null,"MONDO:0012534":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03461.1"],"transcripts_by_uniquename":{"SJAG_03461.1":null},"uniprot_identifier":"B6K4A8","uniquename":"SJAG_03461"}


id: SJAG_03463
data:
  {"coiled_coil_coords":[{"range":{"end":99,"start":79}}],"cv_annotations":{"biological_process":[{"annotations":[58344],"is_not":false,"summary":null,"term":"GO:0006457"},{"annotations":[106005],"is_not":false,"summary":null,"term":"GO:0007021"}],"cellular_component":[{"annotations":[106001],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106002],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[58345],"is_not":false,"summary":null,"term":"GO:0016272"}],"molecular_function":[{"annotations":[106006],"is_not":false,"summary":null,"term":"GO:0044183"},{"annotations":[58346],"is_not":false,"summary":null,"term":"GO:0051082"}]},"dbxrefs":["GOA:B6K4A9","InterPro:IPR002777","InterPro:IPR009053","UniProtKB/TrEMBL:B6K4A9","EnsemblGenomes-Tr:EEB08316","EnsemblGenomes-Gn:SJAG_03463"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pro2","uniquename":"SJAG_03457"},{"name":"nop52","uniquename":"SJAG_03458"},{"name":"mrpl10","uniquename":"SJAG_03459"},{"name":"lsm3","uniquename":"SJAG_03460"},{"name":"tuf1","uniquename":"SJAG_03461"},{"name":"pfd1","uniquename":"SJAG_03463"},{"name":"fis1","uniquename":"SJAG_03464"},{"name":"end3","uniquename":"SJAG_03465"},{"name":"mrt4","uniquename":"SJAG_03466"},{"name":"trs20","uniquename":"SJAG_03467"},{"name":"rpa34","uniquename":"SJAG_03468"}],"genes_by_uniquename":{"HGNC:8866":null,"SJAG_03463":null,"SPBC1D7.01":null,"YJL179W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Prefoldin subunit","id":"PF01920","interpro_description":"Prefoldin beta-like","interpro_id":"IPR002777","interpro_name":"PFD_beta-like","locations":[{"end":105,"start":7}],"match_end":105,"match_start":7,"name":"Prefoldin_2"},{"dbname":"SUPERFAMILY","id":"SSF46579","locations":[{"end":104,"start":5}],"match_end":104,"match_start":5,"name":"Prefoldin"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.370","interpro_description":"Prefoldin","interpro_id":"IPR009053","interpro_name":"Prefoldin","locations":[{"end":110,"start":1}],"match_end":110,"match_start":1},{"dbname":"PANTHER","id":"PTHR20903","locations":[{"end":108,"start":4}],"match_end":108,"match_start":4,"name":"PREFOLDIN SUBUNIT 1-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":99,"start":79}],"match_end":99,"match_start":79,"name":"Coil"}],"location":{"chromosome_name":"supercont5.2","end_pos":1139490,"start_pos":1139040,"strand":"reverse"},"name":"pfd1","ortholog_annotations":[{"gene_uniquename":"SJAG_03463","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8866","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03463","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1D7.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03463","ortholog_taxonid":4932,"ortholog_uniquename":"YJL179W","reference_uniquename":"PMID:29761456"}],"product":"prefoldin subunit Pfd1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051082"],"not-binding":["GO:0044183"]}},"subset_termids":["GO:0051082","GO:0005829","GO:0051604","GO:0006457","GO:0065003","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0006457":null,"GO:0007021":null,"GO:0016272":null,"GO:0044183":null,"GO:0051082":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03463.1"],"transcripts_by_uniquename":{"SJAG_03463.1":null},"uniprot_identifier":"B6K4A9","uniquename":"SJAG_03463"}


id: SJAG_03464
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102257],"is_not":false,"summary":null,"term":"GO:0090149"},{"annotations":[78229],"is_not":false,"summary":null,"term":"GO:0016559"}],"cellular_component":[{"annotations":[102255],"is_not":false,"summary":null,"term":"GO:0032473"},{"annotations":[78231],"is_not":false,"summary":null,"term":"GO:0005778"}],"molecular_function":[{"annotations":[78232],"is_not":false,"summary":null,"term":"GO:0008289"},{"annotations":[102260],"is_not":false,"summary":null,"term":"GO:0043495"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K4B0","GOA:B6K4B0","InterPro:IPR028058","InterPro:IPR016543","InterPro:IPR011990","EnsemblGenomes-Gn:SJAG_03464","InterPro:IPR028061","InterPro:IPR033745","EnsemblGenomes-Tr:EEB08317"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nop52","uniquename":"SJAG_03458"},{"name":"mrpl10","uniquename":"SJAG_03459"},{"name":"lsm3","uniquename":"SJAG_03460"},{"name":"tuf1","uniquename":"SJAG_03461"},{"name":"pfd1","uniquename":"SJAG_03463"},{"name":"fis1","uniquename":"SJAG_03464"},{"name":"end3","uniquename":"SJAG_03465"},{"name":"mrt4","uniquename":"SJAG_03466"},{"name":"trs20","uniquename":"SJAG_03467"},{"name":"rpa34","uniquename":"SJAG_03468"},{"name":"sme1","uniquename":"SJAG_03469"}],"genes_by_uniquename":{"HGNC:21689":null,"SJAG_03464":null,"SPBC11G11.01":null,"YIL065C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Fis1 N-terminal tetratricopeptide repeat","id":"PF14852","interpro_description":"Fis1, N-terminal tetratricopeptide repeat","interpro_id":"IPR028058","interpro_name":"Fis1_TPR_N","locations":[{"end":73,"start":42}],"match_end":73,"match_start":42,"name":"Fis1_TPR_N"},{"dbname":"PFAM","description":"Fis1 C-terminal tetratricopeptide repeat","id":"PF14853","interpro_description":"Fis1, C-terminal tetratricopeptide repeat","interpro_id":"IPR028061","interpro_name":"Fis1_TPR_C","locations":[{"end":129,"start":80}],"match_end":129,"match_start":80,"name":"Fis1_TPR_C"},{"dbname":"CDD","description":"Fis1","id":"cd12212","interpro_description":"Mitochondria fission protein Fis1, cytosolic domain","interpro_id":"IPR033745","interpro_name":"Fis1_cytosol","locations":[{"end":128,"start":20}],"match_end":128,"match_start":20,"name":"Fis1"},{"dbname":"SUPERFAMILY","id":"SSF48452","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":165,"start":19}],"match_end":165,"match_start":19,"name":"TPR-like"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":170,"start":15}],"match_end":170,"match_start":15,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR13247","interpro_description":"Mitochondria fission 1 protein","interpro_id":"IPR016543","interpro_name":"Fis1","locations":[{"end":161,"start":27}],"match_end":161,"match_start":27,"name":"TETRATRICOPEPTIDE REPEAT PROTEIN 11  TPR REPEAT PROTEIN 11"},{"dbname":"PIRSF","id":"PIRSF008835","interpro_description":"Mitochondria fission 1 protein","interpro_id":"IPR016543","interpro_name":"Fis1","locations":[{"end":170,"start":8}],"match_end":170,"match_start":8,"name":"TPR_repeat_11_Fis1"}],"location":{"chromosome_name":"supercont5.2","end_pos":1140585,"start_pos":1140007,"strand":"forward"},"name":"fis1","ortholog_annotations":[{"gene_uniquename":"SJAG_03464","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21689","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03464","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC11G11.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03464","ortholog_taxonid":4932,"ortholog_uniquename":"YIL065C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03464","ortholog_taxonid":4932,"ortholog_uniquename":"YIL065C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial outer membrane fission complex receptor Fis1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008289"],"not-binding":["GO:0043495"]}},"subset_termids":["GO:0007005","GO:0008289","GO:0061024","GO:0005777","GO:0060090","GO:0005739","GO:0007031"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005778":null,"GO:0008289":null,"GO:0016559":null,"GO:0032473":null,"GO:0043495":null,"GO:0090149":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":165,"start":143}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03464.1"],"transcripts_by_uniquename":{"SJAG_03464.1":null},"uniprot_identifier":"B6K4B0","uniquename":"SJAG_03464"}


