# terms

id: MONDO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rheumatic heart disease (obsolete MONDO:0000472)","termid":"MONDO:0000472","xrefs":{"Monarch":{"xref_id":"0000472"}}}


id: PBO:0059145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPL proto-oncogene, thrombopoietin receptor","termid":"PBO:0059145"}


id: PBO:0059506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome c oxidase II","termid":"PBO:0059506"}


id: PBO:0026723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcript_length","termid":"PBO:0026723"}


id: PBO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_3'-5'-exoribonuclease_activity","termid":"PBO:0030177"}


id: PBO:0073463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein D","termid":"PBO:0073463"}


id: GO:0052109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host cell wall callose deposition (obsolete GO:0052109)","synonyms":[{"name":"activation by symbiont of defense-related host cell wall callose deposition","type":"exact"},{"name":"positive regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host callose deposition","type":"related"},{"name":"positive regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"stimulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"up regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"up-regulation by symbiont of defense-related host cell wall callose deposition","type":"related"},{"name":"upregulation by symbiont of defense-related host cell wall callose deposition","type":"related"}],"termid":"GO:0052109"}


id: PBO:0075992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP family member 1B","termid":"PBO:0075992"}


id: MONDO:0011242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bartter syndrome in which the cause of the disease is a mutation in the BSND gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome type 4","termid":"MONDO:0019524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter disease type 4A","secondary_identifiers":["DOID:0110145","SCTID:717791000","MEDGEN:355430","GARD:15348","OMIM:602522","UMLS:C1865270"],"synonyms":[{"name":"BARTS4A","type":"exact"},{"name":"BSND","type":"exact"},{"name":"BSND Bartter syndrome","type":"exact"},{"name":"Bartter disease type 4a","type":"exact"},{"name":"Bartter syndrome caused by mutation in BSND","type":"exact"},{"name":"Bartter syndrome type 4a","type":"exact"},{"name":"Bartter syndrome, infantile, with sensorineural deafness","type":"related"},{"name":"Bartter syndrome, neonatal, with sensorineural deafness","type":"related"},{"name":"Bartter syndrome, type 4A","type":"related"},{"name":"Bartter syndrome, type 4A, neonatal, with sensorineural deafness","type":"related"},{"name":"neonatal Bartter syndrome with sensorineural deafness","type":"exact"},{"name":"sensorineural deafness with mild renal dysfunction","type":"related"}],"termid":"MONDO:0011242","xrefs":{"Monarch":{"xref_id":"0011242"}}}


id: PR:Q9HGL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Ts, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11741:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Ts, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.07c","secondary_identifiers":["UniProtKB:Q9HGL5"],"synonyms":[{"name":"EF-Ts (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"EF-TsMt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC800.07c","type":"related"},{"name":"Spom972h-TSFM","type":"exact"}],"termid":"PR:Q9HGL5"}


id: GO:0030532
data:
  {"annotated_genes":["SJAG_04911","SJAG_00058","SJAG_05235","SJAG_04538","SJAG_02304","SJAG_01634","SJAG_01819","SJAG_04079","SJAG_03469","SJAG_01870","SJAG_00322","SJAG_01327","SJAG_03547","SJAG_00147","SJAG_00577","SJAG_04214","SJAG_03460","SJAG_04529","SJAG_00504","SJAG_01452","SJAG_05009","SJAG_00539","SJAG_01008","SJAG_03369","SJAG_03954","SJAG_04318","SJAG_04433","SJAG_00531","SJAG_01654","SJAG_00313","SJAG_00414","SJAG_02279","SJAG_00643","SJAG_04405","SJAG_04163","SJAG_03210","SJAG_01301","SJAG_01308","SJAG_00498","SJAG_03245","SJAG_04230","SJAG_01547","SJAG_01015","SJAG_00474","SJAG_05240","SJAG_00989","SJAG_02469","SJAG_02455","SJAG_02843","SJAG_03995","SJAG_03070","SJAG_00278","SJAG_03410","SJAG_03214","SJAG_01440","SJAG_04222","SJAG_03983","SJAG_02295","SJAG_05208","SJAG_04497","SJAG_02185"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76595,113020,72913,75419,79323,73853,69839,73808,112112,72502,79147,70233,102461,106699,76488,76792,93762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005685"},{"annotations":[107639,73668,75567,114677,71934,70149,106101,79148,109816,112627,70234,109252,115609,77158,75191,76489,116143,108289,75420,77476,112400,73749,73026,72503,80070,75765,76793,95578,102164,102956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005686"},{"annotations":[70235,72504,76490,76794,79149,74859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005687"},{"annotations":[79012,109817,94938,105638,116145,79809,78567,110887,74021,77225,97766,100388,70236,61883,76073,72506,78104,108290,77249,77146,77112,105596,63155,92880,110376,70450,71284,114603,78267,75422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046540"},{"annotations":[95580,75418,108291,72248,116146,100389,112629,109818,117571,78266,70232,106304,114679,79146,106103,102457,76791,75948,72501,76487,97157,77111,115611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005682"},{"annotations":[78566,77224,105251,79807,70449,78675,71494,61882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005688"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains at least one RNA of the small nuclear RNA (snRNA) class and as well as its associated proteins. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP, U4/U6 snRNP, or 7SK snRNP. Many, of these complexes become part of the spliceosome involved in splicing of nuclear mRNAs. Others are involved in regulation of transcription elongation or 3'-end processing of replication-dependent histone pre-mRNAs.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00278":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00531":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01440":null,"SJAG_01452":null,"SJAG_01547":null,"SJAG_01634":null,"SJAG_01654":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03214":null,"SJAG_03245":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04079":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05208":null,"SJAG_05235":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"small nuclear ribonucleoprotein complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:SnRNP"],"synonyms":[{"name":"small nuclear ribonucleoprotein","type":"exact"},{"name":"snRNP","type":"exact"}],"termid":"GO:0030532","terms_by_termid":{"GO:0005682":null,"GO:0005685":null,"GO:0005686":null,"GO:0005687":null,"GO:0005688":null,"GO:0046540":null}}


id: MONDO:0001186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by persistent or recurrent episodes of feeling detached from one's self (either one's body or one's mental processes), although the sufferer remains aware that this is only a feeling and does not represent reality.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dissociative disorder","termid":"MONDO:0001160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depersonalization disorder","secondary_identifiers":["DOID:11038","MEDGEN:151919","NCIT:C94331","ICD9:300.6","UMLS:C0683416","SCTID:70764005"],"synonyms":[{"name":"neurotic derealization","type":"exact"}],"termid":"MONDO:0001186","xrefs":{"Monarch":{"xref_id":"0001186"}}}


id: GO:0055021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle growth.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart growth","termid":"GO:0060420"},{"relation_name":"regulates","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle tissue growth","termid":"GO:0055021"}


id: PBO:0082700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Mcm2-7 hexameric helicase complex; MCM complex is important for priming origins of DNA replication in G1 and becomes an active ATP-dependent helicase that promotes DNA melting and elongation when activated by Cdc7p-Dbf4p in S-phase","termid":"PBO:0082700"}


id: PBO:0083676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein involved in turnover of plasma membrane proteins; member of the DUP380 subfamily of conserved, often subtelomeric COS genes; required for the multivesicular vesicle body sorting pathway that internalizes plasma membrane proteins for degradation; Cos proteins provide ubiquitin in trans for nonubiquitinated cargo proteins","termid":"PBO:0083676"}


id: GO:0032373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"positively_regulates","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sterol transport","synonyms":[{"name":"activation of sterol transport","type":"narrow"},{"name":"stimulation of sterol transport","type":"narrow"},{"name":"up regulation of sterol transport","type":"exact"},{"name":"up-regulation of sterol transport","type":"exact"},{"name":"upregulation of sterol transport","type":"exact"}],"termid":"GO:0032373"}


id: MOD:01331
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 6x(13)C labeled L-arginine.","definition_xrefs":["PubMed:12716131","Unimod:188#R","OMSSA:136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-arginine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"},{"name":"arg-13c6","type":"exact"}],"termid":"MOD:01331"}


id: GO:1901821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-zeacarotene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:6060456","UniPathway:UPA00804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"alpha-zeacarotene metabolic process","termid":"GO:1901819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-zeacarotene biosynthetic process","synonyms":[{"name":"alpha-zeacarotene anabolism","type":"exact"},{"name":"alpha-zeacarotene biosynthesis","type":"exact"},{"name":"alpha-zeacarotene formation","type":"exact"},{"name":"alpha-zeacarotene synthesis","type":"exact"}],"termid":"GO:1901821"}


id: PBO:0067374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 475, pseudogene","termid":"PBO:0067374"}


id: GO:0052740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-acyl-2-lysophosphatidylserine + H2O = sn-glycerol-phosphoserine + a carboxylate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-acyl-2-lysophosphatidylserine acylhydrolase activity (obsolete GO:0052740)","termid":"GO:0052740"}


id: PBO:0087988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; introduces pseudouridines at positions 26-28, 34-36, 65, and 67 of tRNA; also acts on U2 snRNA; also pseudouridylates some mRNAs, and pseudouridylation level varies with growth phase; nuclear protein that appears to be involved in tRNA export; PUS1 has a paralog, PUS2, that arose from the whole genome duplication","termid":"PBO:0087988"}


id: MONDO:0032761
data:
  {"annotated_genes":["SJAG_04554"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86915],"is_not":false,"summary":null,"term":"MONDO:0032761"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04554":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 114","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22662","DOID:0111642","MEDGEN:1684024","UMLS:C5193107","OMIM:618456"],"synonyms":[{"name":"DFNB114","type":"narrow"},{"name":"deafness, autosomal recessive 114","type":"narrow"}],"termid":"MONDO:0032761","terms_by_termid":{"MONDO:0032761":null},"xrefs":{"Monarch":{"xref_id":"0032761"}}}


id: GO:0014028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the notochord from the chordamesoderm. The notochord is composed of large cells packed within a firm connective tissue sheath and is found in all chordates at the ventral surface of the neural tube. In vertebrates, the notochord contributes to the vertebral column.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"},{"relation_name":"part_of","term_name":"notochord morphogenesis","termid":"GO:0048570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord formation","termid":"GO:0014028"}


id: GO:0018547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of one or more nitrite (NO2-) groups from nitroglycerin or a derivative.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nitroglycerin reductase activity (obsolete GO:0018547)","secondary_identifiers":["Reactome:R-HSA-9620103"],"synonyms":[{"name":"NG reductase activity","type":"exact"}],"termid":"GO:0018547"}


id: PBO:0070605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 73","termid":"PBO:0070605"}


id: PBO:0085283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane signal receptor for peroxisomal matrix proteins; receptor for the C-terminal tripeptide signal sequence (PTS1) of peroxisomal matrix proteins; required for peroxisomal matrix protein import; also proposed to have PTS1-receptor independent functions","termid":"PBO:0085283"}


id: _global:molecular_interaction_relation_helper_property
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"interaction_relation_helper_property","termid":"_global:interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecular_interaction_relation_helper_property","secondary_identifiers":["RO:0002564"],"termid":"_global:molecular_interaction_relation_helper_property"}


id: MONDO:0030714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta, IIA 22","secondary_identifiers":["UMLS:C5676943","OMIM:619795","MEDGEN:1801631"],"synonyms":[{"name":"OI22","type":"exact"},{"name":"osteogenesis imperfecta, IIA 22","type":"exact"}],"termid":"MONDO:0030714","xrefs":{"Monarch":{"xref_id":"0030714"}}}


id: PBO:0029415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_palmitoylation_during_meiosis","termid":"PBO:0029415"}


id: GO:0033661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of reactive oxygen species produced by the host as part of its innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont defense to host-produced reactive oxygen species","termid":"GO:0052164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated defense to host-produced reactive oxygen species","synonyms":[{"name":"down regulation by organism of defense-related host metabolic burst","type":"exact"},{"name":"down-regulation by organism of defense-related host oxidative burst","type":"exact"},{"name":"downregulation by organism of defense-related host AOS production","type":"exact"},{"name":"negative regulation by organism of defense-related host ROI production","type":"exact"},{"name":"negative regulation by organism of defense-related host ROS production","type":"exact"},{"name":"negative regulation by organism of defense-related host reactive oxidative species production","type":"exact"},{"name":"negative regulation by organism of defense-related host reactive oxygen intermediate production","type":"exact"},{"name":"negative regulation by organism of defense-related host respiratory burst","type":"exact"},{"name":"negative regulation by symbiont of defense-related host reactive oxygen species production","type":"exact"},{"name":"suppression by symbiont of defense-related host reactive oxygen species production","type":"related"}],"termid":"GO:0033661"}


id: GO:0007429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Sprouting of secondary branches in an open tracheal system. These form from the tips of primary branches and are formed by individual cells that roll up into unicellular tubes. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:29844090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in open tracheal system development","termid":"GO:0060446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary branching, open tracheal system","synonyms":[{"name":"secondary tracheal branching","type":"exact"}],"termid":"GO:0007429"}


id: GO:0019710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-asparagine to form peptidyl-N4-methyl-L-asparagine or peptidyl-N4,N4-dimethyl-L-asparagine.","definition_xrefs":["RESID:AA0070","RESID:AA0311"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine methylation (obsolete GO:0019710)","termid":"GO:0019710"}


id: PBO:0059624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDM2 binding protein","termid":"PBO:0059624"}


id: GO:0070726
data:
  {"annotated_genes":["SJAG_01321","SJAG_00974","SJAG_03013","SJAG_04868"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87972,88464,91533,90010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, and most prokaryotic cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"part_of","term_name":"cell wall biogenesis","termid":"GO:0042546"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070726","terms_by_termid":{"GO:0030476":null}}


id: PBO:0087674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the membrane-associated retromer complex; endosomal protein; essential for endosome-to-Golgi retrograde transport; forms a subcomplex with Vps35p and Vps26p that selects cargo proteins for endosome-to-Golgi retrieval","termid":"PBO:0087674"}


id: PR:O42926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 13b (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.02c","synonyms":[{"name":"Spom972h-vps1302","type":"exact"}],"termid":"PR:O42926"}


id: GO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0815316208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"plant-type vacuole","synonyms":[{"name":"vacuole, cell cycle-independent morphology","type":"exact"}],"termid":"GO:0000325"}


id: GO:0071759
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgX isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgX immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgX immunoglobulin complex","termid":"GO:0071759"}


id: PBO:0031365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_5-azacytidine","termid":"PBO:0031365"}


id: MONDO:0022948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi renotubular syndrome","termid":"MONDO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Deal Barratt Dillon syndrome","secondary_identifiers":["MESH:C538206","MEDGEN:444139","UMLS:C2931773","GARD:1717"],"synonyms":[{"name":"Fanconi syndrome, ichthyosis, dysmorphism, jaundice and diarrhea","type":"related"},{"name":"Fanconi syndrome, ichthyosis, dysmorphism, jaundice and diarrhoea","type":"related"}],"termid":"MONDO:0022948","xrefs":{"Monarch":{"xref_id":"0022948"}}}


id: PBO:0071877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 15","termid":"PBO:0071877"}


id: FYPO:0001657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of serine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal serine import","synonyms":[{"name":"abnormal L-serine import","type":"exact"},{"name":"abnormal L-serine import across plasma membrane","type":"exact"},{"name":"abnormal serine import during mitotic cell cycle","type":"related"},{"name":"abnormal serine import during vegetative growth","type":"exact"},{"name":"abnormal serine import into cell","type":"exact"},{"name":"abnormal serine uptake","type":"exact"}],"termid":"FYPO:0001657"}


id: PBO:0038719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 14","termid":"PBO:0038719"}


id: PBO:0091198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met","termid":"PBO:0091198"}


id: MONDO:0005101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease involving the mucosal surface of the large intestine and rectum. It may present with an acute or slow onset and follows an intermittent or continuous course. Signs and symptoms include abdominal pain, diarrhea, fever, weight loss, and intestinal hemorrhage.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"ulcerative colitis","secondary_identifiers":["MEDGEN:3532","DOID:8577","EFO:0000729","Orphanet:771","MESH:D003093","NANDO:2200920","ICD9:556","HP:0100279","UMLS:C0009324","ICD9:556.5","ICD9:556.9","NCIT:C2952","SCTID:64766004","ICD9:556.8","icd11.foundation:784669405","NANDO:1200449"],"synonyms":[{"name":"colitis ulcerative","type":"exact"},{"name":"left-sided ulcerative colitis","type":"narrow"},{"name":"ulcerative colitis","type":"exact"},{"name":"ulcerative colitis (disease)","type":"exact"},{"name":"ulcerative proctosigmoiditis","type":"related"}],"termid":"MONDO:0005101","xrefs":{"Monarch":{"xref_id":"0005101"}}}


id: PBO:0081143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP57 zinc finger protein","termid":"PBO:0081143"}


id: PBO:0031572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vegetative_cell_lysis","termid":"PBO:0031572"}


id: GO:0032002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-28 and interleukin-29. It is composed of an alpha and a beta receptor subunit (in human IFNLR1/IL28Ralpha & IL10RB) and either Interleukin-28 (IFNL2 or IFNL3) or Interleukin-29 (IFNL1).","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"interleukin-28 receptor complex","synonyms":[{"name":"IL-28 receptor complex","type":"exact"}],"termid":"GO:0032002"}


id: PBO:0081175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 21","termid":"PBO:0081175"}


id: PBO:0083586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YAR060C has a paralog, YHR212C, that arose from a segmental duplication","termid":"PBO:0083586"}


id: PBO:0056150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MET transcriptional regulator MACC1","termid":"PBO:0056150"}


id: PBO:0029350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_tRNA_level_during_vegetative_growth","termid":"PBO:0029350"}


id: PBO:0055139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2558","termid":"PBO:0055139"}


id: PBO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein Mug20","termid":"PBO:0001854"}


id: MONDO:0850514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia","termid":"MONDO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005336","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"inclusion body myopathy and brain white matter abnormalities","secondary_identifiers":["MEDGEN:1812978","OMIM:619733","UMLS:C5676909","DOID:0081121"],"termid":"MONDO:0850514","xrefs":{"Monarch":{"xref_id":"0850514"}}}


id: GO:1990214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of protein levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16840699","PMID:22233353"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host protein levels (obsolete GO:1990214)","termid":"GO:1990214"}


id: GO:1900628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of arugosin biosynthetic process","termid":"GO:1900626"},{"relation_name":"positively_regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of arugosin biosynthetic process","synonyms":[{"name":"activation of arugosin anabolism","type":"exact"},{"name":"activation of arugosin biosynthesis","type":"exact"},{"name":"activation of arugosin biosynthetic process","type":"narrow"},{"name":"activation of arugosin formation","type":"exact"},{"name":"activation of arugosin synthesis","type":"exact"},{"name":"positive regulation of arugosin anabolism","type":"exact"},{"name":"positive regulation of arugosin biosynthesis","type":"exact"},{"name":"positive regulation of arugosin formation","type":"exact"},{"name":"positive regulation of arugosin synthesis","type":"exact"},{"name":"up regulation of arugosin anabolism","type":"exact"},{"name":"up regulation of arugosin biosynthesis","type":"exact"},{"name":"up regulation of arugosin biosynthetic process","type":"exact"},{"name":"up regulation of arugosin formation","type":"exact"},{"name":"up regulation of arugosin synthesis","type":"exact"},{"name":"up-regulation of arugosin anabolism","type":"exact"},{"name":"up-regulation of arugosin biosynthesis","type":"exact"},{"name":"up-regulation of arugosin biosynthetic process","type":"exact"},{"name":"up-regulation of arugosin formation","type":"exact"},{"name":"up-regulation of arugosin synthesis","type":"exact"},{"name":"upregulation of arugosin anabolism","type":"exact"},{"name":"upregulation of arugosin biosynthesis","type":"exact"},{"name":"upregulation of arugosin biosynthetic process","type":"exact"},{"name":"upregulation of arugosin formation","type":"exact"},{"name":"upregulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900628"}


id: GO:0170023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific soluble sweet compound has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:24474785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic taste receptor activity","termid":"GO:0170021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215","GO:0038023"],"is_obsolete":false,"name":"ionotropic sweet taste receptor activity","termid":"GO:0170023"}


id: GO:0016409
data:
  {"annotated_genes":["SJAG_02305","SJAG_01112","SJAG_00895","SJAG_04178","SJAG_04451","SJAG_01299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67766,74737,70870,72648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019706"},{"annotations":[76655,78688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_02305":null,"SJAG_04178":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5686304"],"termid":"GO:0016409","terms_by_termid":{"GO:0004758":null,"GO:0019706":null}}


