# terms

id: PBO:0060922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 9","termid":"PBO:0060922"}


id: MONDO:0019186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection caused by Coxiella burnetii. It is transmitted to humans by the inhalation of infected air particles or contact with fluids and feces of infected animals. Signs and symptoms include the abrupt onset of fever, headache, myalgias, and weakness.","definition_xrefs":["NCIT:C34970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Q fever","secondary_identifiers":["MESH:D011778","ICD9:083.0","MedDRA:10037731","GARD:7515","MEDGEN:48290","Orphanet:781","ICD10CM:A78","DOID:11100","EFO:0005224","icd11.foundation:2113860626","NORD:1643","SCTID:186788009","UMLS:C0034362","MedDRA:10037688"],"synonyms":[{"name":"Coxiella burnetii caused disease or disorder","type":"exact"},{"name":"Coxiella burnetii disease or disorder","type":"exact"},{"name":"Coxiella burnetii fever","type":"related"},{"name":"Coxiella burnetii infectious disease","type":"exact"},{"name":"Coxiellosis","type":"exact"},{"name":"Q fever pneumonia","type":"related"},{"name":"infection due to Coxiella burnetii","type":"exact"},{"name":"nine Mile fever","type":"exact"},{"name":"quadrilateral fever","type":"exact"},{"name":"query fever","type":"exact"}],"termid":"MONDO:0019186","xrefs":{"Monarch":{"xref_id":"0019186"}}}


id: RO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure  (e.g.- a brain region) in which its dendrite receives synaptic input.\\n\\n\t","direct_ancestors":[{"relation_name":"is_a","term_name":"has_postsynaptic_terminal_in","termid":"RO:0002110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendrite_synapsed_in","termid":"RO:0002121"}


id: FYPO:0004665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which linear elements are absent from the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear elements present in decreased numbers","termid":"FYPO:0005986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"linear elements absent from cell","synonyms":[{"name":"absent linear elements","type":"exact"},{"name":"linear elements absent","type":"exact"}],"termid":"FYPO:0004665"}


id: PR:Q9UTC4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- reg1 gene.","definition_xrefs":["UniProtKB:Q9UTC4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C227.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.15","synonyms":[{"name":"Spom972h-reg1","type":"exact"}],"termid":"PR:Q9UTC4"}


id: GO:0051538
data:
  {"annotated_genes":["SJAG_04054","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59566,66174],"is_not":false,"summary":null,"term":"GO:0051538"}]},"cv_name":"molecular_function","definition":"Binding to a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing.","definition_xrefs":["PMID:15952888","GOC:ai","Wikipedia:Iron-sulfur_cluster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"3 iron, 4 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000043":null},"synonyms":[{"name":"3 Fe 4 S cluster binding","type":"exact"},{"name":"3 iron, 4 sulphur cluster binding","type":"exact"},{"name":"3Fe-4S cluster binding","type":"exact"},{"name":"iron-sulfur cluster 3Fe-4S binding","type":"exact"},{"name":"iron-sulphur cluster 3Fe-4S binding","type":"exact"},{"name":"triiron tetrasulfide cluster binding","type":"exact"},{"name":"triiron tetrasulphide cluster binding","type":"exact"}],"termid":"GO:0051538","terms_by_termid":{"GO:0051538":null}}


id: MONDO:0019974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postencephalitic parkinsonism (obsolete MONDO:0019974)","termid":"MONDO:0019974","xrefs":{"Monarch":{"xref_id":"0019974"}}}


id: MONDO:1011903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal amyloidosis, non-human animal","secondary_identifiers":["OMIA:000040"],"termid":"MONDO:1011903","xrefs":{"Monarch":{"xref_id":"1011903"}}}


id: PBO:0063712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 1","termid":"PBO:0063712"}


