# terms

id: PBO:0066848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 148","termid":"PBO:0066848"}


id: PBO:0066258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 1","termid":"PBO:0066258"}


id: PBO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 5, Pup2 (predicted)","termid":"PBO:0002284"}


id: PBO:0048551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-fructose oxidoreductase domain containing 1","termid":"PBO:0048551"}


id: GO:0014829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in the vascular tissue, whereby actin/myosin complex activity generates force through ATP hydrolysis resulting in a change in smooth muscle geometry. This process is always coupled to chemo-mechanical energy conversion.","definition_xrefs":["GOC:mtg_muscle","MA:0002718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle contraction","synonyms":[{"name":"vascular smooth muscle contraction","type":"exact"}],"termid":"GO:0014829"}


id: PBO:0088787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit G","termid":"PBO:0088787"}


id: GO:0070259
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017005"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphotyrosyl groups formed as covalent intermediates (in DNA backbone breakage) between a DNA topoisomerase and DNA.","definition_xrefs":["PMID:16751265","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070259","terms_by_termid":{"GO:0017005":null}}


id: PBO:0071490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 31","termid":"PBO:0071490"}


id: PBO:0028074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_cut","termid":"PBO:0028074"}


id: PBO:0059054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNX1 antisense RNA 1 (head to head)","termid":"PBO:0059054"}


id: MONDO:0021723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tightness of the vaginal wall during vaginal penetration including sexual intercourse. It is caused by involuntary spasm of the pelvic floor muscles, and results in painful intercourse or failure to have intercourse. It may due to psychological conditions, trauma in the vaginal area, or vaginal infection.","definition_xrefs":["NCIT:C78703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal disorder","termid":"MONDO:0001433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginismus","secondary_identifiers":["MEDGEN:412150","MESH:D052065","ICD10CM:N94.2","UMLS:C2004487"],"synonyms":[{"name":"myalgia of pelvic floor","type":"exact"},{"name":"vaginismus","type":"exact"}],"termid":"MONDO:0021723","xrefs":{"Monarch":{"xref_id":"0021723"}}}


id: GO:0042559
data:
  {"annotated_genes":["SJAG_00529","SJAG_03275","SJAG_01126","SJAG_00815","SJAG_01616","SJAG_02225","SJAG_04156","SJAG_02408","SJAG_03098","SJAG_00106","SJAG_01198","SJAG_03224"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108099,112159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[68140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[112160,105843,108100,57114,104546,60606,68745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[72323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009396"},{"annotations":[69673,108279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"},{"annotations":[60609,105844,79547,57112,70824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[72116,68141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any compound containing pteridine (pyrazino(2,3-dipyrimidine)), e.g. pteroic acid, xanthopterin and folic acid.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00529":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01616":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03098":null,"SJAG_03224":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pteridine-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pteridine and derivative biosynthesis","type":"exact"},{"name":"pteridine and derivative biosynthetic process","type":"exact"},{"name":"pteridine-containing compound anabolism","type":"exact"},{"name":"pteridine-containing compound biosynthesis","type":"exact"},{"name":"pteridine-containing compound formation","type":"exact"},{"name":"pteridine-containing compound synthesis","type":"exact"},{"name":"pterin biosynthesis","type":"narrow"},{"name":"pterin biosynthetic process","type":"narrow"}],"termid":"GO:0042559","terms_by_termid":{"GO:0006729":null,"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0046654":null,"GO:0046656":null,"GO:0046901":null}}


id: MONDO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the penis and is characterized by the presence of a papillary growth pattern.","definition_xrefs":["NCIT:C6983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary squamous carcinoma","termid":"MONDO:0002979"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary carcinoma of the penis","secondary_identifiers":["MEDGEN:235455","DOID:8013","UMLS:C1335322"],"synonyms":[{"name":"papillary carcinoma of penis","type":"exact"},{"name":"papillary carcinoma of the penis","type":"exact"},{"name":"papillary penile carcinoma","type":"exact"},{"name":"papillary penile squamous carcinoma","type":"exact"},{"name":"papillary squamous carcinoma of penis","type":"exact"},{"name":"papillary squamous carcinoma of the penis","type":"exact"},{"name":"penis papillary carcinoma","type":"exact"},{"name":"squamous carcinoma of penis, papillary type","type":"exact"},{"name":"squamous carcinoma of the penis, papillary type","type":"exact"}],"termid":"MONDO:0004433","xrefs":{"Monarch":{"xref_id":"0004433"}}}


id: PBO:0052711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 3","termid":"PBO:0052711"}


id: MONDO:0010188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ataxia with vitamin E deficiency (AVED) is a neurodegenerative disease belonging to the inherited cerebellar ataxias. It is mainly characterized by progressive spino-cerebellar ataxia, loss of proprioception, areflexia, and is associated with a marked deficiency in vitamin E.","definition_xrefs":["Orphanet:96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005244","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"familial isolated deficiency of vitamin E","secondary_identifiers":["MEDGEN:341248","ICD9:269.1","MedDRA:10047631","UMLS:C1848533","MESH:C535393","OMIM:277460","DOID:0090028","GARD:8595","ICD9:334.3","NANDO:1200050","NORD:817","SCTID:702442008"],"synonyms":[{"name":"AVED","type":"exact"},{"name":"Ataxia with Vitamin E Deficiency","type":"exact"},{"name":"Friedreich-like ataxia","type":"exact"},{"name":"Friedreich-like ataxia with selective vitamin E deficiency","type":"related"},{"name":"VED","type":"related"},{"name":"ataxia with isolated vitamin E deficiency","type":"exact"},{"name":"ataxia with vitamin E deficiency","type":"related"},{"name":"ataxia, Friedreich-like, with selective vitamin E deficiency","type":"related"},{"name":"familial isolated deficiency of vitamin type E","type":"exact"},{"name":"familial isolated vitamin E deficiency","type":"exact"},{"name":"isolated vitamin E deficiency","type":"exact"},{"name":"vitamin E, familial isolated deficiency OF","type":"related"}],"termid":"MONDO:0010188","xrefs":{"Monarch":{"xref_id":"0010188"}}}


id: PBO:0040808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD cargo adaptor 1","termid":"PBO:0040808"}


id: MONDO:0015110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of cardiac rhythm disease that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic cardiac rhythm disease (obsolete MONDO:0015110)","secondary_identifiers":["Orphanet:101934"],"synonyms":[{"name":"genetic cardiac rhythm disease","type":"exact"}],"termid":"MONDO:0015110","xrefs":{"Monarch":{"xref_id":"0015110"}}}


id: MONDO:0019994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 13 is an uniparental disomy of maternal origin that most likely do not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only mother is a carrier.","definition_xrefs":["Orphanet:97678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 13 disorder","termid":"MONDO:0700020"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 13","secondary_identifiers":["icd11.foundation:729188840","UMLS:C4722325","GARD:19382","MEDGEN:1656812"],"synonyms":[{"name":"UPD(13)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 13","type":"exact"}],"termid":"MONDO:0019994","xrefs":{"Monarch":{"xref_id":"0019994"}}}


id: PBO:0067677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 862, pseudogene","termid":"PBO:0067677"}


id: MONDO:0009575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thiamine-responsive megaloblastic anemia (TRMA) is characterized by a triad of megaloblastic anemia, non-type I diabetes mellitus, and sensorineural deafness.","definition_xrefs":["Orphanet:49827"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"thiamine-responsive dysfunction syndrome","termid":"MONDO:0000152"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"vitamin B12- and folate-independent constitutional megaloblastic anemia","termid":"MONDO:0020112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"thiamine-responsive megaloblastic anemia syndrome","secondary_identifiers":["SCTID:237617006","MEDGEN:83338","GARD:9210","OMIM:249270","DOID:0090117","MESH:C536510","UMLS:C0342287"],"synonyms":[{"name":"Rogers syndrome","type":"exact"},{"name":"THMD1","type":"exact"},{"name":"TRMA","type":"exact"},{"name":"megaloblastic Anemia, thiamine-responsive, with diabetes mellitus and sensorineural deafness","type":"related"},{"name":"megaloblastic anaemia thiamine-responsive with diabetes mellitus and sensorineural deafness","type":"related"},{"name":"megaloblastic anemia thiamine-responsive with diabetes mellitus and sensorineural deafness","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 1","type":"exact"},{"name":"thiamine metabolism dysfunction syndrome 1 (megaloblastic Anemia, diabetes mellitus, and deafness type)","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 1 (megaloblastic anemia, diabetes mellitus and deafness type)","type":"exact"},{"name":"thiamine responsive megaloblastic anaemia syndrome","type":"related"},{"name":"thiamine responsive megaloblastic anemia syndrome","type":"related"},{"name":"thiamine-responsive Anaemia syndrome","type":"related"},{"name":"thiamine-responsive Anemia syndrome","type":"related"},{"name":"thiamine-responsive anaemia syndrome","type":"exact"},{"name":"thiamine-responsive anemia syndrome","type":"exact"},{"name":"thiamine-responsive megaloblastic anaemia with diabetes mellitus and sensorineural deafness","type":"exact"},{"name":"thiamine-responsive megaloblastic anemia syndrome","type":"exact"},{"name":"thiamine-responsive megaloblastic anemia with diabetes mellitus and sensorineural deafness","type":"exact"},{"name":"thiamine-responsive myelodysplasia","type":"exact"}],"termid":"MONDO:0009575","xrefs":{"Monarch":{"xref_id":"0009575"}}}


id: GO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimeric protein complex having creatine kinase activity.","definition_xrefs":["PMID:173175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine kinase complex","termid":"GO:0002185"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytosolic creatine kinase complex","termid":"GO:0002186"}


id: MONDO:0009694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"myeloperoxidase deficiency","secondary_identifiers":["Orphanet:2587","UMLS:C0398595","icd11.foundation:1933575033","MEDGEN:96015","MESH:C562864","NANDO:1200358","NANDO:2200758","SCTID:234433009","GARD:3868","ICD9:288.8","OMIM:254600"],"synonyms":[{"name":"MPO deficiency","type":"exact"},{"name":"MPOD","type":"related"},{"name":"myeloperoxidase deficiency","type":"exact"}],"termid":"MONDO:0009694","xrefs":{"Monarch":{"xref_id":"0009694"}}}


id: PBO:0070490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 25","termid":"PBO:0070490"}


id: PBO:0047506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FER1L6 antisense RNA 1","termid":"PBO:0047506"}


id: GO:0033956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-[beta-D-apiofuranosyl-(1->6)-beta-D-glucopyranosyloxy]isoflavonoid + H2O = a 7-hydroxyisoflavonoid + beta-D-apiofuranosyl-(1->6)-D-glucose.","definition_xrefs":["EC:3.2.1.161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"beta-apiosyl-beta-glucosidase activity","secondary_identifiers":["RHEA:21488","MetaCyc:RXN-9156"],"synonyms":[{"name":"7-[beta-D-apiofuranosyl-(1->6)-beta-D-glucopyranosyloxy]isoflavonoid beta-D-apiofuranosyl-(1->6)-D-glucohydrolase activity","type":"related"},{"name":"furcatin hydrolase activity","type":"related"},{"name":"isoflavonoid 7-O-beta-apiosyl-glucoside beta-glucosidase activity","type":"related"},{"name":"isoflavonoid-7-O-beta[D-apiosyl-(1->6)-beta-D-glucoside] disaccharidase activity","type":"related"}],"termid":"GO:0033956"}


id: PBO:0057071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 151b","termid":"PBO:0057071"}


id: PBO:0117123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM29 antisense RNA 1","termid":"PBO:0117123"}


id: MONDO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lower than normal levels of phosphates in the circulating blood.","definition_xrefs":["NCIT:C37977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolism disease","termid":"MONDO:0002319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypophosphatemia","secondary_identifiers":["DOID:0050336","HP:0002148","MEDGEN:39327","MESH:D017674","SCTID:4996001","UMLS:C0085682"],"synonyms":[{"name":"hypophosphatemia","type":"exact"},{"name":"hypophosphatemia (disease)","type":"exact"}],"termid":"MONDO:0000313","xrefs":{"Monarch":{"xref_id":"0000313"}}}


id: PBO:0030812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_anisomycin","termid":"PBO:0030812"}


id: GO:1904903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an ESCRT III complex into its constituent components.","definition_xrefs":["GOC:PARL","GOC:pad","GOC:TermGenie","GO_REF:0000079","PMID:20588296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex disassembly","termid":"GO:1904896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ESCRT III complex disassembly","termid":"GO:1904903"}


id: PBO:0049205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor kainate type subunit 5","termid":"PBO:0049205"}


id: PBO:0036412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase, implicated in chromosome segregation","termid":"PBO:0036412"}


id: MONDO:0003117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of psychiatric disorders which are characterized by the presence of physical symptoms that suggest a medical condition but are not fully explained by any known medical reasons.","definition_xrefs":["NCIT:C34956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatoform disorder","secondary_identifiers":["ICD9:300.81","SCTID:31297008","ICD9:306.8","MEDGEN:20835","UMLS:C0037650","DOID:4737","ICD9:300.8","MESH:D013001","EFO:0009687"],"synonyms":[{"name":"physiological malfunction arising from mental factor","type":"related"},{"name":"psychophysiologic disorder","type":"related"},{"name":"psychosomatic disorder","type":"related"},{"name":"somatoform disorder","type":"exact"}],"termid":"MONDO:0003117","xrefs":{"Monarch":{"xref_id":"0003117"}}}


id: MOD:01768
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a palmitoleyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"palmitoleylated residue","termid":"MOD:01423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-palmitoleylated residue","termid":"MOD:01768"}


id: GO:0060961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of phospholipase D.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase inhibitor activity","termid":"GO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0004857","GO:0140678","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"phospholipase D inhibitor activity","termid":"GO:0060961"}


id: GO:0039627
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=147 symmetry. T=147 icosahedral capsid is composed of 12 pentameric and 1460 hexameric capsomeres for a total of 8820 capsid proteins.","definition_xrefs":["GOC:plm","UniProtKB-KW:KW-0167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=147 icosahedral capsid","termid":"GO:0039627"}


id: GO:0050084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + H2O = D-mannitol + 2 H+ + phosphate.","definition_xrefs":["EC:3.1.3.22","RHEA:19537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"mannitol-1-phosphatase activity","secondary_identifiers":["MetaCyc:MANNITOL-1-PHOSPHATASE-RXN","KEGG_REACTION:R02167"],"synonyms":[{"name":"D-mannitol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"mannitol-1-phosphate phosphatase activity","type":"related"}],"termid":"GO:0050084"}


id: MONDO:1011220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corneal dystrophy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal dystrophy, non-human animal","termid":"MONDO:1010320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal dystrophy, domestic cat","secondary_identifiers":["OMIA:000230-9685"],"termid":"MONDO:1011220","xrefs":{"Monarch":{"xref_id":"1011220"}}}


id: PBO:0031240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_establishment_or_maintenance_of_cell_polarity","termid":"PBO:0031240"}


id: PBO:0074444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 45","termid":"PBO:0074444"}


id: MONDO:0018247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CADDS is a rare, genetic, neurometabolic disease characterized by severe intrauterine growth retardation, failure to thrive, profound neonatal hypotonia, severe global development delay, elevated very long chain fatty acids in plasma, and neonatal cholestasis leading to hepatic failure and death. Other features include ocular abnormalities (e.g. blindness and cataracts), sensorineural deafness, seizures, and abnormal brain morphology (notably delayed CNS myelination and ventriculomegaly).","definition_xrefs":["Orphanet:369942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"peroxisomal disease","termid":"MONDO:0019053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0005559"],"is_obsolete":false,"name":"CADDS","secondary_identifiers":["GARD:12472"],"synonyms":[{"name":"CADDS","type":"exact"},{"name":"Zellweger-like contiguous gene deletion syndrome","type":"exact"},{"name":"contiguous ABCD1 DXS1357E deletion syndrome","type":"exact"}],"termid":"MONDO:0018247","xrefs":{"Monarch":{"xref_id":"0018247"}}}


id: GO:1904364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcitonin secretion.","definition_xrefs":["PMID:11278900","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"is_a","term_name":"regulation of calcitonin secretion","termid":"GO:1904362"},{"relation_name":"positively_regulates","term_name":"calcitonin secretion","termid":"GO:0036161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of calcitonin secretion","synonyms":[{"name":"activation of calcitonin secretion","type":"narrow"},{"name":"up regulation of calcitonin secretion","type":"exact"},{"name":"up-regulation of calcitonin secretion","type":"exact"},{"name":"upregulation of calcitonin secretion","type":"exact"}],"termid":"GO:1904364"}


id: GO:0004755
data:
  {"annotated_genes":["SJAG_01061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109446],"is_not":false,"summary":null,"term":"GO:0004755"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-saccharopine + H2O + NADP+ = L-allysine + L-glutamate + H+ + NADPH.","definition_xrefs":["RHEA:10020","EC:1.5.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saccharopine dehydrogenase activity","termid":"GO:0004753"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"saccharopine dehydrogenase (NADP+, L-glutamate-forming) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02315","MetaCyc:RXN3O-127"],"synonyms":[{"name":"6-N-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-glutamate-forming)","type":"related"},{"name":"N6-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-glutamate-forming)","type":"related"},{"name":"aminoadipate semialdehyde-glutamate reductase activity","type":"related"},{"name":"aminoadipic semialdehyde-glutamate reductase activity","type":"related"},{"name":"aminoadipic semialdehyde-glutamic reductase activity","type":"related"},{"name":"epsilon-N-(L-glutaryl-2)-L-lysine:NAD+(P) oxidoreductase (L-2-aminoadipate-semialdehyde forming)","type":"related"},{"name":"saccharopine (nicotinamide adenine dinucleotide phosphate, glutamate-forming) dehydrogenase activity","type":"related"},{"name":"saccharopine reductase activity","type":"related"}],"termid":"GO:0004755","terms_by_termid":{"GO:0004755":null}}


id: MONDO:0013908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thyrotoxic periodic paralysis","termid":"MONDO:0019201"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotoxic periodic paralysis, susceptibility to, 3","secondary_identifiers":["UMLS:C3553839","MEDGEN:766753","OMIM:614834"],"synonyms":[{"name":"TTPP3","type":"exact"},{"name":"thyrotoxic periodic paralysis, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0013908","xrefs":{"Monarch":{"xref_id":"0013908"}}}


id: MONDO:0014590
data:
  {"annotated_genes":["SJAG_00826"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85023],"is_not":false,"summary":null,"term":"MONDO:0014590"}]},"cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the SNAP25 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00826":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:906793","GARD:16091","DOID:0110683","UMLS:C4225364","OMIM:616330"],"synonyms":[{"name":"CMS18","type":"exact"},{"name":"SNAP25 congenital myasthenic syndrome","type":"exact"},{"name":"SNAP25-DEE","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in SNAP25","type":"exact"},{"name":"congenital myasthenic syndrome type 18","type":"exact"},{"name":"myasthenic syndrome, congenital, 18","type":"exact"},{"name":"myasthenic syndrome, congenital, 18, with intellectual disability and ataxia","type":"exact"},{"name":"myasthenic syndrome, congenital, type 18","type":"exact"}],"termid":"MONDO:0014590","terms_by_termid":{"MONDO:0014590":null},"xrefs":{"Monarch":{"xref_id":"0014590"}}}


id: PBO:0075322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 2","termid":"PBO:0075322"}


id: PBO:0075076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 126","termid":"PBO:0075076"}


id: MONDO:0005630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by suppurative and granulomatous lesions in the respiratory tract, upper alimentary tract, skin, kidneys, joints, and other tissues. Actinobacillus lignieresii infects cattle and sheep while A. equuli infects horses and pigs.","definition_xrefs":["MESH:D000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"Actinobacillus infectious disease, non-human animal","termid":"MONDO:0700059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinobacillosis","secondary_identifiers":["DOID:4974","SCTID:16140007"],"termid":"MONDO:0005630","xrefs":{"Monarch":{"xref_id":"0005630"}}}


id: SO:0001380
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_isopentenylaminomethyl_uridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_isopentenylaminomethyl_uridine","secondary_identifiers":["RNAMOD:103"],"synonyms":[{"name":"5-(isopentenylaminomethyl)uridine","type":"exact"},{"name":"five isopentenylaminomethyl uridine","type":"exact"},{"name":"inm5U","type":"exact"}],"termid":"SO:0001380"}


id: MONDO:0001297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute compression of the heart caused by increased intrapericardial pressure due to the collection of blood or fluid in the pericardium from rupture of the heart, penetrating trauma, or progressive effusion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericardial effusion","termid":"MONDO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac tamponade","secondary_identifiers":["NCIT:C50481","UMLS:C0007177","MESH:D002305","icd11.foundation:216782575","MEDGEN:40108","ICD9:423.3","DOID:115","EFO:1001285","ICD10CM:I31.4","SCTID:35304003"],"synonyms":[{"name":"pericardial tamponade","type":"exact"},{"name":"rose's tamponade","type":"exact"}],"termid":"MONDO:0001297","xrefs":{"Monarch":{"xref_id":"0001297"}}}


id: PR:O59783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC320.06 gene.","definition_xrefs":["UniProtKB:O59783","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C320.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.06","synonyms":[{"name":"Spom972h-SPCC320.06","type":"exact"}],"termid":"PR:O59783"}


id: MONDO:0026426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X inactivation, familial skewed","termid":"MONDO:0100209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X inactivation, familial skewed, 2","secondary_identifiers":["MEDGEN:335376","OMIM:300179","UMLS:C1846257","MESH:C564572"],"synonyms":[{"name":"SXI2","type":"related"},{"name":"X INACTIVATION, FAMILIAL SKEWED, 2","type":"related"},{"name":"X-inactivation, familial skewed, 2","type":"exact"}],"termid":"MONDO:0026426","xrefs":{"Monarch":{"xref_id":"0026426"}}}


id: GO:1902876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic pattern specification.","definition_xrefs":["PMID:16872597","GOC:TermGenie","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of embryonic pattern specification","termid":"GO:1902875"},{"relation_name":"negatively_regulates","term_name":"embryonic pattern specification","termid":"GO:0009880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic pattern specification","synonyms":[{"name":"down regulation of embryonic pattern specification","type":"exact"},{"name":"down regulation of ventral/lateral system","type":"related"},{"name":"down-regulation of embryonic pattern specification","type":"exact"},{"name":"down-regulation of ventral/lateral system","type":"related"},{"name":"downregulation of embryonic pattern specification","type":"exact"},{"name":"downregulation of ventral/lateral system","type":"related"},{"name":"inhibition of embryonic pattern specification","type":"narrow"},{"name":"inhibition of ventral/lateral system","type":"related"},{"name":"negative regulation of ventral/lateral system","type":"related"}],"termid":"GO:1902876"}


id: PBO:0057331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520f","termid":"PBO:0057331"}