id: SJAG_03465
data:
  {"coiled_coil_coords":[{"range":{"end":316,"start":275}}],"cv_annotations":{"biological_process":[{"annotations":[102264],"is_not":false,"summary":null,"term":"GO:0030036"},{"annotations":[102265],"is_not":false,"summary":null,"term":"GO:0006897"},{"annotations":[102266],"is_not":false,"summary":null,"term":"GO:0016197"}],"cellular_component":[{"annotations":[67864],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[67862],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[102263],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[67863],"is_not":false,"summary":null,"term":"GO:0003779"},{"annotations":[67861],"is_not":false,"summary":null,"term":"GO:0005509"}]},"dbxrefs":["GOA:B6K4B1","InterPro:IPR025604","UniProtKB/TrEMBL:B6K4B1","InterPro:IPR000261","InterPro:IPR011992","InterPro:IPR018247","EnsemblGenomes-Gn:SJAG_03465","InterPro:IPR002048","EnsemblGenomes-Tr:EEB08318"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":267,"start":236}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrpl10","uniquename":"SJAG_03459"},{"name":"lsm3","uniquename":"SJAG_03460"},{"name":"tuf1","uniquename":"SJAG_03461"},{"name":"pfd1","uniquename":"SJAG_03463"},{"name":"fis1","uniquename":"SJAG_03464"},{"name":"end3","uniquename":"SJAG_03465"},{"name":"mrt4","uniquename":"SJAG_03466"},{"name":"trs20","uniquename":"SJAG_03467"},{"name":"rpa34","uniquename":"SJAG_03468"},{"name":"sme1","uniquename":"SJAG_03469"},{"name":"mtr10","uniquename":"SJAG_03470"}],"genes_by_uniquename":{"HGNC:24634":null,"HGNC:3419":null,"SJAG_03465":null,"SPBC11G11.02c":null,"YNL084C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cytoskeletal-regulatory complex EF hand","id":"PF12763","interpro_description":"EH domain","interpro_id":"IPR000261","interpro_name":"EH_dom","locations":[{"end":100,"start":3}],"match_end":100,"match_start":3,"name":"EF-hand_4"},{"dbname":"CDD","description":"EH","id":"cd00052","interpro_description":"EH domain","interpro_id":"IPR000261","interpro_name":"EH_dom","locations":[{"end":74,"start":9}],"match_end":74,"match_start":9,"name":"EH"},{"dbname":"PROSITE_PATTERNS","description":"EF-hand calcium-binding domain.","id":"PS00018","interpro_description":"EF-Hand 1, calcium-binding site","interpro_id":"IPR018247","interpro_name":"EF_Hand_1_Ca_BS","locations":[{"end":62,"start":50}],"match_end":62,"match_start":50,"name":"EF_HAND_1"},{"dbname":"PROSITE_PROFILES","description":"EF-hand calcium-binding domain profile.","id":"PS50222","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":72,"start":37}],"match_end":72,"match_start":37,"name":"EF_HAND_2"},{"dbname":"PROSITE_PROFILES","description":"EH domain profile.","id":"PS50031","interpro_description":"EH domain","interpro_id":"IPR000261","interpro_name":"EH_dom","locations":[{"end":95,"start":5},{"end":228,"start":140}],"match_end":228,"match_start":5,"name":"EH"},{"dbname":"SMART","id":"SM00027","interpro_description":"EH domain","interpro_id":"IPR000261","interpro_name":"EH_dom","locations":[{"end":94,"start":1},{"end":227,"start":133}],"match_end":227,"match_start":1,"name":"eh_3"},{"dbname":"SMART","id":"SM00054","interpro_description":"EF-hand domain","interpro_id":"IPR002048","interpro_name":"EF_hand_dom","locations":[{"end":69,"start":41}],"match_end":69,"match_start":41,"name":"efh_1"},{"dbname":"SUPERFAMILY","id":"SSF47473","interpro_description":"EF-hand domain pair","interpro_id":"IPR011992","interpro_name":"EF-hand-dom_pair","locations":[{"end":94,"start":2},{"end":225,"start":126}],"match_end":225,"match_start":2,"name":"EF-hand"},{"dbname":"GENE3D","id":"G3DSA:1.10.238.10","locations":[{"end":99,"start":1},{"end":226,"start":119}],"match_end":226,"match_start":1},{"dbname":"PANTHER","id":"PTHR11216","locations":[{"end":325,"start":2}],"match_end":325,"match_start":2,"name":"EH DOMAIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":316,"start":275}],"match_end":316,"match_start":275,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":267,"start":236}],"match_end":267,"match_start":236,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":252,"start":239}],"match_end":252,"match_start":239,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1141917,"start_pos":1140658,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":59,"start":46}},{"range":{"end":125,"start":117}}],"name":"end3","ortholog_annotations":[{"gene_uniquename":"SJAG_03465","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24634","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03465","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3419","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03465","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC11G11.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03465","ortholog_taxonid":4932,"ortholog_uniquename":"YNL084C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03465","ortholog_taxonid":4932,"ortholog_uniquename":"YNL084C","reference_uniquename":"PMID:26896847"}],"product":"actin cortical patch component End3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000043":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005509","GO:0003779"]}},"subset_termids":["GO:0005768","GO:0030036","GO:0030479","GO:0015629","GO:0005938","GO:0031410","GO:0005886","GO:0016192","GO:0003779"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003779":null,"GO:0005509":null,"GO:0005768":null,"GO:0005886":null,"GO:0006897":null,"GO:0016197":null,"GO:0030036":null,"GO:0030479":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03465.1"],"transcripts_by_uniquename":{"SJAG_03465.1":null},"uniprot_identifier":"B6K4B1","uniquename":"SJAG_03465"}


id: SJAG_03466
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102272],"is_not":false,"summary":null,"term":"GO:1902626"},{"annotations":[102273],"is_not":false,"summary":null,"term":"GO:0180023"},{"annotations":[79652],"is_not":false,"summary":null,"term":"GO:0000956"},{"annotations":[79653],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[79649],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[79651],"is_not":false,"summary":null,"term":"GO:0030687"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03466","InterPro:IPR033867","InterPro:IPR040637","EnsemblGenomes-Tr:EEB08319","UniProtKB/TrEMBL:B6K4B2","GOA:B6K4B2","InterPro:IPR001790"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lsm3","uniquename":"SJAG_03460"},{"name":"tuf1","uniquename":"SJAG_03461"},{"name":"pfd1","uniquename":"SJAG_03463"},{"name":"fis1","uniquename":"SJAG_03464"},{"name":"end3","uniquename":"SJAG_03465"},{"name":"mrt4","uniquename":"SJAG_03466"},{"name":"trs20","uniquename":"SJAG_03467"},{"name":"rpa34","uniquename":"SJAG_03468"},{"name":"sme1","uniquename":"SJAG_03469"},{"name":"mtr10","uniquename":"SJAG_03470"},{"name":"lcf1","uniquename":"SJAG_03471"}],"genes_by_uniquename":{"HGNC:18477":null,"SJAG_03466":null,"SPBC11G11.03":null,"YKL009W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein L10","id":"PF00466","interpro_description":"Large ribosomal subunit protein uL10","interpro_id":"IPR001790","interpro_name":"Ribosomal_uL10","locations":[{"end":119,"start":19}],"match_end":119,"match_start":19,"name":"Ribosomal_L10"},{"dbname":"PFAM","description":"Insertion domain in 60S ribosomal protein L10P","id":"PF17777","interpro_description":"Large ribosomal subunit protein uL10-like, insertion domain","interpro_id":"IPR040637","interpro_name":"Ribosomal_uL10-like_insert","locations":[{"end":207,"start":125}],"match_end":207,"match_start":125,"name":"RL10P_insert"},{"dbname":"CDD","description":"Ribosomal_P0_like","id":"cd05796","interpro_description":"Ribosome assembly factor Mrt4","interpro_id":"IPR033867","interpro_name":"Mrt4","locations":[{"end":195,"start":23}],"match_end":195,"match_start":23,"name":"Ribosomal_P0_like"},{"dbname":"FUNFAM","description":"Ribosome assembly factor mrt4","id":"G3DSA:3.90.105.20:FF:000003","locations":[{"end":209,"start":124}],"match_end":209,"match_start":124},{"dbname":"FUNFAM","description":"Ribosome assembly factor mrt4","id":"G3DSA:3.30.70.1730:FF:000005","locations":[{"end":130,"start":29}],"match_end":130,"match_start":29},{"dbname":"SUPERFAMILY","id":"SSF160369","interpro_description":"Large ribosomal subunit protein uL10-like domain superfamily","interpro_id":"IPR043141","interpro_name":"Ribosomal_uL10-like_sf","locations":[{"end":141,"start":20}],"match_end":141,"match_start":20,"name":"Ribosomal protein L10-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.1730","interpro_description":"Large ribosomal subunit protein uL10-like domain superfamily","interpro_id":"IPR043141","interpro_name":"Ribosomal_uL10-like_sf","locations":[{"end":123,"start":30},{"end":224,"start":210}],"match_end":224,"match_start":30},{"dbname":"GENE3D","id":"G3DSA:3.90.105.20","interpro_description":"Large ribosomal subunit protein uL10-like, insertion domain superfamily","interpro_id":"IPR043164","interpro_name":"Ribosomal_uL10-like_insert_sf","locations":[{"end":209,"start":124}],"match_end":209,"match_start":124},{"dbname":"PANTHER","id":"PTHR45841","interpro_description":"Ribosomal Assembly Factor uL10","interpro_id":"IPR051742","interpro_name":"Ribosome_Assembly_uL10","locations":[{"end":228,"start":1}],"match_end":228,"match_start":1,"name":"MRNA TURNOVER PROTEIN 4 MRTO4"}],"location":{"chromosome_name":"supercont5.2","end_pos":1143171,"start_pos":1142226,"strand":"forward"},"name":"mrt4","ortholog_annotations":[{"gene_uniquename":"SJAG_03466","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18477","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03466","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC11G11.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03466","ortholog_taxonid":4932,"ortholog_uniquename":"YKL009W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03466","ortholog_taxonid":4932,"ortholog_uniquename":"YKL009W","reference_uniquename":"PMID:26896847"}],"product":"mRNA turnover and ribosome assembly protein Mrt4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0016071","GO:0042254","GO:0065003","GO:0030684","GO:0005730","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000956":null,"GO:0005730":null,"GO:0006364":null,"GO:0030687":null,"GO:0180023":null,"GO:1902626":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03466.1"],"transcripts_by_uniquename":{"SJAG_03466.1":null},"uniprot_identifier":"B6K4B2","uniquename":"SJAG_03466"}


