# terms

id: GO:0140810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H1 L-arginyl (position 54)= histone H1 L-citrullyl (position 54) + NH4+, resulting in histone H1 citrullination at position 54.","definition_xrefs":["PMID:24463520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone arginine deiminase activity","termid":"GO:0140794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"histone H1R54 arginine deiminase activity","synonyms":[{"name":"H1-R54 citrullination","type":"exact"},{"name":"histone H1-R54 deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H1-R54 specific)","type":"exact"}],"termid":"GO:0140810"}


id: PBO:0086598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is cell-cycle regulated as shown by microarray analysis; potential regulatory target of Mbp1p, which binds to the YJL181W promoter region; contains a PH-like domain; RBH1 has a paralog, RBH2, that arose from the whole genome duplication","termid":"PBO:0086598"}


id: PBO:0042049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 106","termid":"PBO:0042049"}


id: PBO:0026803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026803"}


id: GO:0060341
data:
  {"annotated_genes":["SJAG_03048","SJAG_03602","SJAG_01166","SJAG_03970","SJAG_02592","SJAG_01245","SJAG_04597","SJAG_01805","SJAG_04464","SJAG_01373","SJAG_00883","SJAG_01084","SJAG_04312","SJAG_04343","SJAG_02645","SJAG_01311","SJAG_04509","SJAG_03453","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[105575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[95610,90726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[94169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[106988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[114215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[95611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[94174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[93570,100198,101605,110762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[94132,102136,90613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[98187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[87660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[76403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[87664,91783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"},{"annotations":[107708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process in which a cell, a substance, or a cellular entity is transported to, or maintained in a specific location within or in the membrane of a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular localization","termid":"GO:0051641"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01084":null,"SJAG_01166":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02645":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03602":null,"SJAG_03970":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cellular localisation","type":"exact"}],"termid":"GO:0060341","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0046827":null,"GO:0060628":null,"GO:0120047":null,"GO:0140325":null,"GO:1900181":null,"GO:1902543":null,"GO:1902854":null,"GO:1903067":null,"GO:1903077":null,"GO:1905391":null,"GO:2001135":null}}


id: FYPO:0003554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of degradation of RNA transcribed from middle meiotic genes is increased during late meiosis. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:20531409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA catabolic process","termid":"FYPO:0003553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased degradation of middle meiotic gene mRNA during late meiosis","synonyms":[{"name":"increased breakdown of middle meiotic gene mRNA during late meiosis","type":"exact"},{"name":"increased catabolism of middle meiotic gene mRNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiosis gene mRNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiotic gene RNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiotic gene mRNA during late meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003554"}


id: GO:0047049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxystearate + NAD+ = 2-oxostearate + H+ + NADH.","definition_xrefs":["EC:1.1.1.98","RHEA:15949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(R)-2-hydroxy-fatty acid dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03021","MetaCyc:1.1.1.98-RXN"],"synonyms":[{"name":"(R)-2-hydroxy-fatty-acid dehydrogenase activity","type":"exact"},{"name":"(R)-2-hydroxystearate:NAD+ oxidoreductase activity","type":"related"},{"name":"2-hydroxy fatty acid oxidase","type":"broad"},{"name":"D-2-hydroxy fatty acid dehydrogenase activity","type":"related"}],"termid":"GO:0047049"}


id: PBO:0067991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 293","termid":"PBO:0067991"}


id: PBO:0089171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBP4H10.18c ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0089171"}


id: GO:0047985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2 + NAD+ = H+ + NADH.","definition_xrefs":["EC:1.12.1.2","MetaCyc:HYDROGEN-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydrogen dehydrogenase activity","secondary_identifiers":["RHEA:24636"],"synonyms":[{"name":"H(2):NAD(+) oxidoreductase activity","type":"related"},{"name":"H2:NAD+ oxidoreductase activity","type":"related"},{"name":"NAD-linked hydrogenase activity","type":"related"},{"name":"bidirectional hydrogenase activity","type":"broad"},{"name":"hydrogen:NAD+ oxidoreductase activity","type":"related"},{"name":"hydrogenase activity","type":"broad"}],"termid":"GO:0047985"}


id: SO:0001210
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA (not divisible by 3 bases) that is skipped or added during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_frameshift","secondary_identifiers":["http://en.wikipedia.org/wiki/Translational_frameshift"],"synonyms":[{"name":"INSDC_qualifier:ribosomal_slippage","type":"exact"},{"name":"ribosomal frameshift","type":"exact"},{"name":"ribosomal slippage","type":"exact"},{"name":"translational frameshift","type":"exact"}],"termid":"SO:0001210"}


id: PBO:0053864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1139","termid":"PBO:0053864"}


id: GO:0047667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + thymidine = adenosine + thymidine 5'-phosphate.","definition_xrefs":["EC:2.7.1.114","MetaCyc:AMP--THYMIDINE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"AMP-thymidine kinase activity","secondary_identifiers":["RHEA:14913"],"synonyms":[{"name":"AMP:dThd kinase activity","type":"related"},{"name":"AMP:deoxythymidine 5'-phosphotransferase activity","type":"related"},{"name":"AMP:deoxythymidine kinase activity","type":"related"},{"name":"AMP:thymidine 5'-phosphotransferase activity","type":"related"},{"name":"adenylate-nucleoside phosphotransferase activity","type":"related"},{"name":"adenylic acid:deoxythymidine 5'-phosphotransferase activity","type":"related"},{"name":"thymidine phosphotransferase activity","type":"related"}],"termid":"GO:0047667"}


id: GO:1903742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:25329901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"}


id: PBO:0065736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxidasin like","termid":"PBO:0065736"}


id: GO:0005642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stacks of endoplasmic reticulum (ER) membranes containing a high density of nuclear pores, thought to form from excess nuclear membrane components, that have been described in a number of different cells. Annulate lamellar membranes are continuous with and embedded within the ER.","definition_xrefs":["PMID:12631728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"nuclear outer membrane-endoplasmic reticulum membrane network","termid":"GO:0042175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"annulate lamellae","termid":"GO:0005642"}


id: PBO:0076057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin like 3","termid":"PBO:0076057"}


id: GO:1901340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of store-operated calcium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium channel activity","termid":"GO:1901339"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of store-operated calcium channel activity","synonyms":[{"name":"down regulation of store-operated calcium channel activity","type":"exact"},{"name":"down-regulation of store-operated calcium channel activity","type":"exact"},{"name":"downregulation of store-operated calcium channel activity","type":"exact"},{"name":"inhibition of store-operated calcium channel activity","type":"narrow"}],"termid":"GO:1901340"}


id: GO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The union or introduction of genetic information from compatible mating types that results in a genetically different individual. Conjugation requires direct cellular contact between the organisms.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete conjugation (obsolete GO:0000746)","secondary_identifiers":["Wikipedia:Conjugation"],"termid":"GO:0000746"}


id: PBO:0083575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps with verified gene GPR1/YDL035C; YDL034W is not an essential gene","termid":"PBO:0083575"}


id: PBO:0017760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly protein Mug56 (predicted)","termid":"PBO:0017760"}


id: GO:0018124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of the epsilon-amino group of a peptidyl-lysine with peptidyl-topaquinone, a modified tyrosine residue.","definition_xrefs":["RESID:AA0233"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 5'-(N6-L-lysine)-L-topaquinone (obsolete GO:0018124)","termid":"GO:0018124"}


id: PBO:0078803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 20-1","termid":"PBO:0078803"}


id: SO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mathematically defined repeat (MDR) is a experimental feature that is determined by querying overlapping oligomers of length k against a database of shotgun sequence data and identifying regions in the query sequence that exceed a statistically determined threshold of repetitiveness.","definition_xrefs":["SO:jestill"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mathematically_defined_repeat","synonyms":[{"name":"mathematically defined repeat","type":"exact"}],"termid":"SO:0001642"}


id: MONDO:0017737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"is_a","term_name":"free sialic acid storage disease","termid":"MONDO:0019366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intermediate severe Salla disease","secondary_identifiers":["MEDGEN:1843217","NANDO:1200148","NANDO:2201238","Orphanet:309331","UMLS:C5681076","GARD:10871"],"synonyms":[{"name":"Intermediate Salla disease","type":"related"}],"termid":"MONDO:0017737","xrefs":{"Monarch":{"xref_id":"0017737"}}}


id: SO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of nucleotides or amino acids which, by design, has a \\\"random\\\" order of components, given a predetermined input frequency of these components.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synthetic_sequence","termid":"SO:0000351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random_sequence","synonyms":[{"name":"random sequence","type":"exact"}],"termid":"SO:0000449"}


id: PBO:0038606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 3","termid":"PBO:0038606"}


id: MONDO:0014303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare and complex form of hereditary spastic paraplegia (see this term), reported in only 4 patients from 2 families to date, characterized by spastic paraplegia (presenting between the ages of 1 to 4 years with abnormal gait) associated with microcephaly, amyotrophy, cerebellar signs (e.g. dysarthria) aggressiveness, delayed puberty and mild to moderate intellectual disability. SPG64 is due to mutations in the ENTPD1 gene (10q24.1), encoding ectonucleoside triphosphate diphosphohydrolase 1.","definition_xrefs":["Orphanet:401810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 64","secondary_identifiers":["GARD:17659","DOID:0110815","SCTID:726609005","MEDGEN:816619","OMIM:615683","UMLS:C3810289"],"synonyms":[{"name":"ENTPD1 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG64","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in ENTPD1","type":"exact"},{"name":"autosomal recessive spastic paraplegia 64","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 64","type":"exact"},{"name":"hereditary spastic paraplegia type 64","type":"exact"},{"name":"spastic paraplegia 64, autosomal recessive","type":"related"}],"termid":"MONDO:0014303","xrefs":{"Monarch":{"xref_id":"0014303"}}}


id: PBO:0045318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double C2 domain alpha","termid":"PBO:0045318"}


id: MONDO:0016441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonheritable form of pseudoxanthoma elasticum (PXE), lacking the retinal and vascular stigmata associated with the inherited form of the disorder, but having skin lesions that are clinically, histologically, and ultrastructurally similar to those seen in the inherited type.","definition_xrefs":["PMID:528701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudoxanthoma elasticum (inherited or acquired)","termid":"MONDO:0024308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired pseudoxanthoma elasticum","secondary_identifiers":["ICD9:757.39","SCTID:403401007","icd11.foundation:2017339816","MEDGEN:698082","UMLS:C1274759","Orphanet:228247","GARD:20581"],"synonyms":[{"name":"acquired Gronblad-Strandberg-Touraine syndrome","type":"exact"},{"name":"acquired PXE","type":"exact"},{"name":"acquired pseudoxanthoma elasticum","type":"exact"},{"name":"acquired pseudoxanthoma elasticum (inherited or acquired)","type":"exact"},{"name":"localised acquired cutaneous pseudoxanthoma elasticum","type":"exact"},{"name":"localized acquired cutaneous pseudoxanthoma elasticum","type":"exact"}],"termid":"MONDO:0016441","xrefs":{"Monarch":{"xref_id":"0016441"}}}


id: GO:0039562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host STAT (signal transducer and activator of transcription). STATs are SH2 domain-containing proteins which lie downstream of many signaling receptors. Upon phosphorylation by JAKs, STAT proteins hetero- or homo-dimerize and translocate to the nucleus to activate transcription of target genes.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of STAT activity","synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of STAT activity","type":"narrow"},{"name":"inhibition by virus of host STAT activity","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of STAT activity","type":"exact"},{"name":"suppression by virus of host STAT activity","type":"exact"},{"name":"suppression by virus of host signal transducer and activator of transcription activity","type":"exact"}],"termid":"GO:0039562"}


id: GO:0060231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition","synonyms":[{"name":"epithelial cell differentiation from mesenchymal cell","type":"exact"},{"name":"mesenchymal-epithelial transition","type":"exact"}],"termid":"GO:0060231"}


id: PBO:0035857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_during_vegetative_growth","termid":"PBO:0035857"}


id: GO:0070539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to linoleic acid, the 18-carbon unsaturated fatty acid (9Z,12Z)-octadeca-9,12-dienoic acid.","definition_xrefs":["GOC:lp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"linoleic acid binding","termid":"GO:0070539"}


id: PBO:0078650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 3-1","termid":"PBO:0078650"}


id: MONDO:0007320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocalcinosis","termid":"MONDO:0001314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"chondrocalcinosis due to apatite crystal deposition","secondary_identifiers":["MESH:C535939","MEDGEN:349317","UMLS:C1861580","OMIM:118610"],"synonyms":[{"name":"chondrocalcinosis due to apatite crystal deposition","type":"exact"},{"name":"familial apatite disease","type":"related"}],"termid":"MONDO:0007320","xrefs":{"Monarch":{"xref_id":"0007320"}}}


id: GO:0090430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: caffeoyl-CoA + a saturated primary alcohol = an alkyl caffeate + CoA.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"caffeoyl-CoA: alcohol caffeoyl transferase activity","termid":"GO:0090430"}


id: GO:0010440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an unspecialized epidermal cell progresses through a series of divisions that culminate in the production of a stomatal complex.","definition_xrefs":["GOC:tb","GOC:expert_db"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"stomatal complex development","termid":"GO:0010374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal lineage progression","termid":"GO:0010440"}


id: PBO:0114359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, RNA-binding protein Cip1","termid":"PBO:0114359"}


id: PBO:0108890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 3","termid":"PBO:0108890"}


id: GO:1900616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emericellamide A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"emericellamide catabolic process","termid":"GO:1900556"},{"relation_name":"is_a","term_name":"emericellamide A metabolic process","termid":"GO:1900615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"emericellamide A catabolic process","synonyms":[{"name":"emericellamide A breakdown","type":"exact"},{"name":"emericellamide A catabolism","type":"exact"},{"name":"emericellamide A degradation","type":"exact"}],"termid":"GO:1900616"}


id: PBO:0065612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 6","termid":"PBO:0065612"}


id: GO:0031384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the start of mating projection formation by unicellular fungi.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating projection assembly","termid":"GO:0031383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of initiation of mating projection growth","termid":"GO:0031384"}


id: MONDO:0006726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired abnormality characterized by elevation of the hemidiaphragm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diaphragm disorder","termid":"MONDO:0005728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic eventration","secondary_identifiers":["SCTID:34168003","UMLS:C0011981","HP:0009110","DOID:10480","EFO:1000898","MESH:D003965","NCIT:C98912","MEDGEN:8359"],"synonyms":[{"name":"diaphragmatic eventration","type":"exact"},{"name":"diaphragmatic eventration (disease)","type":"exact"}],"termid":"MONDO:0006726","xrefs":{"Monarch":{"xref_id":"0006726"}}}


id: PBO:0050309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 11","termid":"PBO:0050309"}


id: GO:0075094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein beta subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction mediated by G-protein beta subunit (obsolete GO:0075094)","termid":"GO:0075094"}


id: PBO:0069536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 806, pseudogene","termid":"PBO:0069536"}


id: MONDO:0043094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited ichthyosis","termid":"MONDO:0015947"},{"relation_name":"is_a","term_name":"ichthyosis","termid":"MONDO:0019269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis, follicular","secondary_identifiers":["NANDO:1200628","SCTID:238627002","GARD:2355","MEDGEN:98025","UMLS:C0406344"],"synonyms":[{"name":"follicular ichthyosis","type":"exact"}],"termid":"MONDO:0043094","xrefs":{"Monarch":{"xref_id":"0043094"}}}


id: MONDO:0007089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an association of the apolipoprotein E E4 allele.","definition_xrefs":["PMID:8346443","DOID:0110035"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"},{"relation_name":"is_a","term_name":"familial Alzheimer disease","termid":"MONDO:0100087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"Alzheimer disease 2","secondary_identifiers":["GARD:12799","MESH:C536595","OMIM:104310","UMLS:C1863051","MEDGEN:400197"],"synonyms":[{"name":"AD2","type":"exact"},{"name":"Alzheimer disease 2","type":"exact"},{"name":"Alzheimer disease 2, late onset","type":"exact"},{"name":"Alzheimer disease 2, late-onset","type":"related"},{"name":"Alzheimer disease associated with APOE E4","type":"exact"},{"name":"Alzheimer disease associated with APOE4","type":"exact"},{"name":"Alzheimer disease type 2","type":"exact"},{"name":"Alzheimer disease-2","type":"exact"},{"name":"Alzheimer's disease 2","type":"exact"},{"name":"Alzheimer's disease type 2","type":"exact"},{"name":"LOFAD","type":"related"},{"name":"late onset Alzheimer disease","type":"exact"},{"name":"late onset familial Alzheimer disease","type":"exact"},{"name":"late-onset familial alzheimer disease","type":"exact"}],"termid":"MONDO:0007089","xrefs":{"Monarch":{"xref_id":"0007089"}}}


id: MONDO:0032629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 25","secondary_identifiers":["MEDGEN:1648366","GARD:16329","OMIM:618246","DOID:0112067","UMLS:C4748806"],"synonyms":[{"name":"MC1DN25","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 25","type":"related"}],"termid":"MONDO:0032629","xrefs":{"Monarch":{"xref_id":"0032629"}}}


id: GO:0043737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage at apurinic or apyrimidinic sites to products with a 5'-phosphate.","definition_xrefs":["EC:3.1.21.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"deoxyribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.21.7-RXN"],"synonyms":[{"name":"DNase V activity","type":"related"},{"name":"Escherichia coli endodeoxyribonuclease V activity","type":"narrow"},{"name":"endodeoxyribonuclease V","type":"exact"},{"name":"endonuclease V activity","type":"broad"}],"termid":"GO:0043737"}