id: PBO:0039039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL1 antisense RNA 1","termid":"PBO:0039039"}


id: MONDO:0800502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of conditions characterized by age-dependent occurrence in otherwise normal children. Cognition and neurological evaluation are typically normal. Remission occurs in almost all patients by puberty. Presumed genetic factors have an important role. Seizure semiology and electroencephalographic (EEG) features are specific for each of the syndromes included in this group.","definition_xrefs":["PMID:35503717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal epilepsy","termid":"MONDO:0005384"},{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"childhood-onset self-limited focal epilepsy syndrome","synonyms":[{"name":"childhood-onset SeLFE","type":"exact"}],"termid":"MONDO:0800502","xrefs":{"Monarch":{"xref_id":"0800502"}}}


id: PBO:0043506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 1","termid":"PBO:0043506"}


id: FYPO:0001852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level during cellular response to iron ion starvation","termid":"FYPO:0002042"},{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"decreased transcription during iron starvation","synonyms":[{"name":"decreased transcription during iron depletion","type":"exact"},{"name":"decreased transcription during iron deprivation","type":"exact"},{"name":"decreased transcription during iron ion starvation","type":"exact"},{"name":"decreased transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"decreased transcription during iron starvation during vegetative growth","type":"exact"},{"name":"reduced transcription during iron starvation","type":"exact"}],"termid":"FYPO:0001852"}


id: GO:0047058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2-methyl-3-phytyl-2,3-dihydronaphthoquinone + oxidized dithiothreitol + H2O = 2,3-epoxy-2,3-dihydro-2-methyl-3-phytyl-1,4-naphthoquinone + 1,4-dithiothreitol.","definition_xrefs":["RHEA:21560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","termid":"GO:0016728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"vitamin-K-epoxide reductase (warfarin-insensitive) activity","secondary_identifiers":["MetaCyc:1.1.4.2-RXN","EC:1.17.4.5"],"synonyms":[{"name":"vitamin K 2,3-epoxide reductase activity","type":"related"}],"termid":"GO:0047058"}


id: GO:0140733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a tRNA ligase.","definition_xrefs":["PMID:30943413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"ligase regulator activity","termid":"GO:0055103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"tRNA ligase activator activity","termid":"GO:0140733"}


id: PBO:0075787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 9","termid":"PBO:0075787"}


id: PBO:0005091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S8 (predicted)","termid":"PBO:0005091"}


id: PBO:0053729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 943","termid":"PBO:0053729"}


id: PBO:0088749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc1","termid":"PBO:0088749"}


id: MONDO:0975796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 93, autosomal recessive","secondary_identifiers":["OMIM:620938"],"termid":"MONDO:0975796","xrefs":{"Monarch":{"xref_id":"0975796"}}}


id: FYPO:0000904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization or depolymerization, by the addition or removal of tubulin dimers respectively, occurs to a lesser extent than normal. Microtubules are thus less dynamic than normal.","definition_xrefs":["PomBase:mah","GO:0031109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased microtubule polymerization or depolymerization","synonyms":[{"name":"decreased microtubule dynamicity","type":"related"},{"name":"decreased microtubule growth or shrinkage","type":"related"},{"name":"decreased microtubule polymerisation or depolymerisation","type":"exact"},{"name":"decreased microtubule polymerization or depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule polymerization or depolymerization during vegetative growth","type":"exact"},{"name":"reduced microtubule polymerization or depolymerization","type":"exact"}],"termid":"FYPO:0000904"}


id: GO:0016769
data:
  {"annotated_genes":["SJAG_00673","SJAG_03434","SJAG_02791","SJAG_03292","SJAG_04988","SJAG_00495","SJAG_03961","SJAG_04149","SJAG_04728","SJAG_00714","SJAG_03672","SJAG_01019","SJAG_03306","SJAG_04145","SJAG_02408","SJAG_03312","SJAG_04678","SJAG_03055"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99146,72298,76371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047536"},{"annotations":[72780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046820"},{"annotations":[56990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034386"},{"annotations":[76009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004015"},{"annotations":[78107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004360"},{"annotations":[75050,87200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003923"},{"annotations":[57837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004400"},{"annotations":[73582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016212"},{"annotations":[110984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004021"},{"annotations":[70675,77395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004069"},{"annotations":[110187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052656"},{"annotations":[110188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052654"},{"annotations":[98105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080130"},{"annotations":[98106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004838"},{"annotations":[110189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052655"},{"annotations":[62350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003992"},{"annotations":[79360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004648"},{"annotations":[78081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004587"},{"annotations":[95535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008483"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor).","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00673":null,"SJAG_00714":null,"SJAG_01019":null,"SJAG_02408":null,"SJAG_02791":null,"SJAG_03055":null,"SJAG_03292":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03672":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04678":null,"SJAG_04728":null,"SJAG_04988":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"transferase activity, transferring nitrogenous groups","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.6.-.-"],"synonyms":[{"name":"transferase activity, transferring other nitrogenous groups","type":"narrow"}],"termid":"GO:0016769","terms_by_termid":{"GO:0003923":null,"GO:0003992":null,"GO:0004015":null,"GO:0004021":null,"GO:0004069":null,"GO:0004360":null,"GO:0004400":null,"GO:0004587":null,"GO:0004648":null,"GO:0004838":null,"GO:0008483":null,"GO:0016212":null,"GO:0034386":null,"GO:0046820":null,"GO:0047536":null,"GO:0052654":null,"GO:0052655":null,"GO:0052656":null,"GO:0080130":null}}


id: GO:1905354
data:
  {"annotated_genes":["SJAG_02808","SJAG_04084","SJAG_06586","SJAG_01431","SJAG_00966","SJAG_04321","SJAG_03179","SJAG_03745","SJAG_02374","SJAG_04818","SJAG_02275","SJAG_04824","SJAG_01521","SJAG_01910","SJAG_01818","SJAG_04153","SJAG_04006","SJAG_03789","SJAG_01191","SJAG_01581","SJAG_00854","SJAG_02991"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74871,72991,115619,71381,74383,72185,75963,77311,71017,74229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000177"},{"annotations":[94716,64370,91457,118292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[70508,114172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045025"},{"annotations":[71016,115181,74870,73059,74382,75962,72990,72184,77310,71380,70467,100789,74228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000176"},{"annotations":[77402,70114,78752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031251"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of exoribonuclease activity.","definition_xrefs":["PMID:17174896","GOC:TermGenie","GO_REF:0000088","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_00966":null,"SJAG_01191":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01581":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02808":null,"SJAG_02991":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exoribonuclease complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1905354","terms_by_termid":{"GO:0000176":null,"GO:0000177":null,"GO:0031251":null,"GO:0045025":null,"GO:0090730":null}}


id: GO:0009133
data:
  {"annotated_genes":["SJAG_02038","SJAG_04665","SJAG_00885","SJAG_04657","SJAG_02874","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[80200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[95244,92201,107013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[80199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_02038":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside diphosphate anabolism","type":"exact"},{"name":"nucleoside diphosphate biosynthesis","type":"exact"},{"name":"nucleoside diphosphate formation","type":"exact"},{"name":"nucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009133","terms_by_termid":{"GO:0006172":null,"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0046705":null}}


id: PBO:0072781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 activating enzyme subunit 1","termid":"PBO:0072781"}


id: FYECO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where glycerol is the main carbon source, but the medium also contained trace amounts of glucose (<0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol MM with trace glucose","synonyms":[{"name":"glycerol main carbon source + very low glucose MM","type":"exact"},{"name":"glycerol minimal medium with trace glucose","type":"exact"}],"termid":"FYECO:0000072"}


id: RO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and l when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that is aligned_with l ","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"RO:0002337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_transport_along","termid":"RO:0002341"}


id: MONDO:0012444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"PLA2G6-associated neurodegeneration","termid":"MONDO:0017998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 2B","secondary_identifiers":["MEDGEN:346658","UMLS:C1857747","OMIM:610217","DOID:0110736","GARD:10688","NANDO:1200538"],"synonyms":[{"name":"Karak syndrome","type":"related"},{"name":"NBIA2B","type":"exact"},{"name":"NBIA2b","type":"exact"},{"name":"atypical neuroaxonal dystrophy","type":"related"},{"name":"early-onset progressive cerebellar ataxia dystonia spasticity and intellectual decline","type":"related"},{"name":"neuroaxonal dystrophy, atypical","type":"exact"},{"name":"neurodegeneration with brain iron accumulation 2B","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 2B","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 2b","type":"exact"},{"name":"neurodegeneration with brain iron accumulation, Pla2G6-related","type":"related"},{"name":"neurodegeneration with brain iron accumulation, Pla2g6-related","type":"exact"}],"termid":"MONDO:0012444","xrefs":{"Monarch":{"xref_id":"0012444"}}}


id: MONDO:0700244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by variants in the CACNA2D4 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"CACNA2D4-related retinopathy","synonyms":[{"name":"CACNA2D4-related retinopathy","type":"exact"}],"termid":"MONDO:0700244","xrefs":{"Monarch":{"xref_id":"0700244"}}}


id: PBO:0018125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase Mdh1 (predicted)","termid":"PBO:0018125"}


id: PBO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Rum1","termid":"PBO:0004211"}


id: PBO:0066951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 253","termid":"PBO:0066951"}


id: PBO:0076254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic vesicle glycoprotein 2C","termid":"PBO:0076254"}


id: FYPO:0004351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during a cellular response to methylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nucleus during cellular response to methylglyoxal","synonyms":[{"name":"increased protein localisation to nucleus during cellular response to methylglyoxal","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleus during cellular response to methylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0004351"}


id: PBO:0054361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1754","termid":"PBO:0054361"}


id: PR:O74913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C757.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.02c","synonyms":[{"name":"Spom972h-SPCC757.02c","type":"exact"}],"termid":"PR:O74913"}


id: MONDO:0009262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM1 gangliosidosis type 3 is a mild, chronic, adult form of GM1 gangliosidosis characterized by onset generally during childhood or adolescence and by cerebellar dysfunction.","definition_xrefs":["Orphanet:79257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GM1 gangliosidosis","termid":"MONDO:0018149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0005328","MONDO:0002561"],"is_obsolete":false,"name":"GM1 gangliosidosis type 3","secondary_identifiers":["SCTID:238027003","GARD:2431","MEDGEN:78655","OMIM:230650","UMLS:C0268273","NANDO:2201198","DOID:0080489","icd11.foundation:1331496842","NANDO:1200069"],"synonyms":[{"name":"Beta-galactosidase deficiency type 3","type":"related"},{"name":"GM1-gangliosidosis, type 3","type":"related"},{"name":"GM1-gangliosidosis, type III","type":"related"},{"name":"adult GM1 gangliosidosis","type":"related"},{"name":"adult-onset GM1 gangliosidosis","type":"exact"},{"name":"gangliosidosis GM1 type 3","type":"related"},{"name":"gangliosidosis generalised GM1 chronic type","type":"related"},{"name":"gangliosidosis generalized GM1 chronic type","type":"related"},{"name":"gangliosidosis, generalised GM1, adult type","type":"related"},{"name":"gangliosidosis, generalised GM1, chronic type","type":"related"},{"name":"gangliosidosis, generalised GM1, type 3","type":"related"},{"name":"gangliosidosis, generalized GM1, adult type","type":"related"},{"name":"gangliosidosis, generalized GM1, chronic type","type":"related"},{"name":"gangliosidosis, generalized GM1, type 3","type":"related"}],"termid":"MONDO:0009262","xrefs":{"Monarch":{"xref_id":"0009262"}}}


id: PBO:0058762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6886","termid":"PBO:0058762"}


id: GO:0009950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral axis specification","synonyms":[{"name":"dorsal-ventral axis specification","type":"exact"},{"name":"dorsal/ventral axis determination","type":"related"},{"name":"dorsoventral axis specification","type":"exact"}],"termid":"GO:0009950"}


id: FYPO:0001449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular trehalose level","synonyms":[{"name":"normal cellular trehalose accumulation","type":"related"},{"name":"normal cellular trehalose level during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during vegetative growth","type":"exact"}],"termid":"FYPO:0001449"}


id: PBO:0058261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4639","termid":"PBO:0058261"}


id: PBO:0056219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member C2","termid":"PBO:0056219"}


id: GO:0032199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of DNA from an RNA transposon intermediate.","definition_xrefs":["GOC:txnOH","ISBN:1555812090","GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete reverse transcription involved in RNA-mediated transposition (obsolete GO:0032199)","synonyms":[{"name":"reverse transcription during retrotransposition","type":"exact"}],"termid":"GO:0032199"}


id: GO:0047298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-amino-2-methylpropanoate + 2-oxoglutarate = 2-methyl-3-oxopropanoate + L-glutamate.","definition_xrefs":["RHEA:13993","EC:2.6.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"(S)-3-amino-2-methylpropionate transaminase activity","secondary_identifiers":["KEGG_REACTION:R04188","MetaCyc:2.6.1.22-RXN"],"synonyms":[{"name":"(S)-3-amino-2-methylpropanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"(S)-3-amino-2-methylpropionate aminotransferase activity","type":"exact"},{"name":"L-3-aminoisobutyrate aminotransferase activity","type":"related"},{"name":"L-3-aminoisobutyrate transaminase activity","type":"related"},{"name":"L-3-aminoisobutyric aminotransferase activity","type":"related"},{"name":"L-AIBAT activity","type":"related"},{"name":"beta-aminobutyric transaminase activity","type":"related"},{"name":"beta-aminoisobutyrate-alpha-ketoglutarate transaminase activity","type":"related"}],"termid":"GO:0047298"}


id: PR:O14095
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin domain-containing protein 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01642","PANTHER:PTHR21148:SF11","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein plp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.12c","secondary_identifiers":["UniProtKB:O14095"],"synonyms":[{"name":"Spom972h-TXNDC9","type":"exact"},{"name":"phosducin-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14095"}


id: PBO:0074056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 35","termid":"PBO:0074056"}


id: PBO:0039622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A5","termid":"PBO:0039622"}


id: MONDO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma, often supratentorial in location, characterized by the presence of ependymal cells with a perinuclear halo.","definition_xrefs":["NCIT:C4714"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete benign ependymoma (obsolete MONDO:0003161)","termid":"MONDO:0003161"},{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell ependymoma","secondary_identifiers":["DOID:5507","ONCOTREE:CCE","UMLS:C5848299","MEDGEN:1852795"],"synonyms":[{"name":"clear cell ependymoma","type":"exact"}],"termid":"MONDO:0003476","xrefs":{"Monarch":{"xref_id":"0003476"}}}


id: PBO:0041719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin 4, pseudogene","termid":"PBO:0041719"}


id: PBO:0047816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXN3 antisense RNA 2","termid":"PBO:0047816"}


id: GO:1900851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pseurotin A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of pseurotin A biosynthetic process","termid":"GO:1900849"},{"relation_name":"positively_regulates","term_name":"pseurotin A biosynthetic process","termid":"GO:1900790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pseurotin A biosynthetic process","synonyms":[{"name":"up regulation of pseurotin A biosynthetic process","type":"exact"},{"name":"up-regulation of pseurotin A biosynthetic process","type":"exact"},{"name":"upregulation of pseurotin A biosynthetic process","type":"exact"}],"termid":"GO:1900851"}


id: MONDO:1010712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trimethylaminuria (fishy taint) that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylaminuria (fishy taint), non-human animal","termid":"MONDO:1010104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylaminuria (fishy taint), cattle","secondary_identifiers":["OMIA:001360-9913"],"termid":"MONDO:1010712","xrefs":{"Monarch":{"xref_id":"1010712"}}}


id: PBO:0028506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaerobic_cell_population_growth","termid":"PBO:0028506"}


id: FYPO:0004757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal. May result in re-replication of all or part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation","synonyms":[{"name":"DNA re-replication","type":"related"},{"name":"DNA replication defects, endoreduplication","type":"related"},{"name":"DNA rereplication","type":"related"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0004757"}


id: MONDO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infratentorial cancer","termid":"MONDO:0003107"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervicomedullary junction neoplasm","secondary_identifiers":["NCIT:C5423","UMLS:C1332923","MEDGEN:272453","DOID:4707"],"synonyms":[{"name":"cervicomedullary junction neoplasms","type":"exact"},{"name":"cervicomedullary junction tumor","type":"exact"},{"name":"cervicomedullary junction tumour","type":"exact"},{"name":"neoplasm of cervicomedullary junction","type":"exact"},{"name":"neoplasm of the cervicomedullary junction","type":"exact"},{"name":"tumor of cervicomedullary junction","type":"exact"},{"name":"tumor of the cervicomedullary junction","type":"exact"},{"name":"tumour of cervicomedullary junction","type":"exact"},{"name":"tumour of the cervicomedullary junction","type":"exact"}],"termid":"MONDO:0003108","xrefs":{"Monarch":{"xref_id":"0003108"}}}


id: GO:0098916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from pre to post-synapse, across the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"anterograde trans-synaptic signaling","termid":"GO:0098916"}


id: PBO:0085673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in phospholipid flippase function; null allele suppresses growth and membrane trafficking defects associated with all flippase null alleles; proposed function as a phospholipid scramblase that reduces membrane asymmetry; PQ loop family member; localizes to the endosome and trans-Golgi network; non-essential gene","termid":"PBO:0085673"}


id: PR:O14049
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01779","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S8-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.16c","secondary_identifiers":["UniProtKB:O14049"],"synonyms":[{"name":"Spom972h-RPS8","type":"exact"}],"termid":"PR:O14049"}


id: MONDO:0008164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 1","secondary_identifiers":["DOID:0060920","MEDGEN:1639517","OMIM:166800","UMLS:C4551901"],"synonyms":[{"name":"OTS","type":"related"},{"name":"OTSC1","type":"exact"},{"name":"otosclerosis 1","type":"exact"}],"termid":"MONDO:0008164","xrefs":{"Monarch":{"xref_id":"0008164"}}}


id: RO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of developmentally preceded by","direct_ancestors":[{"relation_name":"is_a","term_name":"has_developmental_potential_involving","termid":"RO:0002384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_succeeded_by","termid":"RO:0002286"}


id: PBO:0042363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD160 molecule","termid":"PBO:0042363"}


id: FYPO:0005311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"normal histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K4me during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K4 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005311"}


id: FYPO:0002736
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[118846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[119130,119132,119131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not proceed normally through a specific mitotic cell cycle phase. A mitotic cell cycle phase is any of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GO:0022403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"},{"relation_name":"is_a","term_name":"abnormal cell cycle phase","termid":"FYPO:0002735"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":5,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"abnormal mitotic cell cycle phase","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_03351","SJAG_04284","SJAG_03575"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0002736","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: MONDO:0005394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tissue necrosis in any area of the brain, including the cerebral hemispheres, the cerebellum, and the brain stem. Brain infarction is the result of a cascade of events initiated by inadequate blood flow through the brain that is followed by hypoxia and hypoglycemia in brain tissue. Damage may be temporary, permanent, selective or pan-necrosis.","definition_xrefs":["MESH:D020520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain infarction","secondary_identifiers":["DOID:3454","MEDGEN:148426","UMLS:C0751955","EFO:0004277"],"termid":"MONDO:0005394","xrefs":{"Monarch":{"xref_id":"0005394"}}}


id: PBO:0067267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 341, pseudogene","termid":"PBO:0067267"}


id: GO:0110015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of elastin catabolism, the chemical reactions and pathways resulting in the breakdown of elastin.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of elastin catabolic process","termid":"GO:0060310"},{"relation_name":"is_a","term_name":"positive regulation of glycoprotein metabolic process","termid":"GO:1903020"},{"relation_name":"positively_regulates","term_name":"elastin catabolic process","termid":"GO:0060309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of elastin catabolic process","termid":"GO:0110015"}


id: PBO:0060198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 20, cell surface associated","termid":"PBO:0060198"}


id: GO:0033464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"GGG codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033464"}


id: GO:0033074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of the monoterpenoid pinene; alpha-pinene is (1S,5S)-2,6,6-trimethylbicyclo[3.1.1]hept-2-ene, and beta-pinene is (1S,5S)-6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane.","definition_xrefs":["PMID:11452597","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinene metabolic process","termid":"GO:0033073"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"pinene catabolic process","synonyms":[{"name":"pinene breakdown","type":"exact"},{"name":"pinene catabolism","type":"exact"},{"name":"pinene degradation","type":"exact"}],"termid":"GO:0033074"}


id: PBO:0109172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKMYT1 associated lncRNA","termid":"PBO:0109172"}


id: MONDO:1040023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of rare genetic conditions caused by variants in the NDUFB11 gene. Presentation is heterogenous including neurologic, cardiac, ocular, and dermatological abnormalities.","definition_xrefs":["PMID:27102574","PMID:25921236","PMID:25772934","PMID:26741492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFB11-related disorders","termid":"MONDO:1040023","xrefs":{"Monarch":{"xref_id":"1040023"}}}


id: MONDO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis caused by outdoor allergens.","definition_xrefs":["NCIT:C92188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis","termid":"MONDO:0011786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"seasonal allergic rhinitis","secondary_identifiers":["EFO:0003956","SCTID:367498001","MEDGEN:42335","MESH:D006255","UMLS:C0018621"],"synonyms":[{"name":"hay fever","type":"exact"},{"name":"seasonal allergic rhinitis","type":"exact"}],"termid":"MONDO:0005324","xrefs":{"Monarch":{"xref_id":"0005324"}}}


id: GO:0150035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trans-synaptic signaling by BDNF, modulating synaptic transmission.","definition_xrefs":["GOC:aruk","PMID:19448629","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0099183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of trans-synaptic signaling by BDNF, modulating synaptic transmission","termid":"GO:0150035"}


id: PBO:0046375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTR1 pseudogene 1","termid":"PBO:0046375"}


id: GO:0006772
data:
  {"annotated_genes":["SJAG_02406","SJAG_01742","SJAG_00381","SJAG_01970","SJAG_00827","SJAG_02047","SJAG_04067","SJAG_02420","SJAG_02421","SJAG_03362","SJAG_04282","SJAG_04866","SJAG_03538"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58794,65954],"is_not":false,"summary":null,"term":"GO:0006772"},{"annotations":[113427,88797],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[61509,73804,69799,78223,76842,73700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[110197,110198,99288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"thiamine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Thiamine"],"synonyms":[{"name":"thiamin metabolic process","type":"exact"},{"name":"thiamin metabolism","type":"exact"},{"name":"thiamine metabolism","type":"exact"},{"name":"vitamin B1 metabolic process","type":"exact"},{"name":"vitamin B1 metabolism","type":"exact"}],"termid":"GO:0006772","terms_by_termid":{"GO:0006772":null,"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: MONDO:0800339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic syndrome","termid":"MONDO:0016120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngospasm, severe neonatal episodic","secondary_identifiers":["UMLS:C3149517","MEDGEN:460867"],"synonyms":[{"name":"SNEL","type":"exact"}],"termid":"MONDO:0800339","xrefs":{"Monarch":{"xref_id":"0800339"}}}