id: SJAG_03467
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78556],"is_not":false,"summary":null,"term":"GO:0006888"},{"annotations":[102282],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[102283],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[102284],"is_not":false,"summary":null,"term":"GO:0016236"}],"cellular_component":[{"annotations":[102276],"is_not":false,"summary":null,"term":"GO:0005801"},{"annotations":[78554],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[102278],"is_not":false,"summary":null,"term":"GO:1990070"},{"annotations":[102279],"is_not":false,"summary":null,"term":"GO:1990071"},{"annotations":[102280],"is_not":false,"summary":null,"term":"GO:1990072"}],"mondo":[{"annotations":[86192],"is_not":false,"summary":null,"term":"MONDO:0010737"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08320","InterPro:IPR011012","EnsemblGenomes-Gn:SJAG_03467","GOA:B6K4B3","UniProtKB/TrEMBL:B6K4B3","InterPro:IPR006722"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tuf1","uniquename":"SJAG_03461"},{"name":"pfd1","uniquename":"SJAG_03463"},{"name":"fis1","uniquename":"SJAG_03464"},{"name":"end3","uniquename":"SJAG_03465"},{"name":"mrt4","uniquename":"SJAG_03466"},{"name":"trs20","uniquename":"SJAG_03467"},{"name":"rpa34","uniquename":"SJAG_03468"},{"name":"sme1","uniquename":"SJAG_03469"},{"name":"mtr10","uniquename":"SJAG_03470"},{"name":"lcf1","uniquename":"SJAG_03471"},{"name":"tif307","uniquename":"SJAG_03472"}],"genes_by_uniquename":{"HGNC:10710":null,"HGNC:23068":null,"SJAG_03467":null,"SPBC11G11.04":null,"YBR254C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sedlin, N-terminal conserved region","id":"PF04628","interpro_description":"Trafficking protein particle complex subunit 2","interpro_id":"IPR006722","interpro_name":"Sedlin","locations":[{"end":134,"start":7}],"match_end":134,"match_start":7,"name":"Sedlin_N"},{"dbname":"CDD","description":"TRAPPC2_sedlin","id":"cd14825","locations":[{"end":136,"start":4}],"match_end":136,"match_start":4,"name":"TRAPPC2_sedlin"},{"dbname":"SUPERFAMILY","id":"SSF64356","interpro_description":"Longin-like domain superfamily","interpro_id":"IPR011012","interpro_name":"Longin-like_dom_sf","locations":[{"end":135,"start":4}],"match_end":135,"match_start":4,"name":"SNARE-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.450.70","locations":[{"end":136,"start":1}],"match_end":136,"match_start":1},{"dbname":"PANTHER","id":"PTHR12403","interpro_description":"Trafficking protein particle complex subunit 2","interpro_id":"IPR006722","interpro_name":"Sedlin","locations":[{"end":135,"start":1}],"match_end":135,"match_start":1,"name":"TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2"}],"location":{"chromosome_name":"supercont5.2","end_pos":1144079,"start_pos":1143602,"strand":"forward"},"name":"trs20","ortholog_annotations":[{"gene_uniquename":"SJAG_03467","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10710","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03467","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23068","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03467","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC11G11.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03467","ortholog_taxonid":4932,"ortholog_uniquename":"YBR254C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03467","ortholog_taxonid":4932,"ortholog_uniquename":"YBR254C","reference_uniquename":"PMID:26896847"}],"product":"TRAPP I,II and III complex subunit Trs20","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005768","GO:0005634","GO:0016192","GO:0005794","MONDO:0005497","GO:0006914","GO:0031410"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005801":null,"GO:0006886":null,"GO:0006888":null,"GO:0006891":null,"GO:0016236":null,"GO:1990070":null,"GO:1990071":null,"GO:1990072":null,"MONDO:0010737":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03467.1"],"transcripts_by_uniquename":{"SJAG_03467.1":null},"uniprot_identifier":"B6K4B3","uniquename":"SJAG_03467"}


id: SJAG_03468
data:
  {"cv_annotations":{"biological_process":[{"annotations":[63252],"is_not":false,"summary":null,"term":"GO:0006360"}],"cellular_component":[{"annotations":[102286],"is_not":false,"summary":null,"term":"GO:0005736"}],"molecular_function":[{"annotations":[102288],"is_not":false,"summary":null,"term":"GO:0003899"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08321","GOA:B6K4B4","InterPro:IPR013240","UniProtKB/TrEMBL:B6K4B4","EnsemblGenomes-Gn:SJAG_03468"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":49,"start":1}},{"range":{"end":249,"start":157}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pfd1","uniquename":"SJAG_03463"},{"name":"fis1","uniquename":"SJAG_03464"},{"name":"end3","uniquename":"SJAG_03465"},{"name":"mrt4","uniquename":"SJAG_03466"},{"name":"trs20","uniquename":"SJAG_03467"},{"name":"rpa34","uniquename":"SJAG_03468"},{"name":"sme1","uniquename":"SJAG_03469"},{"name":"mtr10","uniquename":"SJAG_03470"},{"name":"lcf1","uniquename":"SJAG_03471"},{"name":"tif307","uniquename":"SJAG_03472"},{"name":"scr1","uniquename":"SJAG_03473"}],"genes_by_uniquename":{"HGNC:24219":null,"SJAG_03468":null,"SPBC11G11.05":null,"YJL148W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DNA-directed RNA polymerase I subunit RPA34.5","id":"PF08208","interpro_description":"DNA-directed RNA polymerase I, subunit RPA34","interpro_id":"IPR013240","interpro_name":"DNA-dir_RNA_pol1_su_RPA34","locations":[{"end":248,"start":83}],"match_end":248,"match_start":83,"name":"RNA_polI_A34"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":49,"start":1},{"end":249,"start":157}],"match_end":249,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":49,"start":27}],"match_end":49,"match_start":27,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":26,"start":12}],"match_end":26,"match_start":12,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":203,"start":187}],"match_end":203,"match_start":187,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":11,"start":1}],"match_end":11,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1145064,"start_pos":1144315,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":52,"start":10}},{"range":{"end":247,"start":219}}],"name":"rpa34","ortholog_annotations":[{"gene_uniquename":"SJAG_03468","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24219","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03468","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC11G11.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03468","ortholog_taxonid":4932,"ortholog_uniquename":"YJL148W","reference_uniquename":"PMID:29761456"}],"product":"DNA-directed RNA polymerase I complex subunit Rpa34","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003899"]}},"subset_termids":["GO:0140098","GO:0006351","GO:0005634","GO:0016779","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003899":null,"GO:0005736":null,"GO:0006360":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03468.1"],"transcripts_by_uniquename":{"SJAG_03468.1":null},"uniprot_identifier":"B6K4B4","uniquename":"SJAG_03468"}


id: SJAG_03469
data:
  {"cv_annotations":{"biological_process":[{"annotations":[102300],"is_not":false,"summary":null,"term":"GO:0000395"},{"annotations":[72500],"is_not":false,"summary":null,"term":"GO:0000387"}],"cellular_component":[{"annotations":[102289],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72505],"is_not":false,"summary":null,"term":"GO:0034715"},{"annotations":[102292],"is_not":false,"summary":null,"term":"GO:0071014"},{"annotations":[72507],"is_not":false,"summary":null,"term":"GO:0071011"},{"annotations":[72502],"is_not":false,"summary":null,"term":"GO:0005685"},{"annotations":[72503],"is_not":false,"summary":null,"term":"GO:0005686"},{"annotations":[102296],"is_not":false,"summary":null,"term":"GO:0071004"},{"annotations":[72504],"is_not":false,"summary":null,"term":"GO:0005687"},{"annotations":[72506],"is_not":false,"summary":null,"term":"GO:0046540"},{"annotations":[72501],"is_not":false,"summary":null,"term":"GO:0005682"}],"molecular_function":[{"annotations":[60285],"is_not":false,"summary":null,"term":"GO:0003723"}],"mondo":[{"annotations":[85065],"is_not":false,"summary":null,"term":"MONDO:0014027"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03469","InterPro:IPR010920","GOA:B6K4B5","EnsemblGenomes-Tr:EEB08322","InterPro:IPR027078","UniProtKB/TrEMBL:B6K4B5","InterPro:IPR001163"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fis1","uniquename":"SJAG_03464"},{"name":"end3","uniquename":"SJAG_03465"},{"name":"mrt4","uniquename":"SJAG_03466"},{"name":"trs20","uniquename":"SJAG_03467"},{"name":"rpa34","uniquename":"SJAG_03468"},{"name":"sme1","uniquename":"SJAG_03469"},{"name":"mtr10","uniquename":"SJAG_03470"},{"name":"lcf1","uniquename":"SJAG_03471"},{"name":"tif307","uniquename":"SJAG_03472"},{"name":"scr1","uniquename":"SJAG_03473"},{"uniquename":"SJAG_06600"}],"genes_by_uniquename":{"HGNC:11161":null,"SJAG_03469":null,"SPBC11G11.06c":null,"YOR159C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"LSM domain","id":"PF01423","interpro_description":"Sm domain, eukaryotic/archaea-type","interpro_id":"IPR001163","interpro_name":"Sm_dom_euk/arc","locations":[{"end":82,"start":18}],"match_end":82,"match_start":18,"name":"LSM"},{"dbname":"CDD","description":"Sm_E","id":"cd01718","interpro_description":"Small nuclear ribonucleoprotein E","interpro_id":"IPR027078","interpro_name":"snRNP-E","locations":[{"end":83,"start":6}],"match_end":83,"match_start":6,"name":"Sm_E"},{"dbname":"PROSITE_PROFILES","description":"Sm domain profile.","id":"PS52002","interpro_description":"Sm domain","interpro_id":"IPR047575","interpro_name":"Sm","locations":[{"end":84,"start":13}],"match_end":84,"match_start":13,"name":"SM"},{"dbname":"SMART","id":"SM00651","interpro_description":"Sm domain, eukaryotic/archaea-type","interpro_id":"IPR001163","interpro_name":"Sm_dom_euk/arc","locations":[{"end":83,"start":18}],"match_end":83,"match_start":18,"name":"Sm3"},{"dbname":"SUPERFAMILY","id":"SSF50182","interpro_description":"LSM domain superfamily","interpro_id":"IPR010920","interpro_name":"LSM_dom_sf","locations":[{"end":82,"start":11}],"match_end":82,"match_start":11,"name":"Sm-like ribonucleoproteins"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.100","locations":[{"end":84,"start":1}],"match_end":84,"match_start":1},{"dbname":"PANTHER","id":"PTHR11193","interpro_description":"Small nuclear ribonucleoprotein E","interpro_id":"IPR027078","interpro_name":"snRNP-E","locations":[{"end":82,"start":4}],"match_end":82,"match_start":4,"name":"SMALL NUCLEAR RIBONUCLEOPROTEIN E"}],"location":{"chromosome_name":"supercont5.2","end_pos":1145637,"start_pos":1145112,"strand":"reverse"},"name":"sme1","ortholog_annotations":[{"gene_uniquename":"SJAG_03469","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11161","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03469","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC11G11.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03469","ortholog_taxonid":4932,"ortholog_uniquename":"YOR159C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03469","ortholog_taxonid":4932,"ortholog_uniquename":"YOR159C","reference_uniquename":"PMID:26896847"}],"product":"Sm snRNP core protein Sme1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0065003","GO:0005634","GO:0005829","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000387":null,"GO:0000395":null,"GO:0003723":null,"GO:0005682":null,"GO:0005685":null,"GO:0005686":null,"GO:0005687":null,"GO:0005829":null,"GO:0034715":null,"GO:0046540":null,"GO:0071004":null,"GO:0071011":null,"GO:0071014":null,"MONDO:0014027":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03469.1"],"transcripts_by_uniquename":{"SJAG_03469.1":null},"uniprot_identifier":"B6K4B5","uniquename":"SJAG_03469"}