id: GO:1904235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["PMID:25834989","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904235"}


id: GO:1901146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in mesonephric nephron morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}


id: PBO:0070669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 40","termid":"PBO:0070669"}


id: PBO:0062474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily G member 2","termid":"PBO:0062474"}


id: GO:1901630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of presynaptic membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of presynaptic membrane organization","termid":"GO:1901629"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"presynaptic membrane organization","termid":"GO:0097090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of presynaptic membrane organization","synonyms":[{"name":"down regulation of presynaptic membrane organisation","type":"exact"},{"name":"down regulation of presynaptic membrane organization","type":"exact"},{"name":"down-regulation of presynaptic membrane organisation","type":"exact"},{"name":"down-regulation of presynaptic membrane organization","type":"exact"},{"name":"downregulation of presynaptic membrane organisation","type":"exact"},{"name":"downregulation of presynaptic membrane organization","type":"exact"},{"name":"inhibition of presynaptic membrane organisation","type":"narrow"},{"name":"inhibition of presynaptic membrane organization","type":"narrow"},{"name":"negative regulation of pre-synaptic membrane organization","type":"exact"},{"name":"negative regulation of presynaptic membrane organisation","type":"exact"}],"termid":"GO:1901630"}


id: PBO:0055625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3064","termid":"PBO:0055625"}


id: GO:0048752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the semicircular canals are generated and organized.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal morphogenesis","synonyms":[{"name":"embryonic semicircular canal morphogenesis","type":"exact"}],"termid":"GO:0048752"}


id: GO:0016163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16 ATP + 16 H2O + N2 + 8 reduced [2Fe-2S]-[ferredoxin] = 16 ADP + 6 H+ + H2 + 2 NH4+ + 8 oxidized [2Fe-2S]-[ferredoxin] + 16 phosphate.","definition_xrefs":["RHEA:21448","PMID:15382920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor","termid":"GO:0016732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitrogenase activity","secondary_identifiers":["EC:1.18.6.1","MetaCyc:NITROGENASE-RXN","UM-BBD_reactionID:r1810"],"synonyms":[{"name":"iron-iron nitrogenase activity","type":"narrow"},{"name":"molybdenum-iron nitrogenase activity","type":"narrow"},{"name":"reduced ferredoxin:dinitrogen oxidoreductase (ATP-hydrolysing) activity","type":"related"},{"name":"vanadium-iron nitrogenase activity","type":"narrow"}],"termid":"GO:0016163"}


id: MONDO:0011587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 15q21-q22.","definition_xrefs":["PMID:11133359","DOID:0110254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset sutural cataract","termid":"MONDO:0020372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 25","secondary_identifiers":["UMLS:C1854021","MEDGEN:340116","GARD:18232","OMIM:605728","MESH:C565301"],"synonyms":[{"name":"CCSSO","type":"exact"},{"name":"CTRCT25","type":"exact"},{"name":"cataract 25","type":"exact"},{"name":"cataract type 25","type":"exact"},{"name":"cataract, central pouch-like, with sutural opacities","type":"related"},{"name":"cataract, central saccular, with sutural opacities","type":"related"},{"name":"central pouch-like cataract with sutural opacities","type":"exact"},{"name":"central saccular cataract with sutural opacities","type":"exact"}],"termid":"MONDO:0011587","xrefs":{"Monarch":{"xref_id":"0011587"}}}


id: MONDO:0013789
data:
  {"annotated_genes":["SJAG_01069"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86198],"is_not":false,"summary":null,"term":"MONDO:0013789"}]},"cv_name":"mondo","definition":"DDOST-CDG is a form of congenital disorders of N-linked glycosylation characterized by failure to thrive, developmental delay, hypotonia, strabismus and hepatic dysfunction. The disease is caused by mutations in the gene DDOST (1p36.1).","definition_xrefs":["Orphanet:300536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"DDOST-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614507","SCTID:733083006","GARD:12398","DOID:0080569","MEDGEN:482714","UMLS:C3281084"],"synonyms":[{"name":"CDG syndrome type Ir","type":"exact"},{"name":"CDG-Ir","type":"exact"},{"name":"CDG1R","type":"exact"},{"name":"DDOST-CDG","type":"exact"},{"name":"DDOST-CDG (CDG-Ir)","type":"related"},{"name":"DDOST-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type Ir","type":"exact"},{"name":"congenital disorder of glycosylation type 1r","type":"exact"},{"name":"congenital disorder of glycosylation type Ir","type":"exact"},{"name":"congenital disorder of glycosylation, type Ir","type":"related"}],"termid":"MONDO:0013789","terms_by_termid":{"MONDO:0013789":null},"xrefs":{"Monarch":{"xref_id":"0013789"}}}


id: PBO:0083055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diadenosine and diphosphoinositol polyphosphate phosphatase; hydrolyzes diphosphorylated inositol polyphosphates and diadenosine polyphosphates; high specificity for diadenosine hexa- and pentaphosphates; contains endopolyphosphatase activity with a high affinity for polyphosphates, an activity also observed for its human DIPP homologs; possesses mRNA decapping activity; nudix hydrolase family member; protein abundance increases in response to DNA replication stress","termid":"PBO:0083055"}


id: GO:0003073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the force with which blood travels through the systemic arterial circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}


id: GO:0006500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein lipidation","termid":"GO:0006498"},{"relation_name":"is_a","term_name":"protein palmitoylation","termid":"GO:0018345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"N-terminal protein palmitoylation","termid":"GO:0006500"}


id: MONDO:0012665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the BFSP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 33","secondary_identifiers":["GARD:18236","Orphanet:217052","Orphanet:217046","MESH:C566955","MEDGEN:814437","DOID:0110264","OMIM:611391","UMLS:C3808107"],"synonyms":[{"name":"BFSP1 early-onset non-syndromic cataract","type":"exact"},{"name":"CTRCT33","type":"exact"},{"name":"cataract 33","type":"exact"},{"name":"cataract 33, cortical","type":"related"},{"name":"cataract 33, multiple types","type":"related"},{"name":"cataract type 33","type":"exact"},{"name":"cortical cataract 33","type":"narrow"},{"name":"early-onset non-syndromic cataract caused by mutation in BFSP1","type":"exact"}],"termid":"MONDO:0012665","xrefs":{"Monarch":{"xref_id":"0012665"}}}


id: GO:0061206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephros are generated and organized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephros morphogenesis","synonyms":[{"name":"Wolffian body morphogenesis","type":"exact"}],"termid":"GO:0061206"}


id: MONDO:0020157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic palpebral coloboma (obsolete MONDO:0020157)","secondary_identifiers":["Orphanet:98566"],"termid":"MONDO:0020157","xrefs":{"Monarch":{"xref_id":"0020157"}}}


id: GO:0009737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to abscisic acid","synonyms":[{"name":"response to abscisic acid stimulus","type":"exact"}],"termid":"GO:0009737"}


id: PBO:0044545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAP divergent transcript","termid":"PBO:0044545"}


id: MONDO:0850445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peritoneal benign neoplasm that is characterized by the presence of prominent hemangiopericytoma-like vessels.","definition_xrefs":["DOID:0081026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal benign neoplasm","termid":"MONDO:0000650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign peritoneal solitary fibrous tumor","termid":"MONDO:0850445","xrefs":{"Monarch":{"xref_id":"0850445"}}}


id: GO:0016198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition of molecules at a choice point by an axon growth cone; at a choice point the growth cone determines the direction of its future growth.","definition_xrefs":["PMID:10218152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon choice point recognition","termid":"GO:0016198"}


id: GO:0070902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in a mitochondrial tRNA molecule.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthesis","termid":"GO:0031119"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0140053","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tRNA pseudouridine synthesis","termid":"GO:0070902"}


id: GO:0071273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.","definition_xrefs":["GOC:ecd","GOC:mah","PMID:22193538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphine metabolic process","termid":"GO:0071272"},{"relation_name":"is_a","term_name":"isoquinoline alkaloid catabolic process","termid":"GO:0071274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphine catabolic process","synonyms":[{"name":"morphine breakdown","type":"exact"},{"name":"morphine catabolism","type":"exact"},{"name":"morphine degradation","type":"exact"}],"termid":"GO:0071273"}


id: GO:0060406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of penile erection. Penile erection is the hardening, enlarging and rising of the penis which often occurs in the sexually aroused male and enables sexual intercourse. Achieved by increased inflow of blood into the vessels of erectile tissue, and decreased outflow.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of penile erection","termid":"GO:0060405"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"penile erection","termid":"GO:0043084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of penile erection","termid":"GO:0060406"}


id: PBO:0086912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Y' element ATP-dependent helicase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YML133C contains an intron","termid":"PBO:0086912"}


id: PBO:0080042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 28","termid":"PBO:0080042"}


id: MONDO:0014759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the HNMT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 51","secondary_identifiers":["DOID:0081214","OMIM:616739","UMLS:C4225220","GARD:22571","MEDGEN:903243"],"synonyms":[{"name":"HNMT autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT51","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in HNMT","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 51","type":"exact"},{"name":"intellectual disability, autosomal recessive 51","type":"exact"},{"name":"intellectual disability, autosomal recessive type 51","type":"exact"},{"name":"mental retardation, autosomal recessive 51","type":"exact"},{"name":"mental retardation, autosomal recessive type 51","type":"exact"}],"termid":"MONDO:0014759","xrefs":{"Monarch":{"xref_id":"0014759"}}}


id: PR:O74873
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec23B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec23-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.07","secondary_identifiers":["UniProtKB:O74873"],"synonyms":[{"name":"Spom972h-SEC23B","type":"exact"}],"termid":"PR:O74873"}


id: GO:1905766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protection from non-homologous end joining at telomere.","definition_xrefs":["GO_REF:0000058","GOC:nc","GOC:TermGenie","GOC:BHF_telomere","GOC:BHF","PMID:14690602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance in response to DNA damage","termid":"GO:1904507"},{"relation_name":"is_a","term_name":"regulation of protection from non-homologous end joining at telomere","termid":"GO:1905764"},{"relation_name":"positively_regulates","term_name":"protection from non-homologous end joining at telomere","termid":"GO:0031848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protection from non-homologous end joining at telomere","synonyms":[{"name":"activation of protection from NHEJ-mediated telomere fusion","type":"narrow"},{"name":"activation of protection from non-homologous end joining at telomere","type":"narrow"},{"name":"positive regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"up regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"up regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"up-regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"up-regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"upregulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"upregulation of protection from non-homologous end joining at telomere","type":"exact"}],"termid":"GO:1905766"}


id: PBO:0078117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 6","termid":"PBO:0078117"}


id: PBO:0001005
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPAF2 deficiency","termid":"PBO:0001005"}


id: MONDO:0011188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arrhythmogenic right ventricular dysplasia associated with variation in the region 14q12-q22.","definition_xrefs":["PMID:8824801","DOID:0110072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 3","secondary_identifiers":["MESH:C566584","UMLS:C1865882","MEDGEN:356108","OMIM:602086"],"synonyms":[{"name":"ARVC3","type":"exact"},{"name":"ARVD3","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 3","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 3","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 3","type":"related"},{"name":"familial arrhythmogenic right ventricular dysplasia 3","type":"exact"}],"termid":"MONDO:0011188","xrefs":{"Monarch":{"xref_id":"0011188"}}}


id: PBO:0065794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3HDM2 divergent transcript","termid":"PBO:0065794"}


id: SO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a glutamine anticodon, and a 3' glutamine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"glutamic_acid_tRNA_primary_transcript","termid":"SO:0000216"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminyl_tRNA","synonyms":[{"name":"glutaminyl tRNA","type":"exact"},{"name":"glutaminyl-transfer RNA","type":"exact"},{"name":"glutaminyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000259"}


id: PBO:0034360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-related_via_evidence_or_inference_to","termid":"PBO:0034360"}


id: GO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell.","definition_xrefs":["ISBN:0781735149","PMID:16730260","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tumor cell","termid":"GO:0002347"}


id: GO:0110018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits in a cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate circRNA translation.","definition_xrefs":["PMID:28344080","PMID:28344082","GOC:sp","PMID:28281539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0002181","GO:0010467"],"is_obsolete":false,"name":"cap-independent translational initiation of circular RNA","synonyms":[{"name":"cap-independent translational initiation of circRNA","type":"exact"}],"termid":"GO:0110018"}


id: GO:0051364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formylation of the N-terminal proline of proteins to form the derivative N-formylproline.","definition_xrefs":["PMID:12051774","PMID:5464655","RESID:AA0384"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-proline N-formylation (obsolete GO:0051364)","termid":"GO:0051364"}


id: PBO:0004139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sus1","termid":"PBO:0004139"}


id: MONDO:0009025
data:
  {"annotated_genes":["SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84956],"is_not":false,"summary":null,"term":"MONDO:0009025"}]},"cv_name":"mondo","definition":"Apparent mineralocorticoid excess (AME) is a rare form of pseudohyperaldosteronism characterized by very early-onset and severe hypertension, associated with low renin levels and hypoaldosteronism.","definition_xrefs":["Orphanet:320"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"adrenal gland hyperfunction","termid":"MONDO:0006640"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic hypertension (obsolete MONDO:0015512)","termid":"MONDO:0015512"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"steroid inherited metabolic disorder","termid":"MONDO:0005523"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01036":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"apparent mineralocorticoid excess","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2100130","NCIT:C131083","SCTID:703256004","GARD:433","MEDGEN:90983","OMIM:218030","DOID:0090121","MESH:C537422","SCTID:237770005","UMLS:C0342488","DOID:4367","NCIT:C123231","NANDO:2200362","icd11.foundation:1737310323","MESH:D043204","ICD9:255.3"],"synonyms":[{"name":"11 Beta-hydroxysteroid dehydrogenase type 2 deficiency","type":"exact"},{"name":"11-beta-hydroxysteroid dehydrogenase deficiency type 2","type":"exact"},{"name":"AME","type":"related"},{"name":"AME 1","type":"related"},{"name":"APE","type":"exact"},{"name":"Ame1","type":"related"},{"name":"Ulick syndrome","type":"exact"},{"name":"apparent mineralocorticoid EXCESS","type":"related"},{"name":"apparent mineralocorticoid excess","type":"exact"},{"name":"apparent mineralocorticoid excess syndrome","type":"exact"},{"name":"cortisol 11-Beta-ketoreductase deficiency","type":"related"},{"name":"cortisol 11-beta-ketoreductase deficiency","type":"exact"},{"name":"syndrome of apparent mineralocorticoid Excess","type":"exact"}],"termid":"MONDO:0009025","terms_by_termid":{"MONDO:0009025":null},"xrefs":{"Monarch":{"xref_id":"0009025"}}}


id: GO:0010062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that suppresses trichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of trichoblast fate specification","termid":"GO:0010061"},{"relation_name":"is_a","term_name":"negative regulation of plant epidermal cell differentiation","termid":"GO:1903889"},{"relation_name":"negatively_regulates","term_name":"trichoblast fate specification","termid":"GO:0010057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of trichoblast fate specification","synonyms":[{"name":"down regulation of trichoblast fate","type":"exact"},{"name":"down-regulation of trichoblast fate","type":"exact"},{"name":"downregulation of trichoblast fate","type":"exact"},{"name":"inhibition of trichoblast fate","type":"narrow"}],"termid":"GO:0010062"}


id: GO:0033886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2- and 3-sulfate groups of the polysulfates of cellulose and charonin.","definition_xrefs":["EC:3.1.6.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"cellulose-polysulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.7-RXN"],"synonyms":[{"name":"cellulose-sulfate sulfohydrolase activity","type":"related"}],"termid":"GO:0033886"}


id: PATO:0001824
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wetness quality inhering in a bearer by virtue of the bearer's not being covered by a liquid.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wetness","termid":"PATO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dry","termid":"PATO:0001824"}


id: PBO:0077772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 40","termid":"PBO:0077772"}


id: MONDO:0004206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the pulmonary vein. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5374"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pulmonary artery leiomyosarcoma","termid":"MONDO:0004207"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"},{"relation_name":"is_a","term_name":"great vessel cancer","termid":"MONDO:0040676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary vein leiomyosarcoma","secondary_identifiers":["DOID:7388","MEDGEN:235513","UMLS:C1335575"],"synonyms":[{"name":"leiomyosarcoma of pulmonary vein","type":"exact"},{"name":"leiomyosarcoma of the pulmonary vein","type":"exact"},{"name":"pulmonary vein leiomyosarcoma","type":"exact"}],"termid":"MONDO:0004206","xrefs":{"Monarch":{"xref_id":"0004206"}}}


id: GO:1905639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial mRNA catabolic process.","definition_xrefs":["PMID:27122350","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial RNA catabolic process","termid":"GO:0000962"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of mitochondrial mRNA catabolic process","termid":"GO:1905637"},{"relation_name":"positively_regulates","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mitochondrial mRNA catabolic process","synonyms":[{"name":"activation of mitochondrial mRNA catabolic process","type":"narrow"},{"name":"up regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"up-regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"upregulation of mitochondrial mRNA catabolic process","type":"exact"}],"termid":"GO:1905639"}


id: MONDO:0007589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FZD4-related exudative vitreoretinopathy","termid":"MONDO:1040041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"exudative vitreoretinopathy 1","secondary_identifiers":["GARD:15068","UMLS:C1851402","MESH:C536382","OMIM:133780","NCIT:C175048","DOID:0111412","MEDGEN:343561"],"synonyms":[{"name":"Criswick-Schepens syndrome","type":"related"},{"name":"EVR1","type":"related"},{"name":"FEVR, autosomal dominant","type":"related"},{"name":"exudative vitreoretinopathy 1","type":"exact"},{"name":"exudative vitreoretinopathy type 1","type":"exact"},{"name":"exudative vitreoretinopathy, familial, autosomal dominant","type":"related"},{"name":"retinopathy of prematurity","type":"related"}],"termid":"MONDO:0007589","xrefs":{"Monarch":{"xref_id":"0007589"}}}


id: GO:1990785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of water immersion while being held immobile.","definition_xrefs":["PMID:10882227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to immobilization stress","termid":"GO:0035902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water-immersion restraint stress","synonyms":[{"name":"response to immobilization stress combined with water immersion","type":"exact"}],"termid":"GO:1990785"}


id: PBO:0045153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 9","termid":"PBO:0045153"}


id: MONDO:0010474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia with linear skin defects syndrome in which the cause of the disease is a mutation in the COX7B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear skin defects with multiple congenital anomalies","termid":"MONDO:0010672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"linear skin defects with multiple congenital anomalies 2","secondary_identifiers":["MEDGEN:763835","DOID:0111877","OMIM:300887","UMLS:C3550921","GARD:15272"],"synonyms":[{"name":"COX7B microphthalmia with linear skin defects syndrome","type":"exact"},{"name":"LSDMCA2","type":"related"},{"name":"aplasia cutis congenita, Reticulolinear, with microcephaly, Facial Dysmorphism, and Other congenital anomalies","type":"related"},{"name":"linear skin defects with multiple congenital anomalies 2","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies 2, X-linked dominant","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies type 2","type":"exact"},{"name":"microphthalmia with linear skin defects syndrome caused by mutation in COX7B","type":"exact"}],"termid":"MONDO:0010474","xrefs":{"Monarch":{"xref_id":"0010474"}}}


id: PBO:0112847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 8-1","termid":"PBO:0112847"}


id: MONDO:0043762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal pregnancy in which the conception is implanted in the fallopian tube.","definition_xrefs":["NCIT:C92946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectopic pregnancy","termid":"MONDO:0000755"},{"relation_name":"is_a","term_name":"fallopian tube disorder","termid":"MONDO:0002156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubal pregnancy","secondary_identifiers":["UMLS:C0032994","MEDGEN:10901","MESH:D011274","icd11.foundation:913821868","SCTID:79586000"],"synonyms":[{"name":"Pregnancies, tubal","type":"related"},{"name":"ectopic pregnancy of fallopian tube","type":"exact"},{"name":"fallopian pregnancy","type":"related"},{"name":"fallopian tube ectopic pregnancy","type":"exact"},{"name":"fallopian tube pregnancy","type":"related"},{"name":"tubal Pregnancies","type":"related"},{"name":"tubal pregnancy","type":"exact"}],"termid":"MONDO:0043762","xrefs":{"Monarch":{"xref_id":"0043762"}}}


id: PBO:0083306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps almost completely with the verified ORF TNA1/YGR260W","termid":"PBO:0083306"}