id: GO:0036001
data:
  {"annotated_genes":["SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92584],"is_not":false,"summary":null,"term":"GO:0036001"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxal 5'-phosphate, the active form of vitamin B6, from simpler components.","definition_xrefs":["GOC:bf","GOC:yaf","MetaCyc:PYRIDOXSYN-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal phosphate biosynthetic process","termid":"GO:0042823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00691":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"'de novo' pyridoxal 5'-phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"'de novo' PLP biosynthesis","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate anabolism","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate biosynthesis","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate formation","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate synthesis","type":"exact"},{"name":"'de novo' pyridoxal phosphate biosynthetic process","type":"broad"}],"termid":"GO:0036001","terms_by_termid":{"GO:0036001":null}}


id: PBO:0090612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial isoleucine-tRNA ligase","termid":"PBO:0090612"}


id: MONDO:0018578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypophosphatemic rickets (obsolete MONDO:0018578)","termid":"MONDO:0018578","xrefs":{"Monarch":{"xref_id":"0018578"}}}


id: PATO:0000637
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000637 structure value (obsolete PATO:0000637)","termid":"PATO:0000637"}


id: PATO:0000732
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000732 body tone value (obsolete PATO:0000732)","termid":"PATO:0000732"}


id: PBO:0042505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 24","termid":"PBO:0042505"}


id: GO:0052684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole + L-serine = L-tryptophan + H2O.","definition_xrefs":["MetaCyc:RXN0-2382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity","secondary_identifiers":["EC:4.2.1.122","KEGG_REACTION:R00674","RHEA:26434"],"synonyms":[{"name":"L-serine hydro-lyase (adding indole; L-tryptophan-forming) activity","type":"exact"},{"name":"tryptophan synthase beta subunit activity","type":"narrow"}],"termid":"GO:0052684"}


id: PBO:0077960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-1","termid":"PBO:0077960"}


id: PBO:0026945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_level_oscillation_during_mitotic_cell_cycle","termid":"PBO:0026945"}


id: PBO:0069551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 822, pseudogene","termid":"PBO:0069551"}


id: GO:1904763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a chaperone-mediated autophagy translocation complex.","definition_xrefs":["PMID:18644871","GO_REF:0000079","GOC:pad","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030163","GO:0044085","GO:0065003","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex assembly","synonyms":[{"name":"CMA receptor complex assembly","type":"related"},{"name":"CMA receptor complex formation","type":"related"},{"name":"CMA translocation complex assembly","type":"exact"},{"name":"CMA translocation complex formation","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex assembly","type":"related"},{"name":"chaperone-mediated autophagy receptor complex formation","type":"related"},{"name":"chaperone-mediated autophagy translocation complex formation","type":"exact"}],"termid":"GO:1904763"}


id: GO:0035338
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107227],"is_not":false,"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a long-chain fatty-acyl-CoA any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty-acyl-CoA metabolic process","termid":"GO:0035336"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0055086","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"long-chain fatty-acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-75876"],"synonyms":[{"name":"long-chain fatty acyl CoA biosynthetic process","type":"exact"},{"name":"long-chain fatty-acyl-CoA anabolism","type":"exact"},{"name":"long-chain fatty-acyl-CoA biosynthesis","type":"exact"},{"name":"long-chain fatty-acyl-CoA formation","type":"exact"},{"name":"long-chain fatty-acyl-CoA synthesis","type":"exact"}],"termid":"GO:0035338","terms_by_termid":{"GO:0035338":null}}


id: PBO:0052828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 128, pseudogene","termid":"PBO:0052828"}


id: GO:0045087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:add","GOC:mtg_sensu","GOC:ebc","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immune response","secondary_identifiers":["Reactome:R-HSA-168249","Wikipedia:Innate_immune_system","GO:0002226"],"synonyms":[{"name":"innate immunity","type":"exact"},{"name":"nonspecific immune response","type":"exact"}],"termid":"GO:0045087"}


id: GO:0017142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin susceptibility/resistance (obsolete GO:0017142)","synonyms":[{"name":"toxin susceptibility/resistance","type":"exact"}],"termid":"GO:0017142"}


id: GO:1904507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomere maintenance in response to DNA damage.","definition_xrefs":["GOC:BHF_telomere","PMID:22579284","GOC:TermGenie","GOC:nc","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance in response to DNA damage","termid":"GO:1904505"},{"relation_name":"positively_regulates","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomere maintenance in response to DNA damage","synonyms":[{"name":"activation of DNA damage response, telomere maintenance","type":"narrow"},{"name":"activation of telomere maintenance in response to DNA damage","type":"narrow"},{"name":"positive regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"up-regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up-regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"upregulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"upregulation of telomere maintenance in response to DNA damage","type":"exact"}],"termid":"GO:1904507"}


id: PBO:0005220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Sds21","termid":"PBO:0005220"}


id: PBO:0005266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation factor Ump1 (predicted)","termid":"PBO:0005266"}


id: PATO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A displaced angular placement quality inhering in a body part by virtue of the bearer's movement closer the medial plane of the body.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced to","termid":"PATO:0002168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adduction","termid":"PATO:0002133"}


id: PBO:0075119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 168","termid":"PBO:0075119"}


id: MONDO:0009883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital alpha2 antiplasmin deficiency is a rare hemorrhagic disorder caused by congenital deficiency of alpha2 antiplasmin, leading to dysregulated fibrinolysis and is characterized by a hemorrhagic tendency presenting from childhood with prolonged bleeding and ecchymoses following minor trauma and spontaneous bleeding episodes (often in unusual locations like diaphysis of long bones). Congenital alpha2 antiplasmin deficiency is inherited in an autosomal recessive manner.","definition_xrefs":["Orphanet:79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"alpha-2-plasmin inhibitor deficiency","secondary_identifiers":["DOID:0060601","OMIM:262850","UMLS:C2752081","icd11.foundation:688627594","GARD:731","NANDO:2200687","SCTID:716746003","MESH:C537777","MEDGEN:414178"],"synonyms":[{"name":"alpha-2-plasmin inhibitor deficiency","type":"exact"},{"name":"anti-plasmin deficiency, congenital","type":"related"},{"name":"antiplasmin deficiency","type":"related"},{"name":"antiplasmin deficiency, congenital","type":"related"},{"name":"antiplasmin defiency","type":"exact"},{"name":"congenital alpha2-antiplasmin deficiency","type":"related"},{"name":"plasmin inhibitor deficiency","type":"exact"}],"termid":"MONDO:0009883","xrefs":{"Monarch":{"xref_id":"0009883"}}}


id: FYPO:0003586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which replication fork processing is abnormal. Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["GO:0031297","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"abnormal replication fork processing","synonyms":[{"name":"abnormal HR-mediated fork restart","type":"related"},{"name":"abnormal collapsed replication fork processing","type":"exact"},{"name":"abnormal recovery from replication fork arrest","type":"exact"},{"name":"abnormal recovery from replication fork stalling","type":"exact"},{"name":"abnormal replication fork processing during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork processing during vegetative growth","type":"exact"},{"name":"abnormal replication fork restart","type":"related"},{"name":"abnormal replication restart","type":"related"}],"termid":"FYPO:0003586"}


id: GO:0045703
data:
  {"annotated_genes":["SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68646],"is_not":false,"summary":null,"term":"GO:0045703"}]},"cv_name":"molecular_function","definition":"Catalysis of the reduction of a ketone group to form the corresponding alcohol.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00630":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ketoreductase activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0045703","terms_by_termid":{"GO:0045703":null}}


id: GO:0046680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a DDT stimulus. DDT, dichlorodiphenyltrichloroethane, is a chlorinated hydrocarbon pesticide moderately toxic to humans and other animals.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DDT","synonyms":[{"name":"DDT resistance","type":"related"},{"name":"DDT susceptibility/resistance","type":"related"}],"termid":"GO:0046680"}


id: GO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process dependent upon B cell antigen receptor signaling in response to self or foreign antigen through which B cells are selected for survival.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell selection","synonyms":[{"name":"B lymphocyte selection","type":"exact"},{"name":"B-cell selection","type":"exact"},{"name":"B-lymphocyte selection","type":"exact"}],"termid":"GO:0002339"}


id: GO:0050569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycolaldehyde + H2O + NAD+ = glycolate + 2 H+ + NADH.","definition_xrefs":["RHEA:20001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycolaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R01333","MetaCyc:GLYCOLALD-DEHYDROG-RXN","EC:1.2.1.21"],"synonyms":[{"name":"glycol aldehyde dehydrogenase activity","type":"related"},{"name":"glycolaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050569"}


id: GO:0042184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylene catabolic process","synonyms":[{"name":"xylene breakdown","type":"exact"},{"name":"xylene catabolism","type":"exact"},{"name":"xylene degradation","type":"exact"}],"termid":"GO:0042184"}


id: GO:1902509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of methionine-importing activity.","definition_xrefs":["GOC:TermGenie","PMID:23748165","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methionine-importing complex","synonyms":[{"name":"methionine importer complex","type":"exact"},{"name":"methionine importing complex","type":"exact"}],"termid":"GO:1902509"}


id: GO:0032762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mast cell cytokine production","termid":"GO:0032762"}


id: FYPO:0005787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing extends for a normal (i.e. indistinguishable from wild type) distance from the break site. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["PomBase:mah","GO:0000729","PMID:27729451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spatial extent of double-strand break processing","synonyms":[{"name":"normal spatial extent of DSB processing","type":"exact"},{"name":"normal spatial extent of double-strand break processing during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of double-strand break processing during vegetative growth","type":"exact"},{"name":"normal spatial extent of double-strand break resection","type":"exact"}],"termid":"FYPO:0005787"}


id: GO:0015933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An oxidoreductase which contains either flavin-adenine dinucleotide or flavin mononucleotide as a prosthetic group, utilizes either NADH or NADPH and transfers electrons to other electron transfer proteins.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete flavin-containing electron transporter (obsolete GO:0015933)","synonyms":[{"name":"flavin-containing electron transporter","type":"exact"}],"termid":"GO:0015933"}


id: MONDO:0012986
data:
  {"annotated_genes":["SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85254],"is_not":false,"summary":null,"term":"MONDO:0012986"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral parasagittal parieto-occipital polymicrogyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567201","MEDGEN:862085","OMIM:612691","DOID:0080923","GARD:10785","Orphanet:208441","icd11.foundation:293410499","UMLS:C4013648"],"synonyms":[{"name":"BTOP","type":"related"},{"name":"polymicrogyria, bilateral temporooccipital","type":"related"}],"termid":"MONDO:0012986","terms_by_termid":{"MONDO:0012986":null},"xrefs":{"Monarch":{"xref_id":"0012986"}}}


id: PBO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetate transmembrane transporter (predicted)","termid":"PBO:0001009"}


id: PBO:0061285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 6","termid":"PBO:0061285"}


id: PBO:0030719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_alpha-glucan_level","termid":"PBO:0030719"}


id: PBO:0001017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, Raptor homolog Mip1","termid":"PBO:0001017"}


id: GO:0010018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated upon sensing of far red light by a photoreceptor molecule. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mtg_far_red","GOC:sm","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"},{"relation_name":"is_a","term_name":"cellular response to far red light","termid":"GO:0071490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"far-red light signaling pathway","synonyms":[{"name":"far red light signalling pathway","type":"exact"},{"name":"far red signaling pathway","type":"exact"},{"name":"far-red light signal transduction","type":"exact"}],"termid":"GO:0010018"}


id: FYPO:0007218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 18 of histone H3 in regions containing protein-coding genes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:31260531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3 acetylation during vegetative growth","termid":"FYPO:0002362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K18 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone H3-K18 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K18 acetylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K18 acetylation at protein coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K18 acetylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007218"}


id: MONDO:0014851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypercalcemia, infantile in which the cause of the disease is a mutation in the SLC34A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypercalcemia, infantile","termid":"MONDO:0000212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"hypercalcemia, infantile, 2","secondary_identifiers":["GARD:18435","OMIM:616963","UMLS:C4310473","MEDGEN:934441"],"synonyms":[{"name":"HCINF2","type":"exact"},{"name":"SLC34A1 autosomal recessive infantile hypercalcemia","type":"exact"},{"name":"autosomal recessive infantile hypercalcemia caused by mutation in SLC34A1","type":"exact"},{"name":"hypercalcemia, infantile 2","type":"exact"},{"name":"hypercalcemia, infantile, 2","type":"exact"},{"name":"hypercalcemia, infantile, type 2","type":"exact"}],"termid":"MONDO:0014851","xrefs":{"Monarch":{"xref_id":"0014851"}}}


id: PBO:0079818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin interaction motif containing 1","termid":"PBO:0079818"}


id: GO:0019159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-nicotinamide D-ribonucleotide + H2O = beta-nicotinate D-ribonucleotide + NH3.","definition_xrefs":["EC:3.5.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"nicotinamide-nucleotide amidase activity","secondary_identifiers":["RHEA:12400","MetaCyc:NMNAMIDOHYDRO-RXN"],"synonyms":[{"name":"NMN amidohydrolase","type":"narrow"},{"name":"NMN deamidase activity","type":"related"},{"name":"nicotinamide mononucleotide amidohydrolase activity","type":"related"},{"name":"nicotinamide mononucleotide deamidase activity","type":"related"},{"name":"nicotinamide-D-ribonucleotide amidohydrolase activity","type":"related"}],"termid":"GO:0019159"}


id: PBO:0079214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase 6","termid":"PBO:0079214"}


id: MONDO:0007047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrokeratoelastoidosis of Costa is a rare dermatosis characterized by small, firm papules or plaques (resembling warts) on the sides of the hands and feet. These stationary and asymptomatic lesions appear generally at puberty, or sometimes later","definition_xrefs":["Orphanet:38"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acquired dermis elastic tissue disorder with increased elastic tissue (obsolete MONDO:0016436)","termid":"MONDO:0016436"},{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma","termid":"MONDO:0017675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"punctate palmoplantar keratoderma type III","secondary_identifiers":["MEDGEN:107467","UMLS:C0545044","DOID:0060362","EFO:1000758","GARD:125","OMIM:101850","MESH:C535653"],"synonyms":[{"name":"AKE","type":"exact"},{"name":"NTIA","type":"related"},{"name":"PPKP3","type":"exact"},{"name":"TIA","type":"related"},{"name":"acrokeratoelastoidosis","type":"related"},{"name":"acrokeratoelastoidosis of Costa","type":"exact"},{"name":"aganglionosis, total colonic","type":"related"},{"name":"ake","type":"exact"},{"name":"collagenous plaques of hand and feet","type":"related"},{"name":"collagenous plaques of hands and feet","type":"related"},{"name":"keratoderma, palmoplantar, punctate type 3","type":"exact"},{"name":"near-total intestinal aganglionosis","type":"related"},{"name":"palmoplantar keratoderma, punctate type 3","type":"related"},{"name":"palmoplantar keratoderma, punctate type III","type":"related"},{"name":"punctate palmoplantar hyperkeratosis type 3","type":"exact"},{"name":"punctate palmoplantar keratoderma type 3","type":"exact"},{"name":"rare form of Hirschsprung's disease","type":"related"}],"termid":"MONDO:0007047","xrefs":{"Monarch":{"xref_id":"0007047"}}}


id: SO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron","synonyms":[{"name":"inside intron","type":"exact"}],"termid":"SO:0000069"}


id: PBO:0076570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3K","termid":"PBO:0076570"}


id: PBO:0075568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle and centriole associated protein 1","termid":"PBO:0075568"}


id: PBO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 19A","termid":"PBO:0044739"}


id: MONDO:0012462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive frontotemporal pachygyria","secondary_identifiers":["MESH:C538092","GARD:21489","MEDGEN:343995","Orphanet:329329","UMLS:C1853215","OMIM:610279"],"synonyms":[{"name":"pachygyria, frontotemporal","type":"related"}],"termid":"MONDO:0012462","xrefs":{"Monarch":{"xref_id":"0012462"}}}


id: GO:0033098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the amyloplast envelope; also faces the amyloplast stroma.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid inner membrane","termid":"GO:0009528"},{"relation_name":"is_a","term_name":"amyloplast membrane","termid":"GO:0033097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"amyloplast inner membrane","termid":"GO:0033098"}


id: MONDO:0002807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumors or cancer of the bronchi.","definition_xrefs":["MESH:D001984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchial neoplasm","secondary_identifiers":["DOID:3906","MEDGEN:2735","SCTID:126705004","UMLS:C0006264","EFO:1000849","HP:0030077","NANDO:2200081"],"synonyms":[{"name":"bronchial neoplasm","type":"exact"},{"name":"bronchial neoplasm (disease)","type":"exact"},{"name":"bronchus neoplasm","type":"exact"},{"name":"bronchus neoplasm (disease)","type":"exact"},{"name":"bronchus tumor","type":"exact"},{"name":"bronchus tumour","type":"exact"},{"name":"neoplasm of bronchus","type":"exact"},{"name":"tumor of bronchus","type":"exact"},{"name":"tumour of bronchus","type":"exact"}],"termid":"MONDO:0002807","xrefs":{"Monarch":{"xref_id":"0002807"}}}


id: PBO:0091064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase Mag2","termid":"PBO:0091064"}


id: MONDO:0014792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone Paget disease","termid":"MONDO:0005382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paget disease of bone 6","secondary_identifiers":["DOID:0081369","OMIM:616833","UMLS:C4085250","MEDGEN:908743"],"synonyms":[{"name":"PDB6","type":"exact"},{"name":"Paget disease of bone 6","type":"exact"},{"name":"Paget disease of bone 6; PDB6","type":"exact"},{"name":"Paget disease of bone type 6","type":"exact"}],"termid":"MONDO:0014792","xrefs":{"Monarch":{"xref_id":"0014792"}}}


id: GO:2001177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mediator complex assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of mediator complex assembly","termid":"GO:2001176"},{"relation_name":"negatively_regulates","term_name":"mediator complex assembly","termid":"GO:0036034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mediator complex assembly","termid":"GO:2001177"}


id: PBO:0070333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 5","termid":"PBO:0070333"}


id: PBO:0059352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S16","termid":"PBO:0059352"}


id: GO:0140288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SWI/SNF subcomplex that incorporates two mutually exclusive paralogs, GLTSCR1 (glioma tumor suppressor candidate region gene 1) or GLTSCR1L (GLTSCR1-like), BRD9 (bromodomain-containing 9) and the BAF subunits BAF155, BAF60, SS18, BAF53a, and BRG1/BRM.","definition_xrefs":["PMID:29374058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"GBAF complex","termid":"GO:0140288"}


id: PBO:0072242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 17","termid":"PBO:0072242"}


id: PBO:0057562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 744","termid":"PBO:0057562"}


id: PBO:0060323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO1B antisense RNA 1","termid":"PBO:0060323"}


id: GO:0009138
data:
  {"annotated_genes":["SJAG_00779","SJAG_04665","SJAG_00885","SJAG_02874","SJAG_04657","SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[92200,107012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[107013,92201,95244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[80199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[76058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine nucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_02874":null,"SJAG_03676":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009138","terms_by_termid":{"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0006256":null,"GO:0046704":null,"GO:0046705":null}}


id: GO:0072296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the loop of Henle of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of loop of Henle identity","termid":"GO:0072086"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric loop of Henle development","termid":"GO:0072236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric loop of Henle identity","synonyms":[{"name":"specification of metanephric intermediate tubule identity","type":"exact"}],"termid":"GO:0072296"}


id: MONDO:0800143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cytomegalovirus pneumonia due to variant in the NOS2 gene.","definition_xrefs":["PMID:31995689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytomegalovirus pneumonia","termid":"MONDO:0024354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytomegalovirus pneumonia due to NOS2 deficiency","termid":"MONDO:0800143","xrefs":{"Monarch":{"xref_id":"0800143"}}}


id: MONDO:0850199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary immunodeficiency disease that results from defeciency in the number or function of CD56+CD3− NK cell in peripheral blood.","definition_xrefs":["DOID:0080709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"NK cell deficiency","secondary_identifiers":["MEDGEN:1644714","UMLS:C4693357"],"termid":"MONDO:0850199","xrefs":{"Monarch":{"xref_id":"0850199"}}}


id: PBO:0056693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis/spermiogenesis associated 1","termid":"PBO:0056693"}


id: PBO:0033789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_kinetochore_microtubule_depolymerization_during_mitotic_metaphase_chromosome_recapture","termid":"PBO:0033789"}


id: MONDO:0006407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse malignant mesothelioma arising from the pleura and less often the peritoneum. It is characterized by the presence of spindle cells. Anaplastic morphologic features and multinucleated malignant cells may also be seen.","definition_xrefs":["NCIT:C45655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcomatoid mesothelioma","secondary_identifiers":["EFO:1000521","MEDGEN:137774","UMLS:C0334513","DOID:4488"],"synonyms":[{"name":"malignant fibrous mesothelioma","type":"exact"},{"name":"malignant fibrous mesothelioma (morphologic abnormality)","type":"exact"},{"name":"sarcomatoid mesothelioma","type":"exact"},{"name":"sarcomatoid mesothelioma (morphologic abnormality)","type":"exact"},{"name":"spindled mesothelioma","type":"exact"}],"termid":"MONDO:0006407","xrefs":{"Monarch":{"xref_id":"0006407"}}}


id: GO:1902076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral motor column neuron migration.","definition_xrefs":["PMID:20711475","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of motor neuron migration","termid":"GO:1905483"},{"relation_name":"regulates","term_name":"lateral motor column neuron migration","termid":"GO:0097477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral motor column neuron migration","termid":"GO:1902076"}


id: GO:0014871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which actin and myosin interact, split ATP and generate force during skeletal muscle contraction. This process is one of the components of the regulation of the force of skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding involved in regulation of the velocity of shortening in skeletal muscle contraction","termid":"GO:0014880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cross bridge formation involved in regulation of the velocity of shortening in skeletal muscle contraction","termid":"GO:0014871"}


id: PBO:0064192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 activating protein","termid":"PBO:0064192"}


id: PBO:0047456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc mu receptor","termid":"PBO:0047456"}


id: GO:0080192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from the activity of a primary thickening meristem.","definition_xrefs":["PO:0025004","ISBN:0471245208","JSTOR:4354165","PO:0005039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral growth","termid":"GO:0080190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary thickening","termid":"GO:0080192"}


id: MONDO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial DNA depletion syndrome (obsolete MONDO:0000067)","termid":"MONDO:0000067","xrefs":{"Monarch":{"xref_id":"0000067"}}}