id: GO:0050660
data:
  {"annotated_genes":["SJAG_04367","SJAG_04743","SJAG_01162","SJAG_00235","SJAG_03985","SJAG_03712","SJAG_04270","SJAG_04000","SJAG_03804","SJAG_01671","SJAG_00174","SJAG_01903","SJAG_03236","SJAG_04054","SJAG_01693","SJAG_04032","SJAG_04042","SJAG_01041","SJAG_04459","SJAG_02489","SJAG_02827","SJAG_04608","SJAG_02599","SJAG_03290","SJAG_00972","SJAG_03240","SJAG_00265","SJAG_02496","SJAG_01466","SJAG_00370","SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59563,60562,62408,64737,65584,65747,71468,74325,75808,75899,76118,76171,76978,78102,78838,78843,93873,112542,118520],"is_not":false,"summary":null,"term":"GO:0050660"},{"annotations":[59283,68809,70587,64355,69416,69434,71645,109432,112757,70007,75989,60623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071949"}]},"cv_name":"molecular_function","definition":"Binding to FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.","definition_xrefs":["GOC:imk","GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_00235":null,"SJAG_00265":null,"SJAG_00370":null,"SJAG_00972":null,"SJAG_01041":null,"SJAG_01063":null,"SJAG_01162":null,"SJAG_01466":null,"SJAG_01671":null,"SJAG_01693":null,"SJAG_01903":null,"SJAG_02489":null,"SJAG_02496":null,"SJAG_02599":null,"SJAG_02827":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_03290":null,"SJAG_03712":null,"SJAG_03804":null,"SJAG_03985":null,"SJAG_04000":null,"SJAG_04032":null,"SJAG_04042":null,"SJAG_04054":null,"SJAG_04270":null,"SJAG_04367":null,"SJAG_04459":null,"SJAG_04608":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"flavin adenine dinucleotide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"FAD or FADH2 binding","type":"exact"},{"name":"flavine-adenine dinucleotide binding","type":"exact"}],"termid":"GO:0050660","terms_by_termid":{"GO:0050660":null,"GO:0071949":null}}


id: PBO:0077302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 41B","termid":"PBO:0077302"}


id: SO:0001598
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within the transcript that changes the structure of the translational product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_product_structure_variant","synonyms":[{"name":"translational product structure variant","type":"exact"}],"termid":"SO:0001598"}


id: PBO:0003236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XP-A family homolog Rhp14","termid":"PBO:0003236"}


id: PBO:0075833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin receptor 1","termid":"PBO:0075833"}


id: PBO:0077938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPX2 microtubule nucleation factor","termid":"PBO:0077938"}


id: GO:0018303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0285"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide (obsolete GO:0018303)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018303"}


id: PBO:0050172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 28","termid":"PBO:0050172"}


id: MONDO:0042979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypokalemic periodic paralysis","termid":"MONDO:0008223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypokalemic periodic paralysis, type 1","secondary_identifiers":["MEDGEN:811387","OMIM:170400","UMLS:C3714580"],"synonyms":[{"name":"HOKPP1","type":"related"},{"name":"hypokalemic periodic paralysis, type 1","type":"exact"}],"termid":"MONDO:0042979","xrefs":{"Monarch":{"xref_id":"0042979"}}}


id: FYPO:0006298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of the 5.8S ribosomal RNA molecule is abnormal.","definition_xrefs":["GO:0000467","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"},{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal 5.8S rRNA 3'-end processing","synonyms":[{"name":"abnormal 5.8S rRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal 5.8S rRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"abnormal exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"FYPO:0006298"}


id: GO:0001595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with angiotensin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"angiotensin receptor activity","termid":"GO:0001595"}


id: PBO:0088082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein that interacts with Cdc48p; involved in degradation of polyubiquitinated proteins via the ERAD (ER-associated degradation) pathway; modulates the role of the Cdc48p-Nplp-Ufd1p AAA ATPase complex in delivery of misfolded proteins to the proteasome; protein abundance increases in response to DNA replication stress; human ortholog ASPSCR1 partially complements the yeast null mutant","termid":"PBO:0088082"}


id: PBO:0066026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 9","termid":"PBO:0066026"}


id: MONDO:0011353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrial septal defect, secundum, with various cardiac and Noncardiac defects","secondary_identifiers":["MESH:C566351","OMIM:603642","MEDGEN:400350","UMLS:C1863648"],"synonyms":[{"name":"atrial septal defect, secundum, with various cardiac and Noncardiac defects","type":"exact"}],"termid":"MONDO:0011353","xrefs":{"Monarch":{"xref_id":"0011353"}}}


id: FYPO:0002007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosomes form a single, irregularly-shaped mass in the nucleus.","definition_xrefs":["PMID:19074598","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0000654","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromosome morphology, single irregular mass","synonyms":[{"name":"abnormal chromatin organization with single irregular mass of chromatin","type":"related"},{"name":"abnormal chromosome morphology, single irregular mass during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome morphology, single irregular mass during vegetative growth","type":"exact"}],"termid":"FYPO:0002007"}


id: PBO:0047538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 4","termid":"PBO:0047538"}


id: FYPO:0002398
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[118939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003315"},{"annotations":[119356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton","termid":"FYPO:0005665"},{"relation_name":"output_of","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":4,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"abnormal actin cytoskeleton during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703","SJAG_02392","SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta","for3delta","pom1delta"],"synonyms":[{"name":"abnormal actin cytoskeleton during mitotic cell cycle","type":"related"},{"name":"abnormal actin cytoskeleton physical object quality during vegetative growth","type":"exact"}],"termid":"FYPO:0002398","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0043800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabino-hex-3-ulose 6-phosphate = beta-D-fructose 6-phosphate.","definition_xrefs":["PMID:11839305","RHEA:25900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"6-phospho-3-hexuloisomerase activity","secondary_identifiers":["MetaCyc:R12-RXN","EC:5.3.1.27"],"synonyms":[{"name":"HUMPI","type":"exact"},{"name":"hexulose-6-phosphate isomerase activity","type":"exact"}],"termid":"GO:0043800"}


id: MONDO:0011569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease, type 2B1 (CMT2B1, also referred to as CMT4C1) is an axonal CMT peripheral sensorimotor polyneuropathy.","definition_xrefs":["Orphanet:98856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2B1","secondary_identifiers":["GARD:8548","OMIM:605588","UMLS:C1854154","MEDGEN:343064","DOID:0110156","MESH:C537990","icd11.foundation:957134152","SCTID:725048002"],"synonyms":[{"name":"AR-CMT2B1","type":"exact"},{"name":"CMT 2B1","type":"related"},{"name":"CMT2B1","type":"exact"},{"name":"Charcot Marie Tooth disease type 2B1","type":"related"},{"name":"Charcot-Marie-Tooth disease neuronal type 2B1","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in LMNA","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, 2B1","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2B1","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2B1","type":"related"},{"name":"Charcot-Marie-Tooth disease, neuronal, type 2B1","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2B1","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2B1","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2B1","type":"related"},{"name":"LMNA Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal recessive Charcot-Marie-Tooth disease type 2B1","type":"exact"},{"name":"autosomal recessive axonal CMT4C1","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2B1","type":"exact"}],"termid":"MONDO:0011569","xrefs":{"Monarch":{"xref_id":"0011569"}}}


id: PBO:0001939
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip Elongation Aberrant","termid":"PBO:0001939"}


id: PBO:0043681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORO7-PAM16 readthrough","termid":"PBO:0043681"}


id: MONDO:0005612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian leiomyosarcoma (obsolete MONDO:0005612)","termid":"MONDO:0005612","xrefs":{"Monarch":{"xref_id":"0005612"}}}


id: PBO:0066948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 250","termid":"PBO:0066948"}


id: PBO:0038454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoadipate-semialdehyde synthase","termid":"PBO:0038454"}


id: GO:0048774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a cyanophore cell. Cyanophores are pigment cells derived from the neural crest. They contain a blue pigment of unknown chemical composition. The pigment is stored in fibrous organelles termed cyanosomes.","definition_xrefs":["GOC:mh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanophore differentiation","synonyms":[{"name":"cyanophore cell differentiation","type":"exact"}],"termid":"GO:0048774"}


id: PBO:0029898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nuclear_periphery","termid":"PBO:0029898"}


id: PATO:0000816
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000816 relative odor acuity value (obsolete PATO:0000816)","termid":"PATO:0000816"}


id: GO:0018749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3,5-dichlorophenylurea)acetate + OH- = 3,5-dichloroaniline + N-carboxyglycine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete (3,5-dichlorophenylurea)acetate amidohydrolase activity (obsolete GO:0018749)","termid":"GO:0018749"}


id: GO:0038002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of information from one cell to another, where an endocrine hormone is transported from the signal-producing cell to the receiving cell via the circulatory system (via blood, lymph or cerebrospinal fluid). The signaling cell and the receiving cell are often distant to each other.","definition_xrefs":["ISBN:0199264678","GOC:mtg_signaling_feb11","ISBN:3527303782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endocrine signaling","synonyms":[{"name":"endocrine signalling","type":"exact"}],"termid":"GO:0038002"}


id: FYPO:0002128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002126"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to plasma membrane, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization in plasma membrane, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell membrane, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"protein localization to plasma membrane abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0002128"}


id: GO:0042057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to transforming growth factor beta receptor and anchors it to a particular subcellular location.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor anchoring activity (obsolete GO:0042057)","synonyms":[{"name":"TGF-beta receptor anchoring activity","type":"exact"},{"name":"TGFbeta receptor anchoring activity","type":"exact"},{"name":"transforming growth factor beta receptor anchor activity","type":"exact"},{"name":"transforming growth factor beta receptor anchoring activity","type":"exact"}],"termid":"GO:0042057"}


id: PR:Q10113
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mal3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule integrity protein mal3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.15","synonyms":[{"name":"Spom972h-mal3","type":"exact"}],"termid":"PR:Q10113"}


id: FYPO:0004061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UV-damage excision repair occurs to a lower extent than normal during G1 phase of the mitotic cell cycle. UV-damage excision repair is a DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site, and that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["GO:0070914","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased UV-damage excision repair","termid":"FYPO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"decreased UV-damage excision repair during mitotic G1 phase","synonyms":[{"name":"decreased UV-damage excision repair during G1 phase of mitotic cell cycle","type":"related"},{"name":"decreased UV-damage excision repair during mitotic G1 during vegetative growth","type":"exact"},{"name":"reduced UV-damage excision repair during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004061"}


id: GO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process modulates the frequency, rate or extent of turgor formation in the symbiont appressorium.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of turgor in appressorium (obsolete GO:0075040)","synonyms":[{"name":"regulation of turgor formation in appressorium","type":"related"}],"termid":"GO:0075040"}


id: PBO:0053709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 917","termid":"PBO:0053709"}


id: PBO:0066236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 43 pseudogene 1","termid":"PBO:0066236"}


id: PBO:0066693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of microtubule dynamics 3","termid":"PBO:0066693"}


id: MONDO:1012043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar abiotrophy, non-human animal","termid":"MONDO:1011834"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar abiotrophy, sheep","secondary_identifiers":["OMIA:000175-9940"],"termid":"MONDO:1012043","xrefs":{"Monarch":{"xref_id":"1012043"}}}


id: GO:0031627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which linear telomeric DNA is remodeled into duplex loops, by the invasion of a 3' single-stranded overhang into the duplex region.","definition_xrefs":["GOC:vw","PMID:10338214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"telomeric loop formation","synonyms":[{"name":"T loop biosynthesis","type":"exact"},{"name":"T loop formation","type":"exact"},{"name":"t-loop biosynthesis","type":"exact"},{"name":"t-loop formation","type":"exact"}],"termid":"GO:0031627"}


id: PR:O74864
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S acidic ribosomal protein P0 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04894","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P0 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.14c","secondary_identifiers":["UniProtKB:O74864"],"synonyms":[{"name":"Spom972h-RPLP0","type":"exact"}],"termid":"PR:O74864"}


id: GO:0072070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the loop of Henle over time, from its formation to the mature structure. The loop of Henle is a nephron tubule that connects the proximal convoluted tubule to the distal convoluted tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"loop of Henle development","secondary_identifiers":["GO:0072018"],"synonyms":[{"name":"intermediate tubule development","type":"exact"}],"termid":"GO:0072070"}


id: PBO:0043646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 6","termid":"PBO:0043646"}


id: MONDO:1011894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative encephalopathy, non-human animal","secondary_identifiers":["OMIA:002055"],"termid":"MONDO:1011894","xrefs":{"Monarch":{"xref_id":"1011894"}}}


id: GO:1902132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-lariciresinol.","definition_xrefs":["GOC:TermGenie","PMID:8910615","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"(+)-lariciresinol metabolic process","termid":"GO:1902130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"(+)-lariciresinol biosynthetic process","synonyms":[{"name":"(+)-lariciresinol anabolism","type":"exact"},{"name":"(+)-lariciresinol biosynthesis","type":"exact"},{"name":"(+)-lariciresinol formation","type":"exact"},{"name":"(+)-lariciresinol synthesis","type":"exact"}],"termid":"GO:1902132"}


id: PBO:0045600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 11 (pseudogene)","termid":"PBO:0045600"}


id: MONDO:0043512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalopathy resulting from trauma.","definition_xrefs":["NCIT:C35542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traumatic encephalopathy","secondary_identifiers":["SCTID:230282000","UMLS:C0236959","MEDGEN:536661","icd11.foundation:1673722101"],"synonyms":[{"name":"dementia due to head trauma","type":"narrow"},{"name":"post-traumatic brain syndrome","type":"narrow"},{"name":"post-traumatic dementia","type":"narrow"},{"name":"traumatic encephalopathy","type":"exact"}],"termid":"MONDO:0043512","xrefs":{"Monarch":{"xref_id":"0043512"}}}


id: GO:0060191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lipase activity, the hydrolysis of a lipid or phospholipid.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipase activity (obsolete GO:0060191)","termid":"GO:0060191"}


id: GO:0061345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via effectors other than beta-catenin and contributing to a cardioblast being committed to a cardiac muscle cell fate.","definition_xrefs":["PMID:16860783","GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"},{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway involved in heart development","termid":"GO:0061341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"planar cell polarity pathway involved in cardiac muscle cell fate commitment","termid":"GO:0061345"}


id: PBO:0080738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing E3 ubiquitin protein ligase 2","termid":"PBO:0080738"}


id: PBO:0078593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 6, Y-linked","termid":"PBO:0078593"}


id: PBO:0056212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B6B","termid":"PBO:0056212"}


id: PBO:0029561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cilofungin","termid":"PBO:0029561"}


id: PBO:0090321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6","termid":"PBO:0090321"}


id: MONDO:0015317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"infantile hemangioma of rare localization","termid":"MONDO:0016223"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngotracheal angioma","secondary_identifiers":["Orphanet:137935","UMLS:C3839574","MEDGEN:825419","NCIT:C99086","SCTID:703199001","GARD:19893","ICD9:228.09"],"termid":"MONDO:0015317","xrefs":{"Monarch":{"xref_id":"0015317"}}}


id: PBO:0050994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT122 pseudogene 1","termid":"PBO:0050994"}


id: PBO:0080289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 53 pseudogene","termid":"PBO:0080289"}


id: PBO:0049503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 10, pseudogene","termid":"PBO:0049503"}


id: PBO:0074020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 14","termid":"PBO:0074020"}


id: PBO:0061168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Leu (TAA) 6-1","termid":"PBO:0061168"}


id: GO:1900046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemostasis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"regulates","term_name":"hemostasis","termid":"GO:0007599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemostasis","termid":"GO:1900046"}


id: GO:0008109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R.","definition_xrefs":["EC:2.4.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.150-RXN","RHEA:54820"],"synonyms":[{"name":"N-acetylglucosaminyltransferase activity","type":"related"},{"name":"N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase activity","type":"related"},{"name":"UDP-GlcNAc:Gal-R, beta-D-6-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:beta-D-galactosyl-1,4-N-acetyl-D-glucosaminide beta-1,6-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"galbeta1->4GlcNAc-R beta1->6 N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-acetyllactosaminide beta1->6-acetylglucosaminyltransferase","type":"broad"}],"termid":"GO:0008109"}


id: _global:input_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of has input","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"participates_in","termid":"_global:participates_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"input_of","secondary_identifiers":["RO:0002352"],"termid":"_global:input_of"}


id: PBO:0029585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_catabolic_process_during_vegetative_growth","termid":"PBO:0029585"}


id: PBO:0001240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bos1 (predicted)","termid":"PBO:0001240"}


id: GO:0034233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cell wall chitin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell wall chitin catabolic process (obsolete GO:0034233)","synonyms":[{"name":"regulation of cell wall chitin breakdown","type":"exact"},{"name":"regulation of cell wall chitin catabolism","type":"exact"},{"name":"regulation of cell wall chitin degradation","type":"exact"}],"termid":"GO:0034233"}


id: PR:000027610
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of replication checkpoint protein 1 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated at least on the last Thr residue within the TQxSQx(6)TQ motif. Phosphorylated by Rad3 and Tel1. UniProtKB:Q9P7T4-1, Thr-645, MOD:00047.","definition_xrefs":["PMID:14585996","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediator of replication checkpoint protein 1","termid":"PR:000027605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of replication checkpoint protein 1 phosphorylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC694.06c","synonyms":[{"name":"Spom-mrc1/Phos:1","type":"exact"}],"termid":"PR:000027610"}


id: MONDO:0018784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pediatric multiple sclerosis (MS) is a rare multiple sclerosis variant characterized by the onset of multiple sclerosis (i.e. one or multiple episodes of clinical CNS symptoms consistent with acquired CNS demyelination, with radiologically proven dissemination of inflammatory lesions in space and time, following exclusion of other disorders) before the age of 18 years old. Pediatric MS patients present a predominantly relapsing-remitting course with first attack usually consisting of optic neuritis, transverse myelitis, acute disseminated encephalomyelitis and monofocal or polyfocal neurological deficits. A high burden of T2-hyperintense lesions on initial MRI, primarily of the supratentorial region and/or of the cervical spinal cord, has been reported.","definition_xrefs":["Orphanet:477738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple sclerosis","termid":"MONDO:0005301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559"],"is_obsolete":false,"name":"pediatric multiple sclerosis","secondary_identifiers":["GARD:10443","UMLS:C5568571","MEDGEN:1799994"],"synonyms":[{"name":"MS paediatric","type":"related"},{"name":"MS pediatric","type":"related"},{"name":"multiple sclerosis, paediatric","type":"related"},{"name":"multiple sclerosis, pediatric","type":"related"},{"name":"paediatric MS","type":"related"},{"name":"pediatric MS","type":"related"}],"termid":"MONDO:0018784","xrefs":{"Monarch":{"xref_id":"0018784"}}}