id: MONDO:0009634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia with meatal atresia and conductive deafness","secondary_identifiers":["MEDGEN:419093","OMIM:251800","MESH:C537469","UMLS:C2931502"],"synonyms":[{"name":"Gupta Patton syndrome","type":"related"},{"name":"familial microtia and meatal atresia","type":"related"},{"name":"familial microtia with meatal atresia and conductive deafness","type":"related"},{"name":"microtia meatal atresia deafness dominant","type":"related"},{"name":"microtia with meatal atresia and conductive deafness","type":"exact"},{"name":"microtia, meatal atresia and conductive deafness","type":"related"}],"termid":"MONDO:0009634","xrefs":{"Monarch":{"xref_id":"0009634"}}}


id: PR:O13788
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.10","synonyms":[{"name":"Spom972h-ssr1","type":"exact"}],"termid":"PR:O13788"}


id: PBO:0081693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 615","termid":"PBO:0081693"}


id: PBO:0044976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 16","termid":"PBO:0044976"}


id: PBO:0079757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urocortin 3","termid":"PBO:0079757"}


id: PBO:0043738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 17","termid":"PBO:0043738"}


id: GO:0031263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + amine(out) = ADP + phosphate + amine(in).","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase-coupled amine transporter activity (obsolete GO:0031263)","synonyms":[{"name":"ATP-dependent amine transporter activity","type":"exact"},{"name":"amine ABC transporter","type":"narrow"},{"name":"amine-transporting ATPase activity","type":"exact"}],"termid":"GO:0031263"}


id: PBO:0110335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V1F pseudogene 1","termid":"PBO:0110335"}


id: FYECO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Sorbitol was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol absent","termid":"FYECO:0000171"}


id: GO:0009240
data:
  {"annotated_genes":["SJAG_04307","SJAG_03349","SJAG_03715","SJAG_04865","SJAG_01187","SJAG_02380","SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74505],"is_not":false,"summary":null,"term":"GO:0009240"},{"annotations":[76979,114647,79769,74028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[115222,111120],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate, an isomer of dimethylallyl diphosphate and the key precursor of all isoprenoids.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"isopentenyl diphosphate metabolic process","termid":"GO:0046490"},{"relation_name":"part_of","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01474":null,"SJAG_02380":null,"SJAG_03349":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"IPP biosynthesis","type":"exact"},{"name":"IPP biosynthetic process","type":"exact"},{"name":"isopentenyl diphosphate anabolism","type":"exact"},{"name":"isopentenyl diphosphate biosynthesis","type":"exact"},{"name":"isopentenyl diphosphate formation","type":"exact"},{"name":"isopentenyl diphosphate synthesis","type":"exact"},{"name":"isopentenyl pyrophosphate biosynthesis","type":"exact"},{"name":"isopentenyl pyrophosphate biosynthetic process","type":"exact"}],"termid":"GO:0009240","terms_by_termid":{"GO:0009240":null,"GO:0019287":null,"GO:2001211":null}}


id: GO:0015700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of arsenite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"arsenite transport","termid":"GO:0015700"}


id: GO:2000751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any histone H3-T3 phosphorylation that is involved in chromosome passenger complex localization to kinetochore.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-T3 phosphorylation involved in chromosome passenger complex localization to kinetochore (obsolete GO:2000751)","synonyms":[{"name":"histone H3-T3 phosphorylation of CPC complex localization to kinetochore","type":"exact"},{"name":"histone H3-T3 phosphorylation of CPC localization to kinetochore","type":"exact"},{"name":"histone H3-T3 phosphorylation of chromosomal passenger complex localization to kinetochore","type":"exact"},{"name":"histone H3-T3 phosphorylation of chromosome passenger complex localisation to kinetochore","type":"related"},{"name":"histone H3-T3 phosphorylation of chromosome passenger complex localization to kinetochore","type":"exact"}],"termid":"GO:2000751"}


id: PBO:0088920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in vesicle-mediated transport","termid":"PBO:0088920"}


id: PBO:0032747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B gamma subunit","termid":"PBO:0032747"}


id: GO:1905857
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89451],"is_not":false,"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pentose-phosphate shunt.","definition_xrefs":["GOC:TermGenie","PMID:19015259","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentose-phosphate shunt","termid":"GO:0043456"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"positively_regulates","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006091","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"positive regulation of pentose-phosphate shunt","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905857","terms_by_termid":{"GO:1905857":null}}


id: GO:0090287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"}


id: FYECO:0000237
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown for more than 48 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth >48 hrs","synonyms":[{"name":"growth >48 hours","type":"exact"}],"termid":"FYECO:0000237"}


id: GO:0140573
data:
  {"annotated_genes":["SJAG_00302"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119272],"is_not":false,"summary":null,"term":"GO:0140573"}]},"cv_name":"cellular_component","definition":"A complex comprised of DNA wound around a multisubunit core and associated proteins containing the histone H3, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["PMID:33155135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome","termid":"GO:0000786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"histone H3-containing nucleosome","references_by_uniquename":{"PMID:24184107":null},"synonyms":[{"name":"histone H3 containing nucleosome","type":"exact"}],"termid":"GO:0140573","terms_by_termid":{"GO:0140573":null}}


id: MONDO:0032598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 68","secondary_identifiers":["GARD:16310","UMLS:C4748688","DOID:0112204","MEDGEN:1648479","OMIM:618201"],"synonyms":[{"name":"DEE68","type":"exact"},{"name":"EIEE68","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 68","type":"exact"},{"name":"developmental and epileptic encephalopathy 68","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 68","type":"exact"}],"termid":"MONDO:0032598","xrefs":{"Monarch":{"xref_id":"0032598"}}}


id: GO:0009101
data:
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id: SO:0000263
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id: FYPO:0001892
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id: GO:0150146
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id: MONDO:1010945
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id: PBO:0078578
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id: MONDO:0019056
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id: GO:0000511
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  {"annotated_genes":["SJAG_00942","SJAG_02314","SJAG_02035","SJAG_03128","SJAG_02416"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97901,107856,111026,113352,116649],"is_not":false,"summary":null,"term":"GO:0000511"}]},"cv_name":"molecular_function","definition":"A histone chaperone that carries a H2A-H2B histone complex.","definition_xrefs":["PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone chaperone activity","termid":"GO:0140713"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00942":null,"SJAG_02035":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_03128":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104","GO:0140597"],"is_obsolete":false,"name":"H2A-H2B histone complex chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H2A-H2B histone carrier activity","type":"exact"}],"termid":"GO:0000511","terms_by_termid":{"GO:0000511":null}}


id: PBO:0084468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKK involved in the protein kinase C signaling pathway; involved in control of cell integrity; upon activation by Bck1p phosphorylates downstream target, Slt2p; functionally redundant with Mkk2p; MKK1 has a paralog, MKK2, that arose from the whole genome duplication","termid":"PBO:0084468"}


id: GO:0031134
data:
  {"annotated_genes":["SJAG_05266","SJAG_02451","SJAG_05319","SJAG_01601","SJAG_03437","SJAG_04412","SJAG_04076","SJAG_01837","SJAG_03543","SJAG_00082","SJAG_01805","SJAG_00678","SJAG_03048","SJAG_00335","SJAG_01371","SJAG_04259","SJAG_01211","SJAG_00302","SJAG_01297","SJAG_04623","SJAG_02814","SJAG_02731","SJAG_02336","SJAG_00918","SJAG_03989","SJAG_01775","SJAG_05220","SJAG_00930","SJAG_01224","SJAG_01082","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108896],"is_not":false,"summary":null,"term":"GO:0031134"},{"annotations":[112974,116657,112367,93959,93595,98885,100279,112366,89121,113839,88901,89505,102188,108012,109641,107257,118432,98380,103651,77706,108639,103297,112368,114243,90744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990758"},{"annotations":[110951,93569,116420,89761,102133],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"The cell cycle process in which sister chromatids establish stable attachments to microtubules emanating from opposite spindle poles.","definition_xrefs":["PMID:15309047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"part_of","term_name":"sister chromatid segregation","termid":"GO:0000819"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01601":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03437":null,"SJAG_03543":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"sister chromatid biorientation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromosome biorientation","type":"exact"},{"name":"sister kinetochore biorientation","type":"exact"}],"termid":"GO:0031134","terms_by_termid":{"GO:0031134":null,"GO:0140429":null,"GO:1990758":null}}


id: GO:0004622
data:
  {"annotated_genes":["SJAG_02091","SJAG_03204","SJAG_02100","SJAG_01198","SJAG_04110","SJAG_02093"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64803,65776,67337,70423,93685,113804],"is_not":false,"summary":null,"term":"GO:0004622"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-acyl-sn-glycero-3-phosphocholine + H2O = a fatty acid + H+ + sn-glycerol 3-phosphocholine.","definition_xrefs":["EC:3.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01198":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_03204":null,"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"lysophospholipase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482571","Reactome:R-HSA-1482629","Reactome:R-HSA-6814766","Reactome:R-HSA-1482696","Reactome:R-HSA-1482685","Reactome:R-HSA-6814254","Reactome:R-HSA-6814778","Reactome:R-HSA-8847912","Reactome:R-HSA-1482612","MetaCyc:LYSOPHOSPHOLIPASE-RXN","Reactome:R-HSA-1482545","GO:0045126","RHEA:15177"],"synonyms":[{"name":"2-lysophosphatidylcholine acylhydrolase activity","type":"related"},{"name":"lecithinase B activity","type":"related"},{"name":"lecitholipase activity","type":"related"},{"name":"lysolecithinase activity","type":"related"},{"name":"lysophopholipase L2","type":"related"},{"name":"lysophosphatidase activity","type":"related"},{"name":"lysophosphatidylcholine hydrolase activity","type":"related"},{"name":"lysophospholipase A1","type":"related"},{"name":"phosphatidase B","type":"related"},{"name":"phospholipase B activity","type":"related"}],"termid":"GO:0004622","terms_by_termid":{"GO:0004622":null}}


id: GO:0001834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proliferation of cells in the trophectoderm.","definition_xrefs":["GOC:dph","ISBN:0124020607","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"blastocyst growth","termid":"GO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell proliferation","synonyms":[{"name":"trophectoderm cell proliferation","type":"exact"}],"termid":"GO:0001834"}


id: PBO:0034408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localizes_to_(obsolete_localizes_to)","termid":"PBO:0034408"}


id: PBO:0074531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA E","termid":"PBO:0074531"}


id: GO:0008527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"taste receptor activity","synonyms":[{"name":"gustatory receptor","type":"exact"}],"termid":"GO:0008527"}


id: PBO:0084784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial phosphatidate cytidylyltransferase (CDP-DAG synthase); required for cardiolipin biosynthesis; viability of null mutant is strain-dependent; mRNA is targeted to the bud; mutant displays defect in mitochondrial protein import, likely due to altered membrane lipid composition","termid":"PBO:0084784"}


id: MONDO:0014795
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85563],"is_not":false,"summary":null,"term":"MONDO:0014795"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"is_obsolete":false,"name":"exercise intolerance, riboflavin-responsive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225187","OMIM:616839","MEDGEN:896368"],"synonyms":[{"name":"RREI","type":"related"},{"name":"exercise intolerance, riboflavin-responsive","type":"exact"}],"termid":"MONDO:0014795","terms_by_termid":{"MONDO:0014795":null},"xrefs":{"Monarch":{"xref_id":"0014795"}}}


id: MONDO:0003756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant epithelial tumor of the ovary characterized by the presence of neoplastic epithelial cells that contain intracytoplasmic mucin and may resemble the epithelial cells of the endocervix or gastrointestinal tract.","definition_xrefs":["NCIT:C5242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian mucinous neoplasm","secondary_identifiers":["MEDGEN:235419","DOID:6067","UMLS:C1335168"],"synonyms":[{"name":"malignant ovarian mucinous neoplasm","type":"narrow"},{"name":"mucinous neoplasm of ovary","type":"exact"},{"name":"mucinous neoplasm of the ovary","type":"exact"},{"name":"mucinous tumor of ovary","type":"exact"},{"name":"mucinous tumor of the ovary","type":"exact"},{"name":"mucinous tumour of ovary","type":"exact"},{"name":"mucinous tumour of the ovary","type":"exact"},{"name":"ovarian mucinous neoplasm","type":"exact"},{"name":"ovarian mucinous tumor","type":"exact"},{"name":"ovarian mucinous tumour","type":"exact"}],"termid":"MONDO:0003756","xrefs":{"Monarch":{"xref_id":"0003756"}}}


id: MONDO:0971050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated optic neuritis","termid":"MONDO:0044688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"relapsing isolated optic neuritis","secondary_identifiers":["Orphanet:659634","UMLS:C5925139","MEDGEN:1863611"],"termid":"MONDO:0971050","xrefs":{"Monarch":{"xref_id":"0971050"}}}


id: PR:Q7LL14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LL14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 small nuclear ribonucleoprotein B'' (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.09c","synonyms":[{"name":"Spom972h-msl1","type":"exact"},{"name":"U2 snRNP B'' (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q7LL14"}


id: MOD:00183
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-2'-bromophenylalanine.","definition_xrefs":["RESID:AA0174","DeltaMass:83","PubMed:2076468","PubMed:9033387","PubMed:2059627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated L-phenylalanine","termid":"MOD:00972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2'-bromophenylalanine","synonyms":[{"name":"(S)-2-amino-3-(2-bromophenyl)propanoic acid","type":"exact"},{"name":"2'BrPhe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-2'-bromophenylalanine","type":"exact"},{"name":"L-o-bromination of Phe with 79Br","type":"exact"},{"name":"bromination","type":"related"},{"name":"o-bromophenylalanine","type":"exact"},{"name":"ortho-bromophenylalanine","type":"exact"}],"termid":"MOD:00183"}


id: PBO:0072059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 29","termid":"PBO:0072059"}


id: MONDO:0017368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic disease with skin involvement (obsolete MONDO:0017368)","secondary_identifiers":["Orphanet:290836"],"termid":"MONDO:0017368","xrefs":{"Monarch":{"xref_id":"0017368"}}}


id: PBO:0045138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 6","termid":"PBO:0045138"}


id: PBO:0058068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4287","termid":"PBO:0058068"}


id: GO:0048728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proboscis over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proboscis development","secondary_identifiers":["GO:0016349"],"termid":"GO:0048728"}


id: PBO:0089002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spo12 family nuclear protein","termid":"PBO:0089002"}


id: PATO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wetness quality that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"wet","termid":"PATO:0001823"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased wetness","termid":"PATO:0001825"}


id: FYPO:0001100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing Gentian violet (also known as crystal violet).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on Gentian violet","synonyms":[{"name":"normal cell population growth in presence of Gentian violet","type":"exact"},{"name":"normal cell population growth on Gentian violet","type":"exact"},{"name":"normal cell population growth on crystal violet","type":"exact"},{"name":"normal cell population growth on {4-[Bis-(4-dimethylamino-phenyl)-methylene]-cyclohexa-2,5-dienylidene}-dimethyl-ammonium chloride","type":"exact"},{"name":"normal vegetative cell population growth on Gentian violet","type":"exact"}],"termid":"FYPO:0001100"}


id: PBO:0062065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 3","termid":"PBO:0062065"}


id: PBO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine deaminase Ccd1 (predicted)","termid":"PBO:0002223"}


id: GO:0042947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucosides from one side of a membrane to the other. Glucosides are glycosides in which the sugar group is a glucose residue.","definition_xrefs":["GOC:jl","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}


id: GO:0052050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other organism by a type IV secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance secreted by type IV secretion system (obsolete GO:0052050)","termid":"GO:0052050"}


id: GO:1905632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an euchromatin.","definition_xrefs":["PMID:20889714","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to euchromatin","synonyms":[{"name":"protein localisation in euchromatin","type":"exact"},{"name":"protein localisation to euchromatin","type":"exact"},{"name":"protein localization in euchromatin","type":"exact"}],"termid":"GO:1905632"}


id: MONDO:0100324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of focal segmental glomerulosclerosis without identifiable etiology. Primary (idiopathic) FSGS has been associated with the presence of circulating permeability factors/cytokines, which cause foot process effacement and proteinuria.","definition_xrefs":["PMID:30335305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal segmental glomerulosclerosis","termid":"MONDO:0100313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"primary focal segmental glomerulosclerosis","secondary_identifiers":["UMLS:C1709661","MEDGEN:313617"],"termid":"MONDO:0100324","xrefs":{"Monarch":{"xref_id":"0100324"}}}


id: PBO:0079539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase 1 like 1","termid":"PBO:0079539"}


id: PBO:0051103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-14 (pseudogene)","termid":"PBO:0051103"}


id: PBO:0074852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 41","termid":"PBO:0074852"}


id: PBO:0050239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 17","termid":"PBO:0050239"}


id: MONDO:0015448
data:
  {"annotated_genes":["SJAG_00755","SJAG_03490","SJAG_00354","SJAG_00601","SJAG_00080","SJAG_05305","SJAG_04560","SJAG_02646","SJAG_01490","SJAG_03099","SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032909"},{"annotations":[85488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859321"},{"annotations":[86243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007415"},{"annotations":[84905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014063"},{"annotations":[84906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014064"},{"annotations":[84904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014065"},{"annotations":[84908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014066"},{"annotations":[85707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014194"},{"annotations":[86191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014356"},{"annotations":[86197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014364"},{"annotations":[86471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014496"}]},"cv_name":"mondo","definition":"Isolated complex III deficiency is a rare, genetic, mitochondrial oxidative phosphorylation disorder characterized by a wide spectrum of clinical manifestations ranging from isolated myopathy or transient hepatopathy to severe multisystem disorder (that may include hypotonia, failure to thrive, psychomotor delay, cardiomyopathy, encephalopathy, renal tubulopathy, hearing impairment, lactic acidosis, hypoglycemia and other signs and symptoms).","definition_xrefs":["Orphanet:1460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00354":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_01405":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03099":null,"SJAG_03490":null,"SJAG_04560":null,"SJAG_05305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex III deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:377658","GARD:8295","UMLS:C1852372","DOID:0111139"],"synonyms":[{"name":"isolated CoQ-cytochrome C reductase deficiency","type":"exact"},{"name":"isolated coenzyme Q-cytochrome C reductase deficiency","type":"exact"},{"name":"isolated complex III deficiency","type":"related"},{"name":"isolated mitochondrial respiratory chain complex III deficiency","type":"exact"},{"name":"isolated ubiquinone-cytochrome C reductase deficiency","type":"exact"}],"termid":"MONDO:0015448","terms_by_termid":{"MONDO:0007415":null,"MONDO:0014063":null,"MONDO:0014064":null,"MONDO:0014065":null,"MONDO:0014066":null,"MONDO:0014194":null,"MONDO:0014356":null,"MONDO:0014364":null,"MONDO:0014496":null,"MONDO:0032909":null,"MONDO:0859321":null},"xrefs":{"Monarch":{"xref_id":"0015448"}}}


id: PBO:0038406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within,_positive_effect","termid":"PBO:0038406"}


id: MONDO:0018822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Global developmental delay-visual anomalies-progressive cerebellar atrophy-truncal hypotonia syndrome is a rare, genetic, neurological disorder characterized by mild to severe developmental delay and speech impairment, truncal hypotonia, abnormalities of vision (including cortical visual impairment and abnormal visual-evoked potentials), progressive brain atrophy mainly affecting the cerebellum, and shortened or atrophic corpus callosum. Other clinical findings may include increased muscle tone in the extremities, dystonic posturing, hyporeflexia, scoliosis, postnatal microcephaly and variable facial dysmorphism (e.g. deep-set eyes, gingival hyperplasia, short philtrum and retrognathia).","definition_xrefs":["Orphanet:480898"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"global developmental delay-visual anomalies-progressive cerebellar atrophy-truncal hypotonia syndrome","secondary_identifiers":["GARD:17871","MEDGEN:1798945","UMLS:C5567522"],"termid":"MONDO:0018822","xrefs":{"Monarch":{"xref_id":"0018822"}}}


id: PBO:0000636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Nop58 (predicted)","termid":"PBO:0000636"}


id: PBO:0031144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_beta-glucan_level","termid":"PBO:0031144"}


id: MONDO:0970995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 24","secondary_identifiers":["UMLS:C5935624","MEDGEN:1858807","OMIM:620840"],"termid":"MONDO:0970995","xrefs":{"Monarch":{"xref_id":"0970995"}}}


id: PR:O94387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C29A10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.10c","synonyms":[{"name":"Spom972h-dbl8","type":"exact"}],"termid":"PR:O94387"}