id: MONDO:0015389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Supernumerary nostril is an extremely rare congenital malformation characterized by the presence of one or more accessory nostrils, with or without accessory cartilage, located medially, above, below or laterally to the other nostrils. Unlike in polyrhinia there is no duplication of the nasal septum/cavity. Supernumerary nostril is often associated with other congenital malformations usually of face.","definition_xrefs":["Orphanet:141096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supernumerary nostril","secondary_identifiers":["HP:0009934","MEDGEN:867014","SCTID:719163006","GARD:19946","icd11.foundation:306735786","UMLS:C4021372"],"synonyms":[{"name":"accessory nostril","type":"exact"},{"name":"supernumerary naris","type":"exact"}],"termid":"MONDO:0015389","xrefs":{"Monarch":{"xref_id":"0015389"}}}


id: PATO:0000584
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An increased size quality inhering in a bearer by virtue of the bearer's exhibiting enlargement of a cell or constituent group of cells (for example, organ).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased volume","termid":"PATO:0000595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic","synonyms":[{"name":"hypertrophy","type":"narrow"}],"termid":"PATO:0000584"}


id: PR:Q9UUA9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-rRNA-processing protein TSR2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21250:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein tsr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.15","secondary_identifiers":["UniProtKB:Q9UUA9"],"synonyms":[{"name":"SPBC409.15","type":"related"},{"name":"Spom972h-TSR2","type":"exact"}],"termid":"PR:Q9UUA9"}


id: PR:O13706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hpz2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP-type zinc finger-containing protein C13F5.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.07c","synonyms":[{"name":"Spom972h-hpz2","type":"exact"}],"termid":"PR:O13706"}


id: GO:1990506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA replication process that uses parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands during the mitotic cell cycle.","definition_xrefs":["PMID:16120966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA-templated DNA replication","synonyms":[{"name":"mitotic DNA-dependent DNA replication","type":"exact"}],"termid":"GO:1990506"}


id: PR:Q10273
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G7.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.09c","synonyms":[{"name":"Spom972h-SPAC13G7.09c","type":"exact"}],"termid":"PR:Q10273"}


id: GO:0036240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the plasma membrane and the cell wall, as found in organisms such as filamentous fungi.","definition_xrefs":["GOC:di","PMID:21564341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periplasmic space","termid":"GO:0042597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septal periplasm","synonyms":[{"name":"cell wall-enclosed septal periplasm","type":"exact"}],"termid":"GO:0036240"}


id: PBO:0050581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 5","termid":"PBO:0050581"}


id: PBO:0070765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11 pseudogene 1","termid":"PBO:0070765"}


id: GO:0034506
data:
  {"annotated_genes":["SJAG_03220","SJAG_00768","SJAG_00646","SJAG_03567","SJAG_02778","SJAG_01332","SJAG_01745","SJAG_03449","SJAG_04038","SJAG_00170","SJAG_03832","SJAG_03491","SJAG_00684","SJAG_03126","SJAG_01082","SJAG_01050","SJAG_00307","SJAG_03183","SJAG_00207"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70356,87756,88828,89440,105946,110057,111424,113122,114232,116208],"is_not":false,"summary":null,"term":"GO:0034506"},{"annotations":[91828,116259,89823,109408,111693,106056,116889,91092],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061638"},{"annotations":[101814],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043505"}]},"cv_name":"cellular_component","definition":"The innermost portion of the centromeric region of a chromosome, encompassing the core region of a chromosome centromere and the proteins that bind to it.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"chromosome, centromeric region","termid":"GO:0000775"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00207":null,"SJAG_00307":null,"SJAG_00646":null,"SJAG_00684":null,"SJAG_00768":null,"SJAG_01050":null,"SJAG_01082":null,"SJAG_01332":null,"SJAG_01745":null,"SJAG_02778":null,"SJAG_03126":null,"SJAG_03183":null,"SJAG_03220":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03567":null,"SJAG_03832":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"chromosome, centromeric core domain","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromosome, centric core region","type":"related"},{"name":"chromosome, centromeric core region","type":"exact"}],"termid":"GO:0034506","terms_by_termid":{"GO:0034506":null,"GO:0043505":null,"GO:0061638":null}}


id: PBO:0027191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_protein_degradation","termid":"PBO:0027191"}


id: PBO:0091242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic acid transmembrane transporter","termid":"PBO:0091242"}


id: PBO:0083827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of U3-containing 90S preribosome; involved in production of 18S rRNA and assembly of small ribosomal subunit; also part of pre-40S ribosome and required for its export into cytoplasm; binds RNA and contains pumilio domain","termid":"PBO:0083827"}


id: GO:2000363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prostaglandin-E synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin-E synthase activity","synonyms":[{"name":"positive regulation of (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"exact"},{"name":"positive regulation of PGE isomerase activity","type":"exact"},{"name":"positive regulation of PGE2 isomerase activity","type":"exact"},{"name":"positive regulation of PGH-PGE isomerase activity","type":"exact"},{"name":"positive regulation of Prostaglandin-H(2) E-isomerase activity","type":"exact"},{"name":"positive regulation of endoperoxide isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin H-E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin R-prostaglandin E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin endoperoxide E isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin endoperoxide E2 isomerase activity","type":"exact"},{"name":"positive regulation of prostaglandin-H2 E-isomerase activity","type":"exact"}],"termid":"GO:2000363"}


id: GO:1901315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2A K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2A K63-linked ubiquitination (obsolete GO:1901315)","synonyms":[{"name":"down regulation of histone H2A K63-linked ubiquitination","type":"exact"},{"name":"down-regulation of histone H2A K63-linked ubiquitination","type":"exact"},{"name":"downregulation of histone H2A K63-linked ubiquitination","type":"exact"},{"name":"inhibition of histone H2A K63-linked ubiquitination","type":"narrow"}],"termid":"GO:1901315"}


id: PBO:0040593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BACH1 intronic transcript 3","termid":"PBO:0040593"}


id: PR:Q9UU88
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylate kinase isoenzyme 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12595:SF0","PRO:DNx","OMA:SCHPO04983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase isoenzyme 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.11c","secondary_identifiers":["UniProtKB:Q9UU88"],"synonyms":[{"name":"AK/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AK6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AK6","type":"exact"},{"name":"dual activity adenylate kinase/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU88"}


id: PBO:0076936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking from ER to golgi regulator","termid":"PBO:0076936"}


id: PBO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 4 (pseudogene)","termid":"PBO:0060156"}


id: GO:0160020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferroptosis.","definition_xrefs":["PMID:32015325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of ferroptosis","termid":"GO:0110075"},{"relation_name":"positively_regulates","term_name":"ferroptosis","termid":"GO:0097707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferroptosis","termid":"GO:0160020"}


id: PBO:0079579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C","termid":"PBO:0079579"}


id: MONDO:0010137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial thyroid dyshormonogenesis in which the cause of the disease is a mutation in the DUOXA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thyroid dyshormonogenesis","termid":"MONDO:0010132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid dyshormonogenesis 5","secondary_identifiers":["MESH:C562771","MEDGEN:87430","DOID:0112184","UMLS:C0342196","SCTID:63127008","GARD:18192","OMIM:274900"],"synonyms":[{"name":"DUOXA2 familial thyroid dyshormonogenesis","type":"exact"},{"name":"TDH5","type":"exact"},{"name":"familial thyroid dyshormonogenesis caused by mutation in DUOXA2","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 5","type":"exact"},{"name":"thyroid dyshormonogenesis 5","type":"exact"},{"name":"thyroid dyshormonogenesis type 5","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 5","type":"exact"}],"termid":"MONDO:0010137","xrefs":{"Monarch":{"xref_id":"0010137"}}}


id: FYPO:0002026
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119356],"is_not":false,"summary":null,"term":"FYPO:0002026"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an actomyosin contractile ring that is perpendicular to the long axis of the cell, but is not located at the midpoint of the long axis.","definition_xrefs":["PomBase:mah","PMID:8834798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actomyosin contractile ring","termid":"FYPO:0001369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":1,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"actomyosin contractile ring displaced from midpoint","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta"],"synonyms":[{"name":"actomyosin contractile ring displaced from cell center","type":"exact"},{"name":"actomyosin contractile ring displaced from cell centre","type":"exact"},{"name":"actomyosin contractile ring displaced from cell midpoint","type":"exact"},{"name":"actomyosin contractile ring displaced from midpoint during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring displaced from midpoint during vegetative growth","type":"exact"},{"name":"cytokinetic contractile ring displaced from midpoint","type":"exact"}],"termid":"FYPO:0002026","terms_by_termid":{"FYECO:0000162":null,"FYPO:0002026":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0009651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudo-Hurler polydystrophy (obsolete MONDO:0009651)","termid":"MONDO:0009651","xrefs":{"Monarch":{"xref_id":"0009651"}}}


id: MONDO:0019037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare late-onset neurodegenerative disease characterized by supranuclear gaze palsy, postural instability, progressive rigidity, and mild dementia.","definition_xrefs":["Orphanet:683"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"excluded_subClassOf","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"supranuclear oculomotor palsy","termid":"MONDO:0020257"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"progressive supranuclear palsy","secondary_identifiers":["MESH:D013494","NANDO:1200009","DOID:678","ICD9:333.0","NORD:1619","NCIT:C85028","GARD:7471","OMIMPS:601104","SCTID:192976002","SCTID:28978003","icd11.foundation:1493396558","MedDRA:10036813","UMLS:C0038868","MEDGEN:21026"],"synonyms":[{"name":"PSP syndrome","type":"exact"},{"name":"Steele-Richardson-Olszewski disease","type":"exact"},{"name":"Steele-Richardson-Olszewski syndrome","type":"exact"},{"name":"familial progressive supranuclear palsy (type)","type":"related"},{"name":"progressive supranuclear ophthalmoplegia","type":"exact"},{"name":"supranuclear palsy, progressive","type":"related"}],"termid":"MONDO:0019037","xrefs":{"Monarch":{"xref_id":"0019037"}}}


id: GO:0010519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of phospholipase activity, the hydrolysis of a phospholipid.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipase activity","termid":"GO:0010517"},{"relation_name":"is_a","term_name":"negative regulation of lipase activity","termid":"GO:0060192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipase activity","termid":"GO:0010519"}


id: PR:W6JQK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC651.07 gene.","definition_xrefs":["UniProtKB:W6JQK2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPBC651.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.07","synonyms":[{"name":"Spom972h-SPBC651.07","type":"exact"}],"termid":"PR:W6JQK2"}


id: PBO:0064338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid transfer protein","termid":"PBO:0064338"}


id: PBO:0060378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin regulatory factor","termid":"PBO:0060378"}


id: PR:Q9UT96
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC323.03c gene.","definition_xrefs":["UniProtKB:Q9UT96","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C323.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.03c","synonyms":[{"name":"Spom972h-SPAC323.03c","type":"exact"}],"termid":"PR:Q9UT96"}


id: PBO:0043587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 1","termid":"PBO:0043587"}


id: FYPO:0005754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->3)-alpha-D-glucan measured in the periplasmic space is greater than normal.","definition_xrefs":["PMID:11514435","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased (1->3)-alpha-D-glucan level in periplasmic space","synonyms":[{"name":"increased (1,3)alpha-D-glucan level in periplasmic space","type":"exact"},{"name":"increased (1->3)-alpha-D-glucan accumulation in periplasmic space","type":"related"},{"name":"increased (1->3)-alpha-D-glucan level in periplasmic space during mitotic cell cycle","type":"related"},{"name":"increased (1->3)-alpha-D-glucan level in periplasmic space during vegetative growth","type":"exact"},{"name":"increased 1,3-alpha-D-glucan level in periplasmic space","type":"exact"},{"name":"increased level of (1->3)-alpha-D-glucan in periplasmic space","type":"exact"}],"termid":"FYPO:0005754"}


id: GO:0035268
data:
  {"annotated_genes":["SJAG_04053","SJAG_04316","SJAG_01264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105725,101296,92801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The addition of a mannose residue to a protein acceptor molecule.","definition_xrefs":["GOC:bf","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"},{"relation_name":"is_a","term_name":"mannosylation","termid":"GO:0097502"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01264":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein mannosylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein amino acid mannosylation","type":"exact"}],"termid":"GO:0035268","terms_by_termid":{"GO:0035269":null}}


id: PBO:0011055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_indirect_input","termid":"PBO:0011055"}


id: PATO:0002455
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A  quality inhering in a bearer by virtue of the bearer's architecture bearing resemblence to a corymb type of inflorescence.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corymb-like","termid":"PATO:0002455"}


id: PBO:0071576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 5","termid":"PBO:0071576"}


id: PATO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000392 limited (obsolete PATO:0000392)","termid":"PATO:0000392"}


id: GO:0086101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endothelin receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","PMID:17376402","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelin receptor signaling pathway","termid":"GO:0086100"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endothelin receptor signaling pathway involved in heart process","synonyms":[{"name":"endothelin receptor signalling pathway involved in heart process","type":"exact"}],"termid":"GO:0086101"}


id: GO:0035376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a sterol into a cell or organelle. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:bf","PMID:19793923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sterol import","synonyms":[{"name":"sterol influx","type":"exact"},{"name":"sterol uptake","type":"exact"}],"termid":"GO:0035376"}


id: MONDO:1012934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hearing loss that occurs in dogs due to a mutation in the EPS8L2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder, non-human animal","termid":"MONDO:1012969"},{"relation_name":"is_a","term_name":"inherited auditory system disease, non-human animal","termid":"MONDO:1012970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, EPS8L2-related, dog","secondary_identifiers":["OMIA:002550-9615"],"termid":"MONDO:1012934","xrefs":{"Monarch":{"xref_id":"1012934"}}}


id: FYPO:0004990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells in the G2 phase of the mitotic cell cycle undergo meiotic nuclear divisions, and premeiotic DNA replication does not occur. In these cells, sister chromatids precociously segregate at the first meiotic nuclear division. Normally, upon nitrogen starvation cells arrest the mitotic cell in G1 phase, and then proceed into conjugation, premeiotic DNA replication and meiosis.","definition_xrefs":["PMID:15298676","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished premeiotic DNA replication","termid":"FYPO:0002044"},{"relation_name":"is_a","term_name":"abolished premeiotic DNA replication","termid":"FYPO:0002044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000293"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"G2-exit meiosis with abolished premeiotic DNA replication","synonyms":[{"name":"G2-exit meiotic nuclear division with abolished premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0004990"}


id: PBO:0069544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 815, pseudogene","termid":"PBO:0069544"}


id: MONDO:0014325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pachyonychia congenita in which the cause of the disease is a mutation in the KRT6B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pachyonychia congenita","termid":"MONDO:0016471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pachyonychia congenita 4","secondary_identifiers":["OMIM:615728","UMLS:C3714949","MEDGEN:811524","GARD:16006"],"synonyms":[{"name":"KRT6B pachyonychia congenita","type":"exact"},{"name":"PC4","type":"related"},{"name":"pachyonychia congenita 4","type":"exact"},{"name":"pachyonychia congenita caused by mutation in KRT6B","type":"exact"},{"name":"pachyonychia congenita type 4","type":"exact"}],"termid":"MONDO:0014325","xrefs":{"Monarch":{"xref_id":"0014325"}}}


id: MONDO:0001926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder affecting the ureter.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureteral disorder","secondary_identifiers":["DOID:1426","SCTID:128073008","UMLS:C0403608","MEDGEN:98018","MESH:D014515","NCIT:C27148"],"synonyms":[{"name":"disease of ureter","type":"exact"},{"name":"disease or disorder of ureter","type":"exact"},{"name":"disorder of ureter","type":"exact"},{"name":"ureter disease","type":"exact"},{"name":"ureter disease or disorder","type":"exact"},{"name":"ureter disorder","type":"exact"},{"name":"ureteric disease","type":"exact"},{"name":"ureteric disorder","type":"exact"}],"termid":"MONDO:0001926","xrefs":{"Monarch":{"xref_id":"0001926"}}}


id: MONDO:0024812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0024812 (obsolete MONDO:0024812)","termid":"MONDO:0024812","xrefs":{"Monarch":{"xref_id":"0024812"}}}


id: PBO:0065414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 3","termid":"PBO:0065414"}


id: PR:P87058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sla1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.10c","synonyms":[{"name":"La autoantigen homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"La ribonucleoprotein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sla1","type":"exact"}],"termid":"PR:P87058"}


id: PBO:0081998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 31","termid":"PBO:0081998"}


id: PBO:0033821
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of Rad Wee1","termid":"PBO:0033821"}


id: GO:0090358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of L-tryptophan metabolic process","termid":"GO:0090357"},{"relation_name":"positively_regulates","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-tryptophan metabolic process","synonyms":[{"name":"positive regulation of tryptophan metabolic process","type":"related"},{"name":"positive regulation of tryptophan metabolism","type":"exact"}],"termid":"GO:0090358"}


id: GO:0103050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isobutanol + NADP = isobutyraldehyde + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isobutyraldehyde reductase activity (obsolete GO:0103050)","termid":"GO:0103050"}


id: GO:1905537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eukaryotic translation initiation factor 4F complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:PARL","PMID:18426977","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of eukaryotic translation initiation factor 4F complex assembly","termid":"GO:1905535"},{"relation_name":"positively_regulates","term_name":"eukaryotic translation initiation factor 4F complex assembly","termid":"GO:0097010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of eukaryotic translation initiation factor 4F complex assembly","synonyms":[{"name":"activation of eIF-4F assembly","type":"narrow"},{"name":"activation of eIF4F assembly","type":"narrow"},{"name":"activation of eukaryotic translation initiation factor 4F complex assembly","type":"narrow"},{"name":"positive regulation of eIF-4F assembly","type":"exact"},{"name":"positive regulation of eIF4F assembly","type":"exact"},{"name":"up regulation of eIF-4F assembly","type":"exact"},{"name":"up regulation of eIF4F assembly","type":"exact"},{"name":"up regulation of eukaryotic translation initiation factor 4F complex assembly","type":"exact"},{"name":"up-regulation of eIF-4F assembly","type":"exact"},{"name":"up-regulation of eIF4F assembly","type":"exact"},{"name":"up-regulation of eukaryotic translation initiation factor 4F complex assembly","type":"exact"},{"name":"upregulation of eIF-4F assembly","type":"exact"},{"name":"upregulation of eIF4F assembly","type":"exact"},{"name":"upregulation of eukaryotic translation initiation factor 4F complex assembly","type":"exact"}],"termid":"GO:1905537"}


id: GO:0050796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of insulin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"insulin secretion","termid":"GO:0030073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of insulin secretion","secondary_identifiers":["Reactome:R-HSA-422356"],"termid":"GO:0050796"}


id: MONDO:0004536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete villoglandular variant cervical mucinous adenocarcinoma (obsolete MONDO:0004536)","termid":"MONDO:0004536","xrefs":{"Monarch":{"xref_id":"0004536"}}}


id: GO:0044365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change to the frequency, rate or extent of platelet aggregation in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation perturbing biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of platelet aggregation in another organism","synonyms":[{"name":"envenomation resulting in modulation of platelet aggregation in other organism","type":"exact"},{"name":"envenomation resulting in regulation of platelet aggregation in other organism","type":"exact"}],"termid":"GO:0044365"}


id: FYPO:0001716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of succinate into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal succinate import","termid":"FYPO:0001715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased succinate import","synonyms":[{"name":"decreased succinate import across plasma membrane","type":"exact"},{"name":"decreased succinate import during mitotic cell cycle","type":"related"},{"name":"decreased succinate import during vegetative growth","type":"exact"},{"name":"decreased succinate import into cell","type":"exact"},{"name":"decreased succinate uptake","type":"exact"},{"name":"decreased succinic acid import","type":"related"},{"name":"reduced succinate import","type":"exact"}],"termid":"FYPO:0001716"}


id: GO:0102254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: neoagarotetraose + H2O = 3,6-anhydro-alpha-L-galactopyranose + agarotriose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete neoagarotetraose 1,3-alpha-3,6-anhydro-L-galactosidase activity (obsolete GO:0102254)","termid":"GO:0102254"}


id: PBO:0042865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 97","termid":"PBO:0042865"}


id: PBO:0042068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC137 pseudogene 1","termid":"PBO:0042068"}


id: MONDO:0004986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the urinary bladder","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder cancer","termid":"MONDO:0001187"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urinary bladder carcinoma","secondary_identifiers":["MEDGEN:147071","UMLS:C0699885","NCIT:C4912","HP:0002862","DOID:4007","SCTID:255108000"],"synonyms":[{"name":"bladder cancer","type":"broad"},{"name":"bladder carcinoma","type":"exact"},{"name":"cancer of bladder","type":"broad"},{"name":"cancer of the bladder","type":"broad"},{"name":"cancer of the urinary bladder","type":"broad"},{"name":"cancer of urinary bladder","type":"broad"},{"name":"carcinoma bladder","type":"exact"},{"name":"carcinoma of bladder","type":"exact"},{"name":"carcinoma of the bladder","type":"exact"},{"name":"carcinoma of the urinary bladder","type":"exact"},{"name":"carcinoma of urinary bladder","type":"exact"},{"name":"urinary bladder cancer","type":"broad"},{"name":"urinary bladder carcinoma","type":"exact"}],"termid":"MONDO:0004986","xrefs":{"Monarch":{"xref_id":"0004986"}}}


id: PBO:0080814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 4","termid":"PBO:0080814"}


id: PBO:0064187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA pseudogene 1","termid":"PBO:0064187"}


id: GO:0016156
data:
  {"annotated_genes":["SJAG_00203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72829],"is_not":false,"summary":null,"term":"GO:0016156"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + succinate = fumarate + H+ + NADH.","definition_xrefs":["RHEA:18281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate dehydrogenase activity","termid":"GO:0000104"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fumarate reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:FUMARATE-REDUCTASE-NADH-RXN","KEGG_REACTION:R00402","EC:1.3.1.6"],"synonyms":[{"name":"NADH-dependent fumarate reductase activity","type":"related"}],"termid":"GO:0016156","terms_by_termid":{"GO:0016156":null}}


id: MOD:01377
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a (2S,3R,4S)-4-hydroxyisoleucine.","definition_xrefs":["RESID:AA0448","PubMed:363352","ChEBI:141844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated isoleucine","termid":"MOD:01415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R,4S)-4-hydroxyisoleucine","synonyms":[{"name":"(2S,3R,4S)-2-amino-3-methyl-4-hydroxyvaleric acid","type":"exact"},{"name":"(2S,3R,4S)-2-amino-4-hydroxy-3-methylpentanoic acid","type":"exact"},{"name":"(2S,3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"(3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"MOD_RES (3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"gamma-hydroxyisoleucine","type":"exact"}],"termid":"MOD:01377"}


id: PBO:0036038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0036038"}


id: PBO:0029080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0029080"}


id: PBO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcipressin (predicted)","termid":"PBO:0000202"}