id: SJAG_03470
data:
  {"cv_annotations":{"biological_process":[{"annotations":[71139],"is_not":false,"summary":null,"term":"GO:0006606"},{"annotations":[102308],"is_not":false,"summary":null,"term":"GO:0006404"}],"cellular_component":[{"annotations":[102304],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[102305],"is_not":false,"summary":null,"term":"GO:0005635"}],"molecular_function":[{"annotations":[102309],"is_not":false,"summary":null,"term":"GO:0061608"},{"annotations":[58803],"is_not":false,"summary":null,"term":"GO:0031267"}],"mondo":[{"annotations":[85562],"is_not":false,"summary":null,"term":"MONDO:0012034"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K4B6","InterPro:IPR001494","InterPro:IPR013598","InterPro:IPR016024","EnsemblGenomes-Tr:EEB08323","InterPro:IPR011989","EnsemblGenomes-Gn:SJAG_03470","GOA:B6K4B6"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"end3","uniquename":"SJAG_03465"},{"name":"mrt4","uniquename":"SJAG_03466"},{"name":"trs20","uniquename":"SJAG_03467"},{"name":"rpa34","uniquename":"SJAG_03468"},{"name":"sme1","uniquename":"SJAG_03469"},{"name":"mtr10","uniquename":"SJAG_03470"},{"name":"lcf1","uniquename":"SJAG_03471"},{"name":"tif307","uniquename":"SJAG_03472"},{"name":"scr1","uniquename":"SJAG_03473"},{"uniquename":"SJAG_06600"},{"name":"sua1","uniquename":"SJAG_03475"}],"genes_by_uniquename":{"HGNC:17103":null,"SJAG_03470":null,"SPBC11G11.07":null,"YOR160W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Importin-beta N-terminal domain","id":"PF03810","interpro_description":"Importin-beta, N-terminal domain","interpro_id":"IPR001494","interpro_name":"Importin-beta_N","locations":[{"end":89,"start":23}],"match_end":89,"match_start":23,"name":"IBN_N"},{"dbname":"PFAM","description":"Transportin-3/Importin-13 second TPR domain","id":"PF24138","locations":[{"end":369,"start":283}],"match_end":369,"match_start":283,"name":"TPR_TNPO3_IPO13_2nd"},{"dbname":"PFAM","description":"Transportin-3/Importin-13 fourth TPR domain","id":"PF24139","locations":[{"end":745,"start":644}],"match_end":745,"match_start":644,"name":"TPR_TNPO3_IPO13_4th"},{"dbname":"PFAM","description":"Exportin 1-like protein","id":"PF08389","interpro_description":"Exportin-1/Importin-beta-like","interpro_id":"IPR013598","interpro_name":"Exportin-1/Importin-b-like","locations":[{"end":241,"start":95}],"match_end":241,"match_start":95,"name":"Xpo1"},{"dbname":"PFAM","description":"Transportin-3/Importin-13 third TPR domain","id":"PF24140","locations":[{"end":553,"start":468}],"match_end":553,"match_start":468,"name":"TPR_TNPO3_IPO13_3rd"},{"dbname":"PROSITE_PROFILES","description":"Importin-beta N-terminal domain profile.","id":"PS50166","interpro_description":"Importin-beta, N-terminal domain","interpro_id":"IPR001494","interpro_name":"Importin-beta_N","locations":[{"end":90,"start":23}],"match_end":90,"match_start":23,"name":"IMPORTIN_B_NT"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":270,"start":1},{"end":812,"start":305}],"match_end":812,"match_start":1,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":941,"start":1}],"match_end":941,"match_start":1},{"dbname":"PANTHER","id":"PTHR12363","interpro_description":"Importin beta-like nuclear transport receptors","interpro_id":"IPR051345","interpro_name":"Importin_beta-like_NTR","locations":[{"end":942,"start":3}],"match_end":942,"match_start":3,"name":"TRANSPORTIN 3 AND IMPORTIN 13"}],"location":{"chromosome_name":"supercont5.2","end_pos":1149092,"start_pos":1146159,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":110,"start":97}},{"range":{"end":765,"start":752}}],"name":"mtr10","ortholog_annotations":[{"gene_uniquename":"SJAG_03470","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17103","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03470","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC11G11.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03470","ortholog_taxonid":4932,"ortholog_uniquename":"YOR160W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03470","ortholog_taxonid":4932,"ortholog_uniquename":"YOR160W","reference_uniquename":"PMID:26896847"}],"product":"karyopherin/importin-beta family nuclear import receptor Mtr10","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0031267"],"not-binding":["GO:0061608"]}},"subset_termids":["GO:0140104","GO:0006913","MONDO:0005336","MONDO:0000426","GO:0005829","GO:0005634","GO:0140142"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005635":null,"GO:0005829":null,"GO:0006404":null,"GO:0006606":null,"GO:0031267":null,"GO:0061608":null,"MONDO:0012034":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03470.1"],"transcripts_by_uniquename":{"SJAG_03470.1":null},"uniprot_identifier":"B6K4B6","uniquename":"SJAG_03470"}