id: GO:0050483
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69690],"is_not":false,"summary":null,"term":"GO:0050483"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-IMP + H2O = inosine + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-nucleotidase activity","termid":"GO:0008253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"IMP 5'-nucleotidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:27718","MetaCyc:RXN-7607"],"synonyms":[{"name":"IMP 5' nucleotidase activity","type":"exact"},{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"related"}],"termid":"GO:0050483","terms_by_termid":{"GO:0050483":null}}


id: PBO:0049955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 1","termid":"PBO:0049955"}


id: GO:0002926
data:
  {"annotated_genes":["SJAG_00235","SJAG_00579","SJAG_04756","SJAG_01418","SJAG_04452","SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72087,79511,100333,109904,113715,118518],"is_not":false,"summary":null,"term":"GO:0002926"}]},"cv_name":"biological_process","definition":"The process whereby a wobble base uridine residue in a tRNA is modified to 5-methoxycarbonylmethyl-2-thiouridine.","definition_xrefs":["GOC:hjd","PMID:22768388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble uridine modification","termid":"GO:0002098"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00579":null,"SJAG_01418":null,"SJAG_03677":null,"SJAG_04452":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mcm5 modification","type":"exact"},{"name":"mcm5s2U34 biosynthesis","type":"exact"},{"name":"tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis","type":"exact"}],"termid":"GO:0002926","terms_by_termid":{"GO:0002926":null}}


id: GO:0043828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylaminomethyl-2-thiouridine + selenophosphate = 5-methylaminomethyl-2-selenouridine + phosphate (at the wobble position in tRNA).","definition_xrefs":["PMID:14594807","RHEA:42716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenotransferase activity","termid":"GO:0016785"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0140101","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tRNA 2-selenouridine synthase activity","secondary_identifiers":["MetaCyc:RXN0-2281","EC:2.9.1.3"],"termid":"GO:0043828"}


id: PBO:0030952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_centromere","termid":"PBO:0030952"}


id: PBO:0017005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu25","termid":"PBO:0017005"}


id: PBO:0066179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 4B","termid":"PBO:0066179"}


id: GO:0097246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a catechin, a polyphenolic antioxidant plant metabolite with a flavonoid or flavan-3-ol structure.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavanol binding","termid":"GO:0097245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"catechin binding","termid":"GO:0097246"}


id: GO:1905662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of telomerase RNA reverse transcriptase activity.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GO_REF:0000059","GOC:nc","GOC:TermGenie","PMID:22633954"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of telomerase RNA reverse transcriptase activity (obsolete GO:1905662)","synonyms":[{"name":"down regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"down regulation of telomerase, catalyst","type":"exact"},{"name":"down-regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"down-regulation of telomerase, catalyst","type":"exact"},{"name":"downregulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"downregulation of telomerase, catalyst","type":"exact"},{"name":"inhibition of telomerase RNA reverse transcriptase activity","type":"narrow"},{"name":"inhibition of telomerase, catalyst","type":"narrow"},{"name":"negative regulation of telomerase, catalyst","type":"exact"}],"termid":"GO:1905662"}


id: PBO:0079572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 4","termid":"PBO:0079572"}


id: MONDO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metaphyseal dysplasia (obsolete MONDO:0000841)","termid":"MONDO:0000841","xrefs":{"Monarch":{"xref_id":"0000841"}}}


id: GO:0140591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which large macromolecular complexes are budded through the inner nuclear membrane, into the perinuclear space, thus acquiring a membrane envelope. The enveloped particle fuses with the outer nuclear membrane and is released into the cytoplasm.","definition_xrefs":["PMID:27236823","PMID:32503943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear export","termid":"GO:0051168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"nuclear envelope budding","termid":"GO:0140591"}


id: GO:0015932
data:
  {"annotated_genes":["SJAG_00339","SJAG_03334","SJAG_04697","SJAG_01177","SJAG_04328","SJAG_00154","SJAG_04162","SJAG_03503","SJAG_00434","SJAG_00612","SJAG_04325","SJAG_01960","SJAG_00760","SJAG_03452","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[101116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[59578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[58920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[102608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[70280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[73655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015230"},{"annotations":[93110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[71548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[75330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[75437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"},{"annotations":[79000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015218"},{"annotations":[74671,75701,88129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[75702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[77421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[77422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of nucleobases, nucleosides, nucleotides and nucleic acids from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"nucleobase-containing compound transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity","type":"related"}],"termid":"GO:0015932","terms_by_termid":{"GO:0001409":null,"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0008521":null,"GO:0015218":null,"GO:0015228":null,"GO:0015230":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: PBO:0005354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 7, Pre10 (predicted)","termid":"PBO:0005354"}


id: PBO:0084065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (RhoGAP) for Rho3p and Rho4p; involved in repolarization of actin cytoskeleton during adaptation to heat shock stress; phosphorylated by Pkc1p","termid":"PBO:0084065"}


id: MONDO:0012318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 1","secondary_identifiers":["UMLS:C1864995","MEDGEN:351271","OMIM:609630"],"synonyms":[{"name":"Clls1","type":"related"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 1","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0012318","xrefs":{"Monarch":{"xref_id":"0012318"}}}


id: GO:0061068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the urethra over time from its initial formation to the mature structure. The urethra is a renal system organ that carries urine from the bladder to outside the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urethra development","termid":"GO:0061068"}


id: PBO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head domain","termid":"PBO:0002156"}


id: PBO:0091309
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Starvation induced ArresT","termid":"PBO:0091309"}


id: MONDO:0018771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A congenital heart malformation that involves the interventricular septum.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital anomaly of ventricular septum (obsolete MONDO:0018771)","secondary_identifiers":["Orphanet:474347"],"synonyms":[{"name":"congenital anomaly of interventricular communication","type":"exact"},{"name":"congenital heart malformation of interventricular septum","type":"exact"},{"name":"congenital ventricular septal anomaly","type":"exact"},{"name":"interventricular septum congenital heart malformation","type":"exact"},{"name":"rare congenital anomaly of ventricular septum","type":"related"}],"termid":"MONDO:0018771","xrefs":{"Monarch":{"xref_id":"0018771"}}}


id: PBO:0048588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 2","termid":"PBO:0048588"}


id: MOD:00546
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two (18)O atom for the two (16)O atoms of an alpha-carboxyl (1-carboxyl) group.","definition_xrefs":["Unimod:193","OMSSA:88","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O disubstituted residue","termid":"MOD:00847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O label at both C-terminal oxygens","synonyms":[{"name":"Label:18O(2)","type":"related"},{"name":"O18 label at both C-terminal oxygens","type":"related"},{"name":"ctermpepdio18","type":"exact"}],"termid":"MOD:00546"}


id: PBO:0045706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 4","termid":"PBO:0045706"}


id: PBO:0042306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule","termid":"PBO:0042306"}


id: GO:0031411
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular non-membrane-bounded organelle; a hollow structure made of protein, which usually has the form of a cylindrical tube closed by conical end caps. By regulating their relative gas vesicle content, aquatic microbes are able to perform vertical migrations.","definition_xrefs":["PMID:22147705","PMID:8177173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gas vesicle","synonyms":[{"name":"gas vacuole","type":"related"}],"termid":"GO:0031411"}


id: PBO:0040938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 9","termid":"PBO:0040938"}


id: PR:Q9C1X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-2-hydroxyglutarate dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02620","PRO:DNx","PANTHER:PTHR11748:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-lactate dehydrogenase C713.03, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.03","secondary_identifiers":["UniProtKB:Q9C1X2"],"synonyms":[{"name":"Spom972h-D2HGDH","type":"exact"}],"termid":"PR:Q9C1X2"}


id: PBO:0049596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 14","termid":"PBO:0049596"}


id: PBO:0089993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ste13/Dhh1","termid":"PBO:0089993"}


id: MONDO:0003439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exophytic glandular neoplasm of the bladder, morphologically similar to its intestinal counterpart. It often coexists with in situ or infiltrating bladder adenocarcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"urinary bladder neoplasm","termid":"MONDO:0004987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary bladder villous adenoma","secondary_identifiers":["NCIT:C7414","UMLS:C1336893","MEDGEN:234977","DOID:5427"],"synonyms":[{"name":"bladder villous adenoma","type":"exact"},{"name":"urinary bladder villous adenoma","type":"exact"},{"name":"villous adenoma of the urinary bladder","type":"exact"},{"name":"villous adenoma of urinary bladder","type":"exact"}],"termid":"MONDO:0003439","xrefs":{"Monarch":{"xref_id":"0003439"}}}


id: PR:P78797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC70.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized proline-rich protein C70.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.10","synonyms":[{"name":"Spom972h-SPCC70.10","type":"exact"}],"termid":"PR:P78797"}


id: GO:0044084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any small opening in a host cell membrane that allows the passage of gases and/or liquids, composed of host proteins.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell membrane pore complex","synonyms":[{"name":"pore complex in host cell membrane","type":"exact"}],"termid":"GO:0044084"}


id: PBO:0117005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL2RB and C1QTNF6 antisense RNA 1","termid":"PBO:0117005"}


id: MONDO:0017805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"inherited hypertrophic pyloric stenosis","termid":"MONDO:0100239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intellectual disability-hypotonia-brachycephaly-pyloric stenosis-cryptorchidism syndrome","secondary_identifiers":["UMLS:C4751073","MEDGEN:1655593","GARD:21379","Orphanet:314575"],"termid":"MONDO:0017805","xrefs":{"Monarch":{"xref_id":"0017805"}}}


id: GO:0017063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 2-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylserine-specific phospholipase A1 activity (obsolete GO:0017063)","synonyms":[{"name":"phosphatidylserine-specific phospholipase A1 activity","type":"exact"}],"termid":"GO:0017063"}


id: MONDO:0030020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 44","secondary_identifiers":["DOID:0070424","UMLS:C5394293","MEDGEN:1718899","OMIM:618855"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 44","type":"exact"},{"name":"COXPD44","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 44","type":"exact"}],"termid":"MONDO:0030020","xrefs":{"Monarch":{"xref_id":"0030020"}}}


id: PBO:0080393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26A pseudogene 1","termid":"PBO:0080393"}


id: PBO:0040198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 11","termid":"PBO:0040198"}


id: GO:1900185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xanthone-containing compound biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"positively_regulates","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of xanthone-containing compound biosynthetic process","synonyms":[{"name":"activation of xanthone biosynthesis","type":"narrow"},{"name":"activation of xanthone biosynthetic process","type":"narrow"},{"name":"activation of xanthone-containing compound anabolism","type":"exact"},{"name":"activation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"activation of xanthone-containing compound biosynthetic process","type":"narrow"},{"name":"activation of xanthone-containing compound formation","type":"exact"},{"name":"activation of xanthone-containing compound synthesis","type":"exact"},{"name":"positive regulation of xanthone biosynthesis","type":"narrow"},{"name":"positive regulation of xanthone biosynthetic process","type":"narrow"},{"name":"positive regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"positive regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"positive regulation of xanthone-containing compound formation","type":"exact"},{"name":"positive regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"up regulation of xanthone biosynthesis","type":"narrow"},{"name":"up regulation of xanthone biosynthetic process","type":"narrow"},{"name":"up regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"up regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"up regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"up regulation of xanthone-containing compound formation","type":"exact"},{"name":"up regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"up-regulation of xanthone biosynthesis","type":"narrow"},{"name":"up-regulation of xanthone biosynthetic process","type":"narrow"},{"name":"up-regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"up-regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"up-regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"up-regulation of xanthone-containing compound formation","type":"exact"},{"name":"up-regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"upregulation of xanthone biosynthesis","type":"narrow"},{"name":"upregulation of xanthone biosynthetic process","type":"narrow"},{"name":"upregulation of xanthone-containing compound anabolism","type":"exact"},{"name":"upregulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"upregulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"upregulation of xanthone-containing compound formation","type":"exact"},{"name":"upregulation of xanthone-containing compound synthesis","type":"exact"}],"termid":"GO:1900185"}


id: GO:0031317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of two membrane proteins and one extracytoplasmic solute receptor. Such transporters transport a variety of substrates without direct ATP power, instead using energy from ion gradients.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tripartite ATP-independent periplasmic transporter complex","synonyms":[{"name":"TRAP transporter complex","type":"exact"},{"name":"TRAP-T transporter complex","type":"exact"}],"termid":"GO:0031317"}


id: PBO:0059641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 7","termid":"PBO:0059641"}


id: FYPO:0003786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0003744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to centromere central core during vegetative growth","secondary_identifiers":["FYPO:0003765"],"synonyms":[{"name":"abolished protein localisation to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"protein localization to centromere central core abolished during vegetative growth","type":"exact"},{"name":"protein localization to chromatin at centromere central core abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003786"}


id: GO:0018795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-2-methyl-1,3-dicarbonate + H+ = CO2 + L-lactate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-2-methyl-1,3-dicarbonate decarboxylase activity (obsolete GO:0018795)","termid":"GO:0018795"}


id: PBO:0091495
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae HAL3","termid":"PBO:0091495"}


id: GO:2000357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell differentiation","termid":"GO:0051151"},{"relation_name":"is_a","term_name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"},{"relation_name":"negatively_regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of kidney smooth muscle cell differentiation","termid":"GO:2000357"}


id: PBO:0084782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial phenylalanyl-tRNA synthetase; active as a monomer, unlike the cytoplasmic subunit which is active as a dimer complexed to a beta subunit dimer; similar to the alpha subunit of E. coli phenylalanyl-tRNA synthetase","termid":"PBO:0084782"}


id: MONDO:0044332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"childhood-onset benign chorea with striatal involvement","secondary_identifiers":["MEDGEN:1798886","GARD:17906","Orphanet:494541","UMLS:C5567463"],"termid":"MONDO:0044332","xrefs":{"Monarch":{"xref_id":"0044332"}}}


id: GO:0032150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone, beginning with the conversion of chorismate to 4-hydroxybenzoate.","definition_xrefs":["GOC:mah","PMID:11583838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006744"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006744","GO:0008150"],"is_obsolete":false,"name":"ubiquinone biosynthetic process from chorismate","termid":"GO:0032150"}


id: PBO:0048367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase, spermatogenic","termid":"PBO:0048367"}


id: GO:0004208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage at the terminal bond of the motif: Asp-Xaa-Xaa-Asp-Xaa. Enzymes with this function are members of the peptidase family C14 and they appear to function in the inactivation of proteins involved in cellular repair and homeostasis during the effector stage of apoptosis.","definition_xrefs":["ISBN:0120793709"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-3 activity (obsolete GO:0004208)","synonyms":[{"name":"caspase-3 activity","type":"exact"}],"termid":"GO:0004208"}


id: PBO:0036283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate kinase Arg82 (predicted)","termid":"PBO:0036283"}


id: MONDO:0002070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of a defect (opening) in the septum that separates the two ventricles of the heart. It can be congenital or acquired.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart septal defect","termid":"MONDO:0002078"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"ventricular septal defect","secondary_identifiers":["Orphanet:1480","NCIT:C84506","ICD9:745.4","MEDGEN:42366","NANDO:2100087","DOID:1657","NANDO:2200270","HP:0001629","UMLS:C0018818","MESH:D006345","icd11.foundation:668140715","SCTID:30288003","OMIMPS:614429"],"synonyms":[{"name":"VSD","type":"exact"},{"name":"heart septal defects, ventricular","type":"related"},{"name":"interventricular communication","type":"exact"},{"name":"interventricular septal defect","type":"exact"},{"name":"ventricular septal abnormality","type":"exact"},{"name":"ventricular septal defect","type":"exact"},{"name":"ventricular septal defect (disease)","type":"exact"},{"name":"ventricular septal defects","type":"related"}],"termid":"MONDO:0002070","xrefs":{"Monarch":{"xref_id":"0002070"}}}


id: PBO:0045677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein 2 intermediate chain 1","termid":"PBO:0045677"}


id: PBO:0049030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 17","termid":"PBO:0049030"}


id: GO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to CORE element, a regulatory region composed of the transcription start site and binding sites for transcription factors of the RNA polymerase I transcription machinery in order to modulate transcription by RNA polymerase I.","definition_xrefs":["GOC:txnOH","PMID:12865296","PMID:14969726","PMID:8057832"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase I CORE element sequence-specific binding (obsolete GO:0001169)","synonyms":[{"name":"RNA polymerase I CORE element sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"RNA polymerase I core promoter sequence-specific DNA binding transcription factor","type":"exact"}],"termid":"GO:0001169"}


id: PBO:0031517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_binding","termid":"PBO:0031517"}


id: MONDO:0009182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa, Herlitz-type is a severe subtype of junctional epidermolysis bullosa (JEB) characterized by blisters and extensive erosions, localized to the skin and mucous membranes.","definition_xrefs":["Orphanet:79404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"junctional epidermolysis bullosa Herlitz type","secondary_identifiers":["OMIM:226700","UMLS:C0079683","MEDGEN:36328","DOID:0060737","SCTID:400140006","NANDO:2201378","NANDO:2200119","NANDO:1201065","GARD:2153"],"synonyms":[{"name":"Herlitz type epidermolysis bullosa junctionalis","type":"exact"},{"name":"Herlitz-Pearson type epidermolysis bullosa","type":"related"},{"name":"Herlitz-Pearson-type epidermolysis bullosa","type":"exact"},{"name":"JEB, generalised severe","type":"exact"},{"name":"JEB, generalized severe","type":"exact"},{"name":"JEB-H","type":"exact"},{"name":"JEB-Herlitz type","type":"exact"},{"name":"epidermolysis bullosa Junctionalis, Herlitz type","type":"related"},{"name":"epidermolysis bullosa letalis","type":"exact"},{"name":"epidermolysis bullosa, junctional, Herlitz type","type":"related"},{"name":"epidermolysis bullosa, junctional, Herlitz-Pearson type","type":"related"},{"name":"junctional epidermolysis bullosa generalisata gravis","type":"exact"},{"name":"junctional epidermolysis bullosa, Herlitz type","type":"related"},{"name":"junctional epidermolysis bullosa, Herlitz-Pearson type","type":"exact"},{"name":"junctional epidermolysis bullosa, generalised severe","type":"related"},{"name":"junctional epidermolysis bullosa, generalized severe","type":"related"}],"termid":"MONDO:0009182","xrefs":{"Monarch":{"xref_id":"0009182"}}}