id: MONDO:0005676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An encephalomyelitis of horses, sheep and cattle caused by borna disease virus.","definition_xrefs":["MESH:D001890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"},{"relation_name":"is_a","term_name":"acute disease, non-human animal","termid":"MONDO:1011300"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borna disease","secondary_identifiers":["EFO:0007178"],"synonyms":[{"name":"enzootic encephalomyelitis","type":"related"}],"termid":"MONDO:0005676","xrefs":{"Monarch":{"xref_id":"0005676"}}}


id: FYPO:0006943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an 3'-5' RNA helicase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal 3'-5' RNA helicase activity","termid":"FYPO:0006943"}


id: FYPO:0005203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethionine. Cells stop growing (and may die) at a concentration of ethionine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to ethionine","synonyms":[{"name":"hypersensitive to ethionine","type":"exact"},{"name":"sensitive to DL-ethionine","type":"related"},{"name":"sensitive to S-ethylhomocysteine","type":"exact"},{"name":"sensitive to ethionine during mitotic cell cycle","type":"related"},{"name":"sensitive to ethionine during vegetative growth","type":"exact"}],"termid":"FYPO:0005203"}


id: GO:0036154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of diacylglycerol, through sequential deacylation and re-acylation reactions, to generate diacylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:15364929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol acyl-chain remodeling","termid":"GO:0036155"},{"relation_name":"is_a","term_name":"diacylglycerol metabolic process","termid":"GO:0046339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"diacylglycerol acyl-chain remodeling","synonyms":[{"name":"diacylglycerol acyl-chain remodelling","type":"exact"},{"name":"diglyceride acyl-chain remodeling","type":"exact"}],"termid":"GO:0036154"}


id: MONDO:0007432
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85836,85835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010829"},{"annotations":[85703,85702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014768"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"excluded_subClassOf","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"is_obsolete":false,"name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0751587","NANDO:1200545","MEDGEN:199687","OMIMPS:125310","DOID:13945","ICD9:323.9","ICD9:447.8"],"synonyms":[{"name":"CADASIL","type":"exact"},{"name":"Casil","type":"related"},{"name":"cerebral arteriopathy with subcortical infaracts and leukoencephalopathy","type":"exact"},{"name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","type":"exact"},{"name":"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy","type":"related"},{"name":"dementia, hereditary multi-infarct type","type":"related"}],"termid":"MONDO:0007432","terms_by_termid":{"MONDO:0010829":null,"MONDO:0014768":null},"xrefs":{"Monarch":{"xref_id":"0007432"}}}


id: FYPO:0001102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hydrogen peroxide is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"},{"relation_name":"is_a","term_name":"altered protein level during cellular response to hydrogen peroxide","termid":"FYPO:0001548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased protein accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"increased protein level during cellular response to H2O2","type":"exact"},{"name":"increased protein level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0001102"}


id: GO:0106322
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103232],"is_not":false,"summary":null,"term":"GO:0106322"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione + NAD+ = S-formylglutathione + NADH + H+.","definition_xrefs":["RHEA:19985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity","termid":"GO:0051903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106322","terms_by_termid":{"GO:0106322":null}}


id: GO:1902744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lamellipodium organization.","definition_xrefs":["PMID:16054028","GOC:TermGenie","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of lamellipodium organization","termid":"GO:1902743"},{"relation_name":"negatively_regulates","term_name":"lamellipodium organization","termid":"GO:0097581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellipodium organization","synonyms":[{"name":"down regulation of lamellipodium organization","type":"exact"},{"name":"down-regulation of lamellipodium organization","type":"exact"},{"name":"downregulation of lamellipodium organization","type":"exact"},{"name":"inhibition of lamellipodium organization","type":"narrow"}],"termid":"GO:1902744"}


id: MONDO:0010890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acro-cardio-facial syndrome (ACFS) is a rare genetic disorder characterized by split-hand/split-foot malformation (SHFM), facial anomalies, cleft lip/palate, congenital heart defect (CHD), genital anomalies, and intellectual deficit.","definition_xrefs":["Orphanet:2008"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrocardiofacial syndrome","secondary_identifiers":["GARD:1167","icd11.foundation:976844546","MEDGEN:324947","MESH:C563936","OMIM:600460","DOID:0070419","UMLS:C1838121"],"synonyms":[{"name":"ACFS","type":"exact"},{"name":"CCGE","type":"related"},{"name":"CCGE syndrome","type":"exact"},{"name":"acrocardiofacial syndrome","type":"exact"},{"name":"cleft palate, CARDIAC defect, genital anomalies, and ectrodactyly","type":"related"},{"name":"cleft palate-cardiac defect-genital anomalies-ectrodactyly syndrome","type":"exact"}],"termid":"MONDO:0010890","xrefs":{"Monarch":{"xref_id":"0010890"}}}


id: PBO:0085776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein necessary for stability of L-A dsRNA-containing particles","termid":"PBO:0085776"}


id: MONDO:1010589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"},{"relation_name":"is_a","term_name":"congenital hypothyroidism, goat","termid":"MONDO:1010605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, goat","secondary_identifiers":["OMIA:000424-9925"],"termid":"MONDO:1010589","xrefs":{"Monarch":{"xref_id":"1010589"}}}


id: GO:0006986
data:
  {"annotated_genes":["SJAG_04118","SJAG_01768","SJAG_04103","SJAG_00790","SJAG_00226","SJAG_00681","SJAG_04262","SJAG_04283","SJAG_00564","SJAG_04567","SJAG_02601","SJAG_04471","SJAG_03482","SJAG_03841","SJAG_00530","SJAG_00403","SJAG_03815","SJAG_03611","SJAG_04435","SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109758,109759,102677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034620"},{"annotations":[67911,100992,113951,71008,98472,76051,115772,113818,106931,116519,113549,116969,76997,70441],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030968"},{"annotations":[89278,92863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036498"},{"annotations":[77389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034514"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to topologically incorrect protein","termid":"GO:0035966"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00564":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01516":null,"SJAG_01768":null,"SJAG_02601":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03815":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to unfolded protein","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"heat shock protein activity","type":"related"}],"termid":"GO:0006986","terms_by_termid":{"GO:0030968":null,"GO:0034514":null,"GO:0034620":null,"GO:0036498":null}}


id: PBO:0064466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 3, accessory subunit","termid":"PBO:0064466"}


id: MONDO:0002920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that arises from the ovary and is characterized by the presence of an invasive malignant transitional cell component and nests of benign transitional cells in a fibrotic stroma. When the neoplasm is confined to the ovary, the prognosis is good.","definition_xrefs":["NCIT:C4270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian Brenner tumor","termid":"MONDO:0002370"},{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant ovarian Brenner tumor","secondary_identifiers":["DOID:4217","ICDO:9000/3","MEDGEN:90793","UMLS:C0334495"],"synonyms":[{"name":"malignant Brenner tumor of ovary","type":"exact"},{"name":"malignant Brenner tumor of the ovary","type":"exact"},{"name":"malignant Brenner tumour of ovary","type":"exact"},{"name":"malignant Brenner tumour of the ovary","type":"exact"},{"name":"malignant ovarian Brenner tumor","type":"exact"},{"name":"ovarian Brenner tumor, malignant","type":"exact"}],"termid":"MONDO:0002920","xrefs":{"Monarch":{"xref_id":"0002920"}}}


id: PR:P78794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein CWC15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12718:SF2","PRO:DNx","OMA:SCHPO02687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.06c","secondary_identifiers":["UniProtKB:P78794"],"synonyms":[{"name":"Spom972h-CWC15","type":"exact"},{"name":"complexed with cdc5 protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78794"}


id: PBO:0055200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2625","termid":"PBO:0055200"}


id: PBO:0038569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein family member 3","termid":"PBO:0038569"}


id: PBO:0064147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKNOX2 divergent transcript","termid":"PBO:0064147"}


id: GO:0090433
data:
  {"annotated_genes":["SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105361],"is_not":false,"summary":null,"term":"GO:0090433"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + palmitic acid + CoA = AMP + diphosphate + palmitoyl-CoA.","definition_xrefs":["GOC:al","PMID:18071249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid-CoA ligase activity","termid":"GO:0004467"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"palmitoyl-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-434382"],"synonyms":[{"name":"palmitoyl-CoA synthetase activity","type":"exact"}],"termid":"GO:0090433","terms_by_termid":{"GO:0090433":null}}


id: MONDO:0006312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, localized, nodular and well-circumscribed neoplasm usually seen as a congenital neoplasm or in the first year of life. It is characterized by a biphasic growth pattern and is composed of small, undifferentiated mesenchymal cells associated with branching thin-walled vessels and more mature neoplastic spindle cells with abundant eosinophilic cytoplasm in a collagenous stroma.","definition_xrefs":["NCIT:C7052"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"excluded_subClassOf","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign perivascular tumor","termid":"MONDO:0003342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myofibroma","secondary_identifiers":["EFO:1000389","ICDO:8824/0","ONCOTREE:MF","MEDGEN:220420","UMLS:C1266121","DOID:4386","MESH:D047708"],"synonyms":[{"name":"infantile hemangiopericytoma","type":"related"},{"name":"lipoleiomyoma","type":"exact"},{"name":"myofibroma","type":"exact"},{"name":"myofibroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006312","xrefs":{"Monarch":{"xref_id":"0006312"}}}


id: PBO:0114500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uridine nucleosidase (uridine-cytidine N-ribohydrolase); cleaves N-glycosidic bonds in nucleosides; dual roles in NAD+ biosynthesis and the nucleobase salvage pathway; monomeric structure unique to this class of enzymes","termid":"PBO:0114500"}


id: PR:O60167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yap18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH domain-containing protein C19F8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.03c","synonyms":[{"name":"Spom972h-yap18","type":"exact"}],"termid":"PR:O60167"}


id: MONDO:0006343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the ovary and is characterized by the presence of malignant epithelial cells that resemble malignant urothelial cells. There is no morphologic evidence of a benign or borderline Brenner tumor component present.","definition_xrefs":["NCIT:C5240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian transitional cell carcinoma","secondary_identifiers":["UMLS:C1335184","EFO:1000435","DOID:4000","MEDGEN:233811"],"synonyms":[{"name":"malignant ovarian transitional cell neoplasm","type":"exact"},{"name":"ovarian transitional cell cancer","type":"exact"},{"name":"ovarian transitional cell carcinoma","type":"exact"},{"name":"ovarian transitional cell neoplasm","type":"related"},{"name":"ovary transitional cell carcinoma","type":"exact"},{"name":"transitional cell carcinoma of ovary","type":"exact"},{"name":"transitional cell carcinoma of the ovary","type":"exact"}],"termid":"MONDO:0006343","xrefs":{"Monarch":{"xref_id":"0006343"}}}


id: PBO:0068713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 2, pseudogene","termid":"PBO:0068713"}


id: PBO:0078645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-1","termid":"PBO:0078645"}


id: PBO:0025426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B-55 Pab1","termid":"PBO:0025426"}


id: PBO:0031292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_phenotype","termid":"PBO:0031292"}


id: PBO:0047644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase family member 1C","termid":"PBO:0047644"}


id: PBO:0082842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constitutively expressed DL-glycerol-3-phosphate phosphatase; also known as glycerol-1-phosphatase; involved in glycerol biosynthesis, induced in response to both anaerobic and osmotic stress; GPP1 has a paralog, GPP2, that arose from the whole genome duplication","termid":"PBO:0082842"}


id: PR:Q9UTH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1786.02 gene.","definition_xrefs":["UniProtKB:Q9UTH5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C1786.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.02","synonyms":[{"name":"Spom972h-SPAC1786.02","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH5"}


id: MONDO:0032631
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86025],"is_not":false,"summary":null,"term":"MONDO:0032631"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 27","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748826","GARD:18375","MEDGEN:1648481","OMIM:618248","DOID:0112090"],"synonyms":[{"name":"MC1DN27","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 27","type":"related"}],"termid":"MONDO:0032631","terms_by_termid":{"MONDO:0032631":null},"xrefs":{"Monarch":{"xref_id":"0032631"}}}


id: PBO:0085869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has weak similarity to proteins involved in thiamin metabolism; expression is induced in the absence of thiamin","termid":"PBO:0085869"}


id: PATO:0000248
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000248 pupillary reflex (obsolete PATO:0000248)","termid":"PATO:0000248"}


id: PBO:0005349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S37 (predicted)","termid":"PBO:0005349"}


id: FYPO:0004007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to menadione is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to menadione","synonyms":[{"name":"decreased protein accumulation during cellular response to menadione","type":"related"},{"name":"decreased protein level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to menadione during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to menadione","type":"exact"}],"termid":"FYPO:0004007"}


id: PBO:0018035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium ion transmembrane transporter (predicted)","termid":"PBO:0018035"}


id: PBO:0004883
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as cwc27 in error","termid":"PBO:0004883"}


id: GO:0046328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"JNK cascade","termid":"GO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of JNK cascade","synonyms":[{"name":"regulation of SAPK cascade","type":"broad"}],"termid":"GO:0046328"}


id: GO:0140055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H4 acetylated at lysine 8.","definition_xrefs":["PMID:17996705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 reader activity","termid":"GO:0140008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0140566","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"histone H4K8ac reader activity","synonyms":[{"name":"H4K8ac modified histone binding","type":"narrow"}],"termid":"GO:0140055"}


id: MONDO:0000140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000140 (obsolete MONDO:0000140)","termid":"MONDO:0000140","xrefs":{"Monarch":{"xref_id":"0000140"}}}


id: GO:0031680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The heterodimer formed by the beta and gamma subunits of a heterotrimeric G protein, which dissociates from the alpha subunit upon guanine nuclotide exchange.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"G-protein beta/gamma-subunit complex","synonyms":[{"name":"G-beta/G-gamma complex","type":"exact"},{"name":"heterotrimeric G-protein GTPase, beta-subunit","type":"narrow"}],"termid":"GO:0031680"}


id: PBO:0049023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein nmb","termid":"PBO:0049023"}


id: MONDO:0018923
data:
  {"annotated_genes":["SJAG_02317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008644"}]},"cv_name":"mondo","definition":"22q11.2 deletion syndrome (DS) is a chromosomal anomaly which causes a congenital malformation disorder whose common features include cardiac defects, palatal anomalies, facial dysmorphism, developmental delay and immune deficiency.","definition_xrefs":["Orphanet:567"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic anorectal malformation (obsolete MONDO:0015246)","termid":"MONDO:0015246"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"chromosome 22q deletion","termid":"MONDO:0022760"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002320","MONDO:0005267"],"is_obsolete":false,"name":"22q11.2 deletion syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10299","MedDRA:10066430","DECIPHER:16","icd11.foundation:1868156761","NANDO:1200688","NANDO:1200339","MedDRA:10012979","NANDO:2200712"],"synonyms":[{"name":"22q11DS","type":"exact"},{"name":"Cayler cardiofacial syndrome","type":"exact"},{"name":"DiGeorge sequence","type":"narrow"},{"name":"DiGeorge syndrome","type":"narrow"},{"name":"Sedlackova syndrome","type":"exact"},{"name":"Shprintzen syndrome","type":"exact"},{"name":"Takao syndrome","type":"exact"},{"name":"VCFS","type":"related"},{"name":"catch 22","type":"exact"},{"name":"conotruncal anomaly face syndrome","type":"exact"},{"name":"microdeletion 22q11.2","type":"exact"},{"name":"monosomy 22q11","type":"exact"},{"name":"velocardiofacial syndrome","type":"related"}],"termid":"MONDO:0018923","terms_by_termid":{"MONDO:0008644":null},"xrefs":{"Monarch":{"xref_id":"0018923"}}}


id: PBO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expressed with adjacent tandem gene","termid":"PBO:0002024"}


id: GO:0071460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cell-matrix adhesion.","definition_xrefs":["GOC:sl","PMID:11425869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cell-matrix adhesion","termid":"GO:0071460"}


id: PBO:0030161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phosphatidylinositol_level","termid":"PBO:0030161"}


id: PBO:0041070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3 pseudogene 3","termid":"PBO:0041070"}


id: FYPO:0001773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a tRNA methyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abolished tRNA methyltransferase activity","synonyms":[{"name":"tRNA methyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0001773"}


id: PBO:0002794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L25 (predicted)","termid":"PBO:0002794"}


id: FYECO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which nocodazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ nocodazole","termid":"FYECO:0000222"}


id: GO:0005373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transporter of heavy metal ions that utilizes a carrier-mediated process to catalyze uniport, symport or antiport between aqueous phases on either side of a lipid membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion porter activity (obsolete GO:0005373)","synonyms":[{"name":"heavy metal ion porter activity","type":"exact"},{"name":"metal ion transporter","type":"broad"}],"termid":"GO:0005373"}


id: PBO:0091827
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid Transfer at Contact site","termid":"PBO:0091827"}


id: GO:0072441
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102144],"is_not":false,"summary":null,"term":"GO:0072441"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of meiotic DNA replication checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to meiotic cell cycle checkpoint signaling","termid":"GO:0072410"},{"relation_name":"is_a","term_name":"response to DNA replication checkpoint signaling","termid":"GO:0072438"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to meiotic DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic DNA replication checkpoint effector process","type":"exact"},{"name":"response to signal involved in meiotic DNA replication checkpoint","type":"exact"}],"termid":"GO:0072441","terms_by_termid":{"GO:0072441":null}}


id: GO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of palymitoyl groups from a lipoprotein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"},{"relation_name":"is_a","term_name":"lipoprotein catabolic process","termid":"GO:0042159"},{"relation_name":"is_a","term_name":"macromolecule depalmitoylation","termid":"GO:0098734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein depalmitoylation","termid":"GO:0002084"}


id: PATO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001112 energy value (obsolete PATO:0001112)","termid":"PATO:0001112"}


id: PBO:0054841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2255","termid":"PBO:0054841"}


id: GO:0030518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a steroid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone receptor signaling pathway","termid":"GO:0043401"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nuclear receptor-mediated steroid hormone signaling pathway","synonyms":[{"name":"intracellular steroid hormone receptor signaling pathway","type":"exact"},{"name":"steroid hormone receptor signaling pathway","type":"broad"},{"name":"steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0030518"}


id: PBO:0050465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HORMA domain containing 2","termid":"PBO:0050465"}


id: PBO:0067645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 819, pseudogene","termid":"PBO:0067645"}


id: GO:1901622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smoothened signaling pathway","termid":"GO:0045880"},{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:1901620"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"activation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901622"}


id: PBO:0051607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 31 receptor A","termid":"PBO:0051607"}


id: GO:0010378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the circadian clock maintains robust and accurate timing over a broad range of physiological temperatures. The circadian clock is an endogenous 24-h timer found in most eukaryotes and in photosynthetic bacteria. The clock drives rhythms in the physiology, biochemistry, and metabolism of the organisms.","definition_xrefs":["PMID:16617099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"temperature compensation of the circadian clock","synonyms":[{"name":"regulation of the circadian clock by temperature","type":"related"}],"termid":"GO:0010378"}


id: PBO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase deficiency with cataracts","termid":"PBO:0004971"}


id: GO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a Purkinje myocyte to a ventricular cardiac muscle cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Purkinje myocyte to ventricular cardiac muscle cell signaling","synonyms":[{"name":"Purkinje myocyte to ventricular cardiac muscle cell signalling","type":"exact"}],"termid":"GO:0086029"}


id: PBO:0087330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin; involved in the retrieval of late-Golgi SNAREs from the post-Golgi endosome to the trans-Golgi network; interacts with Snx4p","termid":"PBO:0087330"}


id: GO:0070164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of adiponectin from a cell.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of adiponectin secretion","termid":"GO:0070163"},{"relation_name":"negatively_regulates","term_name":"adiponectin secretion","termid":"GO:0070162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of adiponectin secretion","synonyms":[{"name":"down regulation of adiponectin secretion","type":"exact"},{"name":"down-regulation of adiponectin secretion","type":"exact"},{"name":"downregulation of adiponectin secretion","type":"exact"},{"name":"inhibition of adiponectin secretion","type":"narrow"}],"termid":"GO:0070164"}


id: GO:0150038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of molecules (e.g. neuropeptides, insulin-related peptides or neuromodulators such as serotonin and dopamine) contained within a postsynaptic dense core vesicle by fusion of the granule with the plasma membrane of the postsynapse in response to increased cytosolic calcium levels.","definition_xrefs":["PMID:19448629","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"},{"relation_name":"is_a","term_name":"neuronal dense core vesicle exocytosis","termid":"GO:0099011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"postsynaptic dense core vesicle exocytosis","termid":"GO:0150038"}