id: PBO:0039179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 9","termid":"PBO:0039179"}


id: FYPO:0005776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing v.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on acetaldehyde","synonyms":[{"name":"normal cell population growth in presence of acetaldehyde","type":"exact"},{"name":"normal cell population growth on acetaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on acetaldehyde","type":"exact"}],"termid":"FYPO:0005776"}


id: PBO:0079636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 7","termid":"PBO:0079636"}


id: PATO:0000012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000012 absolute age (obsolete PATO:0000012)","termid":"PATO:0000012"}


id: MONDO:0024772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked, syndromic, Pilorge type","secondary_identifiers":["UMLS:C5676881","MEDGEN:1803486","OMIM:301076","DOID:0070422"],"synonyms":[{"name":"MRXSP","type":"exact"},{"name":"intellectual developmental disorder, X-linked, syndromic, Pilorge type","type":"exact"}],"termid":"MONDO:0024772","xrefs":{"Monarch":{"xref_id":"0024772"}}}


id: PBO:0085500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein arginine N-methyltransferase; exhibits septin and Hsl1p-dependent localization to the bud neck in budded cells and periodic Hsl1p-dependent phosphorylation; required with Hsl1p, and Elm1p for the mother-bud neck recruitment, phosphorylation, and degradation of Swe1p; responsible for symmetric dimethylation of histone H4 on Arg3; relocalizes away from bud neck upon DNA replication stress; human homolog PRMT5 can complement yeast hsl7 mutant","termid":"PBO:0085500"}


id: MONDO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A systemic mycosis that arises from infection in an immunologically normal host.","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mycosis","termid":"MONDO:0000256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary systemic mycosis","secondary_identifiers":["DOID:0050292"],"termid":"MONDO:0000308","xrefs":{"Monarch":{"xref_id":"0000308"}}}


id: GO:0034874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: thioacetamide S-oxide + O2 + 2 H+ + 2 e- = thioacetamide S,S-dioxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thioacetamide S-oxide S-oxygenase activity (obsolete GO:0034874)","termid":"GO:0034874"}


id: GO:0015603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an iron chelate from one side of a membrane to the other. An iron chelate is a heterocyclic compound having a metal ion attached by coordinate bonds to at least two nonmetal ions.","definition_xrefs":["PMID:17660286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}


id: PBO:0015241
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homooligomeric in h- cells","termid":"PBO:0015241"}


id: SO:0001145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The peptide twists in an clockwise, right handed manner. The dihedral angles for this turn are: Residue(i): -140 degrees < chi(1) -120 degrees < -20 degrees, +80 degrees psi +120 degrees < +180 degrees, residue(i+1): +20 degrees < phi < +140 degrees, -40 < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine_threonine_turn","termid":"SO:0001141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"st_turn_right_handed_type_two","secondary_identifiers":["BS:00233"],"synonyms":[{"name":"st turn right handed type two","type":"exact"},{"name":"st_turn_iir","type":"exact"}],"termid":"SO:0001145"}


id: MONDO:0018186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Aberrant chromosomes with no ends, i.e., circular.","definition_xrefs":["MESH:D012303"],"gene_count":0,"genotype_count":0,"name":"obsolete ring chromosome (obsolete MONDO:0018186)","secondary_identifiers":["Orphanet:363203"],"synonyms":[{"name":"supernumerary circular chromosome","type":"broad"}],"termid":"MONDO:0018186","xrefs":{"Monarch":{"xref_id":"0018186"}}}


id: GO:0005665
data:
  {"annotated_genes":["SJAG_00119","SJAG_01713","SJAG_04894","SJAG_02101","SJAG_04559","SJAG_04261","SJAG_00458","SJAG_01436","SJAG_02506","SJAG_01313","SJAG_04030","SJAG_01765","SJAG_02070"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70538,70856,72583,72998,74157,74900,75193,75433,76283,76782,77772,78627,112592],"is_not":false,"summary":null,"term":"GO:0005665"}]},"cv_name":"cellular_component","definition":"RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:krc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00458":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_04030":null,"SJAG_04261":null,"SJAG_04559":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005654"],"is_obsolete":false,"name":"RNA polymerase II, core complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase II, core complex","type":"exact"},{"name":"RNA polymerase II complex","type":"broad"},{"name":"RNAP II complex","type":"broad"}],"termid":"GO:0005665","terms_by_termid":{"GO:0005665":null}}


id: FYPO:0000043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which glucan biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"},{"relation_name":"is_a","term_name":"abnormal glucan synthesis","termid":"FYPO:0007904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal glucan synthesis during vegetative growth","synonyms":[{"name":"abnormal glucan synthesis during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000043"}


id: PBO:0088152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-ATPase assembly factor; functions with other V-ATPase assembly factors in the ER to efficiently assemble the V-ATPase membrane sector (V0); protein abundance increases in response to DNA replication stress","termid":"PBO:0088152"}


id: FYPO:0005970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing magnesium chloride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on magnesium chloride","synonyms":[{"name":"normal cell population growth in presence of magnesium chloride","type":"exact"},{"name":"normal cell population growth on MgCl2","type":"exact"},{"name":"normal cell population growth on magnesium chloride","type":"exact"},{"name":"normal cellular response to magnesium chloride","type":"related"},{"name":"normal growth on magnesium dichloride","type":"exact"},{"name":"normal vegetative cell population growth on magnesium chloride","type":"exact"}],"termid":"FYPO:0005970"}


id: FYPO:0005513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is increased during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during meiosis","termid":"FYPO:0004762"},{"relation_name":"is_a","term_name":"increased protein localization to centromere during meiotic cell cycle","termid":"FYPO:0005598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to kinetochore during meiosis","synonyms":[{"name":"increased protein localisation to kinetochore during meiosis","type":"exact"},{"name":"increased protein localization to kinetochore during meiotic nuclear division","type":"exact"},{"name":"increased protein localization to meiotic kinetochore","type":"exact"}],"termid":"FYPO:0005513"}


id: GO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a single subunit mitochondrial RNA polymerase enzyme, which is composed of a single catalytic subunit similar to the RNA polymerase enzymes from phages T3, T7, and SP6.","definition_xrefs":["GOC:txnOH","PMID:20701995","PMID:2088182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-subunit type RNA polymerase binding","termid":"GO:0001050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"mitochondrial single-subunit type RNA polymerase binding","termid":"GO:0001001"}


id: GO:0018599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyisobutyrate + 1/2 O2 = 2,3-dihydroxy-2-methyl propionate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxyisobutyrate 3-monooxygenase activity (obsolete GO:0018599)","termid":"GO:0018599"}


id: PBO:0057925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3650","termid":"PBO:0057925"}


id: PBO:0005896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal small subunit (predicted)","termid":"PBO:0005896"}


id: MONDO:0009445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis-hepatosplenomegaly-cerebellar degeneration syndrome is characterized by ichthyosis, hepatosplenomegaly and late-onset cerebellar ataxia. It has been described in two brothers. Transmission is either autosomal recessive or X-linked.","definition_xrefs":["Orphanet:2274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis-hepatosplenomegaly-cerebellar degeneration syndrome","secondary_identifiers":["OMIM:242520","SCTID:403779009","MEDGEN:266150","UMLS:C1275088","GARD:1993","ICD9:571.8","MESH:C535727"],"synonyms":[{"name":"Dykes Markes Harper syndrome","type":"related"},{"name":"Dykes-Markes-Harper syndrome","type":"exact"},{"name":"Dykes-Marks-Harper syndrome","type":"exact"},{"name":"ichthyosis, hepatosplenomegaly, and cerebellar degeneration","type":"related"}],"termid":"MONDO:0009445","xrefs":{"Monarch":{"xref_id":"0009445"}}}


id: GO:0034793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyclopropanecarboxylate + CoASH = cyclopropanecarboxyl-CoA + OH-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclopropanecarboxylate-CoA ligase activity (obsolete GO:0034793)","termid":"GO:0034793"}


id: PBO:0043186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citron rho-interacting serine/threonine kinase","termid":"PBO:0043186"}


id: GO:0018819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactoyl-CoA = acryloyl-CoA + H2O.","definition_xrefs":["RHEA:34691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactoyl-CoA dehydratase activity","secondary_identifiers":["EC:4.2.1.54","MetaCyc:LACTOYL-COA-DEHYDRATASE-RXN","UM-BBD_reactionID:r0086"],"synonyms":[{"name":"acrylyl coenzyme A hydratase activity","type":"related"},{"name":"lactoyl coenzyme A dehydratase activity","type":"related"},{"name":"lactoyl-CoA hydro-lyase (acryloyl-CoA-forming)","type":"related"},{"name":"lactoyl-CoA hydro-lyase activity","type":"related"},{"name":"lactyl CoA dehydratase activity","type":"related"},{"name":"lactyl-coenzyme A dehydrase activity","type":"related"}],"termid":"GO:0018819"}


id: MONDO:0013181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the WDR72 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta hypomaturation type 2A3","secondary_identifiers":["UMLS:C2750771","MEDGEN:416381","MESH:C567706","DOID:0110061","GARD:15630","OMIM:613211"],"synonyms":[{"name":"AI2A3","type":"exact"},{"name":"WDR72 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in WDR72","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type 2A3","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type IIA3","type":"exact"},{"name":"amelogenesis imperfecta type IIA3","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA3","type":"related"},{"name":"amelogenesis imperfecta, type IIA3","type":"exact"}],"termid":"MONDO:0013181","xrefs":{"Monarch":{"xref_id":"0013181"}}}


id: PBO:0078510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 4","termid":"PBO:0078510"}


id: GO:0042821
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114133],"is_not":false,"summary":null,"term":"GO:0042821"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, one of the vitamin B6 compounds.","definition_xrefs":["GOC:jl","PMID:21767669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal metabolic process","termid":"GO:0042817"},{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyridoxal biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxal anabolism","type":"exact"},{"name":"pyridoxal biosynthesis","type":"exact"},{"name":"pyridoxal formation","type":"exact"},{"name":"pyridoxal synthesis","type":"exact"}],"termid":"GO:0042821","terms_by_termid":{"GO:0042821":null}}


id: GO:0090554
data:
  {"annotated_genes":["SJAG_01731","SJAG_00669","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94190,97688,99955],"is_not":false,"summary":null,"term":"GO:0090554"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylcholine from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:ab","RHEA:38583","PMID:16452632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140303"],"is_obsolete":false,"name":"phosphatidylcholine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent phosphatidylcholine transporter activity","type":"broad"},{"name":"ATPase-coupled phosphatidylcholine transporter activity","type":"broad"},{"name":"phosphatidylcholine floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"},{"name":"phosphatidylcholine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090554","terms_by_termid":{"GO:0090554":null}}


id: FYPO:0006914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing terconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on terconazole","synonyms":[{"name":"normal cell population growth in presence of terconazole","type":"exact"},{"name":"normal cell population growth on terconazole","type":"exact"},{"name":"normal cellular response to terconazole","type":"related"},{"name":"normal vegetative cell population growth on terconazole","type":"exact"}],"termid":"FYPO:0006914"}


id: MONDO:0017516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of fingers","termid":"MONDO:0017451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of fingers, bilateral","secondary_identifiers":["Orphanet:295130","MEDGEN:1665318","UMLS:C4751023","icd11.foundation:412618992"],"synonyms":[{"name":"short fingers, bilateral","type":"exact"}],"termid":"MONDO:0017516","xrefs":{"Monarch":{"xref_id":"0017516"}}}


id: PBO:0041462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 95","termid":"PBO:0041462"}


id: PBO:0043080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 10 subunit","termid":"PBO:0043080"}


id: MONDO:0016539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hypotonia-cystinuria syndrome characterized by mild to moderate intellectual disability in addition to classic hypotonia-cystinuria syndrome phenotype (cystinuria type 1, generalized hypotonia, poor feeding, growth retardation, and minor facial dysmorphism).","definition_xrefs":["Orphanet:238523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonia-cystinuria syndrome","termid":"MONDO:0011669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0004069"],"is_obsolete":false,"name":"atypical hypotonia-cystinuria syndrome","secondary_identifiers":["GARD:17175","MEDGEN:1668791","icd11.foundation:1982772708","UMLS:C4755274"],"synonyms":[{"name":"atypical HCS","type":"exact"}],"termid":"MONDO:0016539","xrefs":{"Monarch":{"xref_id":"0016539"}}}


id: PBO:0074033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 20","termid":"PBO:0074033"}


id: GO:0007130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"synaptonemal complex organization","termid":"GO:0070193"},{"relation_name":"part_of","term_name":"homologous chromosome pairing at meiosis","termid":"GO:0007129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013","GO:0044085"],"is_obsolete":false,"name":"synaptonemal complex assembly","synonyms":[{"name":"synaptonemal complex formation","type":"exact"}],"termid":"GO:0007130"}


id: PBO:0079974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 12","termid":"PBO:0079974"}


id: MOD:01740
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01740"}


id: PR:O74359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC28E12.02 gene.","definition_xrefs":["UniProtKB:O74359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 60 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.02","synonyms":[{"name":"Spom972h-SPBC28E12.02","type":"exact"}],"termid":"PR:O74359"}


id: GO:0150168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K4 acetylation.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K4 acetylation (obsolete GO:0150168)","termid":"GO:0150168"}


id: GO:0097354
data:
  {"annotated_genes":["SJAG_02583","SJAG_03810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61328,67689],"is_not":false,"summary":null,"term":"GO:0097354"}]},"cv_name":"biological_process","definition":"The covalent attachment of a prenyl group to a molecule; geranyl, farnesyl, or geranylgeranyl groups may be added.","definition_xrefs":["PMID:22660767","PMID:18029206","GOC:di","PMID:21351751","PMID:22123822","PMID:22642693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_03810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylation","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:0097354","terms_by_termid":{"GO:0097354":null}}


id: PBO:0110257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC associated protein Ctr1","termid":"PBO:0110257"}


id: PBO:0047180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 200 member A","termid":"PBO:0047180"}


id: PBO:0006188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_downstream_target","termid":"PBO:0006188"}


id: GO:0044865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of cell division in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24218612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cell division","synonyms":[{"name":"inhibition by virus of host cell division","type":"narrow"},{"name":"negative regulation by virus of host cell division","type":"narrow"}],"termid":"GO:0044865"}


id: GO:0010919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of inositol phosphate biosynthetic process","synonyms":[{"name":"regulation of inositol phosphate biosynthesis","type":"exact"}],"termid":"GO:0010919"}


id: GO:0010743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:add","GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"macrophage derived foam cell differentiation","termid":"GO:0010742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage derived foam cell differentiation","termid":"GO:0010743"}


id: SO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type I:A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles: Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees. Residue(i+2): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_right_handed_type_one","secondary_identifiers":["BS:00216"],"synonyms":[{"name":"beta turn right handed type one","type":"exact"},{"name":"beta_turn_ir","type":"exact"},{"name":"type I beta turn","type":"exact"},{"name":"type I turn","type":"exact"}],"termid":"SO:0001136"}


id: PBO:0086679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; deletion exhibits slow-growth phenotype; computationally predicted to have a role in cell budding","termid":"PBO:0086679"}


id: MONDO:1012182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial myopathy, non-human animal","termid":"MONDO:1011791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial myopathy, dog","secondary_identifiers":["OMIA:000695-9615"],"termid":"MONDO:1012182","xrefs":{"Monarch":{"xref_id":"1012182"}}}


id: MONDO:0005782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete HELLP syndrome (obsolete MONDO:0005782)","termid":"MONDO:0005782","xrefs":{"Monarch":{"xref_id":"0005782"}}}


id: PBO:0063724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone receptor membrane component 2","termid":"PBO:0063724"}


id: PATO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating in a point or edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharpness","termid":"PATO:0000944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sharp","termid":"PATO:0001419"}


id: MONDO:0014935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any frontometaphyseal dysplasia in which the cause of the disease is a mutation in the MAP3K7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontometaphyseal dysplasia","termid":"MONDO:0015942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontometaphyseal dysplasia 2","secondary_identifiers":["OMIM:617137","GARD:16199","DOID:0111787","MEDGEN:934664","UMLS:C4310697"],"synonyms":[{"name":"FMD2","type":"exact"},{"name":"Frontometaphyseal dysplasia 2","type":"exact"},{"name":"Frontometaphyseal dysplasia type 2","type":"exact"},{"name":"MAP3K7 frontometaphyseal dysplasia","type":"exact"},{"name":"frontometaphyseal dysplasia 2; FMD2","type":"exact"},{"name":"frontometaphyseal dysplasia caused by mutation in MAP3K7","type":"exact"}],"termid":"MONDO:0014935","xrefs":{"Monarch":{"xref_id":"0014935"}}}


id: GO:0007604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons from UV light into a molecular signal; ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 400 nanometers.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototransduction","termid":"GO:0007602"},{"relation_name":"is_a","term_name":"detection of UV","termid":"GO:0009589"},{"relation_name":"is_a","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phototransduction, UV","synonyms":[{"name":"UV-sensitive opsin","type":"related"},{"name":"phototransduction, UV light","type":"exact"},{"name":"phototransduction, UV radiation","type":"exact"},{"name":"phototransduction, ultraviolet light","type":"exact"},{"name":"phototransduction, ultraviolet radiation","type":"exact"}],"termid":"GO:0007604"}


id: PBO:0048058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 7","termid":"PBO:0048058"}


id: PR:G2TRR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microsomal signal peptidase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.22","synonyms":[{"name":"Spom972h-new19","type":"exact"}],"termid":"PR:G2TRR4"}


id: MONDO:0021195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease by cellular process disrupted (obsolete MONDO:0021195)","termid":"MONDO:0021195","xrefs":{"Monarch":{"xref_id":"0021195"}}}


id: PR:Q9UTG5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1805.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTG5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1805.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.10","synonyms":[{"name":"Spom972h-SPAC1805.10","type":"exact"}],"termid":"PR:Q9UTG5"}


id: MOD:01956
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to (3R)-3-hydroxy-L-arginine.","definition_xrefs":["PubMed:23103944","PubMed:786730","RESID:AA0601","PubMed:10094780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated arginine","termid":"MOD:00682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(3R)-3-hydroxy-L-arginine","synonyms":[{"name":"(2S,3R)-2-amino-5-[(diaminomethylidene)amino]-3-hydroxypentanoic acid","type":"exact"},{"name":"(3R)-3-hydroxy-L-arginine","type":"exact"},{"name":"2-amino-5-(carbamimidamido)-3-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-[(aminoiminomethyl)amino]-3-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-guanidino-3-hydroxypentanoic acid","type":"exact"},{"name":"C(beta)-hydroxyarginine","type":"exact"},{"name":"MOD_RES (3R)-3-hydroxyarginine","type":"exact"},{"name":"beta-hydroxyarginine","type":"exact"}],"termid":"MOD:01956"}


id: MOD:01171
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-acetyl-L-threonine.","definition_xrefs":["PubMed:16728640","RESID:AA0423","Unimod:1#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetylated residue","termid":"MOD:00644"},{"relation_name":"is_a","term_name":"acetylated L-threonine","termid":"MOD:01186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl-L-threonine","synonyms":[{"name":"(2S,3R)-3-(acetyloxy)-2-aminobutanoic acid","type":"exact"},{"name":"ACT_SITE O-acetylthreonine intermediate","type":"exact"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES O-acetylthreonine","type":"exact"},{"name":"O-acetyl-L-threonine","type":"exact"},{"name":"O-acetylthreonine","type":"exact"},{"name":"OAcThr","type":"exact"},{"name":"threonine acetate ester","type":"exact"}],"termid":"MOD:01171"}


id: GO:0050654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chondroitin sulfate proteoglycans, which have glycosaminoglycan repeat units consisting of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate. Chondroitin sulfates are a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan metabolic process","synonyms":[{"name":"chondroitin sulfate proteoglycan metabolism","type":"exact"},{"name":"chondroitin sulphate proteoglycan metabolic process","type":"exact"},{"name":"chondroitin sulphate proteoglycan metabolism","type":"exact"}],"termid":"GO:0050654"}


id: MOD:00632
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because this chemical derivative modification from Unimod 321 is deprecated.","definition_xrefs":["Unimod:321"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00632 N-succinimide (obsolete MOD:00632)","termid":"MOD:00632"}


id: GO:0048166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when the antrum is swollen with follicular fluid. The ovum is ready to erupt from the ovary and is arrested at metaphase of the second meiotic division.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature follicle stage","synonyms":[{"name":"mammalian oogenesis stage 9","type":"exact"}],"termid":"GO:0048166"}


id: GO:0140604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the coenzyme mycofactocin, a variably glycosylated small molecule electron pair carrier derived from the C-terminal valine-tyrosine dipeptide of the ribosomally translated precursor peptide MftA.","definition_xrefs":["PMID:30183269","PMID:30778644","PMID:21223593","PMID:27312813","PMID:31381312","PMID:33014324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mycofactocin biosynthetic process","termid":"GO:0140604"}


id: PBO:0062003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 2","termid":"PBO:0062003"}


id: GO:1990818
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97112],"is_not":false,"summary":null,"term":"GO:1990818"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:26083598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-arginine transmembrane export from vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990818","terms_by_termid":{"GO:1990818":null}}


id: SOFP:score
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A GFF3 score","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"score","termid":"SOFP:score"}


id: GO:0036370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding a D-alanine and presenting it for processing or offloading to a cognate enzyme. Covalently binds the D-alanine via a phosphopantetheine prosthetic group and mediates protein-protein interactions with the enzyme conferring specificity. The carrier protein provides an essential link between the D-alanine-D-alanyl carrier protein ligase and the incorporation of D-alanine into lipoteichoic acid by transferring activated D-alanine to cell membrane phosphatidylglycerol (PG).","definition_xrefs":["GOC:crds","PMID:8682792","PMID:22750871","PMID:11222605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphopantetheine-dependent carrier activity","termid":"GO:0140414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"D-alanyl carrier activity","synonyms":[{"name":"D-alanyl carrier protein","type":"related"}],"termid":"GO:0036370"}


id: PBO:0085465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predominantly nucleolar DEAH-box ATP-dependent RNA helicase; required for 18S rRNA synthesis","termid":"PBO:0085465"}


id: PBO:0050820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 6, pseudogene","termid":"PBO:0050820"}


id: PBO:0035747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_eMTOC_present_in_decreased_numbers","termid":"PBO:0035747"}


id: PBO:0063628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 4","termid":"PBO:0063628"}


id: MONDO:1040037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by autosomal recessive variants in the IMPG1 gene.","definition_xrefs":["PMID:23993198","PMID:28644393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"IMPG1-related recessive retinopathy","synonyms":[{"name":"IMPG1-related recessive retinopathy","type":"exact"}],"termid":"MONDO:1040037","xrefs":{"Monarch":{"xref_id":"1040037"}}}