id: PBO:0025457
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"changed from ncRNA to protein 20151128","termid":"PBO:0025457"}


id: PBO:0068500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 86, pseudogene","termid":"PBO:0068500"}


id: PR:Q9P7B2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps802 gene.","definition_xrefs":["UniProtKB:Q9P7B2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S8-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.05","synonyms":[{"name":"Spom972h-rps802","type":"exact"}],"termid":"PR:Q9P7B2"}


id: GO:0023051
data:
  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id: GO:0140868
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + 15-cis-4,4'-diapophytoene + 3 FAD = 4,4'-diapolycopene + 3 FADH2. This reaction consists of three successive dehydrogenations that lead to the introduction of three double bonds into 4,4'-diapophytoene (dehydrosqualene), with 4,4'-diapophytofluene and 4,4'-diapo-zeta-carotene as intermediates, and 4,4'-diaponeurosporene (the major deep-yellow pigment in staphylococci strains) as the end product.","definition_xrefs":["PMID:15933032"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,4'-diapophytoene desaturase (4,4'-diapolycopene-forming) (obsolete GO:0140868)","synonyms":[{"name":"4,4'-diapophytoene desaturase activity","type":"broad"}],"termid":"GO:0140868"}


id: GO:1902024
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  {"annotated_genes":["SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"}]},"cv_name":"biological_process","definition":"The directed movement of a L-histidine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","PMID:22822152","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"},{"relation_name":"is_a","term_name":"histidine transport","termid":"GO:0015817"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-histidine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902024","terms_by_termid":{"GO:0089708":null,"GO:0090513":null}}


id: PBO:0091900
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf5","termid":"PBO:0091900"}


id: FYPO:0005885
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to myxothiazol. Cells stop growing (and may die) at a concentration of myxothiazol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to myxothiazol","synonyms":[{"name":"hypersensitive to myxothiazol","type":"exact"},{"name":"sensitive to MXT","type":"exact"},{"name":"sensitive to myxothiazol during mitotic cell cycle","type":"related"},{"name":"sensitive to myxothiazol during vegetative growth","type":"exact"}],"termid":"FYPO:0005885"}


id: MONDO:0018258
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Angora hair nevus","secondary_identifiers":["MEDGEN:1667925","GARD:21590","Orphanet:370039","UMLS:C4751601"],"synonyms":[{"name":"Schauder syndrome","type":"exact"}],"termid":"MONDO:0018258","xrefs":{"Monarch":{"xref_id":"0018258"}}}


id: PBO:0081734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 665","termid":"PBO:0081734"}


id: PBO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.23","termid":"PBO:0001671"}


id: MONDO:0012112
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  {"annotated_genes":["SJAG_01665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86221],"is_not":false,"summary":null,"term":"MONDO:0012112"}]},"cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the MYL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:608758","UMLS:C1834460","MESH:C563865","DOID:0110316","MEDGEN:331754"],"synonyms":[{"name":"CMH10","type":"exact"},{"name":"MYL2 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 10","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, type 10","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 10","type":"exact"},{"name":"cardiomyopathy, hypertrophic, mid-left ventricular chamber type, 2","type":"related"},{"name":"hypertrophic cardiomyopathy 10","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in MYL2","type":"exact"},{"name":"hypertrophic cardiomyopathy type 10","type":"exact"}],"termid":"MONDO:0012112","terms_by_termid":{"MONDO:0012112":null},"xrefs":{"Monarch":{"xref_id":"0012112"}}}


id: MONDO:0019285
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A nail anomaly that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic nail anomaly (obsolete MONDO:0019285)","secondary_identifiers":["Orphanet:79370"],"synonyms":[{"name":"syndrome associated with nail anomaly","type":"exact"},{"name":"syndromic nail anomaly","type":"exact"}],"termid":"MONDO:0019285","xrefs":{"Monarch":{"xref_id":"0019285"}}}


id: MONDO:0016622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melhem-Fahl syndrome was described in two siblings born to consanguineous parents in 1985 and was characterized by the presence of 15 dorsal vertebrae and rib pairs. No other cases have been documented since the initial report.","definition_xrefs":["Orphanet:2482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Melhem-Fahl syndrome","secondary_identifiers":["UMLS:C2931453","GARD:3462","icd11.foundation:999539082","MEDGEN:444059","MESH:C537238","SCTID:732263008"],"synonyms":[{"name":"Melhem Fahl syndrome","type":"related"},{"name":"fifteen dorsal vertebrae and rib pairs","type":"related"}],"termid":"MONDO:0016622","xrefs":{"Monarch":{"xref_id":"0016622"}}}


id: MONDO:0020080
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histiocytic and dendritic cell tumor (obsolete MONDO:0020080)","termid":"MONDO:0020080","xrefs":{"Monarch":{"xref_id":"0020080"}}}


id: PATO:0001487
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A time quality inhering in a bearer by virtue of the bearer's growing old; aging.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescent","termid":"PATO:0001487"}


id: GO:0034912
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phthalate 3,4-cis-dihydrodiol + NAD+ = 3,4-dihydroxyphthalate + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r1445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phthalate 3,4-cis-dihydrodiol dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN5F9-56"],"termid":"GO:0034912"}


id: PBO:0060165
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 13 (pseudogene)","termid":"PBO:0060165"}


id: MONDO:0010937
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoproterenol-mediated vasodilatation","secondary_identifiers":["MEDGEN:331475","OMIM:600801","UMLS:C1833276"],"synonyms":[{"name":"isoproterenol-mediated vasodilatation","type":"exact"}],"termid":"MONDO:0010937","xrefs":{"Monarch":{"xref_id":"0010937"}}}


id: GO:0010858
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of a calcium-dependent protein kinase, an enzyme which phosphorylates a protein in a calcium-dependent manner.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent protein kinase regulator activity","termid":"GO:0010858"}


id: PBO:0041701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CALHM6 antisense RNA 1","termid":"PBO:0041701"}


id: PBO:0079049
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 5-1","termid":"PBO:0079049"}


id: GO:0034074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidosqualene = marneral.","definition_xrefs":["PMID:18033581","PMID:16425307","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"marneral synthase activity","secondary_identifiers":["MetaCyc:RXN-9664","RHEA:31875"],"termid":"GO:0034074"}


id: PBO:0073023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCP2 sterol binding domain containing 1","termid":"PBO:0073023"}


id: MONDO:0007000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease caused by infection with Treponema.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial sexually transmitted disease","termid":"MONDO:0005323"},{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"},{"relation_name":"is_a","term_name":"spirochaetales infections","termid":"MONDO:0021839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Treponema infectious disease","secondary_identifiers":["EFO:1001217","MESH:D014211","NCIT:C85197"],"synonyms":[{"name":"Bejels","type":"narrow"},{"name":"Treponema caused disease or disorder","type":"exact"},{"name":"Treponema disease or disorder","type":"exact"},{"name":"Treponemal infection","type":"related"},{"name":"bejel","type":"narrow"},{"name":"infection, Treponemal","type":"related"},{"name":"infections, Treponemal","type":"related"}],"termid":"MONDO:0007000","xrefs":{"Monarch":{"xref_id":"0007000"}}}


id: PBO:0075943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 2","termid":"PBO:0075943"}


id: PR:Q9Y7J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp5 gene.","definition_xrefs":["UniProtKB:Q9Y7J9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.02","synonyms":[{"name":"Spom972h-mcp5","type":"exact"},{"name":"meiotically up-regulated gene 21 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear migration protein num1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7J9"}


id: FYPO:0002284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, does not occur during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein tyrosine phosphorylation during cellular response to hydrogen peroxide (obsolete FYPO:0002284)","synonyms":[{"name":"abolished protein tyrosine phosphorylation during cellular response to H2O2","type":"exact"},{"name":"abolished protein tyrosine phosphorylation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein tyrosine phosphorylation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"protein tyrosine phosphorylation abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002284"}


id: PBO:0034170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_transport_across","termid":"PBO:0034170"}


id: PBO:0067087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 123, pseudogene","termid":"PBO:0067087"}


id: PBO:0064334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 4","termid":"PBO:0064334"}


id: GO:0019538
data:
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id: PBO:0026846
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_binucleate_septated_cell","termid":"PBO:0026846"}


id: PBO:0075614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted phosphoprotein 2","termid":"PBO:0075614"}


id: PBO:0062420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 62 pseudogene","termid":"PBO:0062420"}


id: PBO:0012850
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial nephritis, karyomegalic","termid":"PBO:0012850"}


id: PBO:0045995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 2B","termid":"PBO:0045995"}


id: PBO:0065869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB26, member RAS oncogene family","termid":"PBO:0065869"}


id: GO:0140080
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of an AP site 3' and 5' of the baseless site, generating a 3'-phosphate and a 5'-OH.","definition_xrefs":["PMID:2519777"],"gene_count":0,"genotype_count":0,"name":"obsolete class III/IV DNA-(apurinic or apyrimidinic site) endonuclease activity (obsolete GO:0140080)","secondary_identifiers":["Wikipedia:AP_endonuclease"],"synonyms":[{"name":"endonuclease III","type":"related"},{"name":"endonuclease IV","type":"related"}],"termid":"GO:0140080"}


id: GO:0019927
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to tryptophyl quinone to form 4'-(S-L-cysteinyl)-L-tryptophyl quinone, a cofactor found at the active site of amine dehydrogenase.","definition_xrefs":["PMID:11555656","PMID:11717396","PDB:1JJU","RESID:AA0313"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone (obsolete GO:0019927)","termid":"GO:0019927"}


id: PBO:0061545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5', 3'-nucleotidase, cytosolic","termid":"PBO:0061545"}


id: PBO:0086650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole","termid":"PBO:0086650"}


id: PBO:0050139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 49","termid":"PBO:0050139"}


id: GO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, alpha-beta regulatory T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"},{"relation_name":"is_a","term_name":"regulatory T cell differentiation","termid":"GO:0045066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta regulatory T cell differentiation","synonyms":[{"name":"CD8-positive, alpha-beta regulatory T cell development","type":"related"},{"name":"CD8-positive, alpha-beta regulatory T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta regulatory T-cell differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta regulatory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002307"}


id: GO:0021681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cerebellar granule layer over time, from its formation to the mature structure. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["GOC:dph","GOC:dgh","ISBN:0838580343","GO_REF:0000021","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebellar cortex development","termid":"GO:0021695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer development","termid":"GO:0021681"}


id: PBO:0060993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal hypoxia inducible, placenta associated","termid":"PBO:0060993"}


id: PBO:0064473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 4, accessory subunit","termid":"PBO:0064473"}


id: GO:0006792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sulfur utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"sulfur utilization","termid":"GO:0006791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sulfur utilization","synonyms":[{"name":"regulation of sulphur utilization","type":"exact"}],"termid":"GO:0006792"}


id: PBO:0060577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 13, pseudogene","termid":"PBO:0060577"}


id: GO:0061440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the kidney over time, from its formation to the mature structure.","definition_xrefs":["PMID:11891195","GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system vasculature development","termid":"GO:0061437"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney vasculature development","termid":"GO:0061440"}


id: FYPO:0000069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of thiabendazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to thiabendazole","synonyms":[{"name":"resistance to TBZ","type":"exact"},{"name":"resistance to thiabendazole during mitotic cell cycle","type":"related"},{"name":"resistance to thiabendazole during vegetative growth","type":"exact"},{"name":"resistant to TBZ","type":"exact"},{"name":"resistant to thiabendazole","type":"exact"}],"termid":"FYPO:0000069"}


id: PBO:0072637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1 pseudogene 3","termid":"PBO:0072637"}


id: GO:1904063
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id: FYPO:0003593
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is abolished.","definition_xrefs":["GO:0031145","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"decreased anaphase-promoting complex-dependent protein catabolic process","termid":"FYPO:0003585"},{"relation_name":"is_a","term_name":"abolished proteolysis during vegetative growth","termid":"FYPO:0005377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"abolished anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"abolished anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"abolished anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"abolished anaphase-promoting complex-dependent protein degradation","type":"exact"},{"name":"anaphase-promoting complex-dependent protein catabolic process abolished","type":"exact"}],"termid":"FYPO:0003593"}


id: PBO:0026694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caesium","termid":"PBO:0026694"}


id: GO:0046696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that consists of at least three proteins, CD14, TLR4, and MD-2, each of which is glycosylated and which functions as a lipopolysaccharide (LPS) receptor that primes the innate immune response against bacterial pathogens.","definition_xrefs":["PMID:9665271","PMID:11706042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"lipopolysaccharide receptor complex","synonyms":[{"name":"LPS receptor complex","type":"exact"}],"termid":"GO:0046696"}


id: GO:0052754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + factor gamma-F420-2 + H+ = coenzyme F390-G + diphosphate.","definition_xrefs":["MetaCyc:RXN-18273","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"GTP:coenzyme F420 guanyltransferase activity","synonyms":[{"name":"GTP:coenzyme F420 guanylyltransferase activity","type":"exact"},{"name":"coenzyme F390-G synthetase activity","type":"exact"}],"termid":"GO:0052754"}


id: MONDO:0017635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete parkinsonian syndrome due to neurodegenerative disease (obsolete MONDO:0017635)","secondary_identifiers":["Orphanet:306666"],"termid":"MONDO:0017635","xrefs":{"Monarch":{"xref_id":"0017635"}}}


id: PBO:0038895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRA1 antisense RNA 1","termid":"PBO:0038895"}


id: PBO:0058993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTOR associated protein, LST8 homolog","termid":"PBO:0058993"}


id: GO:0046547
data:
  {"annotated_genes":["SJAG_02973"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94443],"is_not":false,"summary":null,"term":"GO:0046547"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + trans-aconitate = (E)-2-(methoxycarbonylmethyl)but-2-enedioate + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:22200","EC:2.1.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"trans-aconitate 3-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R05764","MetaCyc:2.1.1.145-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:(E)-prop-1-ene-1,2,3-tricarboxylate 3'-O-methyltransferase activity","type":"related"}],"termid":"GO:0046547","terms_by_termid":{"GO:0046547":null}}


id: PBO:0053784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1035","termid":"PBO:0053784"}


id: PBO:0052037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumping translocation breakpoint pseudogene 1","termid":"PBO:0052037"}


id: PBO:0089843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane alkaline phosphatase","termid":"PBO:0089843"}


id: GO:0018511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2,3-dihydroxy-2,3-dihydro-p-cumate + NAD+ = 2,3-dihydroxy-p-cumate + H+ + NADH.","definition_xrefs":["RHEA:23772","EC:1.3.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-665","UM-BBD_reactionID:r0396","KEGG_REACTION:R05240"],"synonyms":[{"name":"cis-2,3-dihydroxy-2,3-dihydro-p-cumate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018511"}


id: PBO:0055476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2909","termid":"PBO:0055476"}


id: PBO:0086377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATPase of the AAA family; interacts with the Sin1p transcriptional repressor in the two-hybrid system","termid":"PBO:0086377"}


id: PBO:0116983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMO1 antisense RNA 1","termid":"PBO:0116983"}


id: PBO:0053487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 462","termid":"PBO:0053487"}


id: PBO:0075411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 7","termid":"PBO:0075411"}


id: PBO:0085419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; exports copper; has broad substrate specificity and can transport many mono- and divalent cations; transports a variety of drugs and is required for resistance to quinidine, barban, cisplatin, and bleomycin; contributes to potassium homeostasis; expression is regulated by copper","termid":"PBO:0085419"}


id: PBO:0083476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SSH4","termid":"PBO:0083476"}


id: PBO:0084061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) for yeast Rab family member Ypt6p; involved in vesicle mediated protein transport","termid":"PBO:0084061"}


id: PATO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001042 absolute amplitude (obsolete PATO:0001042)","termid":"PATO:0001042"}


id: MONDO:0850160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-lymphoblastic leukemia/lymphoma that is characterized by the presence of lymphoblasts that carry a translocation between the IL3 gene on chromosome 5 and the IGH locus on chromosome 14, (q31.1;q32.3).","definition_xrefs":["DOID:0080648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with IL3-IGH","termid":"MONDO:0850160","xrefs":{"Monarch":{"xref_id":"0850160"}}}


id: GO:2000154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of flagellar cell motility.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of flagellar cell motility (obsolete GO:2000154)","synonyms":[{"name":"negative regulation of flagellar cell motility","type":"exact"}],"termid":"GO:2000154"}


id: SO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes for 2S ribosomal RNA, which functions as a component of the large subunit of the ribosome in Drosophila and at least some other Diptera.","definition_xrefs":["PMID:768488","PMID:10788608","PMID:4847940","PMID:407103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_2S_gene","synonyms":[{"name":"2S rRNA gene","type":"exact"},{"name":"rRNA 2S gene","type":"exact"}],"termid":"SO:0002336"}


id: PBO:0067402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 509, pseudogene","termid":"PBO:0067402"}


id: GO:1901767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbapenem.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:9402024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"carbapenem metabolic process","synonyms":[{"name":"carbapenem metabolism","type":"exact"}],"termid":"GO:1901767"}