id: SJAG_03471
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78742],"is_not":false,"summary":null,"term":"GO:0001676"},{"annotations":[78740],"is_not":false,"summary":null,"term":"GO:0035336"}],"cellular_component":[{"annotations":[78737],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[78738],"is_not":false,"summary":null,"term":"GO:0005811"},{"annotations":[78739],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[105357],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[105358],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[105359],"is_not":false,"summary":null,"term":"GO:0090432"},{"annotations":[105360],"is_not":false,"summary":null,"term":"GO:0090434"},{"annotations":[105361],"is_not":false,"summary":null,"term":"GO:0090433"}],"mondo":[{"annotations":[85976],"is_not":false,"summary":null,"term":"MONDO:0010313"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03471","GOA:B6K4B7","InterPro:IPR000873","EnsemblGenomes-Tr:EEB08324","InterPro:IPR020845","UniProtKB/TrEMBL:B6K4B7"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mrt4","uniquename":"SJAG_03466"},{"name":"trs20","uniquename":"SJAG_03467"},{"name":"rpa34","uniquename":"SJAG_03468"},{"name":"sme1","uniquename":"SJAG_03469"},{"name":"mtr10","uniquename":"SJAG_03470"},{"name":"lcf1","uniquename":"SJAG_03471"},{"name":"tif307","uniquename":"SJAG_03472"},{"name":"scr1","uniquename":"SJAG_03473"},{"uniquename":"SJAG_06600"},{"name":"sua1","uniquename":"SJAG_03475"},{"name":"cox18","uniquename":"SJAG_05302"}],"genes_by_uniquename":{"HGNC:3570":null,"HGNC:3571":null,"SJAG_03471":null,"SPBC18H10.02":null,"YIL009W":null,"YMR246W":null,"YOR317W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"AMP-binding enzyme","id":"PF00501","interpro_description":"AMP-dependent synthetase/ligase domain","interpro_id":"IPR000873","interpro_name":"AMP-dep_synth/lig_dom","locations":[{"end":497,"start":83}],"match_end":497,"match_start":83,"name":"AMP-binding"},{"dbname":"PROSITE_PATTERNS","description":"Putative AMP-binding domain signature.","id":"PS00455","interpro_description":"AMP-binding, conserved site","interpro_id":"IPR020845","interpro_name":"AMP-binding_CS","locations":[{"end":255,"start":244}],"match_end":255,"match_start":244,"name":"AMP_BINDING"},{"dbname":"SUPERFAMILY","id":"SSF56801","locations":[{"end":60,"start":19},{"end":354,"start":89},{"end":673,"start":395}],"match_end":673,"match_start":19,"name":"Acetyl-CoA synthetase-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.12780","interpro_description":"ANL, N-terminal domain","interpro_id":"IPR042099","interpro_name":"ANL_N_sf","locations":[{"end":362,"start":58},{"end":532,"start":402}],"match_end":532,"match_start":58},{"dbname":"PANTHER","id":"PTHR43272","locations":[{"end":673,"start":13}],"match_end":673,"match_start":13,"name":"LONG-CHAIN-FATTY-ACID--COA LIGASE"}],"location":{"chromosome_name":"supercont5.2","end_pos":1152350,"start_pos":1150206,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":117,"start":107}}],"name":"lcf1","ortholog_annotations":[{"gene_uniquename":"SJAG_03471","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3570","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03471","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3571","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03471","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03471","ortholog_taxonid":4932,"ortholog_uniquename":"YIL009W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03471","ortholog_taxonid":4932,"ortholog_uniquename":"YIL009W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03471","ortholog_taxonid":4932,"ortholog_uniquename":"YMR246W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03471","ortholog_taxonid":4932,"ortholog_uniquename":"YMR246W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_03471","ortholog_taxonid":4932,"ortholog_uniquename":"YOR317W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03471","ortholog_taxonid":4932,"ortholog_uniquename":"YOR317W","reference_uniquename":"PMID:26896847"}],"product":"long-chain-fatty-acid-CoA ligase Lcf1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0090434","GO:0090432","GO:0016887","GO:0090433"]}},"subset_termids":["GO:0006790","GO:0016887","GO:0006629","GO:0016874","GO:0005886","GO:0005783","GO:0055086"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001676":null,"GO:0005524":null,"GO:0005783":null,"GO:0005811":null,"GO:0005886":null,"GO:0016887":null,"GO:0035336":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null,"MONDO:0010313":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03471.1"],"transcripts_by_uniquename":{"SJAG_03471.1":null},"uniprot_identifier":"B6K4B7","uniquename":"SJAG_03471"}


id: SJAG_03472
data:
  {"cv_annotations":{"biological_process":[{"annotations":[63692],"is_not":false,"summary":null,"term":"GO:0001732"}],"cellular_component":[{"annotations":[105362],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[63690],"is_not":false,"summary":null,"term":"GO:0016282"},{"annotations":[63691],"is_not":false,"summary":null,"term":"GO:0033290"},{"annotations":[105366],"is_not":false,"summary":null,"term":"GO:0071540"},{"annotations":[105367],"is_not":false,"summary":null,"term":"GO:0071541"}],"molecular_function":[{"annotations":[63683],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[63684],"is_not":false,"summary":null,"term":"GO:0003743"}]},"dbxrefs":["InterPro:IPR024675","InterPro:IPR012677","InterPro:IPR000504","InterPro:IPR035979","GOA:B6K4B8","InterPro:IPR017334","EnsemblGenomes-Gn:SJAG_03472","UniProtKB/TrEMBL:B6K4B8","InterPro:IPR034240","EnsemblGenomes-Tr:EEB08325"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":34,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"trs20","uniquename":"SJAG_03467"},{"name":"rpa34","uniquename":"SJAG_03468"},{"name":"sme1","uniquename":"SJAG_03469"},{"name":"mtr10","uniquename":"SJAG_03470"},{"name":"lcf1","uniquename":"SJAG_03471"},{"name":"tif307","uniquename":"SJAG_03472"},{"name":"scr1","uniquename":"SJAG_03473"},{"uniquename":"SJAG_06600"},{"name":"sua1","uniquename":"SJAG_03475"},{"name":"cox18","uniquename":"SJAG_05302"},{"name":"zta1","uniquename":"SJAG_03476"}],"genes_by_uniquename":{"HGNC:3274":null,"SJAG_03472":null,"SPBC18H10.03":null,"YDR429C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Eukaryotic translation initiation factor 3 subunit G","id":"PF12353","interpro_description":"Eukaryotic translation initiation factor 3 subunit G, N-terminal","interpro_id":"IPR024675","interpro_name":"eIF3g_N","locations":[{"end":147,"start":21}],"match_end":147,"match_start":21,"name":"eIF3g"},{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":265,"start":203}],"match_end":265,"match_start":203,"name":"RRM_1"},{"dbname":"CDD","description":"RRM_eIF3G_like","id":"cd12408","interpro_description":"eIF3G, RNA recognition motif","interpro_id":"IPR034240","interpro_name":"eIF3G_RRM","locations":[{"end":277,"start":202}],"match_end":277,"match_start":202,"name":"RRM_eIF3G_like"},{"dbname":"CDD","description":"eIF3G","id":"cd12933","interpro_description":"Eukaryotic translation initiation factor 3 subunit G, N-terminal","interpro_id":"IPR024675","interpro_name":"eIF3g_N","locations":[{"end":146,"start":28}],"match_end":146,"match_start":28,"name":"eIF3G"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":279,"start":201}],"match_end":279,"match_start":201,"name":"RRM"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":275,"start":202}],"match_end":275,"match_start":202,"name":"rrm1_1"},{"dbname":"FUNFAM","description":"Eukaryotic translation initiation factor 3 subunit G","id":"G3DSA:3.30.70.330:FF:000328","locations":[{"end":281,"start":178}],"match_end":281,"match_start":178},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":280,"start":177}],"match_end":280,"match_start":177,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":281,"start":182}],"match_end":281,"match_start":182},{"dbname":"PANTHER","id":"PTHR10352","locations":[{"end":278,"start":25}],"match_end":278,"match_start":25,"name":"EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G"},{"dbname":"PIRSF","id":"PIRSF037949","interpro_description":"Eukaryotic translation initiation factor 3 subunit G","interpro_id":"IPR017334","interpro_name":"eIF3_g","locations":[{"end":281,"start":1}],"match_end":281,"match_start":1,"name":"Transl_init_eIF-3_RNA-bind"},{"dbname":"HAMAP","description":"Eukaryotic translation initiation factor 3 subunit G [EIF3G].","id":"MF_03006","interpro_description":"Eukaryotic translation initiation factor 3 subunit G","interpro_id":"IPR017334","interpro_name":"eIF3_g","locations":[{"end":281,"start":6}],"match_end":281,"match_start":6,"name":"eIF3g"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":34,"start":1}],"match_end":34,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":33,"start":18}],"match_end":33,"match_start":18,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1153893,"start_pos":1152968,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":56,"start":42}},{"range":{"end":172,"start":158}}],"name":"tif307","ortholog_annotations":[{"gene_uniquename":"SJAG_03472","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3274","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03472","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC18H10.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03472","ortholog_taxonid":4932,"ortholog_uniquename":"YDR429C","reference_uniquename":"PMID:29761456"}],"product":"translation initiation factor eIF3g","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"],"not-binding":["GO:0003743"]}},"subset_termids":["GO:0065003","GO:0005829","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0001732":null,"GO:0003723":null,"GO:0003743":null,"GO:0005829":null,"GO:0016282":null,"GO:0033290":null,"GO:0071540":null,"GO:0071541":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03472.1"],"transcripts_by_uniquename":{"SJAG_03472.1":null},"uniprot_identifier":"B6K4B8","uniquename":"SJAG_03472"}