id: PBO:0002917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Gas5, 1,3-beta-glucanosyltransferase (predicted)","termid":"PBO:0002917"}


id: PBO:0069323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 581, pseudogene","termid":"PBO:0069323"}


id: PBO:0117055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARS2 antisense RNA 1","termid":"PBO:0117055"}


id: PBO:0044249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWC15 spliceosome associated protein homolog","termid":"PBO:0044249"}


id: GO:0062238
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA-binding ribonucleoprotein complex that contains a lncRNA complementary to the bound chromosomal locus and is involved in the tethering homologous chromosomes together during chromosome pairing at meiotic prophase I.","definition_xrefs":["PMID:22582262","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"Smp focus","synonyms":[{"name":"Smp dot","type":"exact"}],"termid":"GO:0062238"}


id: MONDO:0015266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete brucellosis (obsolete MONDO:0015266)","termid":"MONDO:0015266","xrefs":{"Monarch":{"xref_id":"0015266"}}}


id: PBO:0039562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 54 pseudogene 1","termid":"PBO:0039562"}


id: GO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C4b product of the classical complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"},{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement component C4b receptor activity","termid":"GO:0001861"}


id: MONDO:0021150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic characteristic (obsolete MONDO:0021150)","termid":"MONDO:0021150","xrefs":{"Monarch":{"xref_id":"0021150"}}}


id: GO:0052183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a host organism destabilizes a cellular component of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption of symbiont cellular component (obsolete GO:0052183)","synonyms":[{"name":"degradation of symbiont cellular component by organism","type":"related"},{"name":"disassembly by host of symbiont cellular component","type":"narrow"},{"name":"disruption by host of symbiont cellular component","type":"related"},{"name":"disruption by host of symbiont structure","type":"exact"},{"name":"modification by host of symbiont cellular component","type":"exact"},{"name":"modification by host of symbiont structure","type":"broad"},{"name":"perturbation of symbiont cellular component","type":"exact"}],"termid":"GO:0052183"}


id: PBO:0088691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF/Mak21 family Noc4","termid":"PBO:0088691"}


id: MONDO:0003515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma that arises from the fallopian tube. It is a rare tumor, often found incidentally.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"},{"relation_name":"is_a","term_name":"fallopian tube germ cell tumor","termid":"MONDO:0003392"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube teratoma","secondary_identifiers":["DOID:5564","NCIT:C40131","UMLS:C1517127","MEDGEN:309129"],"synonyms":[{"name":"fallopian tube teratoma","type":"exact"}],"termid":"MONDO:0003515","xrefs":{"Monarch":{"xref_id":"0003515"}}}


id: MONDO:0003377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from an extrahepatic bile duct. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"},{"relation_name":"is_a","term_name":"liver leiomyosarcoma","termid":"MONDO:0003378"},{"relation_name":"is_a","term_name":"extrahepatic bile duct sarcoma","termid":"MONDO:0024658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"extrahepatic bile duct leiomyosarcoma","secondary_identifiers":["DOID:5293","MEDGEN:232481","UMLS:C1333508"],"synonyms":[{"name":"bile duct leiomyosarcoma","type":"exact"},{"name":"extrahepatic bile duct leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of bile duct","type":"exact"},{"name":"leiomyosarcoma of extrahepatic bile duct","type":"exact"},{"name":"leiomyosarcoma of the bile duct","type":"exact"},{"name":"leiomyosarcoma of the extrahepatic bile duct","type":"exact"}],"termid":"MONDO:0003377","xrefs":{"Monarch":{"xref_id":"0003377"}}}


id: PR:Q10072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H1.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C3H1.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.06c","synonyms":[{"name":"Spom972h-SPAC3H1.06c","type":"exact"}],"termid":"PR:Q10072"}


id: PBO:0066759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 57","termid":"PBO:0066759"}


id: PBO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 9","termid":"PBO:0046848"}


id: GO:0100043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular response to alkaline pH.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to alkaline pH by transcription from RNA polymerase II promoter (obsolete GO:0100043)","termid":"GO:0100043"}


id: GO:0035025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rho protein signal transduction","termid":"GO:0035023"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Rho protein signal transduction","synonyms":[{"name":"activation of Rho protein signal transduction","type":"narrow"},{"name":"stimulation of Rho protein signal transduction","type":"narrow"},{"name":"up regulation of Rho protein signal transduction","type":"exact"},{"name":"up-regulation of Rho protein signal transduction","type":"exact"},{"name":"upregulation of Rho protein signal transduction","type":"exact"}],"termid":"GO:0035025"}


id: PBO:0081529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 439","termid":"PBO:0081529"}


id: FYPO:0003100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is normal (i.e. indistinguishable from wild type) in regions containing protein-coding genes. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PMID:24095277","GO:0031507","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal heterochromatin assembly","termid":"FYPO:0003099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal heterochromatin assembly at protein coding gene","synonyms":[{"name":"normal heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"normal heterochromatin assembly at protein-coding gene","type":"exact"},{"name":"normal heterochromatin formation at protein coding gene","type":"exact"}],"termid":"FYPO:0003100"}


id: PBO:0069378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 638, pseudogene","termid":"PBO:0069378"}


id: PBO:0044570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger B","termid":"PBO:0044570"}


id: PBO:0031855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-haplosufficient","termid":"PBO:0031855"}


id: PBO:0053579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 602","termid":"PBO:0053579"}


id: PBO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Obg-Like ATPase (predicted)","termid":"PBO:0002320"}


id: MONDO:0017447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Congenital absence/hypoplasia of thumb is a rare developmental defect during embryogenesis characterized by underdevelopment of the thumb, ranging from a slight decrease in thumb size to complete absence of the thumb. The malformation may occur isolated, combined to other defects of the hand or upper limb, or as part of a multiple congenital anomaly syndrome.","definition_xrefs":["Orphanet:294988"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital absence/hypoplasia of thumb (obsolete MONDO:0017447)","synonyms":[{"name":"thumb hypodactyly","type":"exact"},{"name":"thumb oligodactyly","type":"exact"}],"termid":"MONDO:0017447","xrefs":{"Monarch":{"xref_id":"0017447"}}}


id: MONDO:0014009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive congenital ichthyosis characterized by fine whitish scales, moderate to severe erythroderma, compact hyperkeratosis, hypergranulosis, acanthosis, and papillomatosis that has material basis in variation in the chromosome region 12p11.2-q13.1.","definition_xrefs":["DOID:0060716","PMID:16117785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital non-bullous ichthyosiform erythroderma","termid":"MONDO:0019306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 7","secondary_identifiers":["UMLS:C3554348","OMIM:615022","MEDGEN:767262","GARD:15895"],"synonyms":[{"name":"ARCI7","type":"exact"},{"name":"autosomal recessive congenital ichthyosis type 7","type":"exact"},{"name":"ichthyosis, congenital, autosomal recessive 7","type":"related"}],"termid":"MONDO:0014009","xrefs":{"Monarch":{"xref_id":"0014009"}}}


id: PBO:0077710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin T3, fast skeletal type","termid":"PBO:0077710"}


id: PBO:0066649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor 3","termid":"PBO:0066649"}


id: PBO:0078240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 21-1 (pseudogene)","termid":"PBO:0078240"}


id: FYPO:0002688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short mitotic spindle assembles, but does not elongate. The spindle pole bodies fail to separate, and often become spatially closer together, suggesting that the spindle shrinks.","definition_xrefs":["PMID:23885124","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished mitotic spindle elongation during prophase","termid":"FYPO:0006173"},{"relation_name":"is_a","term_name":"abolished mitotic spindle elongation during prophase","termid":"FYPO:0006173"},{"relation_name":"is_a","term_name":"mitotic spindle collapse","termid":"FYPO:0006475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000337","FYPO:0000641","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mitotic spindle collapse without elongation during prophase","synonyms":[{"name":"SPB convergence","type":"exact"},{"name":"broken mitotic spindle without elongation during prophase","type":"related"},{"name":"mitotic spindle breakage without elongation during prophase","type":"related"},{"name":"mitotic spindle collapse without elongation during prophase during vegetative growth","type":"exact"},{"name":"spindle collapse without elongation during mitotic prophase","type":"exact"},{"name":"spindle collapse without elongation during prophase during mitotic cell cycle","type":"related"},{"name":"spindle pole body convergence","type":"exact"}],"termid":"FYPO:0002688"}


id: MONDO:0008985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia with transposition of ciliary microtubules","secondary_identifiers":["MEDGEN:388736","MESH:C567137","OMIM:215520","UMLS:C2673817","GARD:1361"],"synonyms":[{"name":"ciliary dyskinesia with transposition of ciliary microtubules","type":"exact"},{"name":"ciliary dyskinesia, due to transposition of ciliary microtubules","type":"related"}],"termid":"MONDO:0008985","xrefs":{"Monarch":{"xref_id":"0008985"}}}


id: PATO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces west.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right","termid":"PATO:0000367"}


id: PBO:0043369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin associated protein 1","termid":"PBO:0043369"}


id: MONDO:0001428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pylorospasm","secondary_identifiers":["UMLS:C0152163","ICD9:537.81","DOID:12072","SCTID:335002","MEDGEN:508908"],"termid":"MONDO:0001428","xrefs":{"Monarch":{"xref_id":"0001428"}}}


id: PATO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"male fertility","termid":"PATO:0000279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male semi-sterile","termid":"PATO:0001762"}


id: MONDO:0060456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral sclerosis, diffuse, scholz type","secondary_identifiers":["MESH:C564449","UMLS:C1844884","OMIM:302700","MEDGEN:335049"],"synonyms":[{"name":"cerebral sclerosis, diffuse, scholz type","type":"exact"}],"termid":"MONDO:0060456","xrefs":{"Monarch":{"xref_id":"0060456"}}}


id: MONDO:0044924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloid leukemia with mutated CEBPA (obsolete MONDO:0044924)","termid":"MONDO:0044924","xrefs":{"Monarch":{"xref_id":"0044924"}}}


id: PBO:0063461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor C","termid":"PBO:0063461"}


id: MONDO:0850267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute megakaryocytic leukemia that is characterized by fusion oncogenes involving transcriptional regulators in childhood.","definition_xrefs":["DOID:0080794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute megakaryoblastic leukemia","termid":"MONDO:0018872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"childhood acute megakaryoblastic leukemia","secondary_identifiers":["NCIT:C7972","UMLS:C0279650","MEDGEN:79023"],"termid":"MONDO:0850267","xrefs":{"Monarch":{"xref_id":"0850267"}}}


id: PBO:0061268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA1 divergent transcript","termid":"PBO:0061268"}


id: GO:0043668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer layer of the pollen grain wall which is composed primarily of sporopollenin.","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pollen wall","termid":"GO:0043667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"exine","termid":"GO:0043668"}


id: GO:0010842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia.","definition_xrefs":["GOC:tb","PMID:1270266","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina layer formation","synonyms":[{"name":"retinal lamination","type":"exact"},{"name":"retinal layer formation","type":"exact"}],"termid":"GO:0010842"}


id: SO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide region (usually a palindrome) that is recognized by a restriction enzyme. This may or may not be equal to the restriction enzyme binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_region","termid":"SO:0001954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_recognition_site","synonyms":[{"name":"restriction endonuclease recognition site","type":"exact"},{"name":"restriction enzyme recognition site","type":"exact"}],"termid":"SO:0001687"}


id: PBO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPM2A divergent transcript","termid":"PBO:0046438"}


id: SO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A retrotransposon flanked by long terminal repeat sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon","termid":"SO:0000180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_retrotransposon","synonyms":[{"name":"LTR retrotransposon","type":"exact"},{"name":"long terminal repeat retrotransposon","type":"exact"}],"termid":"SO:0000186"}


id: PBO:0053468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 431","termid":"PBO:0053468"}


id: PBO:0050252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 30","termid":"PBO:0050252"}


id: GO:0035023
data:
  {"annotated_genes":["SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0035023","terms_by_termid":{"GO:0035024":null}}


id: MONDO:0014024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 43 is a rare, complex hereditary spastic paraplegia characterized by a childhood to adolescent onset of progressive lower limb spasticity, associated with mild to severe gait disturbances, extensor plantar responses, muscle weakness and severe distal atrophy, frequently with upper limb involvement. Additional features may include joint contractures, distal sensory loss and brisk or absent deep tendon reflexes. Other signs, such as depression, memory loss, optic atrophy (with vision loss) and brain iron deposition (revealed by brain imagery), have also been reported.","definition_xrefs":["Orphanet:320370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 43","secondary_identifiers":["UMLS:C2680446","DOID:0110795","MEDGEN:760531","OMIM:615043","GARD:17473","SCTID:764736001"],"synonyms":[{"name":"C19orf12 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG43","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in C19orf12","type":"exact"},{"name":"autosomal recessive spastic paraplegia 43","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 43","type":"exact"},{"name":"hereditary spastic paraplegia type 43","type":"exact"},{"name":"spastic paraplegia 43, autosomal recessive","type":"related"}],"termid":"MONDO:0014024","xrefs":{"Monarch":{"xref_id":"0014024"}}}


id: PBO:0091578
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bioneer strain is only N-terminal deleted","termid":"PBO:0091578"}


id: GO:0090709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plant organ formation at a consistent predetermined time point during development.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of plant organ formation","termid":"GO:0090709"}


id: MONDO:0016602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Citrin deficiency is a rare autosomal recessive urea cycle defect characterized clinically by recurring episodes of hyperammonemia and associated neuropsychiatric symptoms in the adult-onset form (citrullinemia type II), and by transient cholestasis and variable hepatic dysfunction in the neonatal form (neonatal intrahepatic cholestasis due to citrin deficiency).","definition_xrefs":["Orphanet:247582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrullinemia","termid":"MONDO:0015991"},{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"citrin deficiency","secondary_identifiers":["SCTID:429735007","UMLS:C1997910","NANDO:2200483","GARD:20661","icd11.foundation:348535193","MEDGEN:372684","NANDO:1200978"],"synonyms":[{"name":"citrin deficiency","type":"exact"}],"termid":"MONDO:0016602","xrefs":{"Monarch":{"xref_id":"0016602"}}}


id: PBO:0029386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_at_Thr-Pro_site_during_cellular_response_to_hydroxyurea","termid":"PBO:0029386"}


id: GO:0030080
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that surrounds and transfers excitation energy directly to the bacterial reaction center; binds bacteriochlorophyll a and has a single absorption band between 870 and 890 nm.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"light-harvesting complex, core complex","termid":"GO:0030078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"B875 antenna complex","synonyms":[{"name":"LH1 complex","type":"exact"},{"name":"light harvesting complex I","type":"exact"}],"termid":"GO:0030080"}


id: PBO:0081977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 4","termid":"PBO:0081977"}


id: MONDO:0035160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive myoclonic epilepsy with neuroserpin inclusion bodies (obsolete MONDO:0035160)","termid":"MONDO:0035160","xrefs":{"Monarch":{"xref_id":"0035160"}}}


id: PBO:0088668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial polynucleotide adenylyltransferase Atp25","termid":"PBO:0088668"}


id: GO:1902005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline biosynthetic process.","definition_xrefs":["PMID:23415322","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"proline biosynthetic process","termid":"GO:0006561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"regulation of proline biosynthetic process","synonyms":[{"name":"regulation of proline anabolism","type":"exact"},{"name":"regulation of proline biosynthesis","type":"exact"},{"name":"regulation of proline formation","type":"exact"},{"name":"regulation of proline synthesis","type":"exact"}],"termid":"GO:1902005"}


id: GO:0098992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense core vesicle (granule) that is part of a neuron. These vesicles typically contain neuropeptides. They can be found in all parts of neurons, including the soma, dendrites, axonal swellings (varicosities) and synaptic terminals.","definition_xrefs":["ISBN:978-0-07-181001-2","GOC:dos","Wikipedia:Neuropeptide&oldid=713905176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"neuronal dense core vesicle","termid":"GO:0098992"}


id: PBO:0076062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"storkhead box 2","termid":"PBO:0076062"}


id: PBO:0075270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 23","termid":"PBO:0075270"}


id: PBO:0078064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 54","termid":"PBO:0078064"}


id: PBO:0116996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GZMH and GMZB antisense RNA 1","termid":"PBO:0116996"}


id: PBO:0073816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A17 antisense RNA 1","termid":"PBO:0073816"}


id: GO:0035913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ventral aorta are generated and organized. The ventral aorta is a blood vessel in a single-pass circulatory system that carries de-oxygenated blood from the heart to the gills. In a single-pass circulatory system blood passes once through the heart to supply the body once.","definition_xrefs":["ZFA:0000604","Wikipedia:Aorta","GOC:bf","GOC:dgh","UBERON:0003085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta morphogenesis","termid":"GO:0035909"},{"relation_name":"part_of","term_name":"ventral aorta development","termid":"GO:0035908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral aorta morphogenesis","termid":"GO:0035913"}


id: PBO:0091907
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a disordered region N-terminal to the YTH domain stabilizes RNA binding, and becomes more ordered upon binding","termid":"PBO:0091907"}


id: PBO:0065723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWP2 small subunit processome component","termid":"PBO:0065723"}


id: MONDO:0003062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"intestinal neoplasm","termid":"MONDO:0021118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal benign neoplasm","secondary_identifiers":["MEDGEN:91124","NCIT:C4609","UMLS:C0347269","SCTID:92151003"],"synonyms":[{"name":"benign intestinal neoplasm","type":"exact"},{"name":"benign intestinal neoplasms","type":"exact"},{"name":"benign intestinal tumor","type":"exact"},{"name":"benign intestinal tumors","type":"exact"},{"name":"benign intestinal tumour","type":"exact"},{"name":"benign intestinal tumours","type":"exact"},{"name":"benign intestine neoplasm","type":"exact"},{"name":"benign intestine tumor","type":"exact"},{"name":"benign intestine tumour","type":"exact"},{"name":"benign neoplasm of intestines","type":"exact"},{"name":"benign neoplasm of the intestines","type":"exact"},{"name":"benign neoplasms of large and/or small intestine","type":"exact"},{"name":"benign neoplasms of the large and/or small intestine","type":"exact"},{"name":"benign tumor of intestines","type":"exact"},{"name":"benign tumor of the intestines","type":"exact"},{"name":"benign tumour of intestines","type":"exact"},{"name":"benign tumour of the intestines","type":"exact"},{"name":"intestinal neoplasms, benign","type":"exact"},{"name":"intestinal tumors, benign","type":"exact"},{"name":"intestine benign neoplasm","type":"exact"}],"termid":"MONDO:0003062","xrefs":{"Monarch":{"xref_id":"0003062"}}}


id: PBO:0079225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 3 pseudogene 1","termid":"PBO:0079225"}


id: GO:0031835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a substance P receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurokinin receptor binding","termid":"GO:0031834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"substance P receptor binding","synonyms":[{"name":"neurokinin-1 receptor binding","type":"exact"},{"name":"substance P receptor ligand","type":"narrow"}],"termid":"GO:0031835"}


id: PBO:0086571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPR053C is not an essential gene; partially overlaps verified ORF NHP6A/YPR052C","termid":"PBO:0086571"}


id: PBO:0017646
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although this is demonstrated to be DNA polymerase epsilon interactor and named Dpb3, it appears to be the ortholog of S. cerevisie BUR6 and human DRAP1. The Dpb3 ortholog appears to be the recently identified SPCC16C4.22 date=20120829","termid":"PBO:0017646"}


id: PBO:0051758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 4","termid":"PBO:0051758"}


id: PR:P40900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process protein isp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.02c","synonyms":[{"name":"Spom972h-isp4","type":"exact"}],"termid":"PR:P40900"}


id: GO:0015141
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of succinate, the dianion of ethane dicarboxylic acid, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"succinate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"}],"termid":"GO:0015141","terms_by_termid":{"GO:0097434":null}}


id: FYPO:0006154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more pheromone response mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Pheromone response genes are normally transcribed in response to a pheromone stimulus.","definition_xrefs":["PMID:22900017","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of pheromone response gene mRNA during vegetative growth","synonyms":[{"name":"increased level of pheromone response gene RNA during vegetative growth","type":"exact"},{"name":"increased level of pheromone response gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of pheromone response gene transcripts during vegetative growth","type":"exact"},{"name":"increased pheromone response gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006154"}