id: GO:0050759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme thymidylate synthase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of thymidylate synthase biosynthetic process (obsolete GO:0050759)","synonyms":[{"name":"activation of thymidylate synthase biosynthetic process","type":"narrow"},{"name":"positive regulation of thymidylate synthase anabolism","type":"exact"},{"name":"positive regulation of thymidylate synthase biosynthesis","type":"exact"},{"name":"positive regulation of thymidylate synthase formation","type":"exact"},{"name":"positive regulation of thymidylate synthase synthesis","type":"exact"},{"name":"stimulation of thymidylate synthase biosynthetic process","type":"narrow"},{"name":"up regulation of thymidylate synthase biosynthetic process","type":"exact"},{"name":"up-regulation of thymidylate synthase biosynthetic process","type":"exact"},{"name":"upregulation of thymidylate synthase biosynthetic process","type":"exact"}],"termid":"GO:0050759"}


id: PBO:0044335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 18","termid":"PBO:0044335"}


id: MONDO:0013231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the LRAT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Leber congenital amaurosis 14","secondary_identifiers":["ICD10CM:H35.5","OMIM:613341","UMLS:C2750063","GARD:10883","DOID:0110188","MEDGEN:442375","MESH:C567636"],"synonyms":[{"name":"LCA14","type":"exact"},{"name":"LRAT Leber congenital amaurosis","type":"exact"},{"name":"Leber congenital amaurosis 14","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in LRAT","type":"exact"},{"name":"Leber congenital amaurosis type 14","type":"exact"},{"name":"retinal dystrophy, early-onset Severe, LRAT-related","type":"related"},{"name":"retinal dystrophy, early-onset severe","type":"exact"},{"name":"retinitis pigmentosa, juvenile","type":"related"},{"name":"retinitis pigmentosa, juvenile, LRAT-related","type":"related"}],"termid":"MONDO:0013231","xrefs":{"Monarch":{"xref_id":"0013231"}}}


id: PBO:0050572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HR upstream open reading frame","termid":"PBO:0050572"}


id: PBO:0064622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU6F2 antisense RNA 2","termid":"PBO:0064622"}


id: GO:0070547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an amino group from L-tyrosine to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete L-tyrosine aminotransferase activity (obsolete GO:0070547)","termid":"GO:0070547"}


id: GO:0051769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric-oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nitric-oxide synthase biosynthetic process (obsolete GO:0051769)","synonyms":[{"name":"regulation of NO synthase biosynthesis","type":"exact"},{"name":"regulation of NO synthase biosynthetic process","type":"exact"},{"name":"regulation of NOS biosynthesis","type":"exact"},{"name":"regulation of NOS biosynthetic process","type":"exact"},{"name":"regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"}],"termid":"GO:0051769"}


id: PBO:0042459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 123","termid":"PBO:0042459"}


id: PBO:0113190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysolipid acyltransferase; involved in the synthesis of phosphatidic acid from 1-acyl-2-hydroxy-sn-glycero-3-phosphate using oleoyl-CoA as acyl donor and in phospholipid remodeling, incorporating palmitic acid into the sn-1 position of phosphatidylserine and phosphatidylethanolamine; localizes to ER membranes associated with mitochondria (MAMs); contains three predicted transmembrane domains; similar to C. elegans F55A11.5 and maize 1-acyl-glycerol-3-phosphate acyltransferase","termid":"PBO:0113190"}


id: GO:0042940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the D-enantiomer of an amino acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"D-amino acid transport","termid":"GO:0042940"}


id: PBO:0018187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 beta subunit, guanyl-nucleotide exchange factor (eEF1B)","termid":"PBO:0018187"}


id: GO:0017098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sulfonylurea receptor, a regulatory subunit of the ATP-sensitive potassium ion channel.","definition_xrefs":["GOC:ceb","PMID:11938023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"sulfonylurea receptor binding","synonyms":[{"name":"sulfonylurea receptor ligand","type":"narrow"},{"name":"sulphonylurea receptor binding","type":"exact"}],"termid":"GO:0017098"}


id: GO:1905801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["PMID:27930654","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of intraciliary retrograde transport","termid":"GO:1905799"},{"relation_name":"positively_regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of intraciliary retrograde transport","synonyms":[{"name":"activation of intraciliary retrograde transport","type":"narrow"},{"name":"activation of intraflagellar retrograde transport","type":"narrow"},{"name":"positive regulation of intraflagellar retrograde transport","type":"exact"},{"name":"up regulation of intraciliary retrograde transport","type":"exact"},{"name":"up regulation of intraflagellar retrograde transport","type":"exact"},{"name":"up-regulation of intraciliary retrograde transport","type":"exact"},{"name":"up-regulation of intraflagellar retrograde transport","type":"exact"},{"name":"upregulation of intraciliary retrograde transport","type":"exact"},{"name":"upregulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905801"}


id: MONDO:1011009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Horner syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Horner syndrome, non-human animal","termid":"MONDO:1010240"},{"relation_name":"is_a","term_name":"peripheral neuropathy, dog","termid":"MONDO:1011007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Horner syndrome, dog","secondary_identifiers":["OMIA:001197-9615"],"termid":"MONDO:1011009","xrefs":{"Monarch":{"xref_id":"1011009"}}}


id: GO:0032871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of karyogamy, the creation of a single nucleus from multiple nuclei as a result of membrane fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleus organization","termid":"GO:1903353"},{"relation_name":"regulates","term_name":"karyogamy","termid":"GO:0000741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of karyogamy","termid":"GO:0032871"}


id: PATO:0000719
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a bearer or a population by virtue of the bearer's ability to survive or the long term survival ability of a given population.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viable","termid":"PATO:0000719"}


id: PBO:0113245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that binds the rDNA replication fork barrier site; required for replication fork blocking and recombinational hotspot activity that results in concerted evolution of the rDNA, termed homogenization; role in recruitment of condensin to the replication fork barrier (RFB), contributing to the faithful segregation of rDNA repeats; proposed role in recovery from low rDNA copy number; related to retroviral integrases","termid":"PBO:0113245"}


id: MONDO:0016906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 7q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the long arm (q) of chromosome 7. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 7q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 7","termid":"MONDO:0016872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 7","secondary_identifiers":["Orphanet:262056","GARD:3765","UMLS:C5679676","MEDGEN:1825969","icd11.foundation:1458081087","NCIT:C36408"],"synonyms":[{"name":"7q deletion","type":"related"},{"name":"7q monosomy","type":"related"},{"name":"del(7q)","type":"related"},{"name":"deletion 7q","type":"related"},{"name":"loss of chromosome 7q","type":"related"},{"name":"monosomy 7q","type":"related"},{"name":"partial deletion of chromosome 7q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 7","type":"exact"},{"name":"partial monosomy 7q","type":"related"},{"name":"partial monosomy of chromosome 7q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 7","type":"exact"}],"termid":"MONDO:0016906","xrefs":{"Monarch":{"xref_id":"0016906"}}}


id: GO:2000761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of N-terminal peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-lysine acetylation","termid":"GO:2000758"},{"relation_name":"is_a","term_name":"regulation of N-terminal peptidyl-lysine acetylation","termid":"GO:2000759"},{"relation_name":"positively_regulates","term_name":"N-terminal peptidyl-lysine acetylation","termid":"GO:0018076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"positive regulation of N-terminal peptidyl-lysine acetylation","termid":"GO:2000761"}


id: PBO:0038951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiponectin, C1Q and collagen domain containing","termid":"PBO:0038951"}


id: PBO:0072183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 10","termid":"PBO:0072183"}


id: PBO:0051431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-12","termid":"PBO:0051431"}


id: PBO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 33","termid":"PBO:0072156"}


id: MONDO:0019810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toxic epidermal necrolysis (TEN) is an acute and severe skin disease with clinical and histological features characterized by the destruction and detachment of the skin epithelium and mucous membranes.","definition_xrefs":["Orphanet:95455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"toxic epidermal necrolysis","secondary_identifiers":["SCTID:23067006","MedDRA:10044223","GARD:7743","ICD9:695.15","UMLS:C0014518","icd11.foundation:195467267","EFO:0004775","NCIT:C79777","NANDO:1200246","MEDGEN:4501","icd11.foundation:1575072695","NANDO:2201007"],"synonyms":[{"name":"Lyell syndrome","type":"narrow"},{"name":"Lyell's syndrome","type":"narrow"},{"name":"SJS-TEN","type":"exact"},{"name":"Stevens-Johnson syndrome/toxic epidermal necrolysis spectrum","type":"related"},{"name":"TEN","type":"exact"},{"name":"toxic epidermolysis","type":"exact"}],"termid":"MONDO:0019810","xrefs":{"Monarch":{"xref_id":"0019810"}}}


id: PBO:0028918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_glucose_starvation","termid":"PBO:0028918"}


id: PBO:0079045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-7","termid":"PBO:0079045"}


id: GO:0042040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of a metal into a metallo-molybdopterin complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metal incorporation into metallo-molybdopterin complex","termid":"GO:0042040"}


id: PBO:0057778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2467","termid":"PBO:0057778"}


id: PBO:0084965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosaminyltransferase; capable of modification of N-linked glycans in the Golgi apparatus","termid":"PBO:0084965"}


id: GO:0038107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a nodal protein binding of to an activin receptor on the surface of a target cell, which contributes to the establishment of an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["PMID:20413706","PMID:12857784","PMID:17287255","GOC:BHF","GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:0038107)","synonyms":[{"name":"nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter by nodal signaling pathway, involved in determination of left/right symmetry","type":"exact"}],"termid":"GO:0038107"}


id: PBO:0082310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartyl protease secreted to periplasmic space of mating type a cell; helps cells monitor availability of mating partners; cleaves and inactivates alpha factor allowing cells to recover from alpha-factor-induced cell cycle arrest","termid":"PBO:0082310"}


id: PBO:0089602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear import protein Nxt2","termid":"PBO:0089602"}


id: PBO:0027297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_septum","termid":"PBO:0027297"}


id: GO:0022836
data:
  {"annotated_genes":["SJAG_02322","SJAG_02019","SJAG_05229","SJAG_02532","SJAG_02877","SJAG_00048","SJAG_05342","SJAG_03895","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72816,79608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[99391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[103521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[95442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008381"},{"annotations":[92170,113669,92112,99392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"},{"annotations":[71489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens in response to a specific stimulus.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03895":null,"SJAG_04668":null,"SJAG_05229":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"gated channel activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0022836","terms_by_termid":{"GO:0005227":null,"GO:0008308":null,"GO:0008331":null,"GO:0008381":null,"GO:0015275":null,"GO:0140135":null}}


id: GO:0046721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of formic acid, HCOOH, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate transport","termid":"GO:0015724"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"formic acid secretion","synonyms":[{"name":"formate secretion","type":"exact"}],"termid":"GO:0046721"}


id: MONDO:0020255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculomotor palsy (obsolete MONDO:0020255)","termid":"MONDO:0020255","xrefs":{"Monarch":{"xref_id":"0020255"}}}


id: GO:0016984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 (2R)-3-phosphoglycerate + 2 H+ = CO2 + D-ribulose 1,5-bisphosphate + H2O.","definition_xrefs":["RHEA:23124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ribulose-bisphosphate carboxylase activity","secondary_identifiers":["MetaCyc:RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN","EC:4.1.1.39"],"synonyms":[{"name":"D-ribulose 1,5-diphosphate carboxylase activity","type":"exact"},{"name":"D-ribulose-1,5-bisphosphate carboxylase activity","type":"exact"},{"name":"RuBP carboxylase activity","type":"exact"},{"name":"RuBisCO activity","type":"exact"},{"name":"carboxydismutase activity","type":"related"},{"name":"diphosphoribulose carboxylase activity","type":"exact"},{"name":"ribulose 1,5-bisphosphate carboxylase activity","type":"exact"},{"name":"ribulose 1,5-bisphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose 1,5-diphosphate carboxylase activity","type":"exact"},{"name":"ribulose 1,5-diphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose bisphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose diphosphate carboxylase activity","type":"exact"},{"name":"ribulose diphosphate carboxylase/oxygenase activity","type":"exact"}],"termid":"GO:0016984"}


id: GO:0044803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane organization (obsolete GO:0044803)","termid":"GO:0044803"}


id: PBO:0049165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 7","termid":"PBO:0049165"}


id: PBO:0114635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 5, Rieske iron-sulfur protein, Rip1","termid":"PBO:0114635"}


id: PR:O14287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.01 gene.","definition_xrefs":["UniProtKB:O14287","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.01","synonyms":[{"name":"Spom972h-SPAC9E9.01","type":"exact"}],"termid":"PR:O14287"}


id: MONDO:0006671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus bacteroides.","definition_xrefs":["MESH:D001442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bacteroidaceae infectious disease","termid":"MONDO:0006705"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bacteroides infectious disease","secondary_identifiers":["EFO:1000832","ICD9:041.84","SCTID:2918000","UMLS:C0004669","MEDGEN:2164"],"synonyms":[{"name":"Bacteroides caused disease or disorder","type":"exact"},{"name":"Bacteroides disease or disorder","type":"exact"},{"name":"Bacteroides infection","type":"related"},{"name":"infection caused by Bacteroides","type":"related"},{"name":"infection due to Bacteroides","type":"exact"},{"name":"infection, Bacteroides","type":"related"},{"name":"infections, Bacteroides","type":"related"}],"termid":"MONDO:0006671","xrefs":{"Monarch":{"xref_id":"0006671"}}}


id: GO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"retinoic acid binding","termid":"GO:0001972"}


id: MONDO:0019739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic uremic syndrome, atypical, susceptibility to, 1","termid":"MONDO:0009335"},{"relation_name":"is_a","term_name":"atypical hemolytic-uremic syndrome","termid":"MONDO:0016244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with anti-factor H antibodies","secondary_identifiers":["GARD:16823","Orphanet:93581","UMLS:C5680286","MEDGEN:1825998"],"synonyms":[{"name":"D-HUS with anti-factor H antibodies","type":"exact"},{"name":"aHUS with anti-factor H antibodies","type":"exact"},{"name":"atypical HUS with anti-factor H antibodies","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with anti-factor H antibodies","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with anti-factor H antibodies","type":"exact"}],"termid":"MONDO:0019739","xrefs":{"Monarch":{"xref_id":"0019739"}}}


id: MOD:01513
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins that are nominally equal (sometimes called isobaric) at a resolution below 0.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by isobaric sets","termid":"MOD:00538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.1 Da","termid":"MOD:01513"}


id: GO:1903476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization to cell division site that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000060","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell division site involved in cytokinesis, actomyosin contractile ring assembly","termid":"GO:1902575"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0044085","GO:0008150","GO:0051179","GO:0000281","GO:0007049"],"is_obsolete":false,"name":"protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","synonyms":[{"name":"protein localisation to cell division site involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"protein localization to cell division site involved in actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localization to cell division site involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1903476"}


id: MONDO:0006034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the stomach and is characterized by the presence of malignant cells with glandular and squamous differentiation.","definition_xrefs":["NCIT:C5474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"},{"relation_name":"is_a","term_name":"gastric squamous cell carcinoma","termid":"MONDO:0006230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric adenosquamous carcinoma","secondary_identifiers":["ONCOTREE:STAS","UMLS:C1333761","DOID:5635","MEDGEN:272661","EFO:1000029"],"synonyms":[{"name":"STAS","type":"related"},{"name":"adenosquamous carcinoma of stomach","type":"exact"},{"name":"adenosquamous carcinoma of the stomach","type":"exact"},{"name":"gastric (stomach) adenosquamous cancer","type":"exact"},{"name":"gastric adenosquamous carcinoma","type":"exact"},{"name":"stomach adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0006034","xrefs":{"Monarch":{"xref_id":"0006034"}}}


id: GO:0048549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of pinocytosis. Pinocytosis is the process in which cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of pinocytosis","termid":"GO:0048548"},{"relation_name":"positively_regulates","term_name":"pinocytosis","termid":"GO:0006907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pinocytosis","synonyms":[{"name":"activation of pinocytosis","type":"narrow"},{"name":"stimulation of pinocytosis","type":"narrow"},{"name":"up regulation of pinocytosis","type":"exact"},{"name":"up-regulation of pinocytosis","type":"exact"},{"name":"upregulation of pinocytosis","type":"exact"}],"termid":"GO:0048549"}


id: GO:0031039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle of ciliated protozoan cells that contains polyploid copies of a portion of the cell's complete genome. Transcription of genes occurs in macronuclei. Some ciliate species may contain multiple macronuclei per cell.","definition_xrefs":["GOC:ns"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"macronucleus","secondary_identifiers":["Wikipedia:Macronucleus"],"termid":"GO:0031039"}


id: PBO:0034457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_MCB_promoters","termid":"PBO:0034457"}


id: GO:0030659
data:
  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id: GO:0031207
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id: MONDO:0006657
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id: MONDO:0000534
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id: PBO:0056866
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id: PBO:0067746
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id: PBO:0005576
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id: GO:0140772
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id: PBO:0053339
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id: PBO:0091902
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id: PBO:0030019
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id: GO:0042175
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id: FYPO:0008146
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id: PBO:0059280
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L38","termid":"PBO:0059280"}


id: PBO:0048946
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 1","termid":"PBO:0048946"}


id: FYPO:0005579
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased in centromeric regions during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic sister chromatid cohesion","termid":"FYPO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000641"],"is_obsolete":false,"name":"decreased meiotic sister chromatid cohesion at centromere","synonyms":[{"name":"decreased meiotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"decreased sister chromatid cohesion at centromere during meiosis","type":"exact"},{"name":"reduced meiotic sister chromatid cohesion at centromere","type":"exact"}],"termid":"FYPO:0005579"}


id: MONDO:1011845
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, non-human animal","secondary_identifiers":["OMIA:000527"],"termid":"MONDO:1011845","xrefs":{"Monarch":{"xref_id":"1011845"}}}


id: PBO:0063703
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 2","termid":"PBO:0063703"}


id: GO:0072390
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol metabolic process","termid":"GO:0072390"}