id: MONDO:0010565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Protanopia is a severe type of color vision deficiency caused by the complete absence of red retinal photoreceptors. Protans have difficulties distinguishing between blue and green colors and also between red and green colors. It is a form of dichromatism in which the subject can only perceive light wavelengths from 400 to 650 nm, instead of the usual 700 nm. Pure reds cannot be seen, instead appearing black; purple colors cannot be distinguished from blues; more orange-tinted reds may appear as very dim yellows, and all orange-yellow-green shades of too long a wavelength to stimulate the blue receptors appear as a similar yellow hue. It is hereditary, sex-linked, and present in 1% of males.","definition_xrefs":["EFO:0005580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color vision disorder","termid":"MONDO:0001703"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"red color blindness","secondary_identifiers":["OMIM:303900","DOID:13910","ICD9:368.51","ICD10CM:H53.54","UMLS:C0155015","SCTID:51445007","MEDGEN:56350","Orphanet:319691"],"synonyms":[{"name":"CBP","type":"related"},{"name":"colorblindness, partial, protan series","type":"related"},{"name":"colorblindness, protan","type":"exact"},{"name":"partial achromatopsia, protan type","type":"exact"},{"name":"protan defect","type":"exact"},{"name":"protanomaly","type":"related"},{"name":"protanopia","type":"exact"},{"name":"red color blindness","type":"exact"},{"name":"red colorblindness","type":"related"}],"termid":"MONDO:0010565","xrefs":{"Monarch":{"xref_id":"0010565"}}}


id: MONDO:1012224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive cerebellar abiotrophy, non-human animal","termid":"MONDO:1011857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive cerebellar abiotrophy, pig","secondary_identifiers":["OMIA:000826-9823"],"termid":"MONDO:1012224","xrefs":{"Monarch":{"xref_id":"1012224"}}}


id: GO:0106297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of resolvin family E-series, hydroxy fatty acids derived from icosapentaenoic acid.","definition_xrefs":["PMID:21206090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resolvin biosynthetic process","termid":"GO:0106295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"E-series resolvin biosynthetic process","termid":"GO:0106297"}


id: MONDO:0859310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome 19","secondary_identifiers":["OMIM:620107","UMLS:C5774248","DOID:0060960","MEDGEN:1824021"],"termid":"MONDO:0859310","xrefs":{"Monarch":{"xref_id":"0859310"}}}


id: PBO:0070087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 1","termid":"PBO:0070087"}


id: MONDO:0018813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"high grade B-cell lymphoma with MYC and/ or BCL2 and/or BCL6 rearrangement","secondary_identifiers":["Orphanet:480541","MEDGEN:1617477","GARD:21980","UMLS:C4524190"],"termid":"MONDO:0018813","xrefs":{"Monarch":{"xref_id":"0018813"}}}


id: PBO:0044768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 50 pseudogene 2","termid":"PBO:0044768"}


id: PATO:0000019
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A chromatic property that is the relative position of different hues or degrees of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"color pattern","termid":"PATO:0000019"}


id: PBO:0088326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, MADS-box Map1","termid":"PBO:0088326"}


id: GO:0070561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by vitamin D binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","PMID:12637589","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"},{"relation_name":"part_of","term_name":"cellular response to vitamin D","termid":"GO:0071305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"vitamin D receptor signaling pathway","synonyms":[{"name":"VDR signaling pathway","type":"exact"},{"name":"calcitriol signaling pathway","type":"narrow"},{"name":"intracellular vitamin D receptor signaling pathway","type":"exact"},{"name":"nuclear receptor-mediated vitamin D signaling pathway","type":"exact"},{"name":"vitamin D receptor signalling pathway","type":"exact"}],"termid":"GO:0070561"}


id: PBO:0029110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_process","termid":"PBO:0029110"}


id: PBO:0066231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 39","termid":"PBO:0066231"}


id: FYPO:0007131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends end of microtubules is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to microtubule plus-end","synonyms":[{"name":"increased protein localisation to microtubule plus-end","type":"exact"},{"name":"increased protein localization to microtubule plus end","type":"exact"},{"name":"increased protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"increased protein localization to microtubule plus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0007131"}


id: PBO:0070524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 23","termid":"PBO:0070524"}


id: MONDO:0009185
data:
  {"annotated_genes":["SJAG_04454"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85217],"is_not":false,"summary":null,"term":"MONDO:0009185"}]},"cv_name":"mondo","definition":"Kohlschütter-TC6nz syndrome (KTS) is a genetically heterogeneous autosomal recessive syndrome characterized by the triad of amelogenesis imperfect, infantile onset epilepsy, intellectual disability with or without regression and dementia.","definition_xrefs":["Orphanet:1946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"amelocerebrohypohidrotic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111668","GARD:3128","MESH:C537213","OMIM:226750","UMLS:C0406740","MEDGEN:98036","SCTID:109478007"],"synonyms":[{"name":"KOHLSCHUTTER-Tonz syndrome","type":"related"},{"name":"KTZS","type":"related"},{"name":"Kohlschutter Tonz syndrome","type":"related"},{"name":"Kohlschutter syndrome","type":"related"},{"name":"Kohlschutter-Tonz syndrome","type":"exact"},{"name":"amelocerebrohypohidrotic syndrome","type":"exact"},{"name":"epilepsy and Yellow teeth","type":"related"},{"name":"epilepsy dementia amelogenesis imperfecta","type":"related"},{"name":"epilepsy, dementia, and amelogenesis imperfecta","type":"related"},{"name":"epilepsy-dementia-amelogenesis imperfecta syndrome","type":"exact"}],"termid":"MONDO:0009185","terms_by_termid":{"MONDO:0009185":null},"xrefs":{"Monarch":{"xref_id":"0009185"}}}


id: GO:0001751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an eye photoreceptor cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}


id: PBO:0051856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 2","termid":"PBO:0051856"}


id: PBO:0069470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 737, pseudogene","termid":"PBO:0069470"}


id: PBO:0082919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c heme lyase (holocytochrome c synthase); attaches heme to apo-cytochrome c (Cyc1p or Cyc7p) in mitochondrial intermembrane space; human homolog HCCS implicated in microphthalmia with linear skin defects (MLS), and can complement yeast null mutant","termid":"PBO:0082919"}


id: PBO:0052639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 7","termid":"PBO:0052639"}


id: PBO:0114441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type proton ATPase, P3-type Pma2","termid":"PBO:0114441"}


id: PBO:0061443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 2 group F member 2","termid":"PBO:0061443"}


id: PBO:0058549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6128","termid":"PBO:0058549"}


id: PBO:0090345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop5","termid":"PBO:0090345"}


id: MONDO:0010555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachytelephalangic chondrodysplasia punctata (BCDP) is a form of nonrhizomelic chondrodysplasia punctata, a primary bone dysplasia, characterized by hypoplasia of the distal phalanges of the fingers, nasal hypoplasia, epiphyseal stippling appearing in the first year of life, and mild and nonrhizomelic shortness of the long bones.","definition_xrefs":["Orphanet:79345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked chondrodysplasia punctata","termid":"MONDO:0010556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"X-linked chondrodysplasia punctata 1","secondary_identifiers":["UMLS:C3669395","GARD:1296","NANDO:2201356","MEDGEN:777171","NANDO:2201360","OMIM:302950"],"synonyms":[{"name":"ARSE X-linked chondrodysplasia punctata","type":"exact"},{"name":"CDPX1","type":"related"},{"name":"CPXR","type":"related"},{"name":"Cpxr","type":"related"},{"name":"X-linked chondrodysplasia punctata 1","type":"exact"},{"name":"X-linked chondrodysplasia punctata caused by mutation in ARSE","type":"exact"},{"name":"X-linked chondrodysplasia punctata caused by mutation in arse","type":"exact"},{"name":"arse X-linked chondrodysplasia punctata","type":"exact"},{"name":"arylsulfatase E deficiency","type":"related"},{"name":"brachytelephalangic chondrodysplasia punctata","type":"exact"},{"name":"chondrodysplasia punctata 1 X-linked recessive","type":"related"},{"name":"chondrodysplasia punctata 1, X-linked recessive","type":"related"},{"name":"chondrodysplasia punctata brachytelephalangic","type":"related"},{"name":"chondrodysplasia punctata, Brachytelephalangic","type":"related"},{"name":"chondrodysplasia punctata, X-linked recessive, X-linked recessive","type":"exact"},{"name":"chondrodysplasia punctata, brachytelephalangic","type":"related"}],"termid":"MONDO:0010555","xrefs":{"Monarch":{"xref_id":"0010555"}}}


id: GO:0033668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of host apoptosis, leading to a decrease in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host programmed cell death","termid":"GO:0052041"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host apoptosis","termid":"GO:0052150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host apoptosis","secondary_identifiers":["Reactome:R-HSA-9635465","GO:0039650"],"synonyms":[{"name":"down regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"down-regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"downregulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"inhibition by organism of host apoptotic programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of host apoptosis","type":"exact"},{"name":"negative regulation by symbiont of host apoptotic process","type":"exact"},{"name":"negative regulation by virus of host apoptosis","type":"narrow"},{"name":"suppression by symbiont of host apoptotic process","type":"exact"},{"name":"suppression by virus of host apoptosis","type":"narrow"}],"termid":"GO:0033668"}


id: GO:0018710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetone + ATP + CO2 + 2 H2O = acetoacetate + AMP + 4 H+ + 2 phosphate.","definition_xrefs":["RHEA:18385","EC:6.4.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetone carboxylase activity","secondary_identifiers":["KEGG_REACTION:R05735","MetaCyc:6.4.1.6-RXN"],"synonyms":[{"name":"acetone:carbon-dioxide ligase (AMP-forming)","type":"related"}],"termid":"GO:0018710"}


id: PATO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis and towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotational curvature","termid":"PATO:0001787"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral and rotional curvature","termid":"PATO:0002049"}


id: GO:0035060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains 8 to 14 proteins, including both conserved (core) and nonconserved components; contains the ATPase product of the Drosophila brm (brahma) or mammalian SMARCA2/BAF190B/BRM gene, or an ortholog thereof.","definition_xrefs":["GOC:bhm","PMID:10809665","PMID:12482982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"brahma complex","synonyms":[{"name":"BRM complex","type":"exact"}],"termid":"GO:0035060"}


id: PR:Q9P7H4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypa2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase 2A activator 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.05","synonyms":[{"name":"PPIase PTPA-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypa2","type":"exact"},{"name":"peptidyl-prolyl cis-trans isomerase PTPA-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphotyrosyl phosphatase activator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase PTPA-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7H4"}


id: MONDO:0958332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromuscular disorder, congenital, with dysmorphic facies","secondary_identifiers":["OMIM:620775","UMLS:C5935643","MEDGEN:1857169"],"termid":"MONDO:0958332","xrefs":{"Monarch":{"xref_id":"0958332"}}}


id: GO:0033542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:PWY-5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}


id: PBO:0052182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 15","termid":"PBO:0052182"}


id: MONDO:0005036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the stomach","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric adenocarcinoma","secondary_identifiers":["UMLS:C0278701","ONCOTREE:STAD","EFO:0000503","MEDGEN:82961","Orphanet:464463","DOID:3717","SCTID:408647009","NCIT:C4004"],"synonyms":[{"name":"STAD","type":"related"},{"name":"adenocarcinoma - stomach","type":"exact"},{"name":"adenocarcinoma of stomach","type":"exact"},{"name":"adenocarcinoma of the stomach","type":"exact"},{"name":"gastric (stomach) adenocarcinoma","type":"exact"},{"name":"gastric adenocarcinoma","type":"exact"},{"name":"stomach adenocarcinoma","type":"exact"}],"termid":"MONDO:0005036","xrefs":{"Monarch":{"xref_id":"0005036"}}}


id: PBO:0046924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 41 member C","termid":"PBO:0046924"}


id: MONDO:0009125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dopamine beta-hydroxylase, plasma, thermolability of (obsolete MONDO:0009125)","secondary_identifiers":["OMIM:223380"],"synonyms":[{"name":"dopamine beta-hydroxylase, plasma, thermolability of","type":"exact"}],"termid":"MONDO:0009125","xrefs":{"Monarch":{"xref_id":"0009125"}}}


id: PR:Q09841
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01803","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.07","secondary_identifiers":["UniProtKB:Q09841"],"synonyms":[{"name":"Spom972h-PSMB7","type":"exact"}],"termid":"PR:Q09841"}


id: PBO:0053534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 536","termid":"PBO:0053534"}


id: PBO:0065470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 10 pseudogene 1","termid":"PBO:0065470"}


id: GO:0002450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"},{"relation_name":"part_of","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell antigen processing and presentation","synonyms":[{"name":"B lymphocyte antigen processing and presentation","type":"exact"},{"name":"B-cell antigen processing and presentation","type":"exact"},{"name":"B-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002450"}


id: PBO:0082780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SWR1 complex; complex exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082780"}


id: FYPO:0001710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is stabilized, i.e. interactions between the iron-sulfur cluster and the gene product last longer than in wild type under any given set of conditions. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"stabilized iron-sulfur cluster binding","synonyms":[{"name":"increased duration of iron-sulfur cluster binding","type":"exact"},{"name":"stabilised iron-sulfur cluster binding","type":"exact"},{"name":"stabilized iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0001710"}


id: GO:0039546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by a virus resulting in the hydrolysis of the host MAVS (mitochondrial inhibitor of viral signaling) protein by cleavage of peptide bonds, thereby inhibiting the host innate immune response. For example, MAVS harbors a C-terminal transmembrane domain that targets it to the mitochondrial outer membrane; cleavage within this domain removes MAVS from the membrane, thus preventing it from signaling.","definition_xrefs":["PMID:22238314","PMID:21436888"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host MAVS activity by MAVS proteolysis (obsolete GO:0039546)","synonyms":[{"name":"viral protease cleavage of MAVS","type":"exact"}],"termid":"GO:0039546"}


id: GO:0015134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of hexuronates from one side of a membrane to the other. A hexuronate is any monocarboxylic acid derived from a hexose by oxidation of C-6.","definition_xrefs":["ISBN:0198506732","GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uronic acid transmembrane transporter activity","termid":"GO:0015133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"hexuronate transmembrane transporter activity","secondary_identifiers":["GO:0015163"],"synonyms":[{"name":"hexuronide transmembrane transporter activity","type":"exact"}],"termid":"GO:0015134"}


id: MONDO:1012029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bleeding disorder, non-human animal","termid":"MONDO:1011685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, pig","secondary_identifiers":["OMIA:000113-9823"],"termid":"MONDO:1012029","xrefs":{"Monarch":{"xref_id":"1012029"}}}


id: PBO:0072498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 27","termid":"PBO:0072498"}


id: GO:0032929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide anion generation","termid":"GO:0032928"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species metabolic process","termid":"GO:2000378"},{"relation_name":"negatively_regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of superoxide anion generation","synonyms":[{"name":"down regulation of superoxide release","type":"exact"},{"name":"down-regulation of superoxide release","type":"exact"},{"name":"downregulation of superoxide release","type":"exact"},{"name":"inhibition of superoxide release","type":"narrow"},{"name":"negative regulation of superoxide release","type":"exact"}],"termid":"GO:0032929"}


id: MONDO:0004946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally low level of glucose in the blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypoglycemia","secondary_identifiers":["DOID:9993","ICD9:251.1","MESH:D007003","ICD9:251.2","SCTID:302866003","NCIT:C3126","MEDGEN:6979","UMLS:C0020615"],"synonyms":[{"name":"blood glucose, Low","type":"exact"},{"name":"glucose, Low blood","type":"exact"},{"name":"hypoglycaemia","type":"exact"},{"name":"low blood glucose","type":"exact"}],"termid":"MONDO:0004946","xrefs":{"Monarch":{"xref_id":"0004946"}}}


id: GO:0005722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A diffusely banded region of heterochromatin located between euchromatin and alpha-heterochromatin in the polytene chromosome chromocenter; normally replicated during polytenization.","definition_xrefs":["PMID:8878678","PMID:11404334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericentric heterochromatin","termid":"GO:0005721"},{"relation_name":"part_of","term_name":"polytene chromosome chromocenter","termid":"GO:0005701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"beta-heterochromatin","termid":"GO:0005722"}


id: GO:0075033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont partition is formed to separate the appressorium from the germination tube, occurring during appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete appressorium septum formation (obsolete GO:0075033)","synonyms":[{"name":"septum formation during appressorium formation on or near host","type":"related"},{"name":"septum formation involved in appressorium formation","type":"exact"},{"name":"septum formation involved in appressorium formation on or near host","type":"exact"}],"termid":"GO:0075033"}


id: GO:0003328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a pancreatic D cell fate and its capacity to differentiate into a pancreatic D cell. A delta cell is a cell of the pancreas that produces somatostatin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"pancreatic D cell differentiation","termid":"GO:0003311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic D cell fate commitment","termid":"GO:0003328"}


id: FYPO:0006464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which telomere length is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during vegetative growth","termid":"FYPO:0002254"},{"relation_name":"is_a","term_name":"abnormal telomere length","termid":"FYPO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"abnormal telomere length during vegetative growth","synonyms":[{"name":"abnormal telomere length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006464"}


id: MONDO:0032678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of glutamine metabolism","termid":"MONDO:0017352"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"glutaminase deficiency","termid":"MONDO:0600001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 71","secondary_identifiers":["GARD:17994","MEDGEN:1680812","OMIM:618328","Orphanet:557064","UMLS:C5193030","DOID:0112207"],"synonyms":[{"name":"DEE71","type":"exact"},{"name":"EIEE71","type":"exact"},{"name":"Glutaminase Deficiency With Neonatal Epileptic Encephalopathy","type":"related"},{"name":"developmental and epileptic encephalopathy 71","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 71","type":"exact"},{"name":"neonatal epileptic encephalopathy due to glutaminase deficiency","type":"exact"}],"termid":"MONDO:0032678","xrefs":{"Monarch":{"xref_id":"0032678"}}}


id: PBO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_negative_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0030270"}


id: GO:0004243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal octapeptide as second stage of processing of some proteins imported in the mitochondrion.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial intermediate peptidase activity (obsolete GO:0004243)","synonyms":[{"name":"MIP","type":"broad"},{"name":"mitochondrial intermediate peptidase activity","type":"exact"},{"name":"mitochondrial intermediate precursor-processing proteinase activity","type":"related"}],"termid":"GO:0004243"}


id: GO:0120286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of tryptophan.","definition_xrefs":["PMID:31498992","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid sensor activity","termid":"GO:0140785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140299","GO:0003674"],"is_obsolete":false,"name":"tryptophan sensor activity","synonyms":[{"name":"tryptophan sensing activity","type":"exact"}],"termid":"GO:0120286"}


id: PBO:0072486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 15","termid":"PBO:0072486"}


id: GO:0016634
data:
  {"annotated_genes":["SJAG_04944","SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004109"},{"annotations":[72310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004729"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["EC:1.3.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02876":null,"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016634","terms_by_termid":{"GO:0004109":null,"GO:0004729":null}}


id: PBO:0045945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFR3 homolog B","termid":"PBO:0045945"}


id: PBO:0064744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 80","termid":"PBO:0064744"}


id: PBO:0070935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 43","termid":"PBO:0070935"}


id: PBO:0069863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1150, pseudogene","termid":"PBO:0069863"}


id: PBO:0045157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 12","termid":"PBO:0045157"}


id: GO:0102502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ADP alpha-D-glucoside + n a 1,4-alpha-D-glucan = ADP + n alpha-amylose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-glucose-starch glucosyltransferase activity (obsolete GO:0102502)","termid":"GO:0102502"}


id: PBO:0058752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6876","termid":"PBO:0058752"}


id: GO:2001146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (obsolete GO:2001146)","termid":"GO:2001146"}


id: PBO:0045861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 2","termid":"PBO:0045861"}


id: GO:0047605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxy-2-methyl-3-oxobutanoate = (R)-2-acetoin + CO2.","definition_xrefs":["EC:4.1.1.5","MetaCyc:ACETOLACTATE-DECARBOXYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetolactate decarboxylase activity","secondary_identifiers":["RHEA:21580"],"synonyms":[{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase [(R)-2-acetoin-forming]","type":"related"},{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase activity","type":"related"},{"name":"alpha-acetolactate decarboxylase activity","type":"related"}],"termid":"GO:0047605"}


id: PBO:0081802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 731, pseudogene","termid":"PBO:0081802"}


id: PBO:0055747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA activating regulator of DKK1","termid":"PBO:0055747"}


id: GO:0018413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The O-glucuronidation of peptidyl-serine to form peptidyl-O3-D-glucuronyl-L-serine.","definition_xrefs":["RESID:AA0291"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine O-glucuronidation (obsolete GO:0018413)","termid":"GO:0018413"}


id: FYPO:0001853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription does not occur when the cell is subject to iron ion starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription during vegetative growth","termid":"FYPO:0001443"},{"relation_name":"is_a","term_name":"decreased transcription during iron starvation","termid":"FYPO:0001852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished transcription during iron starvation","synonyms":[{"name":"abolished transcription during iron depletion","type":"exact"},{"name":"abolished transcription during iron deprivation","type":"exact"},{"name":"abolished transcription during iron ion starvation","type":"exact"},{"name":"abolished transcription during iron starvation during mitotic cell cycle","type":"related"},{"name":"abolished transcription during iron starvation during vegetative growth","type":"exact"},{"name":"transcription abolished during iron starvation","type":"exact"}],"termid":"FYPO:0001853"}


id: PBO:0089351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoenolpyruvate transmembrane transporter Pet1","termid":"PBO:0089351"}


id: GO:1990463
data:
  {"annotated_genes":["SJAG_04947","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99847,104282],"is_not":false,"summary":null,"term":"GO:1990463"}]},"cv_name":"cellular_component","definition":"A protein complex that is anchored at the cortical face of the plasma membrane, and contains proteins involved in regulating cell cycle progression. In Schizosaccharomyces pombe, lateral cortical nodes are several megadaltons in size, and contain Slf1, which anchors the complex at the membrane, and the methyltransferase Skb1 in stoichiometric quantities, and may contain other proteins.","definition_xrefs":["GOC:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"lateral cell cortex","termid":"GO:0097575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"lateral cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Skb1-containing cortical node","type":"exact"}],"termid":"GO:1990463","terms_by_termid":{"GO:1990463":null}}


id: MONDO:0016040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Harlequin syndrome (HSD) is an autonomic disorder occurring at any age and characterized by unilateral flushing and sweating, involving the face and sometimes arm and chest, in condition of thermal, exercise or emotional stress without sympathetic ocular manifestations. However, tonic pupils, parasympathetic oculomotor lesion and pre- or postganglionic sudomotor sympathetic deficit can rarely occur.","definition_xrefs":["Orphanet:199282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"harlequin syndrome","secondary_identifiers":["MEDGEN:384475","SCTID:14070001000004105","ICD9:705.89","MESH:C535634","GARD:8610","UMLS:C2029348"],"synonyms":[{"name":"progressive isolated segmental anhidrosis","type":"exact"},{"name":"sudden onset of unilateral flushing and sweating","type":"related"},{"name":"unilateral loss of facial flushing and sweating with contralateral anhidrosis","type":"related"}],"termid":"MONDO:0016040","xrefs":{"Monarch":{"xref_id":"0016040"}}}