id: SJAG_03473
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106011],"is_not":false,"summary":null,"term":"GO:0060257"},{"annotations":[106012],"is_not":false,"summary":null,"term":"GO:0000122"}],"cellular_component":[{"annotations":[106008],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106009],"is_not":false,"summary":null,"term":"GO:0005654"}],"molecular_function":[{"annotations":[106013],"is_not":false,"summary":null,"term":"GO:0001227"},{"annotations":[72259],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[60028],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["GOA:B6K4B9","EnsemblGenomes-Gn:SJAG_03473","InterPro:IPR013087","InterPro:IPR036236","UniProtKB/TrEMBL:B6K4B9","EnsemblGenomes-Tr:EEB08326"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":20,"start":1}},{"range":{"end":87,"start":65}},{"range":{"end":130,"start":106}},{"range":{"end":319,"start":290}},{"range":{"end":461,"start":387}},{"range":{"end":637,"start":495}},{"range":{"end":825,"start":767}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpa34","uniquename":"SJAG_03468"},{"name":"sme1","uniquename":"SJAG_03469"},{"name":"mtr10","uniquename":"SJAG_03470"},{"name":"lcf1","uniquename":"SJAG_03471"},{"name":"tif307","uniquename":"SJAG_03472"},{"name":"scr1","uniquename":"SJAG_03473"},{"uniquename":"SJAG_06600"},{"name":"sua1","uniquename":"SJAG_03475"},{"name":"cox18","uniquename":"SJAG_05302"},{"name":"zta1","uniquename":"SJAG_03476"},{"name":"ist1","uniquename":"SJAG_05303"}],"genes_by_uniquename":{"SJAG_03473":null,"SPBC1D7.02c":null,"YER028C":null,"YGL035C":null,"YGL209W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Zinc finger, C2H2 type","id":"PF00096","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":44,"start":22},{"end":74,"start":50}],"match_end":74,"match_start":22,"name":"zf-C2H2"},{"dbname":"PROSITE_PATTERNS","description":"Zinc finger C2H2 type domain signature.","id":"PS00028","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":44,"start":24},{"end":74,"start":52}],"match_end":74,"match_start":24,"name":"ZINC_FINGER_C2H2_1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger C2H2 type domain profile.","id":"PS50157","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":79,"start":22}],"match_end":79,"match_start":22,"name":"ZINC_FINGER_C2H2_2"},{"dbname":"SMART","id":"SM00355","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":44,"start":22},{"end":74,"start":50}],"match_end":74,"match_start":22,"name":"c2h2final6"},{"dbname":"FUNFAM","description":"DNA-binding protein creA","id":"G3DSA:3.30.160.60:FF:000089","locations":[{"end":47,"start":20}],"match_end":47,"match_start":20},{"dbname":"FUNFAM","description":"DNA-binding protein creA","id":"G3DSA:3.30.160.60:FF:000152","locations":[{"end":81,"start":48}],"match_end":81,"match_start":48},{"dbname":"SUPERFAMILY","id":"SSF57667","interpro_description":"Zinc finger C2H2 superfamily","interpro_id":"IPR036236","interpro_name":"Znf_C2H2_sf","locations":[{"end":74,"start":20}],"match_end":74,"match_start":20,"name":"beta-beta-alpha zinc fingers"},{"dbname":"GENE3D","id":"G3DSA:3.30.160.60","locations":[{"end":79,"start":20}],"match_end":79,"match_start":20,"name":"Classic Zinc Finger"},{"dbname":"PANTHER","id":"PTHR47428","interpro_description":"creA/MIG C2H2-type Zinc-Finger","interpro_id":"IPR051007","interpro_name":"creA/MIG_C2H2-ZnF","locations":[{"end":810,"start":4}],"match_end":810,"match_start":4,"name":"REGULATORY PROTEIN MIG1-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":20,"start":1},{"end":87,"start":65},{"end":130,"start":106},{"end":319,"start":290},{"end":461,"start":387},{"end":637,"start":495},{"end":825,"start":767}],"match_end":825,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":87,"start":75},{"end":117,"start":106},{"end":402,"start":388},{"end":428,"start":412},{"end":541,"start":526},{"end":630,"start":620},{"end":805,"start":778}],"match_end":805,"match_start":75,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":16,"start":7},{"end":511,"start":497},{"end":777,"start":767},{"end":825,"start":816}],"match_end":825,"match_start":7,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1158374,"start_pos":1155860,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":116,"start":74}},{"range":{"end":233,"start":223}},{"range":{"end":268,"start":257}},{"range":{"end":312,"start":306}},{"range":{"end":355,"start":330}},{"range":{"end":401,"start":387}},{"range":{"end":435,"start":406}},{"range":{"end":488,"start":457}},{"range":{"end":540,"start":525}},{"range":{"end":601,"start":584}},{"range":{"end":629,"start":607}},{"range":{"end":754,"start":741}},{"range":{"end":804,"start":777}}],"name":"scr1","ortholog_annotations":[{"gene_uniquename":"SJAG_03473","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC1D7.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03473","ortholog_taxonid":4932,"ortholog_uniquename":"YER028C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03473","ortholog_taxonid":4932,"ortholog_uniquename":"YGL035C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03473","ortholog_taxonid":4932,"ortholog_uniquename":"YGL209W","reference_uniquename":"PMID:29761456"}],"product":"DNA-binding transcription repressor, glucose sensing, Scr1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000978","GO:0008270"],"not-binding":["GO:0001227"]}},"subset_termids":["GO:0007155","GO:0006351","GO:0005634","GO:0005829","GO:0006355","GO:0003700","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0000978":null,"GO:0001227":null,"GO:0005654":null,"GO:0005829":null,"GO:0008270":null,"GO:0060257":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03473.1"],"transcripts_by_uniquename":{"SJAG_03473.1":null},"uniprot_identifier":"B6K4B9","uniquename":"SJAG_03473"}


id: SJAG_03475
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":197,"start":197}},{"assigned_by":"UniProtKB","range":{"end":198,"start":198}},{"assigned_by":"UniProtKB","range":{"end":199,"start":199}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":199,"start":196}},{"assigned_by":"UniProtKB","ligand":"sulfate","range":{"end":196,"start":196}},{"assigned_by":"UniProtKB","ligand":"sulfate","range":{"end":198,"start":198}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":293,"start":290}},{"assigned_by":"UniProtKB","ligand":"sulfate","range":{"end":294,"start":294}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":332,"start":332}}],"cv_annotations":{"biological_process":[{"annotations":[66520],"is_not":false,"summary":null,"term":"GO:0000103"}],"cellular_component":[{"annotations":[107265],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107266],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[66516],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[66517],"is_not":false,"summary":null,"term":"GO:0004781"}],"mondo":[{"annotations":[85084],"is_not":false,"summary":null,"term":"MONDO:0019666"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03475","InterPro:IPR015947","InterPro:IPR024951","InterPro:IPR014729","InterPro:IPR002650","UniProtKB/TrEMBL:B6K4C0","GOA:B6K4C0","InterPro:IPR025980","InterPro:IPR027535","EnsemblGenomes-Tr:EEB08327"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mtr10","uniquename":"SJAG_03470"},{"name":"lcf1","uniquename":"SJAG_03471"},{"name":"tif307","uniquename":"SJAG_03472"},{"name":"scr1","uniquename":"SJAG_03473"},{"uniquename":"SJAG_06600"},{"name":"sua1","uniquename":"SJAG_03475"},{"name":"cox18","uniquename":"SJAG_05302"},{"name":"zta1","uniquename":"SJAG_03476"},{"name":"ist1","uniquename":"SJAG_05303"},{"name":"dbp6","uniquename":"SJAG_03479"},{"name":"eaf1","uniquename":"SJAG_03481"}],"genes_by_uniquename":{"HGNC:8603":null,"HGNC:8604":null,"SJAG_03475":null,"SPBC27.08c":null,"YJR010W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"ATP-sulfurylase","id":"PF01747","interpro_description":"Sulphate adenylyltransferase catalytic domain","interpro_id":"IPR024951","interpro_name":"Sulfurylase_cat_dom","locations":[{"end":386,"start":172}],"match_end":386,"match_start":172,"name":"ATP-sulfurylase"},{"dbname":"PFAM","description":"PUA-like domain","id":"PF14306","interpro_description":"ATP-sulfurylase PUA-like domain","interpro_id":"IPR025980","interpro_name":"ATP-Sase_PUA-like_dom","locations":[{"end":162,"start":8}],"match_end":162,"match_start":8,"name":"PUA_2"},{"dbname":"CDD","description":"ATPS","id":"cd00517","interpro_description":"Sulphate adenylyltransferase","interpro_id":"IPR002650","interpro_name":"Sulphate_adenylyltransferase","locations":[{"end":387,"start":30}],"match_end":387,"match_start":30,"name":"ATPS"},{"dbname":"FUNFAM","description":"Sulfate adenylyltransferase","id":"G3DSA:3.40.50.620:FF:000052","locations":[{"end":388,"start":189}],"match_end":388,"match_start":189},{"dbname":"SUPERFAMILY","id":"SSF88697","interpro_description":"PUA-like superfamily","interpro_id":"IPR015947","interpro_name":"PUA-like_sf","locations":[{"end":169,"start":8}],"match_end":169,"match_start":8,"name":"PUA domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52374","locations":[{"end":389,"start":170}],"match_end":389,"match_start":170,"name":"Nucleotidylyl transferase"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":492,"start":390}],"match_end":492,"match_start":390},{"dbname":"GENE3D","id":"G3DSA:3.10.400.10","locations":[{"end":189,"start":4}],"match_end":189,"match_start":4,"name":"Sulfate adenylyltransferase"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.620","interpro_description":"Rossmann-like alpha/beta/alpha sandwich fold","interpro_id":"IPR014729","interpro_name":"Rossmann-like_a/b/a_fold","locations":[{"end":388,"start":190}],"match_end":388,"match_start":190,"name":"HUPs"},{"dbname":"PANTHER","id":"PTHR42700","interpro_description":"Sulfate Adenylyltransferase/APS Kinase","interpro_id":"IPR050512","interpro_name":"Sulf_AdTrans/APS_kinase","locations":[{"end":481,"start":7}],"match_end":481,"match_start":7,"name":"SULFATE ADENYLYLTRANSFERASE"},{"dbname":"HAMAP","description":"Sulfate adenylyltransferase [MET3].","id":"MF_03106","interpro_description":"Sulfate adenylyltransferase","interpro_id":"IPR027535","interpro_name":"Sulf_adenylyltr_euk","locations":[{"end":492,"start":1}],"match_end":492,"match_start":1,"name":"Sulf_adenylyltr_euk"},{"dbname":"NCBIFAM","description":"sulfate adenylyltransferase","id":"TIGR00339","interpro_description":"Sulphate adenylyltransferase","interpro_id":"IPR002650","interpro_name":"Sulphate_adenylyltransferase","locations":[{"end":385,"start":8}],"match_end":385,"match_start":8,"name":"sopT"}],"location":{"chromosome_name":"supercont5.2","end_pos":1162997,"start_pos":1161519,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":454,"start":443}}],"name":"sua1","ortholog_annotations":[{"gene_uniquename":"SJAG_03475","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8603","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03475","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8604","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03475","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC27.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03475","ortholog_taxonid":4932,"ortholog_uniquename":"YJR010W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03475","ortholog_taxonid":4932,"ortholog_uniquename":"YJR010W","reference_uniquename":"PMID:26896847"}],"product":"sulfate adenylyltransferase","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004781"]}},"subset_termids":["GO:0016779","GO:0006790","GO:0005829","GO:0005739","MONDO:0005066","MONDO:0005497"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000103":null,"GO:0004781":null,"GO:0005524":null,"GO:0005739":null,"GO:0005829":null,"MONDO:0019666":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03475.1"],"transcripts_by_uniquename":{"SJAG_03475.1":null},"uniprot_identifier":"B6K4C0","uniquename":"SJAG_03475"}