id: PBO:0116812
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFLAM antisense RNA 5","termid":"PBO:0116812"}


id: MONDO:0015398
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemifacial microsomia (obsolete MONDO:0015398)","termid":"MONDO:0015398","xrefs":{"Monarch":{"xref_id":"0015398"}}}


id: GO:0001090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIIH class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIIH-class binding (obsolete GO:0001090)","synonyms":[{"name":"TFIIH-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001090"}


id: MONDO:0021562
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the umbilical cord stump in newborns.","definition_xrefs":["NCIT:C116008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalitis","secondary_identifiers":["SCTID:239095007","GTR:AN0533760","MEDGEN:508000","UMLS:C0028992"],"synonyms":[{"name":"Omphalitis","type":"related"},{"name":"omphalitis","type":"exact"}],"termid":"MONDO:0021562","xrefs":{"Monarch":{"xref_id":"0021562"}}}


id: FYPO:0005179
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) exposure during mitotic G1 phase is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to UV. The most common abnormality is for the cell cycle to progress as in the absence of UV.","definition_xrefs":["PMID:15498101","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle delay following UV exposure during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ultraviolet light during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to UV during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005179"}


id: MOD:01339
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id: MOD:00271
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, the C-3' of a tyrosine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:9095195","RESID:AA0266","PubMed:8325841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-tyrosine residue","termid":"MOD:02075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-tyrosine","synonyms":[{"name":"(10S,11S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-10-(2-hydroxy-5-[(S)-2-amino-2-carboxy]ethylphenyl)-3,8,13,17-tetramethyl-21H,23H-10,11-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-(tyros-3'-yl)-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-tyrosine","type":"exact"}],"termid":"MOD:00271"}


id: MONDO:1011264
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy that occurs in dogs due to a mutation in ADAM9 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy, ADAM9-related, dog","secondary_identifiers":["OMIA:001520-9615"],"synonyms":[{"name":"retinal atrophy - cone-rod dystrophy 3, dog","type":"related"}],"termid":"MONDO:1011264","xrefs":{"Monarch":{"xref_id":"1011264"}}}


id: GO:0061733
data:
  {"annotated_genes":["SJAG_03537","SJAG_04791","SJAG_02165","SJAG_01204","SJAG_02990","SJAG_00676","SJAG_02773","SJAG_03900"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103747],"is_not":false,"summary":null,"term":"GO:0061733"},{"annotations":[65284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004402"},{"annotations":[73891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[91177,90521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[91178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[98726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[72344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[91179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[73894,98727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[88189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[88190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[88191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + lysine in peptide = CoA + N-acetyl-lysine-peptide. The acetyl group is transferred to the nitrogen atom at position 6 of the lysine residue in the protein.","definition_xrefs":["GOC:dph","RHEA:45948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-acetyltransferase activity","termid":"GO:0034212"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00676":null,"SJAG_01204":null,"SJAG_02165":null,"SJAG_02773":null,"SJAG_02990":null,"SJAG_03537":null,"SJAG_03900":null,"SJAG_04791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0140096","GO:0016740","GO:0034212","GO:0003824"],"is_obsolete":false,"name":"protein-lysine-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9825747","Reactome:R-HSA-9701531","Reactome:R-HSA-9756494","Reactome:R-HSA-6811508","Reactome:R-HSA-9620515","Reactome:R-HSA-9626945","Reactome:R-HSA-9617758","Reactome:R-HSA-8951966"],"synonyms":[{"name":"peptide-lysine-N-acetylase activity","type":"exact"},{"name":"peptide-lysine-N-acetyltransferase activity","type":"exact"},{"name":"peptide-lysine-acetyltransferase activity","type":"exact"},{"name":"protein acetylase activity","type":"broad"},{"name":"protein acetyltransferase activity","type":"broad"},{"name":"protein-lysine-N-acetylase activity","type":"exact"}],"termid":"GO:0061733","terms_by_termid":{"GO:0004402":null,"GO:0010485":null,"GO:0032931":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0043998":null,"GO:0044016":null,"GO:0061733":null}}


id: MONDO:0008310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hutchinson-Gilford progeria syndrome is a rare, fatal, autosomal dominant and premature aging disease, beginning in childhood and characterized by growth reduction, failure to thrive, a typical facial appearance (prominent forehead, protuberant eyes, thin nose with a beaked tip, thin lips, micrognathia and protruding ears) and distinct dermatologic features (generalized alopecia, aged-looking skin, sclerotic and dimpled skin over the abdomen and extremities, prominent cutaneous vasculature, dyspigmentation, nail hypoplasia and loss of subcutaneous fat).","definition_xrefs":["Orphanet:740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"},{"relation_name":"is_a","term_name":"progeria","termid":"MONDO:0020732"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"Hutchinson-Gilford progeria syndrome","secondary_identifiers":["SCTID:238870004","DOID:3911","GARD:7467","NCIT:C34951","NORD:1257","MedDRA:10036794","NANDO:1201007","ICD9:259.8","OMIM:176670","NANDO:2200833","MEDGEN:46123","UMLS:C0033300"],"synonyms":[{"name":"HGPS","type":"exact"},{"name":"Hutchinson Gilford progeria syndrome","type":"related"},{"name":"Hutchinson Gilford syndrome","type":"exact"},{"name":"Hutchinson-Gilford disease","type":"exact"},{"name":"Hutchinson-Gilford progeria","type":"exact"},{"name":"Hutchinson-Gilford progeria syndrome","type":"exact"},{"name":"premature senility syndrome","type":"exact"},{"name":"progeria","type":"broad"},{"name":"progeria syndrome, childhood-onset","type":"related"}],"termid":"MONDO:0008310","xrefs":{"Monarch":{"xref_id":"0008310"}}}


id: GO:0009300
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107723],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060195"}]},"cv_name":"biological_process","definition":"The synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"antisense RNA metabolic process","termid":"GO:0042868"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"antisense RNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009300","terms_by_termid":{"GO:0060195":null}}


id: FYPO:0007556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diethylstilbestrol. Cells stop growing (and may die) at a concentration of diethylstilbestrol that allows wild type cells to grow.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to diethylstilbestrol","synonyms":[{"name":"hypersensitive to diethylstilbestrol","type":"exact"},{"name":"sensitive to DES","type":"exact"},{"name":"sensitive to diethylstilbestrol during mitotic cell cycle","type":"related"},{"name":"sensitive to diethylstilbestrol during vegetative growth","type":"exact"}],"termid":"FYPO:0007556"}


id: PBO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha mannosidase Mnl1 (predicted)","termid":"PBO:0002360"}


id: MONDO:0015129
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"}]},"cv_name":"mondo","definition":"A chronic disorder of the adrenal cortex resulting in the inadequate production of glucocorticoid and mineralocorticoid hormones.","definition_xrefs":["Orphanet:101959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenocortical insufficiency","termid":"MONDO:0000004"},{"relation_name":"is_a","term_name":"primary adrenal insufficiency","termid":"MONDO:0015128"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"is_obsolete":false,"name":"chronic primary adrenal insufficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19803","NCIT:C26689","OMIM:240200","SCTID:373662000","MESH:D000224","UMLS:C0001403","NANDO:1200411","DOID:13774","MedDRA:10001130","NANDO:2200359","MEDGEN:1324","NANDO:2200360","ICD9:255.41"],"synonyms":[{"name":"Addison disease","type":"exact"},{"name":"Addison disease, chronic adrenal insufficiency","type":"exact"},{"name":"Addison's disease","type":"exact"},{"name":"CPAI","type":"exact"},{"name":"adrenal aplasia","type":"related"},{"name":"adrenal gland hypofunction","type":"related"},{"name":"adrenal hypoplasia","type":"related"},{"name":"autoimmune Addison disease","type":"exact"},{"name":"autoimmune adrenalitis","type":"exact"},{"name":"autoimmune primary adrenal insufficiency","type":"narrow"},{"name":"chronic adrenocorticoid insufficiency","type":"exact"},{"name":"classic Addison's disease","type":"exact"},{"name":"hypoadrenocorticism familial","type":"related"},{"name":"hypoadrenocorticism, familial","type":"exact"},{"name":"primary Addison's disease","type":"exact"},{"name":"primary adrenal insufficiency, chronic","type":"exact"},{"name":"primary adrenocortical insufficiency","type":"exact"},{"name":"primary hypoadrenalism","type":"exact"}],"termid":"MONDO:0015129","terms_by_termid":{"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0015129"}}}


id: FYPO:0001727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular glutamine level","synonyms":[{"name":"decreased cellular L-glutamine level","type":"exact"},{"name":"decreased cellular glutamine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular glutamine level during vegetative growth","type":"exact"},{"name":"decreased level of glutamine in cell","type":"exact"},{"name":"reduced cellular glutamine level","type":"exact"},{"name":"reduced level of glutamine in cell","type":"exact"}],"termid":"FYPO:0001727"}


id: MONDO:0017496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital absence of thigh and lower leg with foot present","termid":"MONDO:0017442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of thigh and lower leg with foot present, unilateral","secondary_identifiers":["Orphanet:295089"],"synonyms":[{"name":"Femorotibiofibular intercalary transverse meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017496","xrefs":{"Monarch":{"xref_id":"0017496"}}}


id: MONDO:0004745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent and usually painful erection that lasts for at least four hours in the absence of physical or psychological stimulation, which can be caused by hematologic disorders, including sickle cell disease and leukemia, spinal cord injuries, and medications.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vascular disease","termid":"MONDO:0005294"},{"relation_name":"is_a","term_name":"erectile dysfunction","termid":"MONDO:0005362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priapism","secondary_identifiers":["MEDGEN:19462","MESH:D011317","SCTID:6273006","DOID:9286","icd11.foundation:1983776037","ICD9:607.3","GARD:19933","UMLS:C0033117","Orphanet:140949","ICD10CM:N48.3"],"synonyms":[{"name":"low-flow priapism","type":"narrow"},{"name":"mentulagra","type":"exact"}],"termid":"MONDO:0004745","xrefs":{"Monarch":{"xref_id":"0004745"}}}


id: MONDO:0017356
data:
  {"annotated_genes":["SJAG_00495","SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87002,87003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[84790,84791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[85770,85769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[86262,86263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[86832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of ornithine metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of ornithine or proline metabolism","termid":"MONDO:0019230"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of ornithine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:289869","GARD:21158","MEDGEN:575181","SCTID:237928008","icd11.foundation:1711515805","UMLS:C0342690"],"synonyms":[{"name":"disorder of ornithine metabolism","type":"exact"},{"name":"inborn error of ornithine metabolic process","type":"exact"},{"name":"inborn ornithine metabolic process disorder","type":"exact"},{"name":"rare inborn error of ornithine metabolic process","type":"exact"}],"termid":"MONDO:0017356","terms_by_termid":{"MONDO:0009053":null,"MONDO:0009796":null,"MONDO:0011006":null,"MONDO:0014702":null,"MONDO:0014706":null},"xrefs":{"Monarch":{"xref_id":"0017356"}}}


id: MONDO:0006818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete keratoconjunctivitis sicca (obsolete MONDO:0006818)","termid":"MONDO:0006818","xrefs":{"Monarch":{"xref_id":"0006818"}}}


id: GO:0090495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a low-density lipoprotein particle into its constituent components.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle disassembly","termid":"GO:0071829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle disassembly","termid":"GO:0090495"}


id: GO:0019886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class II","secondary_identifiers":["GO:0048005","Reactome:R-HSA-2132295","GO:0042591"],"synonyms":[{"name":"antigen presentation, exogenous antigen via MHC class II","type":"broad"},{"name":"antigen presentation, exogenous peptide antigen","type":"broad"},{"name":"antigen processing, exogenous antigen via major histocompatibility complex class II","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0019886"}


id: GO:0016415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an octanoyl (CH3-[CH2]6-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete octanoyltransferase activity (obsolete GO:0016415)","termid":"GO:0016415"}


id: MONDO:0018153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Erdheim-Chester disease (ECD), a non-Langerhans form of histiocytosis, is a multisystemic disease characterized by various manifestations such as skeletal involvement with bone pain, exophthalmos, diabetes insipidus, renal impairment and central nervous system (CNS) and/or cardiovascular involvement.","definition_xrefs":["Orphanet:35687"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"histiocytoma","termid":"MONDO:0005509"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Erdheim-Chester disease","secondary_identifiers":["ICD9:277.89","GARD:6369","MedDRA:10060801","EFO:1000926","MESH:D031249","NORD:1102","SCTID:699537002","DOID:4329","icd11.foundation:1395439137","NANDO:2200038","NCIT:C53972","UMLS:C0878675","MEDGEN:163902","icd11.foundation:146718003","ONCOTREE:ECD"],"synonyms":[{"name":"ECD","type":"related"},{"name":"Erdheim Chester Disease","type":"exact"},{"name":"Erdheim Chester disease","type":"related"},{"name":"Erdheim-Chester disease","type":"exact"},{"name":"lipogranulomatosis","type":"exact"},{"name":"lipoid granulomatosis","type":"related"},{"name":"polyostotic sclerosing histiocytosis","type":"exact"}],"termid":"MONDO:0018153","xrefs":{"Monarch":{"xref_id":"0018153"}}}


id: MONDO:0023069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"},{"relation_name":"is_a","term_name":"skull disorder","termid":"MONDO:0024654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enlarged vestibular aqueduct syndrome","secondary_identifiers":["UMLS:C1863752","DOID:0050332","MEDGEN:355050"],"synonyms":[{"name":"enlarged vestibular aqueduct","type":"related"},{"name":"enlarged vestibular aqueduct syndrome","type":"exact"},{"name":"large vestibular aqueduct syndrome","type":"related"}],"termid":"MONDO:0023069","xrefs":{"Monarch":{"xref_id":"0023069"}}}


id: PBO:0046794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor II thrombin receptor","termid":"PBO:0046794"}


id: GO:0019841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"},{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"retinol binding","synonyms":[{"name":"vitamin A1 alcohol binding","type":"exact"},{"name":"vitamin A1 binding","type":"exact"}],"termid":"GO:0019841"}


id: PBO:0068065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 370","termid":"PBO:0068065"}


id: MONDO:1011322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iatrogenic disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322","xrefs":{"Monarch":{"xref_id":"1011322"}}}


id: MONDO:0006841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphangioma characterized by the presence of collagen bundle formation. It has an indolent clinical course and may be associated with skin plaques.","definition_xrefs":["NCIT:C3203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphangioendothelioma","secondary_identifiers":["UMLS:C0024217","SCTID:403975006","MEDGEN:7411","EFO:1001026"],"synonyms":[{"name":"acquired progressive lymphangioma","type":"exact"}],"termid":"MONDO:0006841","xrefs":{"Monarch":{"xref_id":"0006841"}}}


id: PATO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer possessing an uninterrupted or unbroken connection or spatial distribution relative to the position of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"continuous with","termid":"PATO:0005011"}


id: PBO:0117133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPN9 antisense RNA 1","termid":"PBO:0117133"}


id: PR:O94398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl17 gene.","definition_xrefs":["UniProtKB:O94398","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L17, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.05c","synonyms":[{"name":"Spom972h-mrpl17","type":"exact"}],"termid":"PR:O94398"}


id: MONDO:0017810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of amyloidosis characterized by accumulation and extensive visceral deposition of anamyloidogenic variant of beta 2 microglobulin leading to progressive gastrointestinal dysfunction, Sjögren syndrome and autonomic neuropathy.","definition_xrefs":["Orphanet:314652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABeta2M amyloidosis","termid":"MONDO:0018590"},{"relation_name":"is_a","term_name":"hereditary amyloidosis","termid":"MONDO:0018634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"variant ABeta2M amyloidosis","secondary_identifiers":["MEDGEN:928338","icd11.foundation:1466418791","SCTID:722292000","GARD:21382","UMLS:C4302669","DOID:0080929"],"synonyms":[{"name":"autosomal dominant beta2-microglobulinic amyloidosis","type":"exact"}],"termid":"MONDO:0017810","xrefs":{"Monarch":{"xref_id":"0017810"}}}


id: PBO:0028400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0028400"}


id: PBO:0089433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Hhp2","termid":"PBO:0089433"}


id: GO:0048795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the swim bladder is generated and organized. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"swim bladder development","termid":"GO:0048794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder morphogenesis","synonyms":[{"name":"gas bladder morphogenesis","type":"exact"}],"termid":"GO:0048795"}


id: GO:0039674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or a viral particle out of the host cell nucleus.","definition_xrefs":["VZ:2177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"is_a","term_name":"exit from host cell","termid":"GO:0035891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus","termid":"GO:0039674"}


id: FYPO:0002028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one actomyosin contractile ring.","definition_xrefs":["PomBase:mah","PMID:8834798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"multiple actomyosin contractile rings present","synonyms":[{"name":"actomyosin contractile rings present in greater numbers","type":"exact"},{"name":"multiple actomyosin contractile rings present during mitotic cell cycle","type":"related"},{"name":"multiple actomyosin contractile rings present during vegetative growth","type":"exact"},{"name":"multiple cytokinetic contractile rings present","type":"exact"},{"name":"multiple mitotic contractile rings present","type":"exact"}],"termid":"FYPO:0002028"}


id: PBO:0061923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily F member 12, pseudogene","termid":"PBO:0061923"}


id: PBO:0070506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 5","termid":"PBO:0070506"}


id: GO:0060221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a retinal rod cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal rod cell differentiation","termid":"GO:0060221"}


id: MONDO:0015258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete botulism (obsolete MONDO:0015258)","termid":"MONDO:0015258","xrefs":{"Monarch":{"xref_id":"0015258"}}}


id: PBO:0045876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta","termid":"PBO:0045876"}


id: PBO:0079989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 27","termid":"PBO:0079989"}