id: FYPO:0001423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein targeting to the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vacuolar transport","termid":"FYPO:0000601"},{"relation_name":"is_a","term_name":"normal protein localization to vacuole","termid":"FYPO:0007058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein targeting to vacuole","synonyms":[{"name":"normal protein targeting to vacuole during mitotic cell cycle","type":"related"},{"name":"normal protein targeting to vacuole during vegetative growth","type":"exact"},{"name":"normal vacuolar protein sorting","type":"exact"}],"termid":"FYPO:0001423"}


id: GO:0000466
data:
  {"annotated_genes":["SJAG_02993","SJAG_00854","SJAG_01623","SJAG_04818","SJAG_01581","SJAG_04321","SJAG_03745","SJAG_04824","SJAG_01521","SJAG_00955","SJAG_03789","SJAG_02547","SJAG_00081","SJAG_04289","SJAG_01551","SJAG_03952","SJAG_04153","SJAG_03425","SJAG_03796","SJAG_02275","SJAG_00897","SJAG_02644","SJAG_00722","SJAG_04492","SJAG_04084","SJAG_02250","SJAG_04524","SJAG_01818","SJAG_04369","SJAG_02374","SJAG_01191","SJAG_04582","SJAG_00882","SJAG_00772","SJAG_03179","SJAG_02553","SJAG_03234","SJAG_02830","SJAG_04174","SJAG_00965","SJAG_04916","SJAG_04006","SJAG_06613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61524,63129,77992,78412,97733],"is_not":false,"summary":null,"term":"GO:0000466"},{"annotations":[94718,71122,103868,91459],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[78049,113232,71588,104531,74314,105420,105419,102878,70985,70120,96546,108756,115049,115137,118332,104314,94468,96254,72777],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[71018,71382,89739,115184,107205,97000,70468,77312,98699,74872,79176,106221,101833,72186,115625],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000467"},{"annotations":[107206],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5.8S rRNA","termid":"GO:0000460"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00722":null,"SJAG_00772":null,"SJAG_00854":null,"SJAG_00882":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_01818":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02830":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04289":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0000466","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000465":null,"GO:0000466":null,"GO:0000467":null}}


id: GO:0031671
data:
  {"annotated_genes":["SJAG_04776","SJAG_02222","SJAG_03048","SJAG_04666","SJAG_04597","SJAG_02916"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105868,114124],"is_not":false,"summary":null,"term":"GO:0031671"},{"annotations":[102123],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[87298,92183,94175],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a primary cell septum following nuclear division.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"},{"relation_name":"part_of","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02222":null,"SJAG_02916":null,"SJAG_03048":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000281","GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031671","terms_by_termid":{"GO:0031671":null,"GO:1905757":null,"GO:1905758":null}}


id: PBO:0056762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15 pseudogene 1","termid":"PBO:0056762"}


id: PBO:0054984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2398","termid":"PBO:0054984"}


id: MONDO:1012100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic uremic syndrome, non-human animal","termid":"MONDO:1011906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic uremic syndrome, dog","secondary_identifiers":["OMIA:000435-9615"],"termid":"MONDO:1012100","xrefs":{"Monarch":{"xref_id":"1012100"}}}


id: FYPO:0007747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the length of the meiotic spindle is normal (i.e. indistinguishable from wild type) during prophase I.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal spindle","termid":"FYPO:0004568"},{"relation_name":"part_of","term_name":"normal spindle during meiosis I","termid":"FYPO:0004569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic spindle length during prophase I","synonyms":[{"name":"normal spindle length during meiotic prophase I","type":"exact"},{"name":"normal spindle length during prophase of meiosis I","type":"exact"}],"termid":"FYPO:0007747"}


id: PBO:0084873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; MRP17 exhibits genetic interactions with PET122, encoding a COX3-specific translational activator","termid":"PBO:0084873"}


id: PBO:0057567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 762","termid":"PBO:0057567"}


id: PBO:0077105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMM9 pseudogene 3","termid":"PBO:0077105"}


id: RO:0002596
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between c and p if and only if c is capable of some activity a, and a regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_regulating","termid":"RO:0002596"}


id: PBO:0065043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 2","termid":"PBO:0065043"}


id: GO:0045735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Functions in the storage of nutritious substrates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"nutrient reservoir activity","synonyms":[{"name":"storage protein","type":"related"},{"name":"storage protein of fat body","type":"related"},{"name":"yolk protein","type":"related"}],"termid":"GO:0045735"}


id: MOD:01731
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01731"}


id: PBO:0043969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta like 2, pseudogene","termid":"PBO:0043969"}


id: MONDO:0003626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare serous adenocarcinoma that arises from the uterine ligament.","definition_xrefs":["NCIT:C40136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine ligament adenocarcinoma","termid":"MONDO:0002741"},{"relation_name":"is_a","term_name":"cervical serous adenocarcinoma","termid":"MONDO:0003631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament serous adenocarcinoma","secondary_identifiers":["DOID:5747","MEDGEN:275561","UMLS:C1519872"],"synonyms":[{"name":"uterine ligament serous adenocarcinoma","type":"exact"}],"termid":"MONDO:0003626","xrefs":{"Monarch":{"xref_id":"0003626"}}}


id: PBO:0073804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 10, pseudogene","termid":"PBO:0073804"}


id: PBO:0057471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 589","termid":"PBO:0057471"}


id: PBO:0047934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, rare, fra(12)(q24.2)","termid":"PBO:0047934"}


id: GO:0016486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of a mature peptide hormone by posttranslational processing of a prohormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"peptide hormone processing","secondary_identifiers":["Reactome:R-HSA-400508","Reactome:R-HSA-422085","Reactome:R-HSA-209952"],"termid":"GO:0016486"}


id: GO:0043604
data:
  {"annotated_genes":["SJAG_00427","SJAG_04549","SJAG_00982","SJAG_01935","SJAG_02085","SJAG_03731","SJAG_04178","SJAG_01019","SJAG_05277","SJAG_04627","SJAG_00866","SJAG_02305","SJAG_02741","SJAG_00815","SJAG_02408","SJAG_00106","SJAG_04007","SJAG_03064","SJAG_03275","SJAG_01219","SJAG_00412","SJAG_01402","SJAG_02225","SJAG_03398","SJAG_01351","SJAG_04031","SJAG_03494","SJAG_00392","SJAG_03310","SJAG_00035","SJAG_01139","SJAG_02769","SJAG_00469","SJAG_00988","SJAG_03313","SJAG_01461","SJAG_03290","SJAG_02158","SJAG_04288","SJAG_03679","SJAG_02006","SJAG_02842","SJAG_00673","SJAG_04516","SJAG_00792","SJAG_00635","SJAG_01126","SJAG_04577","SJAG_04156","SJAG_05200","SJAG_04032","SJAG_01057","SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93025,98133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[91202,68377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[116791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[76008,79177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[73959,78850,108573,76657,77781,78690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[89135,70890,71085,79746,78360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[93865,93872,105157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[68745,108100,112160,105843,57114,60606,104546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[57741,108188,78428,77104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[101915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[107227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[65846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[93820],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[72031,77323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[93079,70629,96773,108189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046938"},{"annotations":[87618,72565,87189,73189,74408,78815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[74905],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[110830,92223,57759,70190,103200,97925,106276,118129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000050"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_00106":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00427":null,"SJAG_00469":null,"SJAG_00635":null,"SJAG_00673":null,"SJAG_00792":null,"SJAG_00815":null,"SJAG_00866":null,"SJAG_00982":null,"SJAG_00988":null,"SJAG_01019":null,"SJAG_01057":null,"SJAG_01126":null,"SJAG_01139":null,"SJAG_01219":null,"SJAG_01351":null,"SJAG_01402":null,"SJAG_01461":null,"SJAG_01935":null,"SJAG_02006":null,"SJAG_02085":null,"SJAG_02158":null,"SJAG_02225":null,"SJAG_02305":null,"SJAG_02408":null,"SJAG_02599":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_02842":null,"SJAG_03064":null,"SJAG_03275":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03313":null,"SJAG_03398":null,"SJAG_03494":null,"SJAG_03679":null,"SJAG_03731":null,"SJAG_04007":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04156":null,"SJAG_04178":null,"SJAG_04288":null,"SJAG_04516":null,"SJAG_04549":null,"SJAG_04577":null,"SJAG_04627":null,"SJAG_05200":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:0043604","terms_by_termid":{"GO:0000050":null,"GO:0006085":null,"GO:0006086":null,"GO:0006750":null,"GO:0009102":null,"GO:0010510":null,"GO:0015937":null,"GO:0015940":null,"GO:0019427":null,"GO:0031169":null,"GO:0035338":null,"GO:0046513":null,"GO:0046656":null,"GO:0046938":null,"GO:0070981":null,"GO:1905569":null,"GO:1990181":null,"GO:2001295":null}}


id: MONDO:0015275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Partial atrioventricular canal (PAVC) is a congenital heart malformation characterized by an atrial septal defect (ASD; ostium primum), clefts of mitral and occasionally tricuspid valves, two separate atrioventricular (AV) valve annuli and an intact ventricular septum. The typical symptoms of PAVC are impaired exercise capacity and exertional dyspnea.","definition_xrefs":["Orphanet:1330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrioventricular septal defect","termid":"MONDO:0020290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"partial atrioventricular canal","secondary_identifiers":["MEDGEN:868879","MESH:C536112","NANDO:2200268","SCTID:718216009","UMLS:C4023290","GARD:4229"],"synonyms":[{"name":"PAVC","type":"exact"},{"name":"partial AVSD","type":"related"},{"name":"partial atrioventricular canal defect","type":"exact"},{"name":"partial atrioventricular septal defects","type":"related"},{"name":"partial common atrioventricular canal","type":"related"}],"termid":"MONDO:0015275","xrefs":{"Monarch":{"xref_id":"0015275"}}}


id: MONDO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ring staphyloma","secondary_identifiers":["icd11.foundation:7248227","UMLS:C0155363","MEDGEN:509937","ICD9:379.15","DOID:11594","SCTID:5299007"],"termid":"MONDO:0001320","xrefs":{"Monarch":{"xref_id":"0001320"}}}


id: PBO:0081367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 205","termid":"PBO:0081367"}


id: PBO:0058283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4659b","termid":"PBO:0058283"}


id: PR:000044737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at position 5 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PMID:28367989","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S5)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"S5P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:3","type":"exact"},{"name":"rpb1/Phos(CTD-S5)","type":"exact"}],"termid":"PR:000044737"}


id: MOD:01108
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid, glutamtic acid anisole adduct.","definition_xrefs":["DeltaMass:259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"anisyl modified residue","termid":"MOD:01007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid (Glu)","synonyms":[{"name":"anisole adducted glutamyl","type":"exact"}],"termid":"MOD:01108"}


id: PR:O14333
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylserine decarboxylase proenzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03068","PANTHER:PTHR10067:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase proenzyme 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.18","secondary_identifiers":["UniProtKB:O14333"],"synonyms":[{"name":"Spom972h-PISD","type":"exact"}],"termid":"PR:O14333"}


id: PBO:0052767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 59","termid":"PBO:0052767"}


id: FYPO:0003889
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thinner than normal at the old end of the cell.","definition_xrefs":["PomBase:mah","PMID:10547441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall thickness at cell tip during vegetative growth","termid":"FYPO:0006746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002946"],"is_obsolete":false,"name":"decreased cell wall thickness at old end during vegetative growth","synonyms":[{"name":"decreased cell wall thickness at growing end during vegetative growth","type":"related"},{"name":"decreased cell wall thickness at old end during mitotic cell cycle","type":"related"},{"name":"reduced cell wall thickness at old end during vegetative growth","type":"exact"},{"name":"thin cell wall at old end during vegetative growth","type":"exact"}],"termid":"FYPO:0003889"}


id: PATO:0001892
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality of having decreased odor.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"odorous","termid":"PATO:0001331"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased odor","termid":"PATO:0001892"}


id: PBO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sir2 family histone deacetylase Hst4","termid":"PBO:0001402"}


id: PBO:0046747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3 like 2","termid":"PBO:0046747"}


id: PBO:0080947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 2","termid":"PBO:0080947"}


id: GO:0140983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Ca2+(in) + Mn2+(out) = Ca2+(out) + Mn2+(in).","definition_xrefs":["PMID:30755481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"calcium:manganese antiporter activity","secondary_identifiers":["RHEA:73059"],"synonyms":[{"name":"manganese:calcium antiporter activity","type":"exact"}],"termid":"GO:0140983"}


id: GO:0019786
data:
  {"annotated_genes":["SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76683],"is_not":false,"summary":null,"term":"GO:0019786"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-C-terminal L-amino acid-glycyl-phosphatidylethanolamide + H2O = [protein]-C-terminal L-amino acid-glycine + a 1,2-diacyl-sn-glycero-3-phosphoethanolamine. An example of this reaction is the removal of ATG8 from membranes to which it is covalently linked to a phosphatidylethanolamid via its terminal glycine residue.","definition_xrefs":["PMID:22652539","PMID:28330855","PMID:22240591","PMID:2882172","PMID:28901328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"protein-phosphatidylethanolamide deconjugating activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"APG8-PE hydrolase","type":"related"},{"name":"APG8-specific protease activity","type":"narrow"},{"name":"ATG8-PE deconjugation activity","type":"narrow"},{"name":"ATG8-PE hydrolase activity","type":"narrow"},{"name":"Atg8-specific peptidase activity","type":"narrow"},{"name":"Atg8-specific protease activity","type":"exact"}],"termid":"GO:0019786","terms_by_termid":{"GO:0019786":null}}


id: GO:0045880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway","termid":"GO:0008589"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway","secondary_identifiers":["GO:0045878"],"synonyms":[{"name":"activation of smoothened signaling pathway","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway","type":"exact"},{"name":"positive regulation of hh signaling pathway","type":"exact"},{"name":"positive regulation of smoothened by patched","type":"related"},{"name":"positive regulation of smoothened receptor activity by patched","type":"related"},{"name":"positive regulation of smoothened signalling pathway","type":"exact"},{"name":"stimulation of smoothened signaling pathway","type":"narrow"},{"name":"up regulation of smoothened signaling pathway","type":"exact"},{"name":"up-regulation of smoothened signaling pathway","type":"exact"},{"name":"upregulation of smoothened signaling pathway","type":"exact"}],"termid":"GO:0045880"}


id: MONDO:0012874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disseminated superficial actinic porokeratosis","termid":"MONDO:0019212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 6, disseminated superficial actinic type","secondary_identifiers":["GARD:15552","MESH:C567339","MEDGEN:394063","OMIM:612353","UMLS:C2676508"],"synonyms":[{"name":"POROK6","type":"exact"},{"name":"porokeratosis 6, disseminated superficial","type":"related"},{"name":"porokeratosis 6, disseminated superficial actinic type","type":"exact"},{"name":"porokeratosis 6, multiple types","type":"related"},{"name":"porokeratosis, disseminated superficial actinic, 4","type":"related"}],"termid":"MONDO:0012874","xrefs":{"Monarch":{"xref_id":"0012874"}}}


id: GO:1904014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a serotonin stimulus.","definition_xrefs":["PMID:1505525","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monoamine","termid":"GO:0071867"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to serotonin","termid":"GO:1904014"}


id: GO:0030922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-(E)-2,3-didehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["RESID:AA0365","PMID:12623015"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine dehydrogenation to form (E)-2,3-didehydrotyrosine (obsolete GO:0030922)","termid":"GO:0030922"}


id: FYPO:0003687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to nucleolus","synonyms":[{"name":"abnormal protein localisation to nucleolus","type":"exact"},{"name":"abnormal protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0003687"}


id: PR:Q10305
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A rab GDP dissociation inhibitor beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway GDP dissociation inhibitor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.12c","secondary_identifiers":["UniProtKB:Q10305"],"synonyms":[{"name":"SPAC22H10.12c","type":"related"},{"name":"Spom972h-GDI2","type":"exact"},{"name":"sec19","type":"related"}],"termid":"PR:Q10305"}


id: PBO:0030485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transport","termid":"PBO:0030485"}


id: GO:1904260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of basement membrane assembly involved in embryonic body morphogenesis.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:23940118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of extracellular matrix assembly","termid":"GO:1901202"},{"relation_name":"is_a","term_name":"regulation of basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:1904259"},{"relation_name":"negatively_regulates","term_name":"basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:2001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of basement membrane assembly involved in embryonic body morphogenesis","synonyms":[{"name":"down regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"down-regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"downregulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"inhibition of basement membrane assembly involved in embryonic body morphogenesis","type":"narrow"}],"termid":"GO:1904260"}


id: GO:1900192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation","termid":"GO:1900190"},{"relation_name":"positively_regulates","term_name":"single-species biofilm formation","termid":"GO:0044010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-species biofilm formation","synonyms":[{"name":"activation of single-species biofilm formation","type":"narrow"},{"name":"up regulation of single-species biofilm formation","type":"exact"},{"name":"up-regulation of single-species biofilm formation","type":"exact"},{"name":"upregulation of single-species biofilm formation","type":"exact"}],"termid":"GO:1900192"}


id: PBO:0001644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Ost4 (predicted)","termid":"PBO:0001644"}


id: PBO:0054635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2040","termid":"PBO:0054635"}


id: PBO:0054321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1713","termid":"PBO:0054321"}


id: GO:2000787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell differentiation","termid":"GO:0110057"},{"relation_name":"regulates","term_name":"venous endothelial cell fate commitment","termid":"GO:0060845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of venous endothelial cell fate commitment","termid":"GO:2000787"}


id: PATO:0000980
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000980 absolute porosity value (obsolete PATO:0000980)","termid":"PATO:0000980"}


id: PBO:0017477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contains_process","termid":"PBO:0017477"}


id: PBO:0052312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0753","termid":"PBO:0052312"}


id: MONDO:0100568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Mycobacterium tuberculosis, protection against (obsolete MONDO:0100568)","termid":"MONDO:0100568","xrefs":{"Monarch":{"xref_id":"0100568"}}}


id: PBO:0029437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029437"}


id: MOD:01494
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["Unimod:533#K","OMSSA:171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ115","type":"related"},{"name":"iTRAQ115K","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01494"}


id: PBO:0080076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP38 divergent transcript","termid":"PBO:0080076"}


id: GO:0035699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a T-helper 17 cell from the blood vessels into the surrounding tissue.","definition_xrefs":["GOC:BHF","CL:0000899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helper T cell extravasation","termid":"GO:0035684"},{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 cell extravasation","termid":"GO:0035699"}


id: MOD:01749
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01749"}


id: PBO:0045310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3 like","termid":"PBO:0045310"}


id: GO:0047149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homocysteine + dimethylsulfonioacetate = (methylthio)acetate + L-methionine + H+.","definition_xrefs":["EC:2.1.1.3","RHEA:22788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"thetin-homocysteine S-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.3-RXN","KEGG_REACTION:R04153"],"synonyms":[{"name":"dimethylsulfonioacetate:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"dimethylthetin-homocysteine methyltransferase activity","type":"related"},{"name":"thetin-homocysteine methylpherase activity","type":"related"}],"termid":"GO:0047149"}


id: MONDO:0018140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete burning mouth syndrome (obsolete MONDO:0018140)","termid":"MONDO:0018140","xrefs":{"Monarch":{"xref_id":"0018140"}}}


id: PBO:0063080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPPA antisense RNA 2","termid":"PBO:0063080"}


id: PR:O74981
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug112 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 112 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.02","synonyms":[{"name":"Spom972h-mug112","type":"exact"}],"termid":"PR:O74981"}


id: GO:0061052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle hypertrophy","termid":"GO:0010614"},{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle tissue growth","termid":"GO:0055022"},{"relation_name":"is_a","term_name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"},{"relation_name":"negatively_regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061052"}


id: MONDO:0100417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly WT1 gene mutation. (A change in the nucleotide sequence of the WT1 gene.)","definition_xrefs":["NCIT:C146726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, WT1 gene mutation","synonyms":[{"name":"AML, GUD Gene Mutation","type":"exact"},{"name":"AML, WAGR Gene Mutation","type":"exact"},{"name":"AML, WIT-2 Gene Mutation","type":"exact"},{"name":"AML, WT1 gene mutation","type":"exact"},{"name":"AML, WT1 mutation","type":"exact"},{"name":"AML, WT33 Gene Mutation","type":"exact"},{"name":"AML, Wilms Tumor 1 Gene Mutation","type":"exact"},{"name":"AML, Wilms Tumour 1 Gene Mutation","type":"exact"}],"termid":"MONDO:0100417","xrefs":{"Monarch":{"xref_id":"0100417"}}}