id: SJAG_03476
data:
  {"cv_annotations":{"biological_process":[{"annotations":[114445],"is_not":false,"summary":null,"term":"GO:1990748"}],"cellular_component":[{"annotations":[74117],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[114444],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[74116],"is_not":false,"summary":null,"term":"GO:0035925"},{"annotations":[74119],"is_not":false,"summary":null,"term":"GO:0070402"},{"annotations":[74118],"is_not":false,"summary":null,"term":"GO:0003960"}]},"dbxrefs":["GOA:B6K4C2","InterPro:IPR013149","EnsemblGenomes-Gn:SJAG_03476","EnsemblGenomes-Tr:EEB08329","InterPro:IPR011032","UniProtKB/TrEMBL:B6K4C2","InterPro:IPR036291","InterPro:IPR013154","InterPro:IPR020843"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tif307","uniquename":"SJAG_03472"},{"name":"scr1","uniquename":"SJAG_03473"},{"uniquename":"SJAG_06600"},{"name":"sua1","uniquename":"SJAG_03475"},{"name":"cox18","uniquename":"SJAG_05302"},{"name":"zta1","uniquename":"SJAG_03476"},{"name":"ist1","uniquename":"SJAG_05303"},{"name":"dbp6","uniquename":"SJAG_03479"},{"name":"eaf1","uniquename":"SJAG_03481"},{"name":"ptc2","uniquename":"SJAG_03482"},{"name":"meu10","uniquename":"SJAG_03483"}],"genes_by_uniquename":{"HGNC:2419":null,"SJAG_03476":null,"SPCC1442.16c":null,"YBR046C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Alcohol dehydrogenase GroES-like domain","id":"PF08240","interpro_description":"Alcohol dehydrogenase-like, N-terminal","interpro_id":"IPR013154","interpro_name":"ADH-like_N","locations":[{"end":109,"start":27}],"match_end":109,"match_start":27,"name":"ADH_N"},{"dbname":"PFAM","description":"Zinc-binding dehydrogenase","id":"PF00107","interpro_description":"Alcohol dehydrogenase-like, C-terminal","interpro_id":"IPR013149","interpro_name":"ADH-like_C","locations":[{"end":256,"start":150}],"match_end":256,"match_start":150,"name":"ADH_zinc_N"},{"dbname":"CDD","description":"QOR2","id":"cd05286","interpro_description":"Quinone oxidoreductase-like","interpro_id":"IPR047618","interpro_name":"QOR-like","locations":[{"end":320,"start":3}],"match_end":320,"match_start":3,"name":"QOR2"},{"dbname":"SMART","id":"SM00829","interpro_description":"Polyketide synthase, enoylreductase domain","interpro_id":"IPR020843","interpro_name":"PKS_ER","locations":[{"end":318,"start":11}],"match_end":318,"match_start":11,"name":"PKS_ER_names_mod"},{"dbname":"FUNFAM","description":"Quinone oxidoreductase 1","id":"G3DSA:3.40.50.720:FF:000053","locations":[{"end":264,"start":122}],"match_end":264,"match_start":122},{"dbname":"SUPERFAMILY","id":"SSF51735","interpro_description":"NAD(P)-binding domain superfamily","interpro_id":"IPR036291","interpro_name":"NAD(P)-bd_dom_sf","locations":[{"end":269,"start":111}],"match_end":269,"match_start":111,"name":"NAD(P)-binding Rossmann-fold domains"},{"dbname":"SUPERFAMILY","id":"SSF50129","interpro_description":"GroES-like superfamily","interpro_id":"IPR011032","interpro_name":"GroES-like_sf","locations":[{"end":143,"start":9}],"match_end":143,"match_start":9,"name":"GroES-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.720","locations":[{"end":264,"start":122}],"match_end":264,"match_start":122},{"dbname":"GENE3D","id":"G3DSA:3.90.180.10","locations":[{"end":121,"start":11},{"end":314,"start":265}],"match_end":314,"match_start":11},{"dbname":"PANTHER","id":"PTHR48106","locations":[{"end":319,"start":6}],"match_end":319,"match_start":6,"name":"QUINONE OXIDOREDUCTASE PIG3-RELATED"}],"location":{"chromosome_name":"supercont5.2","end_pos":1165097,"start_pos":1164135,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":151,"start":141}}],"name":"zta1","ortholog_annotations":[{"gene_uniquename":"SJAG_03476","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2419","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03476","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1442.16c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03476","ortholog_taxonid":4932,"ortholog_uniquename":"YBR046C","reference_uniquename":"PMID:29761456"}],"product":"NADPH quinone oxidoreductase/ARE-binding protein","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0035925","GO:0070402"],"not-binding":["GO:0003960"]}},"subset_termids":["GO:0098754","GO:0005829","GO:0016491","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003960":null,"GO:0005634":null,"GO:0005829":null,"GO:0035925":null,"GO:0070402":null,"GO:1990748":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03476.1"],"transcripts_by_uniquename":{"SJAG_03476.1":null},"uniprot_identifier":"B6K4C2","uniquename":"SJAG_03476"}


id: SJAG_03479
data:
  {"coiled_coil_coords":[{"range":{"end":55,"start":28}}],"cv_annotations":{"biological_process":[{"annotations":[116105],"is_not":false,"summary":null,"term":"GO:0006364"}],"cellular_component":[{"annotations":[116102],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[116103],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[61617],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[61620],"is_not":false,"summary":null,"term":"GO:0003723"},{"annotations":[116107],"is_not":false,"summary":null,"term":"GO:0003724"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_03479","InterPro:IPR014014","InterPro:IPR027417","EnsemblGenomes-Tr:EEB08331","InterPro:IPR000629","UniProtKB/TrEMBL:B6K4C4","InterPro:IPR011545","GOA:B6K4C4","InterPro:IPR001650","InterPro:IPR014001"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":69,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_06600"},{"name":"sua1","uniquename":"SJAG_03475"},{"name":"cox18","uniquename":"SJAG_05302"},{"name":"zta1","uniquename":"SJAG_03476"},{"name":"ist1","uniquename":"SJAG_05303"},{"name":"dbp6","uniquename":"SJAG_03479"},{"name":"eaf1","uniquename":"SJAG_03481"},{"name":"ptc2","uniquename":"SJAG_03482"},{"name":"meu10","uniquename":"SJAG_03483"},{"name":"cbf12","uniquename":"SJAG_03484"},{"name":"aro2","uniquename":"SJAG_03485"}],"genes_by_uniquename":{"HGNC:20082":null,"SJAG_03479":null,"SPCC285.03":null,"YNR038W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DEAD/DEAH box helicase","id":"PF00270","interpro_description":"DEAD/DEAH box helicase domain","interpro_id":"IPR011545","interpro_name":"DEAD/DEAH_box_helicase_dom","locations":[{"end":370,"start":155}],"match_end":370,"match_start":155,"name":"DEAD"},{"dbname":"PFAM","description":"Helicase conserved C-terminal domain","id":"PF00271","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":534,"start":420}],"match_end":534,"match_start":420,"name":"Helicase_C"},{"dbname":"CDD","description":"DEADc_DDX51","id":"cd17956","locations":[{"end":383,"start":126}],"match_end":383,"match_start":126,"name":"DEADc_DDX51"},{"dbname":"CDD","description":"SF2_C_DEAD","id":"cd18787","locations":[{"end":543,"start":420}],"match_end":543,"match_start":420,"name":"SF2_C_DEAD"},{"dbname":"PROSITE_PATTERNS","description":"DEAD-box subfamily ATP-dependent helicases signature.","id":"PS00039","interpro_description":"ATP-dependent RNA helicase DEAD-box, conserved site","interpro_id":"IPR000629","interpro_name":"RNA-helicase_DEAD-box_CS","locations":[{"end":289,"start":281}],"match_end":289,"match_start":281,"name":"DEAD_ATP_HELICASE"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase C-terminal domain profile.","id":"PS51194","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":583,"start":423}],"match_end":583,"match_start":423,"name":"HELICASE_CTER"},{"dbname":"PROSITE_PROFILES","description":"Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.","id":"PS51192","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":382,"start":157}],"match_end":382,"match_start":157,"name":"HELICASE_ATP_BIND_1"},{"dbname":"SMART","id":"SM00487","interpro_description":"Helicase superfamily 1/2, ATP-binding domain","interpro_id":"IPR014001","interpro_name":"Helicase_ATP-bd","locations":[{"end":398,"start":134}],"match_end":398,"match_start":134,"name":"ultradead3"},{"dbname":"SMART","id":"SM00490","interpro_description":"Helicase, C-terminal domain-like","interpro_id":"IPR001650","interpro_name":"Helicase_C-like","locations":[{"end":534,"start":447}],"match_end":534,"match_start":447,"name":"helicmild6"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":300,"start":196},{"end":550,"start":353}],"match_end":550,"match_start":196,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":308,"start":104},{"end":387,"start":356},{"end":600,"start":415}],"match_end":600,"match_start":104},{"dbname":"PANTHER","id":"PTHR24031","locations":[{"end":568,"start":58}],"match_end":568,"match_start":58,"name":"RNA HELICASE"},{"dbname":"COILS","id":"Coil","locations":[{"end":55,"start":28}],"match_end":55,"match_start":28,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":69,"start":1}],"match_end":69,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":66,"start":54}],"match_end":66,"match_start":54,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":13,"start":1},{"end":45,"start":25}],"match_end":45,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1168496,"start_pos":1166691,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":64,"start":50}},{"range":{"end":383,"start":373}},{"range":{"end":433,"start":421}}],"name":"dbp6","ortholog_annotations":[{"gene_uniquename":"SJAG_03479","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20082","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03479","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC285.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03479","ortholog_taxonid":4932,"ortholog_uniquename":"YNR038W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03479","ortholog_taxonid":4932,"ortholog_uniquename":"YNR038W","reference_uniquename":"PMID:26896847"}],"product":"ATP-dependent RNA helicase Dbp6","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0003723"],"not-binding":["GO:0003724"]}},"subset_termids":["GO:0005730","GO:0042254","GO:0005829","GO:0016853","GO:0140098","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003723":null,"GO:0003724":null,"GO:0005524":null,"GO:0005730":null,"GO:0005829":null,"GO:0006364":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03479.1"],"transcripts_by_uniquename":{"SJAG_03479.1":null},"uniprot_identifier":"B6K4C4","uniquename":"SJAG_03479"}