id: GO:0004810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA precursor + ATP + 2 CTP = a tRNA with a 3' CCA end + 3 diphosphate.","definition_xrefs":["RHEA:14433","PMID:2247609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0140101","GO:0140098","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"CCA tRNA nucleotidyltransferase activity","secondary_identifiers":["GO:0016437","MetaCyc:TRNA-CYTIDYLYLTRANSFERASE-RXN","EC:2.7.7.72"],"synonyms":[{"name":"ATP(CTP)-tRNA nucleotidyltransferase","type":"broad"},{"name":"ATP(CTP):tRNA nucleotidyltransferase activity","type":"broad"},{"name":"CCA-adding enzyme activity","type":"related"},{"name":"CTP(ATP):tRNA nucleotidyltransferase","type":"broad"},{"name":"CTP:tRNA cytidylyltransferase activity","type":"broad"},{"name":"ribonucleic cytidylic cytidylic adenylic pyrophosphorylase","type":"broad"},{"name":"ribonucleic cytidylyltransferase","type":"broad"},{"name":"tRNA CCA-diphosphorylase activity","type":"related"},{"name":"tRNA adenylyl(cytidylyl)transferase","type":"broad"},{"name":"tRNA cytidylyltransferase activity","type":"related"},{"name":"tRNA-nucleotidyltransferase activity","type":"broad"},{"name":"transfer RNA adenylyltransferase","type":"broad"},{"name":"transfer ribonucleate adenyltransferase activity","type":"related"},{"name":"transfer ribonucleate adenylyltransferase","type":"broad"},{"name":"transfer ribonucleate nucleotidyltransferase","type":"broad"},{"name":"transfer ribonucleic acid nucleotidyl transferase","type":"broad"},{"name":"transfer ribonucleic adenylyl (cytidylyl) transferase","type":"broad"},{"name":"transfer ribonucleic-terminal trinucleotide nucleotidyltransferase","type":"broad"},{"name":"transfer-RNA nucleotidyltransferase","type":"broad"}],"termid":"GO:0004810"}


id: GO:1902687
data:
  {"annotated_genes":["SJAG_03535","SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76552,78205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017177"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of glucosidase activity.","definition_xrefs":["GO_REF:0000088","PMID:23826932","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03280":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glucosidase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1902687","terms_by_termid":{"GO:0017177":null}}


id: GO:0038137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals transmitted by a heterodimeric complex of the tyrosine kinase receptors EGFR (epidermal growth factor receptor/ERBB1) and ERBB4. The pathway begins with binding of a ligand to either cell surface receptor, or the dimeric receptor complex, and ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"is_a","term_name":"ERBB4 signaling pathway","termid":"GO:0038130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ERBB4-EGFR signaling pathway","synonyms":[{"name":"ERBB1-ERBB4 signaling pathway","type":"exact"},{"name":"ERBB4-EGFR signalling pathway","type":"exact"},{"name":"HER1-HER4 signaling pathway","type":"exact"}],"termid":"GO:0038137"}


id: GO:0061322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a disseminated nephrocyte. A disseminated nephrocyte is an insect renal cell that filters hemolymph and is found at scattered locations in the fat body or other tissues. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["GOC:19783135","GOC:dph","GOC:mtg_kidney_jan10","CL:0002524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disseminated nephrocyte differentiation","termid":"GO:0061322"}


id: PBO:0042683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein epsilon","termid":"PBO:0042683"}


id: PBO:0003234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S19 (predicted)","termid":"PBO:0003234"}


id: PBO:0075994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP2 metalloreductase","termid":"PBO:0075994"}


id: PBO:0077097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8A","termid":"PBO:0077097"}


id: GO:0005075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathway-specific SMAD protein (obsolete GO:0005075)","synonyms":[{"name":"pathway-specific SMAD protein","type":"exact"}],"termid":"GO:0005075"}


id: GO:0001982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The lowering of the number of nerve impulses from baroreceptors as a result of decreased stretch of an artery that results in an increased in sympathetic nerve impulses to peripheral blood vessels.","definition_xrefs":["ISBN:0323031951","ISBN:0721643949","GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","termid":"GO:0001978"},{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}


id: PBO:0039185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 14","termid":"PBO:0039185"}


id: PBO:0059994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 14","termid":"PBO:0059994"}


id: PBO:0116501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin-repeat related protein","termid":"PBO:0116501"}


id: MONDO:0700227
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85873,85874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","definition":"Any maculopathy caused by a variant in the ELOVL4 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ELOVL4-related maculopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"ELOVL4-related maculopathy","type":"exact"}],"termid":"MONDO:0700227","terms_by_termid":{"MONDO:0010819":null},"xrefs":{"Monarch":{"xref_id":"0700227"}}}


id: PBO:0055178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2602","termid":"PBO:0055178"}


id: PBO:0077726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing adaptor 6C","termid":"PBO:0077726"}


id: SO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the splice region of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_splice_region_variant","synonyms":[{"name":"incomplete transcript splice region variant","type":"exact"}],"termid":"SO:0002079"}


id: GO:0007129
data:
  {"annotated_genes":["SJAG_02286","SJAG_00727","SJAG_03698","SJAG_04950","SJAG_03926","SJAG_02606","SJAG_04143"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78803,87520,107574,110301,110974],"is_not":false,"summary":null,"term":"GO:0007129"},{"annotations":[89352,116803],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle process where side by side pairing and physical juxtaposition of homologous chromosomes is created during meiotic prophase. Homologous chromosome pairing begins when the chromosome arms begin to pair from the clustered telomeres and ends when synaptonemal complex or linear element assembly is complete.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:22582262","PMID:23117617","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_02286":null,"SJAG_02606":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_04143":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"homologous chromosome pairing at meiosis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Synapsis"],"synonyms":[{"name":"chromosomal pairing","type":"related"},{"name":"chromosomal synapsis","type":"narrow"},{"name":"synapsis","type":"narrow"}],"termid":"GO:0007129","terms_by_termid":{"GO:0007129":null,"GO:0030999":null}}


id: MONDO:0006854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term describing a soft tissue tumor which consists of two or more mesenchymal lines of differentiation, excluding a fibroblastic line of differentiation.","definition_xrefs":["NCIT:C3233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchymoma","secondary_identifiers":["EFO:1001042","MESH:D008637","UMLS:C0025464","DOID:2668","MEDGEN:7553","ICDO:8990/1"],"synonyms":[{"name":"mesenchymoma","type":"exact"}],"termid":"MONDO:0006854","xrefs":{"Monarch":{"xref_id":"0006854"}}}


id: PBO:0068854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 92, pseudogene","termid":"PBO:0068854"}


id: MONDO:0002930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma involving a kidney.","definition_xrefs":["MONDO:patterns/sarcoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"kidney sarcoma","secondary_identifiers":["SCTID:254918001","DOID:4242","UMLS:C0346251","MEDGEN:87548","NCIT:C4525","ICD9:189.0"],"synonyms":[{"name":"kidney sarcoma","type":"exact"},{"name":"renal sarcoma","type":"exact"},{"name":"sarcoma of kidney","type":"exact"},{"name":"sarcoma of the kidney","type":"exact"}],"termid":"MONDO:0002930","xrefs":{"Monarch":{"xref_id":"0002930"}}}


id: PBO:0084316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain family histone demethylase specific for H3-K36; similar to proteins found in human, mouse, drosophila, X. laevis, C. elegans, and S. pombe","termid":"PBO:0084316"}


id: MONDO:0011802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypercalciuria, absorptive, 1","secondary_identifiers":["GARD:18584","UMLS:C1846573","MEDGEN:375924","MESH:C564600","OMIM:607258"],"synonyms":[{"name":"Hca1","type":"related"},{"name":"hypercalciuria, absorptive","type":"exact"},{"name":"hypercalciuria, absorptive, 1","type":"exact"},{"name":"hypercalciuria, absorptive, type 1","type":"exact"}],"termid":"MONDO:0011802","xrefs":{"Monarch":{"xref_id":"0011802"}}}


id: PBO:0003720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpc10","termid":"PBO:0003720"}


id: PBO:0088133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; member of the multidrug resistance family; YCR023C is not an essential gene","termid":"PBO:0088133"}


id: PBO:0091748
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1948954delA","termid":"PBO:0091748"}


id: PBO:0064415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 8B","termid":"PBO:0064415"}


id: PBO:0055892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 10B","termid":"PBO:0055892"}


id: MONDO:0008772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the KLK4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 2A1","secondary_identifiers":["GARD:9495","MESH:C538242","MEDGEN:436039","OMIM:204700","MESH:C567146","DOID:0110057","UMLS:C2673922"],"synonyms":[{"name":"AI2A1","type":"exact"},{"name":"KLK4 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in KLK4","type":"exact"},{"name":"amelogenesis imperfecta pigmented hypomaturation type","type":"related"},{"name":"amelogenesis imperfecta pigmented hypomaturation type 1","type":"exact"},{"name":"amelogenesis imperfecta type IIA1","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA1","type":"related"},{"name":"amelogenesis imperfecta, pigmented hypomaturation type, 1","type":"related"},{"name":"amelogenesis imperfecta, type IIA1","type":"exact"}],"termid":"MONDO:0008772","xrefs":{"Monarch":{"xref_id":"0008772"}}}


id: MONDO:0010459
data:
  {"annotated_genes":["SJAG_07000"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86659],"is_not":false,"summary":null,"term":"MONDO:0010459"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the UBQLN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3275459","DOID:0060206","GARD:15269","MEDGEN:477090","OMIM:300857"],"synonyms":[{"name":"ALS15","type":"exact"},{"name":"UBQLN2 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 15","type":"exact"},{"name":"amyotrophic lateral sclerosis 15 with or without frontotemporal dementia","type":"related"},{"name":"amyotrophic lateral sclerosis 15, with or without frontotemporal dementia","type":"exact"},{"name":"amyotrophic lateral sclerosis 15, with or without frontotemporal dementia, X-linked dominant","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in UBQLN2","type":"exact"},{"name":"amyotrophic lateral sclerosis type 15","type":"exact"}],"termid":"MONDO:0010459","terms_by_termid":{"MONDO:0010459":null},"xrefs":{"Monarch":{"xref_id":"0010459"}}}


id: PBO:0088843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase, Sirtuin family, NAD-dependent Hst2","termid":"PBO:0088843"}


id: PBO:0053855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1124","termid":"PBO:0053855"}


id: GO:0036310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ATP-dependent activity that facilitates the formation of a complementary double-stranded DNA molecule.","definition_xrefs":["PMID:22705370","PMID:22759634","PMID:22704558","PMID:22888405","PMID:21078962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"},{"relation_name":"is_a","term_name":"DNA/DNA annealing activity","termid":"GO:1990814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674","GO:0140097","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"ATP-dependent DNA/DNA annealing activity","synonyms":[{"name":"ATP-dependent DNA annealing activity","type":"related"},{"name":"DNA rewinding activity","type":"related"},{"name":"annealing helicase activity","type":"related"},{"name":"nucleoside-triphosphatase activity involved in DNA annealing","type":"exact"}],"termid":"GO:0036310"}


id: MONDO:0035551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic cerebral small vessel disease characterized by an adult-onset primary microangiopathy with severe atherosclerosis of arterioles and secondary leukoencephalopathy. Patients may present with migraine, transient ischemic attacks, stroke with central facial palsy, cognitive dysfunction with impaired concentration, dementia, depression, movement disorder, vertigo, dysphagia, dysarthria, sicca syndrome, impaired REM sleep, and therapy-resistant hypertension, among others. Brain MRI typically shows a leukoencephalopathy that is disproportionately severe and extensive compared to the clinical disease.","definition_xrefs":["Orphanet:575553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin a-related arteriopathy-strokes-leukoencephalopathy","secondary_identifiers":["ICD10CM:I67.8","GARD:22320","MEDGEN:1804103","UMLS:C5680354"],"synonyms":[{"name":"CARASAL","type":"exact"}],"termid":"MONDO:0035551","xrefs":{"Monarch":{"xref_id":"0035551"}}}


id: GO:0047112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + O2 + phosphate + pyruvate = acetyl phosphate + CO2 + H2O2.","definition_xrefs":["RHEA:20848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pyruvate oxidase activity","secondary_identifiers":["KEGG_REACTION:R00207","EC:1.2.3.3","MetaCyc:1.2.3.3-RXN"],"synonyms":[{"name":"phosphate-dependent pyruvate oxidase activity","type":"related"},{"name":"pyruvate:oxygen 2-oxidoreductase (phosphorylating)","type":"related"},{"name":"pyruvic oxidase activity","type":"related"}],"termid":"GO:0047112"}


id: GO:0043853
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric protein complex composed of a methanol methyltransferase subunit, a corrinoid protein and a methanol-specific corrinoid:coenzyme M methyltransferase subunit. Catalyzes the transfer of a methyl group from methanol to coenzyme M as part of the pathway of methanogenesis from methanol.","definition_xrefs":["PMID:9363780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methanol-CoM methyltransferase complex","synonyms":[{"name":"methanol-coenzyme M methyltransferase complex","type":"exact"},{"name":"methanol: CoM methyltransferase complex","type":"exact"},{"name":"methanol: coenzyme M methyltransferase complex","type":"exact"},{"name":"methanol:CoM methyltransferase complex","type":"exact"},{"name":"methanol:coenzyme M methyltransferase complex","type":"exact"}],"termid":"GO:0043853"}


id: PBO:0061409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPTN intronic transcript 1","termid":"PBO:0061409"}


id: PBO:0114382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane carboxylic acid transmembrane transporter Tna1","termid":"PBO:0114382"}


id: PBO:0039152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 7","termid":"PBO:0039152"}


id: GO:0120032
data:
  {"annotated_genes":["SJAG_02379","SJAG_04509","SJAG_01794","SJAG_00514","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111113,87657,93246,89628,90611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of plasma membrane bounded cell projection assembly.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of plasma membrane bounded cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120032","terms_by_termid":{"GO:1902917":null}}


id: PBO:0110405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYGO2 and SHC1 antisense RNA 1","termid":"PBO:0110405"}


id: GO:1902671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left anterior flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["GO_REF:0000064","GOC:giardia","ISBN:9780124260207","PMID:5961344","GOC:TermGenie","PMID:16607022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left anterior flagellum","termid":"GO:0097554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"left anterior basal body","synonyms":[{"name":"cilial basal body of left anterior cilium","type":"exact"},{"name":"cilial basal body of left anterior flagellum","type":"exact"},{"name":"ciliary basal body of left anterior cilium","type":"exact"},{"name":"ciliary basal body of left anterior flagellum","type":"exact"},{"name":"cilium basal body of left anterior cilium","type":"exact"},{"name":"cilium basal body of left anterior flagellum","type":"exact"},{"name":"left anterior flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left anterior cilium","type":"exact"},{"name":"microtubule basal body of left anterior flagellum","type":"exact"}],"termid":"GO:1902671"}


id: PR:O94484
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C417.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.03","synonyms":[{"name":"Spom972h-SPCC417.03","type":"exact"}],"termid":"PR:O94484"}


id: MONDO:0008776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis of gingiva and conjunctiva, with intellectual disability","secondary_identifiers":["OMIM:204850","UMLS:C1859815","MEDGEN:347240","MESH:C565958"],"synonyms":[{"name":"Hornova Dlushosova syndrome","type":"related"},{"name":"amyloidosis of gingiva and conjunctiva with intellectual disability","type":"related"},{"name":"amyloidosis of gingiva and conjunctiva with mental retardation","type":"related"},{"name":"amyloidosis of gingiva and conjunctiva, with intellectual disability","type":"exact"},{"name":"amyloidosis of gingiva and conjunctiva, with mental retardation","type":"exact"}],"termid":"MONDO:0008776","xrefs":{"Monarch":{"xref_id":"0008776"}}}


id: PBO:0068734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 5, pseudogene","termid":"PBO:0068734"}


id: GO:0008748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-ethylmaleimide + NADPH + 2 H+ = N-ethylsuccinimide + NADP+.","definition_xrefs":["MetaCyc:RXN0-5101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N-ethylmaleimide reductase activity","secondary_identifiers":["RHEA:35523"],"termid":"GO:0008748"}


id: GO:0045970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of juvenile hormone metabolic process","termid":"GO:0045928"},{"relation_name":"is_a","term_name":"regulation of juvenile hormone catabolic process","termid":"GO:0045952"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone catabolic process","termid":"GO:0006719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of juvenile hormone catabolic process","synonyms":[{"name":"down regulation of juvenile hormone catabolic process","type":"exact"},{"name":"down-regulation of juvenile hormone catabolic process","type":"exact"},{"name":"downregulation of juvenile hormone catabolic process","type":"exact"},{"name":"inhibition of juvenile hormone catabolic process","type":"narrow"},{"name":"negative regulation of juvenile hormone breakdown","type":"exact"},{"name":"negative regulation of juvenile hormone catabolism","type":"exact"},{"name":"negative regulation of juvenile hormone degradation","type":"exact"}],"termid":"GO:0045970"}


id: FYPO:0001568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular glutamate level","synonyms":[{"name":"increased cellular L-glutamate level","type":"exact"},{"name":"increased cellular glutamate level during mitotic cell cycle","type":"related"},{"name":"increased cellular glutamate level during vegetative growth","type":"exact"},{"name":"increased glutamate accumulation","type":"related"}],"termid":"FYPO:0001568"}


id: GO:1990091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sodium-dependent hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.","definition_xrefs":["PMID:20460380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self proteolysis","termid":"GO:0097264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sodium-dependent self proteolysis","termid":"GO:1990091"}


id: MONDO:0016774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lichen planus (LP) pigmentosus is a rare variant of cutaneous lichen planus characterized by the presence of hyperpigmented lichenoid lesions in sun-exposed or flexural areas of the body.","definition_xrefs":["Orphanet:254463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen planus pigmentosus","secondary_identifiers":["UMLS:C0406366","GARD:10816","icd11.foundation:1235685123","MEDGEN:590349","SCTID:717061002"],"synonyms":[{"name":"LP pigmentosa","type":"exact"},{"name":"LP pigmentosus","type":"exact"},{"name":"lichen planus pigmentosa","type":"exact"},{"name":"lichen planus pigmentosus inversus","type":"exact"}],"termid":"MONDO:0016774","xrefs":{"Monarch":{"xref_id":"0016774"}}}