id: PBO:0075433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member B1","termid":"PBO:0075433"}


id: PBO:0087252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits pheromone induced signaling downstream of MAPK, possibly at the level of the Ste12p transcription factor","termid":"PBO:0087252"}


id: MONDO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"African tick-bite fever","secondary_identifiers":["DOID:0050035","SCTID:415561000","UMLS:C1320317","MEDGEN:728968"],"synonyms":[{"name":"Rickettsia africae spotted fever","type":"related"},{"name":"South African tick-bite fever","type":"related"}],"termid":"MONDO:0000227","xrefs":{"Monarch":{"xref_id":"0000227"}}}


id: MONDO:0009994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rapidly growing malignant mesenchymal neoplasm. It is characterized by the presence of round cells with myoblastic differentiation and a fibrovascular stroma resembling an alveolar growth pattern. The tumor usually presents in the extremities.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"alveolar rhabdomyosarcoma","secondary_identifiers":["ICD9:171.9","GARD:4701","UMLS:C0206655","EFO:0000248","icd11.foundation:1742058067","DOID:4051","NCIT:C3749","SCTID:404053004","MedDRA:10065867","ONCOTREE:ARMS","OMIM:268220","MEDGEN:61651","HP:0006779","ICDO:8920/3","MESH:D018232","Orphanet:99756"],"synonyms":[{"name":"ARMS","type":"exact"},{"name":"RMS2","type":"related"},{"name":"alveolar childhood rhabdomyosarcoma","type":"exact"},{"name":"alveolar rhabdomyosarcoma","type":"exact"},{"name":"alveolar rhabdomyosarcoma (disease)","type":"exact"},{"name":"alveolar rhabdomyosarcoma (morphologic abnormality)","type":"exact"},{"name":"arms","type":"exact"},{"name":"monomorphous round cell rhabdomyosarcoma","type":"exact"},{"name":"paediatric alveolar rhabdomyosarcoma","type":"exact"},{"name":"pediatric alveolar rhabdomyosarcoma","type":"exact"},{"name":"rhabdomyosarcoma 2","type":"related"},{"name":"rhabdomyosarcoma 2, alveolar, somatic mutation","type":"exact"},{"name":"rhabdomyosarcoma alveolar","type":"related"},{"name":"rhabdomyosarcoma type 2","type":"exact"},{"name":"rhabdomyosarcoma, alveolar","type":"related"},{"name":"rhabdomyosarcoma, alveolar, somatic mutation","type":"exact"}],"termid":"MONDO:0009994","xrefs":{"Monarch":{"xref_id":"0009994"}}}


id: GO:0070089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium cation by a channel that opens when a chloride ion has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:kmv","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"monoatomic ion-gated channel activity","termid":"GO:0022839"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"chloride-activated potassium channel activity","termid":"GO:0070089"}


id: MONDO:0030770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of deglycosylation","termid":"MONDO:0031376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of deglycosylation 2","secondary_identifiers":["UMLS:C5676931","MEDGEN:1809253","OMIM:619775"],"synonyms":[{"name":"CDDG2","type":"exact"},{"name":"congenital disorder of deglycosylation 2","type":"exact"}],"termid":"MONDO:0030770","xrefs":{"Monarch":{"xref_id":"0030770"}}}


id: PBO:0070711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 16","termid":"PBO:0070711"}


id: PBO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 8","termid":"PBO:0071350"}


id: MONDO:0019562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized scleroderma is the skin localized form of scleroderma characterized by fibrosis of the skin causing cutaneous plaques or strips.","definition_xrefs":["Orphanet:90289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scleroderma","termid":"MONDO:0019340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"localized scleroderma","secondary_identifiers":["NCIT:C72069","UMLS:C0036420","ICD9:701.0","MedDRA:10039712","SCTID:201048007","DOID:8472","EFO:1001361","icd11.foundation:1430740369","GARD:7058","MEDGEN:48586","MESH:D012594"],"synonyms":[{"name":"Scleroderma, circumscribed or localised","type":"exact"},{"name":"Scleroderma, circumscribed or localized","type":"exact"},{"name":"Scleroderma, localised","type":"related"},{"name":"Scleroderma, localized","type":"related"},{"name":"circumscribed scleroderma","type":"exact"},{"name":"localised fibrosing scleroderma","type":"exact"},{"name":"localised morphea","type":"exact"},{"name":"localised morphoea","type":"exact"},{"name":"localised scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"localized fibrosing scleroderma","type":"exact"},{"name":"localized morphea","type":"exact"},{"name":"localized morphoea","type":"exact"},{"name":"localized scleroderma","type":"exact"},{"name":"localized scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"morphea","type":"exact"}],"termid":"MONDO:0019562","xrefs":{"Monarch":{"xref_id":"0019562"}}}


id: GO:0048634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"muscle organ development","termid":"GO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle organ development","termid":"GO:0048634"}


id: MOD:00925
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a heptose sugar group through a glycosidic bond.","definition_xrefs":["Unimod:490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"heptosylated residue","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:00925"}


id: MONDO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schistosoma mansoni infection, susceptibility (obsolete MONDO:0000093)","termid":"MONDO:0000093","xrefs":{"Monarch":{"xref_id":"0000093"}}}


id: PBO:0079868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unk like zinc finger","termid":"PBO:0079868"}


id: PBO:0049821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC11 antisense RNA 1","termid":"PBO:0049821"}


id: GO:0021725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior raphe nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cvs","GOC:dph","GOC:curators","GO_REF:0000021","GOC:dgh","PMID:19003874","GOC:jid","GOC:cls","GOC:cjm","ZFA:0000440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior raphe nucleus development","synonyms":[{"name":"anterior raphe nucleus development","type":"broad"},{"name":"superior central nucleus development","type":"broad"}],"termid":"GO:0021725"}


id: GO:0031217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4) linkages in (1->4)-beta-D-glucans, to remove successive glucose units.","definition_xrefs":["GOC:mlg","EC:3.2.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"glucan 1,4-beta-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.74-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan glucohydrolase activity","type":"broad"},{"name":"beta-1,4-beta-glucanase activity","type":"broad"},{"name":"beta-1,4-glucanase activity","type":"broad"},{"name":"exo-1,4-beta-D-glucosidase activity","type":"related"},{"name":"exo-1,4-beta-glucanase activity","type":"exact"},{"name":"exo-1,4-beta-glucosidase activity","type":"exact"},{"name":"exo-beta-1,4-glucanase activity","type":"exact"},{"name":"exo-beta-1,4-glucosidase activity","type":"exact"},{"name":"exocellulase activity","type":"exact"}],"termid":"GO:0031217"}


id: MONDO:0031068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, axonal, IIa 2II","secondary_identifiers":["MEDGEN:1824000","OMIM:620068","UMLS:C5774227"],"synonyms":[{"name":"CMT2II","type":"exact"},{"name":"charcot-marie-tooth disease, axonal, IIa 2II","type":"exact"},{"name":"charcot-marie-tooth neuropathy, IIa 2II","type":"exact"}],"termid":"MONDO:0031068","xrefs":{"Monarch":{"xref_id":"0031068"}}}


id: FYPO:0003878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to monensin. Cells stop growing (and may die) at a concentration of monensin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to monensin","synonyms":[{"name":"hypersensitive to monensin","type":"exact"},{"name":"sensitive to monensin A","type":"narrow"},{"name":"sensitive to monensin during mitotic cell cycle","type":"related"},{"name":"sensitive to monensin during vegetative growth","type":"exact"}],"termid":"FYPO:0003878"}


id: PBO:0075070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 119","termid":"PBO:0075070"}


id: MONDO:1011680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postpartum dysgalactia syndrome, non-human animal","secondary_identifiers":["OMIA:001822"],"termid":"MONDO:1011680","xrefs":{"Monarch":{"xref_id":"1011680"}}}


id: PBO:0074042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 25","termid":"PBO:0074042"}


id: GO:0021998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that regulates the coordinated growth and differentiation that establishes the non-random mediolateral spatial arrangement of the neural plate.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural plate regionalization","termid":"GO:0060897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate mediolateral regionalization","synonyms":[{"name":"neural plate mediolateral pattern formation","type":"related"}],"termid":"GO:0021998"}


id: GO:0010869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency or rate of receptor biosynthesis. Receptor biosynthesis is the collection of chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of receptor biosynthetic process (obsolete GO:0010869)","termid":"GO:0010869"}


id: PBO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLEYA domain","termid":"PBO:0000092"}


id: GO:0004417
data:
  {"annotated_genes":["SJAG_00381"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65488],"is_not":false,"summary":null,"term":"GO:0004417"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(2-hydroxyethyl)-4-methylthiazole + ATP = 4-methyl-5-(2-phosphoethyl)-thiazole + ADP + 2 H+.","definition_xrefs":["RHEA:24212","EC:2.7.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"hydroxyethylthiazole kinase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R04448","MetaCyc:THIAZOLSYN3-RXN"],"synonyms":[{"name":"4-methyl-5-(beta-hydroxyethyl)thiazole kinase activity","type":"related"},{"name":"ATP:4-methyl-5-(2-hydroxyethyl)thiazole 2-phosphotransferase activity","type":"related"},{"name":"hydroxyethylthiazole kinase (phosphorylating)","type":"related"}],"termid":"GO:0004417","terms_by_termid":{"GO:0004417":null}}


id: PBO:0067361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 460, pseudogene","termid":"PBO:0067361"}


id: PBO:0108546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage factor complex RNA-binding protein Rna15","termid":"PBO:0108546"}


id: PBO:0025480
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a cup of GReen Tea wakes up the sleepy guy","termid":"PBO:0025480"}


id: PBO:0048213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit theta","termid":"PBO:0048213"}


id: FYPO:0009063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to X-rays.","direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to ionizing radiation during vegetative growth","termid":"FYPO:0000267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to X-rays during vegetative growth","synonyms":[{"name":"decreased vegetative cell population growth during cellular response to X rays","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to X-rays","type":"exact"},{"name":"sensitive to X rays during vegetative growth","type":"exact"}],"termid":"FYPO:0009063"}


id: GO:0009546
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the plasma membrane and the desmotubule of a plasmodesma.","definition_xrefs":["PMID:29880547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"plasmodesma","termid":"GO:0009506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasmodesmatal cytoplasmic sleeve","synonyms":[{"name":"plasmodesmatal cytoplasmic annulus","type":"exact"}],"termid":"GO:0009546"}


id: PBO:0061785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncomodulin","termid":"PBO:0061785"}


id: PBO:0041516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 open reading frame 48","termid":"PBO:0041516"}


id: PBO:0091868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Stb3","termid":"PBO:0091868"}


id: PBO:0040628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell scaffold protein with ankyrin repeats 1","termid":"PBO:0040628"}


id: PBO:0065437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 10","termid":"PBO:0065437"}


id: PR:Q11120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ofd1 gene.","definition_xrefs":["UniProtKB:Q11120","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3,4-dihydroxylase ofd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.08c","synonyms":[{"name":"2-oxoglutarate and Fe(II) dioxygenase domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PKHD-type hydroxylase ofd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ofd1","type":"exact"}],"termid":"PR:Q11120"}


id: PBO:0058755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6879","termid":"PBO:0058755"}


id: MONDO:0011386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microvascular complications of diabetes, susceptibility in which the cause of the disease is a mutation in the VEGFA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvascular complications of diabetes, susceptibility","termid":"MONDO:0000065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microvascular complications of diabetes, susceptibility to, 1","secondary_identifiers":["OMIM:603933","MEDGEN:382957","UMLS:C2676832"],"synonyms":[{"name":"MVCD1","type":"related"},{"name":"VEGFA microvascular complications of diabetes, susceptibility","type":"exact"},{"name":"end-stage renal disease, diabetic, susceptibility to","type":"related"},{"name":"microvascular complications of diabetes 1","type":"exact"},{"name":"microvascular complications of diabetes, protection against","type":"related"},{"name":"microvascular complications of diabetes, susceptibility caused by mutation in VEGFA","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to","type":"related"},{"name":"microvascular complications of diabetes, susceptibility to, 1","type":"exact"},{"name":"microvascular complications of diabetes, susceptibility to, type 1","type":"exact"},{"name":"nephropathy, diabetic, susceptibility to","type":"related"},{"name":"neuropathy, diabetic, susceptibility to","type":"related"},{"name":"nonproliferative retinopathy, diabetic, susceptibility to","type":"related"},{"name":"proliferative retinopathy, diabetic, susceptibility to","type":"related"}],"termid":"MONDO:0011386","xrefs":{"Monarch":{"xref_id":"0011386"}}}


id: PBO:0066545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 9","termid":"PBO:0066545"}


id: PBO:0013038
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TPP1","termid":"PBO:0013038"}


id: PBO:0089867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3","termid":"PBO:0089867"}


id: PBO:0049900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 1","termid":"PBO:0049900"}


id: PBO:0048068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 19","termid":"PBO:0048068"}


id: PBO:0073108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 9C member 7","termid":"PBO:0073108"}


id: GO:1903954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:nc","GOC:BHF","GO_REF:0000059","GOC:TermGenie","PMID:25281747"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization (obsolete GO:1903954)","synonyms":[{"name":"activation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"narrow"},{"name":"positive regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"}],"termid":"GO:1903954"}


id: PBO:0052586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 4","termid":"PBO:0052586"}


id: MONDO:0005249
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"}]},"cv_name":"mondo","definition":"An acute, acute and chronic, or chronic inflammation focally or diffusely affecting the lung parenchyma, caused by an infection in one or both of the lungs (by bacteria, viruses, fungi, or mycoplasma.). Symptoms include cough, shortness of breath, fevers, chills, chest pain, headache, sweating, and weakness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"pneumonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:486","MESH:D011014","DOID:552","ICD10CM:J18.9","icd11.foundation:142052508","ICD9:483.8","ICD9:484.8","NCIT:C3333","ICD9:483","MEDGEN:10813","SCTID:233604007","EFO:0003106","UMLS:C0032285","ICD10CM:J15"],"synonyms":[{"name":"acute pneumonia","type":"narrow"}],"termid":"MONDO:0005249","terms_by_termid":{"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0005249"}}}


id: PBO:0109829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTT co-chaperone complex, WD repeat subunit Asa1","termid":"PBO:0109829"}


id: PATO:0000463
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of being clearly visible.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conspicuousness","termid":"PATO:0001998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conspicuous","synonyms":[{"name":"distinct","type":"related"}],"termid":"PATO:0000463"}


id: PR:O94419
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1620.12c gene.","definition_xrefs":["UniProtKB:O94419","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein C1620.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.12c","synonyms":[{"name":"Spom972h-SPCC1620.12c","type":"exact"}],"termid":"PR:O94419"}


id: PBO:0046621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 2","termid":"PBO:0046621"}


id: PBO:0038853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 20","termid":"PBO:0038853"}


id: PBO:0050422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H1 pseudogene 1","termid":"PBO:0050422"}


id: PBO:0061115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 6","termid":"PBO:0061115"}


id: GO:0070196
data:
  {"annotated_genes":["SJAG_02376"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111088],"is_not":false,"summary":null,"term":"GO:0070196"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic translation initiation factor 3 complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02376":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eIF-3 assembly","type":"exact"},{"name":"eIF3 assembly","type":"exact"}],"termid":"GO:0070196","terms_by_termid":{"GO:0070196":null}}


id: PBO:0063295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 9 pseudogene","termid":"PBO:0063295"}


id: GO:0150173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylcholine metabolic process.","definition_xrefs":["GOC:bc","PMID:30074985","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylcholine metabolic process","termid":"GO:0150173"}


id: GO:0009729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a brassinosteroid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to brassinosteroid","termid":"GO:0009741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of brassinosteroid stimulus","synonyms":[{"name":"perception of brassinosteroid stimulus","type":"related"}],"termid":"GO:0009729"}


id: GO:0047473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ATP-dependent activation of D-alanine and its transfer as a thiol ester to the phosphopantheinyl prosthetic group of a D-alanyl carrier protein, according to the reaction: ATP + D-alanine + a [D-alaninyl carrier protein] = a D-alanyl-[D-alanyl carrier protein] + AMP + diphosphate.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"D-alanine [D-alanyl carrier protein] ligase activity","synonyms":[{"name":"D-alanine-D-alanyl carrier protein ligase activity","type":"related"},{"name":"D-alanine-activating enzyme activity","type":"related"},{"name":"D-alanine-poly(phosphoribitol) ligase activity","type":"broad"},{"name":"D-alanine:poly(phosphoribitol) ligase (AMP-forming)","type":"broad"}],"termid":"GO:0047473"}


id: MONDO:0008080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"schwannomatosis","termid":"MONDO:0008075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"neurofibromatosis, type III, mixed central and peripheral","secondary_identifiers":["SCTID:254240003","UMLS:C2931480","MESH:C537389","GARD:15094","OMIM:162260","MEDGEN:419422"],"synonyms":[{"name":"NF3A","type":"related"},{"name":"Nf 3","type":"related"},{"name":"neurofibromas, palmar cutaneous","type":"related"},{"name":"neurofibromatosis, type III, Riccardi type","type":"related"},{"name":"neurofibromatosis, type III, mixed central and peripheral","type":"exact"},{"name":"neurofibromatosis, type III, of Riccardi","type":"related"}],"termid":"MONDO:0008080","xrefs":{"Monarch":{"xref_id":"0008080"}}}


id: GO:0090087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of peptide transport","termid":"GO:0090087"}


id: PBO:0031262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0031262"}


id: GO:0014889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in the muscle, that is characterized by a decrease in protein content, fiber diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle atrophy","secondary_identifiers":["Wikipedia:Muscle_atrophy"],"termid":"GO:0014889"}


id: GO:0032884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cell wall chitin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell wall chitin biosynthetic process (obsolete GO:0032884)","synonyms":[{"name":"regulation of cell wall chitin anabolism","type":"exact"},{"name":"regulation of cell wall chitin biosynthesis","type":"exact"},{"name":"regulation of cell wall chitin formation","type":"exact"},{"name":"regulation of cell wall chitin synthesis","type":"exact"}],"termid":"GO:0032884"}


id: GO:1904692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type B pancreatic cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24055447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell proliferation","termid":"GO:0061469"},{"relation_name":"positively_regulates","term_name":"type B pancreatic cell proliferation","termid":"GO:0044342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type B pancreatic cell proliferation","synonyms":[{"name":"activation of pancreatic B cell proliferation","type":"narrow"},{"name":"activation of pancreatic beta cell proliferation","type":"narrow"},{"name":"activation of type B pancreatic cell proliferation","type":"narrow"},{"name":"positive regulation of pancreatic B cell proliferation","type":"exact"},{"name":"positive regulation of pancreatic beta cell proliferation","type":"exact"},{"name":"up regulation of pancreatic B cell proliferation","type":"exact"},{"name":"up regulation of pancreatic beta cell proliferation","type":"exact"},{"name":"up regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"up-regulation of pancreatic B cell proliferation","type":"exact"},{"name":"up-regulation of pancreatic beta cell proliferation","type":"exact"},{"name":"up-regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"upregulation of pancreatic B cell proliferation","type":"exact"},{"name":"upregulation of pancreatic beta cell proliferation","type":"exact"},{"name":"upregulation of type B pancreatic cell proliferation","type":"exact"}],"termid":"GO:1904692"}


id: PBO:0068355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138","termid":"PBO:0068355"}


id: PBO:0026719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2B_localization_to_chromatin_at_protein_coding_gene","termid":"PBO:0026719"}


id: PBO:0058854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8083","termid":"PBO:0058854"}


id: GO:1905196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATPase activity, uncoupled.","definition_xrefs":["PMID:26545917","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ATPase activity, uncoupled (obsolete GO:1905196)","synonyms":[{"name":"activation of ATPase activity, uncoupled","type":"narrow"},{"name":"activation of adenylpyrophosphatase activity","type":"related"},{"name":"positive regulation of adenylpyrophosphatase activity","type":"related"},{"name":"up regulation of ATPase activity, uncoupled","type":"exact"},{"name":"up regulation of adenylpyrophosphatase activity","type":"related"},{"name":"up-regulation of ATPase activity, uncoupled","type":"exact"},{"name":"up-regulation of adenylpyrophosphatase activity","type":"related"},{"name":"upregulation of ATPase activity, uncoupled","type":"exact"},{"name":"upregulation of adenylpyrophosphatase activity","type":"related"}],"termid":"GO:1905196"}


id: PBO:0044870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2D","termid":"PBO:0044870"}