id: SJAG_03481
data:
  {"cv_annotations":{"biological_process":[{"annotations":[113814],"is_not":false,"summary":null,"term":"GO:0006368"}],"cellular_component":[{"annotations":[59990],"is_not":false,"summary":null,"term":"GO:0032783"}],"molecular_function":[{"annotations":[72222],"is_not":false,"summary":null,"term":"GO:0003711"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB08332","InterPro:IPR019194","UniProtKB/TrEMBL:B6K4C5","GOA:B6K4C5","InterPro:IPR027093","EnsemblGenomes-Gn:SJAG_03481"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":323,"start":111}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sua1","uniquename":"SJAG_03475"},{"name":"cox18","uniquename":"SJAG_05302"},{"name":"zta1","uniquename":"SJAG_03476"},{"name":"ist1","uniquename":"SJAG_05303"},{"name":"dbp6","uniquename":"SJAG_03479"},{"name":"eaf1","uniquename":"SJAG_03481"},{"name":"ptc2","uniquename":"SJAG_03482"},{"name":"meu10","uniquename":"SJAG_03483"},{"name":"cbf12","uniquename":"SJAG_03484"},{"name":"aro2","uniquename":"SJAG_03485"},{"name":"ssp1","uniquename":"SJAG_03486"}],"genes_by_uniquename":{"HGNC:20907":null,"HGNC:23115":null,"SJAG_03481":null,"SPCC1223.10c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"RNA polymerase II transcription elongation factor","id":"PF09816","interpro_description":"Transcription elongation factor Eaf, N-terminal","interpro_id":"IPR019194","interpro_name":"Tscrpt_elong_fac_Eaf_N","locations":[{"end":108,"start":9}],"match_end":108,"match_start":9,"name":"EAF"},{"dbname":"PANTHER","id":"PTHR15970","interpro_description":"EAF family","interpro_id":"IPR027093","interpro_name":"EAF_fam","locations":[{"end":322,"start":4}],"match_end":322,"match_start":4,"name":"ELL-ASSOCIATED FACTOR EAF"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":323,"start":111}],"match_end":323,"match_start":111,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":174,"start":147},{"end":244,"start":220},{"end":323,"start":307}],"match_end":323,"match_start":147,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":268,"start":258}],"match_end":268,"match_start":258,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":146,"start":132},{"end":184,"start":175}],"match_end":184,"match_start":132,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1170617,"start_pos":1169359,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":173,"start":146}},{"range":{"end":209,"start":191}},{"range":{"end":243,"start":219}},{"range":{"end":272,"start":251}},{"range":{"end":319,"start":306}}],"name":"eaf1","ortholog_annotations":[{"gene_uniquename":"SJAG_03481","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20907","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03481","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23115","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03481","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1223.10c","reference_uniquename":"PMID:21511999"}],"product":"RNA polymerase II transcription elongation factor Eaf1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003711"]}},"subset_termids":["GO:0005634","GO:0003711","GO:0006351","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003711":null,"GO:0006368":null,"GO:0032783":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03481.1"],"transcripts_by_uniquename":{"SJAG_03481.1":null},"uniprot_identifier":"B6K4C5","uniquename":"SJAG_03481"}


id: SJAG_03482
data:
  {"cv_annotations":{"biological_process":[{"annotations":[113818],"is_not":false,"summary":null,"term":"GO:0030968"}],"cellular_component":[{"annotations":[113816],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[113817],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[61761],"is_not":false,"summary":null,"term":"GO:0043169"},{"annotations":[61762],"is_not":false,"summary":null,"term":"GO:0004722"}]},"dbxrefs":["InterPro:IPR036457","EnsemblGenomes-Tr:EEB08333","InterPro:IPR001932","EnsemblGenomes-Gn:SJAG_03482","InterPro:IPR000222","InterPro:IPR015655","UniProtKB/TrEMBL:B6K4C6","GOA:B6K4C6"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":369,"start":344}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cox18","uniquename":"SJAG_05302"},{"name":"zta1","uniquename":"SJAG_03476"},{"name":"ist1","uniquename":"SJAG_05303"},{"name":"dbp6","uniquename":"SJAG_03479"},{"name":"eaf1","uniquename":"SJAG_03481"},{"name":"ptc2","uniquename":"SJAG_03482"},{"name":"meu10","uniquename":"SJAG_03483"},{"name":"cbf12","uniquename":"SJAG_03484"},{"name":"aro2","uniquename":"SJAG_03485"},{"name":"ssp1","uniquename":"SJAG_03486"},{"name":"set7","uniquename":"SJAG_03487"}],"genes_by_uniquename":{"HGNC:9278":null,"SJAG_03482":null,"SPCC1223.11":null,"YBL056W":null,"YER089C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein phosphatase 2C","id":"PF00481","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":274,"start":24}],"match_end":274,"match_start":24,"name":"PP2C"},{"dbname":"CDD","description":"PP2Cc","id":"cd00143","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":287,"start":23}],"match_end":287,"match_start":23,"name":"PP2Cc"},{"dbname":"PROSITE_PATTERNS","description":"PPM-type phosphatase domain signature.","id":"PS01032","interpro_description":"PPM-type phosphatase, divalent cation binding","interpro_id":"IPR000222","interpro_name":"PP2C_BS","locations":[{"end":65,"start":57}],"match_end":65,"match_start":57,"name":"PPM_1"},{"dbname":"PROSITE_PROFILES","description":"PPM-type phosphatase domain profile.","id":"PS51746","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":289,"start":23}],"match_end":289,"match_start":23,"name":"PPM_2"},{"dbname":"SMART","id":"SM00332","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":287,"start":13}],"match_end":287,"match_start":13,"name":"PP2C_4"},{"dbname":"FUNFAM","description":"Protein phosphatase 2C","id":"G3DSA:3.60.40.10:FF:000016","locations":[{"end":295,"start":1}],"match_end":295,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF81606","interpro_description":"PPM-type phosphatase-like domain superfamily","interpro_id":"IPR036457","interpro_name":"PPM-type-like_dom_sf","locations":[{"end":288,"start":3}],"match_end":288,"match_start":3,"name":"PP2C-like"},{"dbname":"GENE3D","id":"G3DSA:3.60.40.10","interpro_description":"PPM-type phosphatase-like domain superfamily","interpro_id":"IPR036457","interpro_name":"PPM-type-like_dom_sf","locations":[{"end":294,"start":1}],"match_end":294,"match_start":1},{"dbname":"PANTHER","id":"PTHR13832","interpro_description":"Protein phosphatase 2C","interpro_id":"IPR015655","interpro_name":"PP2C","locations":[{"end":286,"start":27}],"match_end":286,"match_start":27,"name":"PROTEIN PHOSPHATASE 2C"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":369,"start":344}],"match_end":369,"match_start":344,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.2","end_pos":1173065,"start_pos":1171956,"strand":"forward"},"name":"ptc2","ortholog_annotations":[{"gene_uniquename":"SJAG_03482","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9278","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03482","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1223.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_03482","ortholog_taxonid":4932,"ortholog_uniquename":"YBL056W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_03482","ortholog_taxonid":4932,"ortholog_uniquename":"YER089C","reference_uniquename":"PMID:29761456"}],"product":"serine/threonine protein phosphatase PP2C catalytic subunit Ptc2","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0043169"],"not-binding":["GO:0004722"]}},"subset_termids":["GO:0023052","GO:0140096","GO:0016788","GO:0004721","GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004722":null,"GO:0005634":null,"GO:0005829":null,"GO:0030968":null,"GO:0043169":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_03482.1"],"transcripts_by_uniquename":{"SJAG_03482.1":null},"uniprot_identifier":"B6K4C6","uniquename":"SJAG_03482"}