id: PBO:0080787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 7","termid":"PBO:0080787"}


id: MONDO:0011649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete AVSD 1 (obsolete MONDO:0011649)","termid":"MONDO:0011649","xrefs":{"Monarch":{"xref_id":"0011649"}}}


id: MONDO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the epithelial cell","direct_ancestors":[{"relation_name":"is_a","term_name":"ethmoid sinus cancer","termid":"MONDO:0001763"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ethmoid sinus adenocarcinoma","secondary_identifiers":["NCIT:C6237","UMLS:C1333472","MEDGEN:272595","DOID:2766"],"synonyms":[{"name":"adenocarcinoma of ethmoid sinus","type":"related"},{"name":"adenocarcinoma of the ethmoid sinus","type":"exact"}],"termid":"MONDO:0002418","xrefs":{"Monarch":{"xref_id":"0002418"}}}


id: PBO:0080770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked Kx blood group antigen, Kell and VPS13A binding protein","termid":"PBO:0080770"}


id: PBO:0047132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 171 member A1","termid":"PBO:0047132"}


id: GO:0032131
data:
  {"annotated_genes":["SJAG_04778","SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101331],"is_not":false,"summary":null,"term":"GO:0032131"},{"annotations":[87938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032132"}]},"cv_name":"molecular_function","definition":"Binding to an alkylated residue in DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_04778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alkylated DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032131","terms_by_termid":{"GO:0032131":null,"GO:0032132":null}}


id: MONDO:1012008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alloxan-diabetes, non-human animal","termid":"MONDO:1011712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alloxan-diabetes, dog","secondary_identifiers":["OMIA:000029-9615"],"termid":"MONDO:1012008","xrefs":{"Monarch":{"xref_id":"1012008"}}}


id: GO:0090161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Golgi ribbon formation","termid":"GO:0090161"}


id: GO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont haustorium mother cell formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of haustorium mother cell formation","termid":"GO:0075193"},{"relation_name":"positively_regulates","term_name":"haustorium mother cell formation","termid":"GO:0075192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of haustorium mother cell formation","synonyms":[{"name":"positive regulation of haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075194"}


id: MONDO:0012178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability with optic atrophy, facial dysmorphism, microcephaly, and short stature","secondary_identifiers":["MESH:C563810","UMLS:C1836915","OMIM:609037","MEDGEN:324635"],"synonyms":[{"name":"intellectual disability with optic atrophy, facial dysmorphism, microcephaly, and short stature","type":"exact"},{"name":"mental retardation with optic atrophy, facial dysmorphism, microcephaly, and short stature","type":"related"}],"termid":"MONDO:0012178","xrefs":{"Monarch":{"xref_id":"0012178"}}}


id: GO:0160212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when glycine is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["PMID:11823786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215","GO:0038023"],"is_obsolete":false,"name":"glycine-gated cation channel activity","termid":"GO:0160212"}


id: GO:0005468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete small-molecule carrier or transporter (obsolete GO:0005468)","synonyms":[{"name":"small-molecule carrier or transporter","type":"exact"}],"termid":"GO:0005468"}


id: MONDO:0100232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing psoriatic arthritis.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriatic arthritis, susceptibility to","secondary_identifiers":["OMIM:607507","UMLS:C1835223","MEDGEN:322604"],"synonyms":[{"name":"psoriatic arthritis, susceptibility","type":"exact"},{"name":"psoriatic arthritis, susceptibility to","type":"exact"}],"termid":"MONDO:0100232","xrefs":{"Monarch":{"xref_id":"0100232"}}}


id: MONDO:0018606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"extensive peripapillary myelinated nerve fibers","secondary_identifiers":["UMLS:C5681187","MEDGEN:1842279","Orphanet:440724","GARD:21842"],"termid":"MONDO:0018606","xrefs":{"Monarch":{"xref_id":"0018606"}}}


id: PBO:0067456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 581, pseudogene","termid":"PBO:0067456"}


id: GO:0090672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which telomerase RNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:nc","GOC:BHF_telomere","GOC:BHF","PMID:25467444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"telomerase RNA localization","termid":"GO:0090672"}


id: PBO:0077025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 7, pseudogene","termid":"PBO:0077025"}


id: PBO:0072736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A1","termid":"PBO:0072736"}


id: PBO:0038974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A3 receptor","termid":"PBO:0038974"}


id: PBO:0017664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug114","termid":"PBO:0017664"}


id: PBO:0072682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and FYVE domain containing 3","termid":"PBO:0072682"}


id: PBO:0042924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 2","termid":"PBO:0042924"}


id: GO:0031168
data:
  {"annotated_genes":["SJAG_00792","SJAG_04031","SJAG_00469","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105157,93872,93865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[93820],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ferrichrome. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ferrichrome metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ferrichrome metabolism","type":"exact"}],"termid":"GO:0031168","terms_by_termid":{"GO:0031169":null,"GO:1905569":null}}


id: MONDO:0033480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia 45","secondary_identifiers":["GARD:22353","OMIM:617769","Orphanet:589527","UMLS:C4540400","DOID:0080287","MEDGEN:1622156"],"synonyms":[{"name":"SCA45","type":"related"},{"name":"spinocerebellar ataxia 45","type":"exact"}],"termid":"MONDO:0033480","xrefs":{"Monarch":{"xref_id":"0033480"}}}


id: MONDO:0005074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant cystic serous or mucinous epithelial neoplasm characterized by the presence of malignant glandular epithelial cells forming papillary structures. Stromal invasion is present.","definition_xrefs":["NCIT:C3777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"papillary cystic neoplasm","termid":"MONDO:0006349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary cystadenocarcinoma","secondary_identifiers":["DOID:3110","EFO:0000639","MEDGEN:64635","ICDO:8450/3","MESH:D018283","UMLS:C0206700"],"synonyms":[{"name":"cystadenocarcinoma, papillary, malignant","type":"exact"},{"name":"papillary cystadenocarcinoma","type":"exact"},{"name":"papillary cystadenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"papillary cystadenocarcinoma, NOS (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0005074","xrefs":{"Monarch":{"xref_id":"0005074"}}}


id: PBO:0053699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 900","termid":"PBO:0053699"}


id: GO:0070199
data:
  {"annotated_genes":["SJAG_02761","SJAG_03540","SJAG_02336","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108019,103657,100145,118407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location on a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to chromosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to chromosome","type":"exact"}],"termid":"GO:0070199","terms_by_termid":{"GO:0140210":null}}


id: GO:0032788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving saturated monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-) and fully saturated C-C bonds.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"saturated monocarboxylic acid metabolic process","synonyms":[{"name":"saturated monocarboxylate metabolic process","type":"exact"},{"name":"saturated monocarboxylic acid metabolism","type":"exact"}],"termid":"GO:0032788"}


id: GO:0019608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["GOC:sm","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine catabolic process","secondary_identifiers":["MetaCyc:P181-PWY","UM-BBD_pathwayID:nic"],"synonyms":[{"name":"nicotine breakdown","type":"exact"},{"name":"nicotine catabolism","type":"exact"},{"name":"nicotine degradation","type":"exact"}],"termid":"GO:0019608"}


id: MONDO:1012782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive retinal atrophy that occurs in the Whippet breed of dog.","definition_xrefs":["OMIA:002085-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, Whippet, dog","synonyms":[{"name":"retinal atrophy, progressive, Whippet, dog","type":"exact"}],"termid":"MONDO:1012782","xrefs":{"Monarch":{"xref_id":"1012782"}}}


id: GO:0009766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. In the photosynthetic reaction centers, primary charge separation is initiated by the excitation of a molecule followed by the transfer of an electron to an electron acceptor molecule following energy transfer from light harvesting complexes.","definition_xrefs":["ISBN:0792361431"],"gene_count":0,"genotype_count":0,"name":"obsolete primary charge separation (obsolete GO:0009766)","termid":"GO:0009766"}


id: PBO:0017891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1242 family protein, likely secretory pathway component Ksh1 (predicted)","termid":"PBO:0017891"}


id: GO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of new blood vessels from existing vessels into avascular tissues, this process includes the specialization of endothelial cells into leading tip and stalk cells, proliferation and migration of the endothelial cells and cell adhesion resulting in angiogenic sprout fusion or lumen formation.","definition_xrefs":["PMID:23031691","PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sprouting angiogenesis","termid":"GO:0002040"}


id: PBO:0044489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 46 subfamily A member 1","termid":"PBO:0044489"}


id: PBO:0087434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit d of the V0 integral membrane domain of V-ATPase; part of the electrogenic proton pump found in the endomembrane system; required for V1 domain assembly on the vacuolar membrane; the V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase) has five subunits","termid":"PBO:0087434"}


id: GO:0097752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the stability of DNA.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of DNA stability","termid":"GO:0097752"}


id: PBO:0068021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 326","termid":"PBO:0068021"}


id: GO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure involved in coupling stereocilia to one another in sensory hair cells There are four morphologically distinct types: tip links, horizontal top connectors, shaft connectors and ankle links. Tip links and horizontal top connectors are the only inter-stereocilia links associated with mature cochlea, whereas ankle links appear during development of the auditory hair bundle.","definition_xrefs":["PMID:16775142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium bundle","termid":"GO:0032421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia coupling link","termid":"GO:0002139"}


id: GO:0002911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lymphocyte anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"lymphocyte anergy","termid":"GO:0002249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte anergy","termid":"GO:0002911"}


id: PR:Q9P7B3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sst1 gene.","definition_xrefs":["UniProtKB:Q9P7B3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation exchanger C521.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.04c","synonyms":[{"name":"Spom972h-sst1","type":"exact"}],"termid":"PR:Q9P7B3"}


id: PR:O42657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27D7.02c gene.","definition_xrefs":["UniProtKB:O42657","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain-containing protein C27D7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.02c","synonyms":[{"name":"Spom972h-SPAC27D7.02c","type":"exact"}],"termid":"PR:O42657"}


id: PBO:0055722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMNB1 divergent transcript","termid":"PBO:0055722"}


id: PBO:0075732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 divergent transcript","termid":"PBO:0075732"}


id: GO:0061414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of a nonfermentable carbon source leads to an increase of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["PMID:19686338","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"},{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source","termid":"GO:0061413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source","termid":"GO:0061414"}


id: MONDO:0005146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anxiety disorder precipitated by an experience of intense fear or horror while exposed to a traumatic (especially life-threatening) event. The disorder is characterized by intrusive recurring thoughts or images of the traumatic event; avoidance of anything associated with the event; a state of hyperarousal and diminished emotional responsiveness. These symptoms are present for at least one month and the disorder is usually long-term.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotic disorder","termid":"MONDO:0005379"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-traumatic stress disorder","secondary_identifiers":["NIFSTD:birnlex_12679","MESH:D013313","EFO:0001358","SCTID:47505003","DOID:2055","NCIT:C3389","ICD9:309.81","MEDGEN:21345","UMLS:C0038436"],"synonyms":[{"name":"PTSD","type":"exact"},{"name":"combat neurosis","type":"narrow"},{"name":"post-traumatic stress disorder","type":"exact"},{"name":"traumatic neurosis","type":"exact"}],"termid":"MONDO:0005146","xrefs":{"Monarch":{"xref_id":"0005146"}}}


id: PBO:0041573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 204","termid":"PBO:0041573"}


id: GO:0061419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hypoxia (obsolete GO:0061419)","termid":"GO:0061419"}


id: PBO:0036252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyl phosphate reductase Pro1","termid":"PBO:0036252"}


id: MONDO:0015031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extraneural perineurioma is a rare tumor of cranial and spinal nerves arising from peripheral nerve sheet and composed exclusively or predominantly of cells showing perineurial differentiation. It presents as a well-circumscribed, rarely encapsulated mass, not associated with a recognizable nerve, most commonly arising in the dermis and subcutis of the extremities or trunk, or, rarely, in deep soft tissue or skin (e.g., in the stomach, kidney, pancreas, maxillary sinus, mandible, bronchial tree and the face). The clinical presentation depends on the localization.","definition_xrefs":["Orphanet:100002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perineurioma","termid":"MONDO:0019404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extraneural perineurioma","secondary_identifiers":["UMLS:C4708595","GARD:19730","NCIT:C6912","MEDGEN:1643216","icd11.foundation:691853283","SCTID:768926005"],"synonyms":[{"name":"soft tissue perineurioma","type":"exact"}],"termid":"MONDO:0015031","xrefs":{"Monarch":{"xref_id":"0015031"}}}


id: PBO:0086942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RanGTP-binding protein; inhibits RanGAP1 (Rna1p)-mediated GTP hydrolysis of RanGTP (Gsp1p); shares similarity to proteins in other fungi but not in higher eukaryotes","termid":"PBO:0086942"}


id: PBO:0074500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP47 antisense RNA 1","termid":"PBO:0074500"}


id: GO:0008058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the ocellus.","direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule organization","termid":"GO:0048753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus pigment granule organization","synonyms":[{"name":"ocellus pigment granule organisation","type":"exact"},{"name":"ocellus pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0008058"}


id: GO:0072380
data:
  {"annotated_genes":["SJAG_01496","SJAG_03865"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79182,114835],"is_not":false,"summary":null,"term":"GO:0072380"}]},"cv_name":"cellular_component","definition":"A protein complex found in yeast that contains GET4, MDY2 (GET5), SGT2, and at least two heat shock proteins, HSP104 and YBR137W. The TRC complex transfers tail-anchored (TA) proteins to GET3 for targeting to the endoplasmic reticulum membrane.","definition_xrefs":["GOC:mah","PMID:23142665","PMID:20850366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER membrane insertion complex","termid":"GO:0072379"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01496":null,"SJAG_03865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"TRC complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GET4-GET5 transmembrane domain recognition complex","type":"related"},{"name":"TMD recognition complex","type":"exact"}],"termid":"GO:0072380","terms_by_termid":{"GO:0072380":null}}


id: PBO:0076329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptophysin like 2","termid":"PBO:0076329"}


id: PBO:0004268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic phosphate transporter (predicted)","termid":"PBO:0004268"}


id: PATO:0000725
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000725 function value (obsolete PATO:0000725)","termid":"PATO:0000725"}


id: PBO:0065594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 10","termid":"PBO:0065594"}


id: PBO:0059995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 15","termid":"PBO:0059995"}


id: GO:1901921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain that is involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex.","definition_xrefs":["GOC:TermGenie","PMID:10594013"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex (obsolete GO:1901921)","synonyms":[{"name":"CTD domain phosphorylation of RNA polymerase II involved in recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex","type":"exact"}],"termid":"GO:1901921"}


id: PBO:0012598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alditol NADP+ 1-oxidoreductase activity (predicted)","termid":"PBO:0012598"}


id: MONDO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An synovitis (disease) caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synovitis","termid":"MONDO:0002400"},{"relation_name":"is_a","term_name":"gonococcal infection of joint","termid":"MONDO:0041903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal synovitis","secondary_identifiers":["DOID:13454","SCTID:266138002","MEDGEN:546735","UMLS:C0275662","ICD9:098.51","icd11.foundation:491869700"],"synonyms":[{"name":"gonococcal synovitis &/or tenosynovitis","type":"exact"},{"name":"gonococcal synovitis and tenosynovitis","type":"exact"},{"name":"gonococcal synovitis or tenosynovitis","type":"exact"}],"termid":"MONDO:0001720","xrefs":{"Monarch":{"xref_id":"0001720"}}}


id: PBO:0063020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase","termid":"PBO:0063020"}


id: GO:0051684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the Golgi is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi localization","termid":"GO:0051645"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of Golgi location","synonyms":[{"name":"maintenance of Golgi apparatus localization","type":"exact"},{"name":"maintenance of Golgi body localization","type":"exact"},{"name":"maintenance of Golgi localization","type":"related"}],"termid":"GO:0051684"}


id: PR:Q6BDR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q6BDR8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.04c","synonyms":[{"name":"DNA repair protein rad62 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nse4","type":"exact"},{"name":"non-SMC element 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q6BDR8"}


id: PBO:0066888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 188","termid":"PBO:0066888"}


id: MONDO:0859319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 8","secondary_identifiers":["MEDGEN:1824030","UMLS:C5774257","OMIM:620133"],"termid":"MONDO:0859319","xrefs":{"Monarch":{"xref_id":"0859319"}}}


id: PBO:0036091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_translation_gene_mRNA_during_vegetative_growth","termid":"PBO:0036091"}


id: MONDO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inborn glycogen metabolism disorder (obsolete MONDO:0000422)","termid":"MONDO:0000422","xrefs":{"Monarch":{"xref_id":"0000422"}}}


id: MONDO:0021464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the caecum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign colon neoplasm","termid":"MONDO:0002278"},{"relation_name":"is_a","term_name":"cecal neoplasm","termid":"MONDO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of cecum","secondary_identifiers":["SCTID:92040001","MEDGEN:105420","UMLS:C0496859","ICD10CM:D12.0","NCIT:C4772"],"synonyms":[{"name":"benign cecum neoplasm","type":"exact"},{"name":"benign cecum tumor","type":"exact"},{"name":"benign cecum tumour","type":"exact"},{"name":"benign neoplasm of the cecum","type":"exact"},{"name":"benign tumor of cecum","type":"exact"},{"name":"benign tumor of the cecum","type":"exact"},{"name":"benign tumour of cecum","type":"exact"},{"name":"benign tumour of the cecum","type":"exact"},{"name":"caecum benign neoplasm","type":"exact"}],"termid":"MONDO:0021464","xrefs":{"Monarch":{"xref_id":"0021464"}}}


id: PBO:0087890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor that regulates hypoxic genes during normoxia; involved in the aerobic repression of genes such as COX5b, TIR1, and HEM13; binds DNA intrastrand cross-links formed by cisplatin; HMG (high mobility group box) domain containing protein which binds and bends cisplatin-modified DNA, blocking excision repair; IXR1 has a paralog, ABF2, that arose from the whole genome duplication","termid":"PBO:0087890"}


id: FYPO:0005352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the physical attachment of sister chromatids to mitotic spindle microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal attachment of mitotic spindle microtubules to kinetochore","synonyms":[{"name":"abnormal attachment of spindle microtubules to kinetochore mitosis","type":"exact"},{"name":"normal attachment of mitotic spindle microtubules to kinetochore during vegetative growth","type":"exact"},{"name":"normal attachment of spindle microtubules to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005352"}


id: PBO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complementing genes are not orthologous","termid":"PBO:0001003"}


id: FYPO:0001940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquinol-cytochrome-c reductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal ubiquinol-cytochrome-c reductase activity","termid":"FYPO:0001939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0002114","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased ubiquinol-cytochrome-c reductase activity","synonyms":[{"name":"reduced ubiquinol-cytochrome-c reductase activity","type":"exact"}],"termid":"FYPO:0001940"}


id: GO:0016917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gamma-aminobutyric acid (GABA), and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. (GABA, 4-aminobutyrate) is an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["GOC:signaling","GOC:jl","PMID:10637650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"GABA receptor activity","synonyms":[{"name":"4-aminobutanoate receptor activity","type":"exact"},{"name":"4-aminobutyrate receptor activity","type":"exact"},{"name":"GABA binding","type":"exact"},{"name":"gamma-aminobutyrate binding","type":"exact"},{"name":"gamma-aminobutyric acid binding","type":"exact"},{"name":"gamma-aminobutyric acid receptor activity","type":"exact"}],"termid":"GO:0016917"}


id: SO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding glutaminyl tRNA (SO:0000260).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic_acid_tRNA_primary_transcript","synonyms":[{"name":"glutamic acid tRNA primary transcript","type":"exact"}],"termid":"SO:0000216"}


id: GO:0045670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoclast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoclast differentiation","termid":"GO:0045670"}


id: GO:0019777
data:
  {"annotated_genes":["SJAG_01251"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061651"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ATG12 from one protein to another via the reaction X-ATG12 + Y = Y-ATG12 + X, where both X-ATG12 and Y-ATG12 are covalent linkages.","definition_xrefs":["PMID:12826404","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01251":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0019787","GO:0003674","GO:0016740","GO:0003824","GO:0140096","GO:0016746"],"is_obsolete":false,"name":"Atg12 transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5681999"],"synonyms":[{"name":"APG12 conjugating enzyme activity","type":"narrow"},{"name":"APG12 ligase activity","type":"narrow"},{"name":"Atg12 conjugating enzyme activity","type":"narrow"},{"name":"Atg12 ligase activity","type":"narrow"}],"termid":"GO:0019777","terms_by_termid":{"GO:0061651":null}}


id: GO:0006265
data:
  {"annotated_genes":["SJAG_03567","SJAG_05193","SJAG_02394","SJAG_04418","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59146,70219,72612,112922,118679],"is_not":false,"summary":null,"term":"GO:0006265"}]},"cv_name":"biological_process","definition":"The process in which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number.","definition_xrefs":["ISBN:071673706X","ISBN:0935702490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"DNA conformation change","termid":"GO:0071103"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02394":null,"SJAG_03567":null,"SJAG_04418":null,"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA topological change","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA underwinding","type":"narrow"}],"termid":"GO:0006265","terms_by_termid":{"GO:0006265":null}}


id: PBO:0042846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP53 pseudogene 1","termid":"PBO:0042846"}


id: MONDO:0009531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lip prints (obsolete MONDO:0009531)","secondary_identifiers":["OMIM:247150"],"synonyms":[{"name":"lip prints","type":"exact"}],"termid":"MONDO:0009531","xrefs":{"Monarch":{"xref_id":"0009531"}}}


id: GO:2000597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of optic nerve formation","termid":"GO:2000595"},{"relation_name":"positively_regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of optic nerve formation","synonyms":[{"name":"positive regulation of CN II biosynthesis","type":"related"},{"name":"positive regulation of CN II formation","type":"related"}],"termid":"GO:2000597"}


id: MOD:01371
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE bcecause identical and redundant with MOD:00851. Remap to MOD:00851.","definition_xrefs":["PubMed:8382902"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01371 deamidation in presence of O18 (obsolete MOD:01371)","synonyms":[{"name":"Deamidated:18O(1)","type":"related"},{"name":"Deamidation in presence of O18","type":"related"}],"termid":"MOD:01371"}


id: PBO:0076346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 13","termid":"PBO:0076346"}