id: PBO:0058884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10400","termid":"PBO:0058884"}


id: RO:0002412
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p is immediately causally upstream of q iff both (a) p immediately precedes q and (b) p is causally upstream of q. In addition, the output of p  must be an input of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"immediately_precedes","termid":"RO:0002090"},{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_upstream_of","termid":"RO:0002412"}


id: PBO:0044895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPP autophagy regulator 1","termid":"PBO:0044895"}


id: GO:0014717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of satellite cell activation. The satellite cell activation is the process that initiates satellite cell division by causing it to move from quiescence to the G1 stage of the cell cycle. The cell swells and there are a number of other small changes. The cells then start to divide. Following cell division the cells will differentiate.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue regeneration","termid":"GO:0043416"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014717"}


id: PBO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nutritional copper sensing transcription factor Cuf1","termid":"PBO:0000335"}


id: PBO:0016073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node protein Nod1","termid":"PBO:0016073"}


id: PBO:0018154
data:
  {"annotation_feature_type":"gene","cv_name":"external_link","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT overexpression expression profiling","termid":"PBO:0018154"}


id: PBO:0077621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 10 pseudogene 2","termid":"PBO:0077621"}


id: PBO:0073652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sciatic injury induced lincRNA upregulator of SOX11","termid":"PBO:0073652"}


id: PBO:0053447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 395","termid":"PBO:0053447"}


id: PATO:0000930
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000930 light_quality sensitivity (obsolete PATO:0000930)","termid":"PATO:0000930"}


id: PBO:0071833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 28","termid":"PBO:0071833"}


id: PR:000036914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase gad8 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom-gad8","type":"exact"}],"termid":"PR:000036914"}


id: MONDO:0016870
data:
  {"annotated_genes":["SJAG_01548","SJAG_03424"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85494,85493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 5 disorder","termid":"MONDO:0700012"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01548":null,"SJAG_03424":null},"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:261786","MEDGEN:1825959","GARD:20793","UMLS:C5679649"],"synonyms":[{"name":"partial deletion of chromosome type 5","type":"exact"},{"name":"partial monosomy of chromosome 5","type":"exact"}],"termid":"MONDO:0016870","terms_by_termid":{"MONDO:0007925":null},"xrefs":{"Monarch":{"xref_id":"0016870"}}}


id: GO:0102778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cannabigerolate + O2 = delta(9)-tetrahydrocannabinolic acid + hydrogen peroxide.","definition_xrefs":["GOC:pz","RHEA:34135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"delta9-tetrahydrocannabinolate synthase activity","secondary_identifiers":["MetaCyc:RXN-7854","EC:1.21.3.7"],"termid":"GO:0102778"}


id: PBO:0079668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 16","termid":"PBO:0079668"}


id: PR:O43075
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translational activator of cytochrome c oxidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein C8D2.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.12c","secondary_identifiers":["UniProtKB:O43075"],"synonyms":[{"name":"Spom972h-TACO1","type":"exact"}],"termid":"PR:O43075"}


id: GO:0002674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an acute inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"negatively_regulates","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acute inflammatory response","synonyms":[{"name":"down regulation of acute inflammatory response","type":"exact"},{"name":"down-regulation of acute inflammatory response","type":"exact"},{"name":"downregulation of acute inflammatory response","type":"exact"},{"name":"inhibition of acute inflammatory response","type":"narrow"}],"termid":"GO:0002674"}


id: PBO:0031345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_camptothecin","termid":"PBO:0031345"}


id: PBO:0029068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_cellular_response_to_nitric_oxide","termid":"PBO:0029068"}


id: GO:0042647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a proplastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid nucleoid","termid":"GO:0042646"},{"relation_name":"part_of","term_name":"proplastid stroma","termid":"GO:0009571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"proplastid nucleoid","termid":"GO:0042647"}


id: GO:0106186
data:
  {"annotated_genes":["SJAG_02392","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95599,106343],"is_not":false,"summary":null,"term":"GO:0106186"}]},"cv_name":"cellular_component","definition":"The leaflet the plasma membrane at the cell tip that faces the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:vw","PMID:28292899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of plasma membrane","termid":"GO:0009898"},{"relation_name":"part_of","term_name":"plasma membrane of cell tip","termid":"GO:0031520"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cytoplasmic side of plasma membrane, cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106186","terms_by_termid":{"GO:0106186":null}}


id: GO:0002792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide secretion","termid":"GO:0002791"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"negatively_regulates","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of peptide secretion","synonyms":[{"name":"down regulation of peptide secretion","type":"exact"},{"name":"down-regulation of peptide secretion","type":"exact"},{"name":"downregulation of peptide secretion","type":"exact"},{"name":"inhibition of peptide secretion","type":"narrow"}],"termid":"GO:0002792"}


id: GO:0009099
data:
  {"annotated_genes":["SJAG_04149","SJAG_04098","SJAG_06635","SJAG_03985","SJAG_00396"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58595,63848,75897,76606,79736],"is_not":false,"summary":null,"term":"GO:0009099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of valine, 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valine metabolic process","termid":"GO:0006573"},{"relation_name":"is_a","term_name":"pyruvate family amino acid biosynthetic process","termid":"GO:0009079"},{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-valine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"secondary_identifiers":["MetaCyc:VALSYN-PWY"],"synonyms":[{"name":"valine anabolism","type":"exact"},{"name":"valine biosynthesis","type":"exact"},{"name":"valine formation","type":"exact"},{"name":"valine synthesis","type":"exact"}],"termid":"GO:0009099","terms_by_termid":{"GO:0009099":null}}


id: GO:1901782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-cumate.","definition_xrefs":["UniPathway:UPA00937","GOC:TermGenie","GOC:yaf","MetaCyc:PWY-5273","PMID:8631713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"p-cumate metabolic process","termid":"GO:1901781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"p-cumate catabolic process","synonyms":[{"name":"p-cumate breakdown","type":"exact"},{"name":"p-cumate catabolism","type":"exact"},{"name":"p-cumate degradation","type":"exact"}],"termid":"GO:1901782"}


id: GO:0047074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzene-1,2,4-triol + O2 = maleylacetate + 2 H+.","definition_xrefs":["RHEA:35595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxycatechol 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:RXN-10137","EC:1.13.11.37"],"termid":"GO:0047074"}


id: PBO:0069665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 942, pseudogene","termid":"PBO:0069665"}


id: MONDO:0033642
data:
  {"annotated_genes":["SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85536],"is_not":false,"summary":null,"term":"MONDO:0033642"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of ornithine metabolism","termid":"MONDO:0017356"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"disorder of polyamine metabolism","termid":"MONDO:0800159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005066"],"is_obsolete":false,"name":"neurodevelopmental disorder with alopecia and brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17987","OMIM:619075","UMLS:C5436741","Orphanet:544488","MEDGEN:1775930"],"synonyms":[{"name":"Bachmann-Bupp syndrome","type":"exact"},{"name":"NEDABA","type":"exact"},{"name":"global developmental delay-alopecia-macrocephaly-facial dysmorphism-structural brain anomalies syndrome","type":"exact"}],"termid":"MONDO:0033642","terms_by_termid":{"MONDO:0033642":null},"xrefs":{"Monarch":{"xref_id":"0033642"}}}


id: GO:0035726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of common myeloid progenitor cells, resulting in the expansion of a cell population. A common myeloid progenitor cell is a progenitor cell committed to the myeloid lineage.","definition_xrefs":["CL:0000049","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"common myeloid progenitor cell proliferation","termid":"GO:0035726"}


id: GO:0090632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + Neu5Gc = diphosphate + CMP-Neu5Gc.","definition_xrefs":["ISBN:978-1-60805-067-3","PMID:8381411","PMID:11479279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"N-glycolylneuraminic acid (Neu5Gc) cytidylyltransferase activity","synonyms":[{"name":"CMP-Neu5Gc synthetase activity","type":"exact"}],"termid":"GO:0090632"}


id: GO:0090125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of the pre-synaptic cell to the post-synaptic cell via adhesion molecules that contributes to synapse maturation.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-cell adhesion involved in synapse maturation","synonyms":[{"name":"trans-synaptic adhesion","type":"exact"}],"termid":"GO:0090125"}


id: GO:1901310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sterol regulatory element binding protein cleavage.","definition_xrefs":["PMID:15899885","GOC:TermGenie","PMID:16525117"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sterol regulatory element binding protein cleavage (obsolete GO:1901310)","synonyms":[{"name":"activation of SREBP cleavage","type":"exact"},{"name":"activation of sterol regulatory element binding protein cleavage","type":"narrow"},{"name":"positive regulation of SREBP cleavage","type":"exact"},{"name":"up regulation of SREBP cleavage","type":"exact"},{"name":"up regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"up-regulation of SREBP cleavage","type":"exact"},{"name":"up-regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"upregulation of SREBP cleavage","type":"exact"},{"name":"upregulation of sterol regulatory element binding protein cleavage","type":"exact"}],"termid":"GO:1901310"}


id: MONDO:0700152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from hepatocytes that occurs in dogs.","definition_xrefs":["NCIT:C129298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"},{"relation_name":"is_a","term_name":"liver disorder, non-human animal","termid":"MONDO:1012967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine hepatocellular carcinoma","termid":"MONDO:0700152","xrefs":{"Monarch":{"xref_id":"0700152"}}}


id: GO:0071020
data:
  {"annotated_genes":["SJAG_01214","SJAG_02455"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72903],"is_not":false,"summary":null,"term":"GO:0071020"},{"annotations":[77113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071021"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed following the second splicing event and contains the spliced product, the excised intron, and three snRNPs, including U5.","definition_xrefs":["ISBN:0879695897","ISBN:0879697393","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01214":null,"SJAG_02455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"post-spliceosomal complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mammalian spliceosomal complex C2","type":"narrow"},{"name":"yeast spliceosomal complex A2-3","type":"narrow"}],"termid":"GO:0071020","terms_by_termid":{"GO:0071020":null,"GO:0071021":null}}


id: PBO:0092027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit 8","termid":"PBO:0092027"}


id: GO:0003193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the pulmonary valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"pulmonary valve morphogenesis","termid":"GO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary valve formation","termid":"GO:0003193"}


id: GO:0170003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of heme B from one side of a membrane to the other.","definition_xrefs":["PMID:15369674","PMID:32121449","PMID:20610401","PMID:9657107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transmembrane transporter activity","termid":"GO:0015232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"heme B transmembrane transporter activity","termid":"GO:0170003"}


id: PBO:0050127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 37","termid":"PBO:0050127"}


id: PBO:0054211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1591","termid":"PBO:0054211"}


id: GO:0071294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to zinc ion","termid":"GO:0010043"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to zinc ion","synonyms":[{"name":"cellular response to zinc","type":"exact"}],"termid":"GO:0071294"}


id: MONDO:0009000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial reactive perforating collagenosis is a very rare genetic skin disease characterized by transepidermal elimination of collagen fibers presenting as recurrent spontaneously involuting keratotic papules or nodules.","definition_xrefs":["Orphanet:79147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial reactive perforating collagenosis","secondary_identifiers":["MESH:C565687","OMIM:216700","icd11.foundation:563155724","UMLS:C1857624","GARD:13331","MEDGEN:347504"],"synonyms":[{"name":"RPC","type":"related"},{"name":"collagenosis, familial reactive perforating","type":"related"},{"name":"inherited reactive perforating collagenosis","type":"related"}],"termid":"MONDO:0009000","xrefs":{"Monarch":{"xref_id":"0009000"}}}


id: GO:0032938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation in response to oxidative stress","termid":"GO:0043556"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translation in response to oxidative stress","termid":"GO:0032938"}


id: PR:Q9UTG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pub2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTG2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase pub2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.15c","synonyms":[{"name":"Spom972h-pub2","type":"exact"}],"termid":"PR:Q9UTG2"}


id: GO:0002771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a inhibitory killer cell immunoglobulin-like receptor capable of inhibiting an immune effector process contributing to an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"inhibitory killer cell immunoglobulin-like receptor signaling pathway","synonyms":[{"name":"KIR signaling pathway","type":"exact"},{"name":"inhibitory killer cell immunoglobulin-like receptor signalling pathway","type":"exact"},{"name":"killer cell inhibitory receptor signaling pathway","type":"exact"}],"termid":"GO:0002771"}


id: GO:0015195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-threonine from one side of a membrane to the other. L-threonine is (2R*,3S*)-2-amino-3-hydroxybutanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-threonine transmembrane transporter activity","secondary_identifiers":["GO:0015512"],"synonyms":[{"name":"L-threonine permease activity","type":"related"},{"name":"L-threonine transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"related"}],"termid":"GO:0015195"}


id: PBO:0055115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2534","termid":"PBO:0055115"}


id: PBO:0027784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_threonine_phosphorylation","termid":"PBO:0027784"}


id: PBO:0072436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29","termid":"PBO:0072436"}


id: GO:0061657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of UFM1 from one protein to another via the reaction X-UFM1 + Y = Y-UFM1 + X, where both the X-UFM1 and Y-UFM1 linkages are thioester bonds between the C-terminal amino acid of UFM1 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"},{"relation_name":"is_a","term_name":"UFM1 transferase activity","termid":"GO:0071568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0019787","GO:0016746","GO:0003824","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UFM1 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061657"}


id: GO:0001651
data:
  {"annotated_genes":["SJAG_00259"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88583],"is_not":false,"summary":null,"term":"GO:0001651"}]},"cv_name":"cellular_component","definition":"A structure found in the nucleolus, which contains newly synthesized preribosomal RNA (pre-rRNA) and a collection of proteins.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005730"],"is_obsolete":false,"name":"dense fibrillar component","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1841764412"],"synonyms":[{"name":"pars fibrosa","type":"broad"}],"termid":"GO:0001651","terms_by_termid":{"GO:0001651":null}}


id: MONDO:0017771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spectrum of Mullerian duct anomalies characterized by congenital aplasia of the uterus and upper 2/3 of the vagina in otherwise phenotypically normal females. It can be classified as either MRKH syndrome type 1 (corresponding to isolated utero-vaginal aplasia) or MRKH syndrome type 2 (utero-vaginal aplasia associated with other malformations).","definition_xrefs":["Orphanet:3109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial bilateral aplasia of the mullerian ducts","termid":"MONDO:0015830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mayer-Rokitansky-Kuster-Hauser syndrome","secondary_identifiers":["UMLS:C0431648","MEDGEN:140915","DOID:0112177","GARD:5445","MedDRA:10065148","NCIT:C124853","SCTID:8793008","NORD:1412"],"synonyms":[{"name":"MRKH","type":"exact"},{"name":"MRKH syndrome","type":"exact"},{"name":"Mayer-Rokitansky-Küster-Hauser Syndrome","type":"exact"},{"name":"Mayer-Rokitansky-Küster-Hauser syndrome","type":"related"},{"name":"Mullerian aplasia/dysgenesis","type":"exact"},{"name":"Rokitansky Kuster Hauser syndrome","type":"exact"},{"name":"Rokitansky syndrome","type":"exact"}],"termid":"MONDO:0017771","xrefs":{"Monarch":{"xref_id":"0017771"}}}


id: GO:0004132
data:
  {"annotated_genes":["SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69703],"is_not":false,"summary":null,"term":"GO:0004132"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dCMP + H2O = dUMP + NH3.","definition_xrefs":["EC:3.5.4.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"dCMP deaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DCMP-DEAMINASE-RXN","Reactome:R-HSA-73596","RHEA:22924"],"synonyms":[{"name":"dCMP aminohydrolase activity","type":"related"},{"name":"deoxy-CMP-deaminase activity","type":"related"},{"name":"deoxycytidine monophosphate deaminase activity","type":"related"},{"name":"deoxycytidine-5'-monophosphate aminohydrolase activity","type":"related"},{"name":"deoxycytidine-5'-phosphate deaminase activity","type":"related"},{"name":"deoxycytidylate aminohydrolase activity","type":"related"},{"name":"deoxycytidylate deaminase activity","type":"related"}],"termid":"GO:0004132","terms_by_termid":{"GO:0004132":null}}


id: PBO:0054851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2265","termid":"PBO:0054851"}


id: PBO:0045484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSCAM intronic transcript 1","termid":"PBO:0045484"}


id: GO:0032729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon.","definition_xrefs":["GOC:mah","PMID:15546383","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of type II interferon production","termid":"GO:0032649"},{"relation_name":"positively_regulates","term_name":"type II interferon production","termid":"GO:0032609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of type II interferon production","secondary_identifiers":["GO:1902715","GO:0045078"],"synonyms":[{"name":"activation of interferon-gamma production","type":"narrow"},{"name":"positive regulation of interferon-gamma biosynthetic process","type":"narrow"},{"name":"positive regulation of interferon-gamma production","type":"exact"},{"name":"positive regulation of interferon-gamma secretion","type":"narrow"},{"name":"stimulation of interferon-gamma production","type":"narrow"},{"name":"up regulation of interferon-gamma production","type":"exact"},{"name":"up-regulation of interferon-gamma production","type":"exact"},{"name":"upregulation of interferon-gamma production","type":"exact"}],"termid":"GO:0032729"}


id: PBO:0083231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely within telomere TEL08L","termid":"PBO:0083231"}


id: PBO:0078042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 32","termid":"PBO:0078042"}


id: PR:000027621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 ubiquitinated form in Schizosaccharomyces pombe. Ubiquitinated by SCF(Pof1). Example: UniProtKB:Q10424-1, MOD:01148.","definition_xrefs":["PomBase:MAH","PMID:15660136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zip1 ubiquitinated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"Spom-zip1/UbiqLys+","type":"exact"}],"termid":"PR:000027621"}


id: GO:1901635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of presynaptic active zone structure (obsolete GO:1901635)","synonyms":[{"name":"regulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901635"}


id: PBO:0003769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3g","termid":"PBO:0003769"}


id: PBO:0028946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate-cysteine_ligase_activity","termid":"PBO:0028946"}