id: MONDO:0014360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the NECAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0700092","MONDO:0005066","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 21","secondary_identifiers":["MEDGEN:862867","OMIM:615833","DOID:0080443","GARD:16017","UMLS:C4014430"],"synonyms":[{"name":"DEE21","type":"exact"},{"name":"EIEE21","type":"exact"},{"name":"NECAP1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 21","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in NECAP1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 21","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 21","type":"exact"}],"termid":"MONDO:0014360","xrefs":{"Monarch":{"xref_id":"0014360"}}}


id: PBO:0090992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase Spg1/Lcb3","termid":"PBO:0090992"}


id: FYPO:0003965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased glutathione disulfide oxidoreductase activity","termid":"FYPO:0003965"}


id: PR:Q9URZ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-L-isoaspartate(D-aspartate) O-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11579:SF0","OMA:SCHPO02279","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate O-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.08","secondary_identifiers":["UniProtKB:Q9URZ1"],"synonyms":[{"name":"L-isoaspartyl protein carboxyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCMT1","type":"exact"},{"name":"protein L-isoaspartyl methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein-beta-aspartate methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URZ1"}


id: PBO:0073667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal induced proliferation associated 1 like 2","termid":"PBO:0073667"}


id: GO:0071403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high density lipoprotein particle stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to high density lipoprotein particle stimulus","secondary_identifiers":["GO:0055099"],"synonyms":[{"name":"cellular response to high-density lipoprotein particle stimulus","type":"exact"},{"name":"response to high density lipoprotein particle","type":"broad"},{"name":"response to high density lipoprotein particle stimulus","type":"broad"}],"termid":"GO:0071403"}


id: GO:1902685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor localization to synapse.","definition_xrefs":["GO_REF:0000058","PMID:22252129","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"positively_regulates","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor localization to synapse","synonyms":[{"name":"activation of receptor localisation to synapse","type":"narrow"},{"name":"activation of receptor localization to synapse","type":"narrow"},{"name":"positive regulation of receptor localisation to synapse","type":"exact"},{"name":"up regulation of receptor localisation to synapse","type":"exact"},{"name":"up regulation of receptor localization to synapse","type":"exact"},{"name":"up-regulation of receptor localisation to synapse","type":"exact"},{"name":"up-regulation of receptor localization to synapse","type":"exact"},{"name":"upregulation of receptor localisation to synapse","type":"exact"},{"name":"upregulation of receptor localization to synapse","type":"exact"}],"termid":"GO:1902685"}


id: PBO:0074684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 64","termid":"PBO:0074684"}


id: PBO:0080418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 2","termid":"PBO:0080418"}


id: GO:1901759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-L-Ara4N-lipid A.","definition_xrefs":["GOC:TermGenie","PMID:17928292","PMID:19166326","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-L-Ara4N-lipid A metabolic process","synonyms":[{"name":"4-amino-4-deoxy-beta-L-arabinose-lipid A metabolic process","type":"exact"},{"name":"4-amino-4-deoxy-beta-L-arabinose-lipid A metabolism","type":"exact"},{"name":"beta-L-Ara4N-lipid A metabolism","type":"exact"}],"termid":"GO:1901759"}


id: PBO:0069174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 428, pseudogene","termid":"PBO:0069174"}


id: GO:0008970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = a 2-acyl-sn-glycero-3-phosphocholine + a fatty acid + H+.","definition_xrefs":["RHEA:18689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phospholipase A1 activity","secondary_identifiers":["Reactome:R-HSA-1482920","Reactome:R-HSA-1482932","Reactome:R-HSA-5694485","Reactome:R-HSA-1482862","EC:3.1.1.32","MetaCyc:PHOSPHOLIPASE-A1-RXN","Reactome:R-HSA-1482827","Reactome:R-HSA-1482828","Reactome:R-HSA-1482847","Reactome:R-HSA-1482892"],"synonyms":[{"name":"phosphatidylcholine 1-acylhydrolase activity","type":"exact"},{"name":"phosphatidylserine 1-acylhydrolase activity","type":"narrow"}],"termid":"GO:0008970"}


id: PBO:0066818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 117","termid":"PBO:0066818"}


id: MONDO:0017131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary cardiac anomaly (obsolete MONDO:0017131)","secondary_identifiers":["Orphanet:271853"],"synonyms":[{"name":"genetic cardiac anomaly","type":"exact"}],"termid":"MONDO:0017131","xrefs":{"Monarch":{"xref_id":"0017131"}}}


id: GO:0051034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tRNA, transfer ribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transmembrane transporter activity","termid":"GO:0051033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"tRNA transmembrane transporter activity","termid":"GO:0051034"}


id: PBO:0058294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4668","termid":"PBO:0058294"}


id: GO:0010090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a hair cell (trichome) cell are generated and organized. This process occurs while the initially relatively unspecialized epidermal cell is acquiring the specialized features of a hair cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tair_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"trichome differentiation","termid":"GO:0010026"},{"relation_name":"part_of","term_name":"plant epidermis morphogenesis","termid":"GO:0090626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome morphogenesis","secondary_identifiers":["GO:0048272"],"synonyms":[{"name":"trichome cell morphogenesis during differentiation","type":"exact"}],"termid":"GO:0010090"}


id: PBO:0057723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-8","termid":"PBO:0057723"}


id: MONDO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tetanus (obsolete MONDO:0018012)","termid":"MONDO:0018012","xrefs":{"Monarch":{"xref_id":"0018012"}}}


id: GO:0004187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential release of a C-terminal arginine or lysine residue. Function is inhibited by diisopropyl fluorophosphate and sensitive to thiol-blocking reagents.","definition_xrefs":["EC:3.4.16.6"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase D activity (obsolete GO:0004187)","synonyms":[{"name":"CPDW-II","type":"related"},{"name":"KEX1 carboxypeptidase activity","type":"related"},{"name":"KEX1 proteinase activity","type":"related"},{"name":"KEX1DELTAp","type":"related"},{"name":"carboxypeptidase D activity","type":"exact"},{"name":"carboxypeptidase KEX1 activity","type":"narrow"},{"name":"carboxypeptidase Kex1","type":"related"},{"name":"carboxypeptidase S1 activity","type":"related"},{"name":"cereal serine carboxypeptidase II","type":"related"},{"name":"gene KEX1 serine carboxypeptidase","type":"narrow"},{"name":"saccharomyces cerevisiae KEX1 gene product","type":"related"}],"termid":"GO:0004187"}


id: GO:0002546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the tissue kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kinin cascade","termid":"GO:0002257"},{"relation_name":"is_a","term_name":"regulation of tissue kallikrein-kinin cascade","termid":"GO:0002382"},{"relation_name":"negatively_regulates","term_name":"tissue kallikrein-kinin cascade","termid":"GO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"negative regulation of tissue kallikrein-kinin cascade","synonyms":[{"name":"down regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"down-regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"downregulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"inhibition of tissue kallikrein-kinin cascade","type":"narrow"},{"name":"negative regulation of glandular kallikrein-kinin cascade","type":"exact"}],"termid":"GO:0002546"}


id: PBO:0042806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide kinase like","termid":"PBO:0042806"}


id: _global:orthologous_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"homologous_to","termid":"_global:homologous_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous_to","termid":"_global:orthologous_to"}


id: PBO:0069877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1164, pseudogene","termid":"PBO:0069877"}


id: PR:P0CT65
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1602 gene.","definition_xrefs":["UniProtKB:P0CT65","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S16-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.04c","synonyms":[{"name":"Spom972h-rps1602","type":"exact"}],"termid":"PR:P0CT65"}


id: SO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains a mutation involving the deletion or insertion of one or more bases, where this number is divisible by 3.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe","termid":"SO:0001817"}


id: GO:1990810
data:
  {"annotated_genes":["SJAG_03116","SJAG_01613","SJAG_03062","SJAG_01546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73800,96527,98986,102801],"is_not":false,"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a mitotic spindle pole body. Microtubules attach to spindle pole bodies at the minus end.","definition_xrefs":["PMID:17486116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring at spindle pole body","termid":"GO:0034631"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in mitosis","termid":"GO:1902850"},{"relation_name":"part_of","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000070","GO:0007049","GO:0000226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"microtubule anchoring at mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990810","terms_by_termid":{"GO:1990810":null}}


id: PBO:0113545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter that mediates zinc transport into vacuole; overexpression confers resistance to cobalt and rhodium; targeted to vacuole via AP-3 pathway; protein abundance increases in response to DNA replication stress; COT1 has a paralog, ZRC1, that arose from the whole genome duplication","termid":"PBO:0113545"}


id: PBO:0041346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 70","termid":"PBO:0041346"}


id: GO:0034155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 7 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 7 signaling pathway","termid":"GO:0034154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 7 signaling pathway","synonyms":[{"name":"regulation of TLR7 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034155"}


id: GO:0160057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a plant endodermal cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["PMID:26415082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant endodermal cell fate specification","termid":"GO:0160057"}


id: MONDO:0014618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the IFT172 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 71","secondary_identifiers":["OMIM:616394","UMLS:C4225342","GARD:16101","MEDGEN:897209","ICD10CM:H35.5","DOID:0110363"],"synonyms":[{"name":"IFT172 retinitis pigmentosa","type":"exact"},{"name":"RP71","type":"exact"},{"name":"retinitis pigmentosa 71","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in IFT172","type":"exact"},{"name":"retinitis pigmentosa type 71","type":"exact"}],"termid":"MONDO:0014618","xrefs":{"Monarch":{"xref_id":"0014618"}}}


id: FYPO:0006446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in the mitochondrion is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased pre-mRNA level","termid":"FYPO:0001908"},{"relation_name":"is_a","term_name":"increased mitochondrial RNA level","termid":"FYPO:0003424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased mitochondrial pre-mRNA level","synonyms":[{"name":"accumulation of mitochondrial pre-mRNA transcripts","type":"related"},{"name":"increased mitochondrial pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial pre-mRNA level during vegetative growth","type":"exact"},{"name":"increased mitochondrial pre-mRNA transcript level","type":"exact"},{"name":"increased mitochondrial re-mRNA accumulation","type":"related"},{"name":"increased pre-mRNA level in mitochondrion","type":"exact"}],"termid":"FYPO:0006446"}


id: PBO:0054411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1807","termid":"PBO:0054411"}


id: PBO:0065892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB39A, member RAS oncogene family","termid":"PBO:0065892"}


id: PBO:0056778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 27","termid":"PBO:0056778"}


id: MONDO:0013818
data:
  {"annotated_genes":["SJAG_04118"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86053],"is_not":false,"summary":null,"term":"MONDO:0013818"}]},"cv_name":"mondo","definition":"Any tricho-hepato-enteric syndrome in which the cause of the disease is a mutation in the SKIV2L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichohepatoenteric syndrome","termid":"MONDO:0009105"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04118":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"trichohepatoenteric syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614602","DOID:0111416","GARD:15819","UMLS:C3281289","MEDGEN:482919"],"synonyms":[{"name":"SKIV2L tricho-hepato-enteric syndrome","type":"exact"},{"name":"THES2","type":"related"},{"name":"TRICHOHEPATOENTERIC syndrome 2","type":"related"},{"name":"Trichohepatoenteric syndrome 2","type":"exact"},{"name":"Trichohepatoenteric syndrome type 2","type":"exact"},{"name":"tricho-hepato-enteric syndrome caused by mutation in SKIV2L","type":"exact"}],"termid":"MONDO:0013818","terms_by_termid":{"MONDO:0013818":null},"xrefs":{"Monarch":{"xref_id":"0013818"}}}


id: GO:0140122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Lewy body formation.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inclusion body assembly","termid":"GO:0090083"},{"relation_name":"regulates","term_name":"Lewy body formation","termid":"GO:0140121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of Lewy body formation","termid":"GO:0140122"}


id: MONDO:1011953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysplasia, non-human animal","secondary_identifiers":["OMIA:000937"],"termid":"MONDO:1011953","xrefs":{"Monarch":{"xref_id":"1011953"}}}


id: PBO:0053233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luteinizing hormone subunit beta","termid":"PBO:0053233"}


id: PBO:0071403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 9","termid":"PBO:0071403"}


id: GO:0009581
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which an external stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of external stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of external stimulus","type":"related"}],"termid":"GO:0009581","terms_by_termid":{"GO:0050982":null}}


id: FYPO:0001691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing paraquat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on paraquat","synonyms":[{"name":"normal cell population growth in presence of paraquat","type":"exact"},{"name":"normal cell population growth on paraquat","type":"exact"},{"name":"normal cellular response to paraquat","type":"related"},{"name":"normal vegetative cell population growth on paraquat","type":"exact"}],"termid":"FYPO:0001691"}


id: MONDO:0005602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-seminomatous germ cell tumor arising from the ovary. It is characterized by the presence of various tissues which correspond to the different germinal layers (endoderm, mesoderm, and ectoderm). According to the level of differentiation of the tissues which comprise the tumor, ovarian teratomas are classified as mature or immature. Mature teratomas are composed of well differentiated, adult-type tissues. Immature teratomas are composed of immature, fetal type-tissues. Mature ovarian teratomas without a fetal-type component have an excellent outcome. The prognosis of immature ovarian teratomas is related to the grade and stage of the tumor.","definition_xrefs":["NCIT:C8110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal teratoma","termid":"MONDO:0006233"},{"relation_name":"is_a","term_name":"ovarian germ cell tumor","termid":"MONDO:0011366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian teratoma","secondary_identifiers":["UMLS:C0280131","icd11.foundation:1752240825","DOID:5567","EFO:0006463","MEDGEN:76072","SCTID:716077006"],"synonyms":[{"name":"germ cell teratoma of ovary","type":"exact"},{"name":"germ cell teratoma of the ovary","type":"exact"},{"name":"ovarian germ cell teratoma","type":"exact"},{"name":"ovarian teratoma","type":"exact"},{"name":"teratoma of ovary","type":"exact"},{"name":"teratoma of the ovary","type":"exact"}],"termid":"MONDO:0005602","xrefs":{"Monarch":{"xref_id":"0005602"}}}


id: GO:0009923
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetrameric complex of four different subunits which catalyzes the elongation of a fatty acid chain 2 carbon units at a time in the synthesis of very long chain fatty acids.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0032991","GO:0005789","GO:0005575"],"is_obsolete":false,"name":"fatty acid elongase complex","termid":"GO:0009923"}


id: FYPO:0005187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transport RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Transport RNAs are transcribed from genes whose products are involved in one or more transport processes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of transport gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of transport gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of transport gene transcripts during vegetative growth","type":"exact"},{"name":"decreased transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of transport gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005187"}


id: PBO:0015226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase Pdi2","termid":"PBO:0015226"}


id: MONDO:0012878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Cowden disease in which the cause of the disease is a mutation in the SDHB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"Cowden syndrome 2","secondary_identifiers":["OMIM:612359","MESH:C567337"],"synonyms":[{"name":"CWS2","type":"related"},{"name":"Cowden disease caused by mutation in SDHB","type":"exact"},{"name":"Cowden syndrome 2","type":"exact"},{"name":"Cowden syndrome type 2","type":"exact"},{"name":"SDHB Cowden disease","type":"exact"}],"termid":"MONDO:0012878","xrefs":{"Monarch":{"xref_id":"0012878"}}}


id: PBO:0082234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; weak, but broad substrate specificity for alpha-1,4- and alpha-1,6-glucosides; member of IMA isomaltase family; not required for isomaltose utilization, but Ima4p overexpression allows the ima1 null mutant to grow on isomaltose; identical to IMA3","termid":"PBO:0082234"}


id: FYPO:0001962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphatase activity","termid":"FYPO:0001756"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphatase activity","synonyms":[{"name":"protein phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0001962"}


id: MONDO:0018814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-SCID combined immunodeficiency","secondary_identifiers":["UMLS:C5680098","MEDGEN:1842865","Orphanet:480549","GARD:21981"],"synonyms":[{"name":"non-SCID","type":"exact"},{"name":"non-severe combined immunodeficiency","type":"exact"}],"termid":"MONDO:0018814","xrefs":{"Monarch":{"xref_id":"0018814"}}}


id: GO:0004823
data:
  {"annotated_genes":["SJAG_02015","SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75620,77757],"is_not":false,"summary":null,"term":"GO:0004823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: leucine + ATP + tRNA(Leu) = AMP + diphosphate + 2 H+ + Leu-tRNA(Leu).","definition_xrefs":["RHEA:11688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02015":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0140101","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"leucine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:LEUCINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379974","Reactome:R-HSA-380200","KEGG_REACTION:R03657","EC:6.1.1.4"],"synonyms":[{"name":"leucine translase activity","type":"related"},{"name":"leucine-tRNA synthetase activity","type":"related"},{"name":"leucine:tRNALeu ligase (AMP-forming)","type":"related"},{"name":"leucyl-tRNA synthetase activity","type":"exact"},{"name":"leucyl-transfer RNA synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"leucyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004823","terms_by_termid":{"GO:0004823":null}}


id: MONDO:0017419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital malformation characterized by the complete absence of all limbs.","definition_xrefs":["NCIT:C34370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic amelia","secondary_identifiers":["UMLS:C0002447","MedDRA:10001926","MEDGEN:8014","GARD:21179","Orphanet:294925","HP:0009827","SCTID:62588002"],"synonyms":[{"name":"amelia","type":"broad"},{"name":"isolated amelia","type":"related"},{"name":"nonsyndromic amelia","type":"exact"}],"termid":"MONDO:0017419","xrefs":{"Monarch":{"xref_id":"0017419"}}}


id: PBO:0053810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1069","termid":"PBO:0053810"}


id: PBO:0028299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0028299"}


id: GO:0010602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Regulation of the chemical reactions and pathways involving 1-aminocyclopropane-1-carboxylate, the anion of 1-aminocyclopropane-1-carboxylic acid, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["PMID:18055613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of 1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0010602"}


id: PBO:0056084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY75-CD302 readthrough","termid":"PBO:0056084"}


id: PBO:0048310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 21","termid":"PBO:0048310"}


id: GO:0044497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which one organism increases the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["GOC:fj","PMID:19837656","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of blood pressure in another organism (obsolete GO:0044497)","synonyms":[{"name":"positive regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044497"}


id: PBO:0052416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains and short cytoplasmic tail 1","termid":"PBO:0052416"}


id: PBO:0044202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L family member 3, pseudogene","termid":"PBO:0044202"}


id: GO:0098968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of a neurotransmitter receptor complex from the postsynaptic membrane to the postsynaptic early endosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"neurotransmitter receptor transport postsynaptic membrane to endosome","termid":"GO:0098968"}


id: MONDO:0009691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classical mycosis fungoides is the most common type of mycosis fungoides (MF), a form of cutaneous T-cell lymphoma, and is characterized by slow progression from patches to more infiltrated plaques and eventually to tumors.","definition_xrefs":["Orphanet:2584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell non-Hodgkin lymphoma","termid":"MONDO:0000607"},{"relation_name":"is_a","term_name":"mycosis fungoides and variants","termid":"MONDO:0015821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005093"],"is_obsolete":false,"name":"mycosis fungoides","secondary_identifiers":["UMLS:C0026948","MESH:D009182","DOID:8691","ONCOTREE:MYCF","NCIT:C3246","SCTID:118618005","icd11.foundation:901411509","ICDO:9700/3","GARD:3863","MEDGEN:7771","NORD:1479","EFO:1001051","ICD10CM:C84.0","MedDRA:10028483","ICD9:202.1","OMIM:254400"],"synonyms":[{"name":"Alibert-Bazin syndrome","type":"related"},{"name":"CTCL/ mycosis fungoides","type":"exact"},{"name":"MF","type":"exact"},{"name":"classic mycosis fungoides","type":"related"},{"name":"cutaneous T-cell lymphoma/mycosis fungoides","type":"exact"},{"name":"granuloma fungoides","type":"related"},{"name":"mycosis fungoides","type":"exact"},{"name":"mycosis fungoides (morphologic abnormality)","type":"exact"},{"name":"mycosis fungoides NOS (morphologic abnormality)","type":"exact"},{"name":"mycosis fungoides lymphoma","type":"exact"},{"name":"mycosis fungoides of unspecified site","type":"exact"},{"name":"mycosis fungoides, Alibert-Bazin type","type":"exact"},{"name":"mycosis fungoides, unspecified site, extranodal and solid organ sites","type":"exact"}],"termid":"MONDO:0009691","xrefs":{"Monarch":{"xref_id":"0009691"}}}