id: GO:0045914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving catecholamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of catecholamine metabolic process","termid":"GO:0042069"},{"relation_name":"negatively_regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of catecholamine metabolic process","synonyms":[{"name":"down regulation of catecholamine metabolic process","type":"exact"},{"name":"down-regulation of catecholamine metabolic process","type":"exact"},{"name":"downregulation of catecholamine metabolic process","type":"exact"},{"name":"inhibition of catecholamine metabolic process","type":"narrow"},{"name":"negative regulation of catecholamine metabolism","type":"exact"}],"termid":"GO:0045914"}


id: GO:0045547
data:
  {"annotated_genes":["SJAG_00554","SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71752,74236],"is_not":false,"summary":null,"term":"GO:0045547"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + n isopentenyl diphosphate = a di-trans,poly-cis-polyprenyl diphosphate + n diphosphate.","definition_xrefs":["PMID:9858571","RHEA:53008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_02163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.5.1.87"],"synonyms":[{"name":"dehydrodolichyl diphosphate synthase activity","type":"exact"}],"termid":"GO:0045547","terms_by_termid":{"GO:0045547":null}}


id: MONDO:0014687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the HGSNAT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"HGSNAT-related retinopathy","termid":"MONDO:1040040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 73","secondary_identifiers":["ICD10CM:H35.5","MEDGEN:907690","OMIM:616544","UMLS:C4225287","DOID:0110389","GARD:16135"],"synonyms":[{"name":"HGSNAT retinitis pigmentosa","type":"exact"},{"name":"RP73","type":"exact"},{"name":"retinitis pigmentosa 73","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in HGSNAT","type":"exact"},{"name":"retinitis pigmentosa type 73","type":"exact"}],"termid":"MONDO:0014687","xrefs":{"Monarch":{"xref_id":"0014687"}}}


id: GO:1901386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated calcium channel activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of voltage-gated calcium channel activity","termid":"GO:1901385"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of voltage-gated calcium channel activity","synonyms":[{"name":"down regulation of depolarization-activated calcium channel","type":"broad"},{"name":"down regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"down regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"down regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"down regulation of voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"down regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"down regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"down regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"down-regulation of depolarization-activated calcium channel","type":"broad"},{"name":"down-regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"down-regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"down-regulation of voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"down-regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"downregulation of depolarization-activated calcium channel","type":"broad"},{"name":"downregulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"downregulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"downregulation of voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"downregulation of voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"downregulation of voltage-sensitive calcium channel","type":"exact"},{"name":"inhibition of depolarization-activated calcium channel","type":"broad"},{"name":"inhibition of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"inhibition of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"inhibition of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"inhibition of voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of voltage-dependent calcium channel activity","type":"exact"},{"name":"inhibition of voltage-gated calcium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated calcium ion channel activity","type":"exact"},{"name":"inhibition of voltage-sensitive calcium channel","type":"exact"},{"name":"negative regulation of depolarization-activated calcium channel","type":"broad"},{"name":"negative regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"negative regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"negative regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"negative regulation of voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"negative regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"negative regulation of voltage-sensitive calcium channel","type":"exact"}],"termid":"GO:1901386"}


id: GO:0046404
data:
  {"annotated_genes":["SJAG_01979","SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70556,87891],"is_not":false,"summary":null,"term":"GO:0046404"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5'-dephospho-DNA = ADP + 5'-phospho-DNA.","definition_xrefs":["RHEA:15669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051734"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01979":null,"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:POLYNUCLEOTIDE-5-HYDROXYL-KINASE-RXN","KEGG_REACTION:R03840"],"synonyms":[{"name":"ATP-dependent DNA kinase activity","type":"exact"},{"name":"polydeoxyribonucleotide 5'-hydroxyl-kinase activity","type":"broad"}],"termid":"GO:0046404","terms_by_termid":{"GO:0046404":null}}


id: SO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to delete a uridine.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000918 delete_U (obsolete SO:0000918)","synonyms":[{"name":"delete U","type":"exact"}],"termid":"SO:0000918"}


id: PBO:0110432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WTAP pseudogene 2","termid":"PBO:0110432"}


id: PBO:0057923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3648-2","termid":"PBO:0057923"}


id: PBO:0040173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 4","termid":"PBO:0040173"}


id: MONDO:0004047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the sphenoid sinus. Representative examples of benign neoplasms include Schneiderian papilloma and salivary gland-type adenoma. Representative examples of malignant neoplasms include carcinoma and lymphoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base neoplasm","termid":"MONDO:0002785"},{"relation_name":"is_a","term_name":"paranasal sinus neoplasm","termid":"MONDO:0005289"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoidal sinus neoplasm","secondary_identifiers":["DOID:6947","MEDGEN:87511","NCIT:C6792","SCTID:126679002","MONDO:0021216","UMLS:C0345676"],"synonyms":[{"name":"neoplasm of sphenoid sinus","type":"exact"},{"name":"neoplasm of sphenoidal sinus","type":"exact"},{"name":"neoplasm of the sphenoid sinus","type":"exact"},{"name":"neoplasm of the sphenoidal sinus","type":"exact"},{"name":"sphenoid sinus neoplasm","type":"exact"},{"name":"sphenoid sinus tumor","type":"exact"},{"name":"sphenoid sinus tumour","type":"exact"},{"name":"sphenoidal sinus neoplasm","type":"exact"},{"name":"sphenoidal sinus neoplasm (disease)","type":"exact"},{"name":"sphenoidal sinus tumor","type":"exact"},{"name":"sphenoidal sinus tumour","type":"exact"},{"name":"tumor of sphenoid sinus","type":"exact"},{"name":"tumor of sphenoidal sinus","type":"exact"},{"name":"tumor of the sphenoid sinus","type":"exact"},{"name":"tumor of the sphenoidal sinus","type":"exact"},{"name":"tumour of sphenoid sinus","type":"exact"},{"name":"tumour of sphenoidal sinus","type":"exact"},{"name":"tumour of the sphenoid sinus","type":"exact"},{"name":"tumour of the sphenoidal sinus","type":"exact"}],"termid":"MONDO:0004047","xrefs":{"Monarch":{"xref_id":"0004047"}}}


id: PBO:0053915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1210","termid":"PBO:0053915"}


id: FYPO:0002030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin cable. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["GO:0070648","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle organization","termid":"FYPO:0005979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin cable organization","synonyms":[{"name":"abnormal actin cable organisation during vegetative growth","type":"exact"},{"name":"abnormal actin cable organization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable organization during vegetative growth","type":"exact"},{"name":"abnormal formin-nucleated actin cable organization during vegetative growth","type":"exact"}],"termid":"FYPO:0002030"}


id: GO:0060969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of gene silencing, the transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene silencing (obsolete GO:0060969)","termid":"GO:0060969"}


id: PBO:0066016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAMP2 antisense RNA 1","termid":"PBO:0066016"}


id: PBO:0059943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 29","termid":"PBO:0059943"}


id: PBO:0046052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F","termid":"PBO:0046052"}


id: GO:0072167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules of the mesonephros acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"mesonephric tubule formation","termid":"GO:0072172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric tubule identity","termid":"GO:0072167"}


id: PBO:0058177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4472-1","termid":"PBO:0058177"}


id: GO:0007069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase I promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase I promoter during mitotic cell cycle (obsolete GO:0007069)","synonyms":[{"name":"down regulation of transcription from RNA polymerase I promoter during mitosis","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase I promoter during mitosis","type":"exact"},{"name":"downregulation of transcription from RNA polymerase I promoter during mitosis","type":"exact"},{"name":"inhibition of transcription from RNA polymerase I promoter during mitosis","type":"narrow"},{"name":"mitotic repression of transcription from Pol I promoter","type":"exact"},{"name":"negative regulation of transcription from Pol I promoter during mitosis","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase I promoter, mitotic","type":"exact"}],"termid":"GO:0007069"}


id: GO:0031578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A signaling process that monitors and signals errors in the placement or orientation of the spindle in the cell. This delays the completion of anaphase until errors are corrected.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:14616062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exit from mitosis","termid":"GO:0001100"},{"relation_name":"is_a","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044772","GO:0023052"],"is_obsolete":false,"name":"mitotic spindle orientation checkpoint signaling","secondary_identifiers":["GO:0072483"],"synonyms":[{"name":"SOC","type":"exact"},{"name":"SPOC","type":"exact"},{"name":"mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"mitotic spindle orientation checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cell cycle spindle orientation checkpoint","type":"exact"},{"name":"spindle position checkpoint","type":"exact"}],"termid":"GO:0031578"}


id: PBO:0077958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 13-2","termid":"PBO:0077958"}


id: PBO:0089892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sugar transporter family","termid":"PBO:0089892"}


id: PBO:0041470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 24","termid":"PBO:0041470"}


id: GO:1990648
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108055],"is_not":false,"summary":null,"term":"GO:1990648"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 4,5,6-trisphosphate + H2O = 1D-myo-inositol 4,6-bisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"inositol-4,5,6-triphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990648","terms_by_termid":{"GO:1990648":null}}


id: PBO:0048148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 7","termid":"PBO:0048148"}


id: PBO:0048574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin binding protein 1 (pseudogene)","termid":"PBO:0048574"}


id: GO:1902842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:kmv","PMID:24004945","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"negatively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of netrin-activated signaling pathway","synonyms":[{"name":"down regulation of netrin signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"down-regulation of netrin signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"downregulation of netrin signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"downregulation of netrin-activated signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signalling pathway","type":"exact"},{"name":"downregulation of netrin-mediated signaling pathway","type":"exact"},{"name":"inhibition of netrin signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signal transduction pathway","type":"narrow"},{"name":"inhibition of netrin-activated signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signalling pathway","type":"narrow"},{"name":"inhibition of netrin-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of netrin signaling pathway","type":"exact"},{"name":"negative regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"negative regulation of netrin-activated signalling pathway","type":"exact"},{"name":"negative regulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902842"}


id: MONDO:0004143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I meningioma characterized by the presence of psammoma bodies that predominate over the meningeal cells.","definition_xrefs":["NCIT:C4331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psammomatous meningioma","secondary_identifiers":["MEDGEN:90815","ICDO:9533/0","UMLS:C0334607","DOID:7210"],"synonyms":[{"name":"psammomatous meningioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004143","xrefs":{"Monarch":{"xref_id":"0004143"}}}


id: PBO:0045835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 25","termid":"PBO:0045835"}


id: PBO:0003054
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.3.1","termid":"PBO:0003054"}


id: PBO:0075041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-4","termid":"PBO:0075041"}


id: PBO:0044283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 6","termid":"PBO:0044283"}


id: GO:0098508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of hematopoietic stem cells from hemogenic endothelial cells by a process that includes tight-junction dissolution and loss of cell polarity followed by delamination from the endothelium.","definition_xrefs":["PMID:22521721","PMID:20154732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"endothelial to hematopoietic transition","termid":"GO:0098508"}


id: PBO:0075765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 4","termid":"PBO:0075765"}


id: PR:Q9HE01
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC589.03c gene.","definition_xrefs":["UniProtKB:Q9HE01","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C589.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.03c","synonyms":[{"name":"Spom972h-SPAC589.03c","type":"exact"}],"termid":"PR:Q9HE01"}


id: GO:0051274
data:
  {"annotated_genes":["SJAG_03123","SJAG_04509","SJAG_03705","SJAG_01290","SJAG_04659","SJAG_04073","SJAG_04668","SJAG_04666","SJAG_03587","SJAG_01288","SJAG_00876","SJAG_05285","SJAG_02590","SJAG_00218","SJAG_02222","SJAG_01835","SJAG_04771","SJAG_01787","SJAG_04462","SJAG_02446","SJAG_04483","SJAG_01453","SJAG_01255","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63285,74932,76602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[94223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[72795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[91359,112908,115562,72797,105864,75565,74275,70582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[77951,102394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[87281,92184],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[87658],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[90533,105106,117651,117776,92168,102597,105677],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"beta-glucan anabolism","type":"exact"},{"name":"beta-glucan biosynthesis","type":"exact"},{"name":"beta-glucan formation","type":"exact"},{"name":"beta-glucan synthesis","type":"exact"}],"termid":"GO:0051274","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PR:Q9UR09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psu1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR09"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase PSU1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.13c","synonyms":[{"name":"Spom972h-psu1","type":"exact"},{"name":"cell wall synthesis protein psu1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR09"}


id: GO:0060674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a blood vessel of the placenta over time, from its formation to the mature structure.","definition_xrefs":["PMID:16916377","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"},{"relation_name":"part_of","term_name":"placenta development","termid":"GO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"placenta blood vessel development","termid":"GO:0060674"}


id: GO:0061308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the development of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell development","termid":"GO:0014032"},{"relation_name":"part_of","term_name":"cardiac neural crest cell differentiation involved in heart development","termid":"GO:0061307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell development involved in heart development","termid":"GO:0061308"}


id: GO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Outer arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes. Outer dynein arms contain 2-3 heavy chains, two or more intermediate chains and a cluster of 4-8 light chains. Inner and outer dynein arms have different functions in the generation of microtubule-based motility.","definition_xrefs":["PMID:6218174","GOC:BHF","GOC:vk","PMID:2557057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex","termid":"GO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"outer dynein arm","synonyms":[{"name":"outer dynein arm complex","type":"exact"}],"termid":"GO:0036157"}


id: PBO:0079855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B4 (pseudogene)","termid":"PBO:0079855"}


id: GO:0006256
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76058],"is_not":false,"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP, uridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"UDP metabolic process","termid":"GO:0046048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"UDP catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"UDP breakdown","type":"exact"},{"name":"UDP catabolism","type":"exact"},{"name":"UDP degradation","type":"exact"}],"termid":"GO:0006256","terms_by_termid":{"GO:0006256":null}}


id: MONDO:0008342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubic bone dysplasia","secondary_identifiers":["MEDGEN:356777","UMLS:C1867436","MESH:C566735","OMIM:178350"],"synonyms":[{"name":"pubic bone dysplasia","type":"exact"}],"termid":"MONDO:0008342","xrefs":{"Monarch":{"xref_id":"0008342"}}}


id: GO:0021662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 4. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:dgh","GO_REF:0000021","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 structural organization","synonyms":[{"name":"rhombomere 4 structural organisation","type":"exact"}],"termid":"GO:0021662"}


id: PBO:0036046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_multiseptate_cell","termid":"PBO:0036046"}


id: PBO:0068639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 20, pseudogene","termid":"PBO:0068639"}


id: PR:Q9UTE4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sno1 gene.","definition_xrefs":["UniProtKB:Q9UTE4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized glutaminase C222.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.08c","synonyms":[{"name":"Spom972h-sno1","type":"exact"}],"termid":"PR:Q9UTE4"}


id: PBO:0039816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 6","termid":"PBO:0039816"}


id: MONDO:0859749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphomatoid granulomatosis that is characterized by the presence of aggregates of neoplastic large B-lymphocytes, usually admixed with pleomorphic and Hodgkin-like cells, in a background of chronic inflammation. Necrotic changes are present and are usually extensive.","definition_xrefs":["DOID:0081310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphomatoid granulomatosis","termid":"MONDO:0019466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"grade III lymphomatoid granulomatosis","secondary_identifiers":["MEDGEN:78928","NCIT:C7933","UMLS:C0279067"],"termid":"MONDO:0859749","xrefs":{"Monarch":{"xref_id":"0859749"}}}


id: GO:0018963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phthalate, the anion of phthalic acid. Phthalic acid diesters are used industrially in the production of a variety of household and consumer goods including plastic polymers, lubricating oils, and carriers for perfumes in cosmetics, while phthalic acid itself is used industrially as a plasticizer. Terephthalate is used in the synthesis of polyethylene terephthalate (polyethene terephthlate, abbreviated PET or PETE), a plastic polymer with many commercial uses.","definition_xrefs":["UM-BBD_pathwayID:pth"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phthalate metabolic process","synonyms":[{"name":"phthalate metabolism","type":"exact"},{"name":"phthalic acid metabolic process","type":"exact"},{"name":"phthalic acid metabolism","type":"exact"}],"termid":"GO:0018963"}


id: PBO:0074292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20 like kinase","termid":"PBO:0074292"}


id: _global:genome_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genome_of","termid":"_global:genome_of"}


id: PBO:0004826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Lea1 (predicted)","termid":"PBO:0004826"}


id: FYPO:0002237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cerulenin. Cells stop growing (and may die) at a concentration of cerulenin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to cerulenin","synonyms":[{"name":"hypersensitive to cerulenin","type":"exact"},{"name":"sensitive to cerulenin during mitotic cell cycle","type":"related"},{"name":"sensitive to cerulenin during vegetative growth","type":"exact"}],"termid":"FYPO:0002237"}


id: MOD:00965
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal L-cysteine residue by a formadehyde adduct to 4-thiazolidinecarboxylic acid.","definition_xrefs":["DeltaMass:342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"4-thiazolidinecarboxylic acid","synonyms":[{"name":"thioproline","type":"exact"}],"termid":"MOD:00965"}


id: PBO:0080108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP25 small subunit processome component","termid":"PBO:0080108"}


id: GO:0051371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc.","definition_xrefs":["PMID:15014165","PMID:11699871","PMID:10984498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-actinin binding","termid":"GO:0051393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0008092","GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"muscle alpha-actinin binding","synonyms":[{"name":"alpha-actinin 2 binding","type":"narrow"},{"name":"alpha-actinin 3 binding","type":"narrow"}],"termid":"GO:0051371"}


id: GO:0021945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that increases the extent of granule cell motility using intracellular calcium signaling mechanisms during radial migration.","definition_xrefs":["GOC:tb","PMID:15157725","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cerebellar granule cell migration by calcium (obsolete GO:0021945)","synonyms":[{"name":"calcium-mediated activation of granule cell migration","type":"narrow"},{"name":"calcium-mediated positive regulation of granule cell migration","type":"exact"},{"name":"calcium-mediated stimulation of granule cell migration","type":"narrow"},{"name":"calcium-mediated up regulation of granule cell migration","type":"exact"},{"name":"calcium-mediated up-regulation of granule cell migration","type":"exact"},{"name":"calcium-mediated upregulation of granule cell migration","type":"exact"}],"termid":"GO:0021945"}


id: GO:1900325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltotriulose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of maltotriulose transport","termid":"GO:1900324"},{"relation_name":"negatively_regulates","term_name":"maltotriulose transport","termid":"GO:2001090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maltotriulose transport","synonyms":[{"name":"down regulation of maltotriulose transport","type":"exact"},{"name":"down-regulation of maltotriulose transport","type":"exact"},{"name":"downregulation of maltotriulose transport","type":"exact"},{"name":"inhibition of maltotriulose transport","type":"narrow"}],"termid":"GO:1900325"}


id: PBO:0058978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutL homolog 3","termid":"PBO:0058978"}


id: PATO:0001104
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001104 strain value (obsolete PATO:0001104)","termid":"PATO:0001104"}


id: GO:0020036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A disk-like structure that appears at the periphery of a red blood cell infected by an apicomplexan parasite, characterized by a translucent lumen and an electron-dense coat of variable thickness; often appears to be tethered to the host cell membrane by fibrous connections with the erythrocyte cytoskeleton.","definition_xrefs":["PMID:16705161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Maurer's cleft","synonyms":[{"name":"Maurers cleft","type":"exact"}],"termid":"GO:0020036"}


id: PBO:0073093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C pseudogene 2","termid":"PBO:0073093"}


id: PBO:0046309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease G","termid":"PBO:0046309"}


id: PBO:0076763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase 2","termid":"PBO:0076763"}


id: PBO:0051450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-37","termid":"PBO:0051450"}


id: GO:0006047
data:
  {"annotated_genes":["SJAG_03723","SJAG_04728","SJAG_01443","SJAG_00519","SJAG_00978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58320,71763,76362,67087,70592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00978":null,"SJAG_01443":null,"SJAG_03723":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"UDP-N-acetylglucosamine metabolism","type":"exact"}],"termid":"GO:0006047","terms_by_termid":{"GO:0006048":null}}


id: GO:1990722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A serine/threonine protein kinase complex involved in cell survival, apoptosis and autophagic cell death pathways. DAPK1 is activated by the dephosphorylation of a n-terminal serine and calcium-calmodulin binding.","definition_xrefs":["GOC:bhm","PMID:20103772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DAPK1-calmodulin complex","synonyms":[{"name":"death-associated protein kinase 1 - calmodulin complex","type":"exact"}],"termid":"GO:1990722"}


id: GO:1990979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of copper ions passing through the blood-brain barrier.","definition_xrefs":["PMID:24614235"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion transport across blood-brain barrier (obsolete GO:1990979)","synonyms":[{"name":"copper ion transport across BBB","type":"related"}],"termid":"GO:1990979"}


id: MONDO:0958127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis obliterans syndrome","termid":"MONDO:0015265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transplant-related bronchiolitis obliterans","secondary_identifiers":["MEDGEN:1808244","Orphanet:658602","UMLS:C5574736"],"termid":"MONDO:0958127","xrefs":{"Monarch":{"xref_id":"0958127"}}}


id: PBO:0011443
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kelley-Seegmiller syndrome","termid":"PBO:0011443"}


id: PBO:0053927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1226","termid":"PBO:0053927"}


id: GO:0052225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near a second organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near other organism involved in symbiotic interaction (obsolete GO:0052225)","synonyms":[{"name":"energy taxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052225"}


id: GO:0046745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a capsid acquires another membrane envelope, subsequent to acquiring an initial membrane envelope.","definition_xrefs":["ISBN:0781718325","PMID:11533156","ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral capsid secondary envelopment","secondary_identifiers":["GO:0046746","GO:0046748","GO:0046747","GO:0046770","GO:0046768","GO:0046769"],"synonyms":[{"name":"ER membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"Golgi membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"endoplasmic reticulum membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"inner nuclear membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"nuclear membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"outer nuclear membrane viral budding during viral capsid re-envelopment","type":"exact"},{"name":"plasma membrane viral budding during viral capsid re-envelopment","type":"related"},{"name":"viral budding from ER membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from ER membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from Golgi membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from Golgi membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from inner nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"viral budding from outer nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from outer nuclear membrane during viral capsid re-envelopment","type":"exact"},{"name":"viral budding from plasma membrane by viral capsid re-envelopment","type":"exact"},{"name":"viral budding from plasma membrane during viral capsid re-envelopment","type":"related"},{"name":"viral capsid re-envelopment","type":"related"},{"name":"virus budding from ER membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from ER membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from Golgi membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from Golgi membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from inner nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from inner nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from outer nuclear membrane by viral capsid re-envelopment","type":"exact"},{"name":"virus budding from outer nuclear membrane during viral capsid re-envelopment","type":"related"},{"name":"virus budding from plasma membrane during viral capsid re-envelopment","type":"related"}],"termid":"GO:0046745"}