id: MONDO:0017338
data:
  {"annotated_genes":["SJAG_04016","SJAG_02397","SJAG_02306","SJAG_03701","SJAG_03641","SJAG_03222","SJAG_01147"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[85444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[85795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[85064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[85130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[85773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[86118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"}]},"cv_name":"mondo","definition":"Multiple mitochondrial dysfunctions syndrome describes a group of rare inborn errors of energy metabolism due to defects in mitochondrial [4Fe-4S] protein assembly. Patients present with a neonatal/infancy onset of metabolic lactic acidosis (that may be associated with hyperglycinemia and other abnormal metabolic testing results), muscular hypotonia, absence of psychomotor development or developmental regression, as well as abnormal neuroimaging findings (including leukodystrophy, brain developmental defects, white matter abnormalities, cerebral atrophy), and other variable clinical features (e.g., optic atrophy, cardiomyopathy, pulmonary hypertension, seizures, and dysmorphic features). Early fatal outcome is usual.","definition_xrefs":["Orphanet:289573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipoic acid biosynthesis defect","termid":"MONDO:0018424"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01147":null,"SJAG_02306":null,"SJAG_02397":null,"SJAG_03222":null,"SJAG_03641":null,"SJAG_03701":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0004069"],"is_obsolete":false,"name":"fatal multiple mitochondrial dysfunctions syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:720827002","MESH:C565304","MEDGEN:502474","OMIMPS:605711","UMLS:C3502075","GARD:12632","DOID:0070330"],"synonyms":[{"name":"MMDS","type":"related"},{"name":"fatal multiple mitochondrial dysfunction syndrome","type":"related"},{"name":"multiple mitochondrial dysfunctions syndrome","type":"exact"}],"termid":"MONDO:0017338","terms_by_termid":{"MONDO:0011582":null,"MONDO:0013675":null,"MONDO:0014132":null,"MONDO:0014611":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0957382":null},"xrefs":{"Monarch":{"xref_id":"0017338"}}}


id: GO:0101023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of blood vessel endothelial cells, resulting in the expansion of a cell population.","definition_xrefs":["PMID:23201774","GOC:BHF_telomere","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell proliferation","termid":"GO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell proliferation","termid":"GO:0101023"}


id: PBO:0013470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing protein Dbl6","termid":"PBO:0013470"}


id: PBO:0027634
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomeric_transcript_level","termid":"PBO:0027634"}


id: GO:0036179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an osteoclast cell to attain its fully functional state. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue, and which typically differentiates from monocytes.","definition_xrefs":["GOC:pg","CL:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"osteoclast development","termid":"GO:0036035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast maturation","synonyms":[{"name":"chondroclast maturation","type":"related"}],"termid":"GO:0036179"}


id: GO:0008780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-hydroxytetradecanoyl-[acyl-carrier protein] + UDP-N-acetylglucosamine = [acyl-carrier protein] + UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine.","definition_xrefs":["EC:2.3.1.129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity","secondary_identifiers":["MetaCyc:UDPNACETYLGLUCOSAMACYLTRANS-RXN","RHEA:13925"],"synonyms":[{"name":"(R)-3-hydroxytetradecanoyl-acyl-carrier-protein:UDP-N-acetylglucosamine 3-O-(3-hydroxytetradecanoyl)transferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine acyltransferase activity","type":"related"},{"name":"acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase activity","type":"exact"},{"name":"acyl-[acyl-carrier protein]-UDP-N-acetylglucosamine O-acyltransferase activity","type":"exact"},{"name":"acyl-acyl-carrier-protein-UDP-N-acetylglucosamine O-acyltransferase","type":"broad"},{"name":"uridine diphosphoacetylglucosamine acyltransferase activity","type":"related"}],"termid":"GO:0008780"}


id: PBO:0061351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 9","termid":"PBO:0061351"}


id: PBO:0040646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain adjacent to zinc finger domain 1B","termid":"PBO:0040646"}


id: MONDO:0958335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 1","termid":"MONDO:0019572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 1d","secondary_identifiers":["OMIM:620780","UMLS:C5935602","MEDGEN:1857168"],"termid":"MONDO:0958335","xrefs":{"Monarch":{"xref_id":"0958335"}}}


id: GO:0052416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont macromolecule (obsolete GO:0052416)","termid":"GO:0052416"}


id: GO:0019058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.","definition_xrefs":["ISBN:1555811272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral life cycle","secondary_identifiers":["Reactome:R-HSA-162588","Reactome:R-HSA-168255","GO:0019067","Reactome:R-HSA-9609646"],"synonyms":[{"name":"lytic viral life cycle","type":"related"},{"name":"viral assembly, maturation, egress, and release","type":"narrow"},{"name":"viral infectious cycle","type":"related"},{"name":"viral replication","type":"related"}],"termid":"GO:0019058"}


id: GO:0030062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the heteromeric enzymes, located in the mitochondrion, that act in the tricarboxylic acid (TCA) cycle.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial tricarboxylic acid cycle enzyme complex (obsolete GO:0030062)","synonyms":[{"name":"TCA cycle enzyme complex","type":"broad"}],"termid":"GO:0030062"}


id: GO:2000352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell apoptotic process.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of endothelial cell apoptotic process","termid":"GO:2000351"},{"relation_name":"negatively_regulates","term_name":"endothelial cell apoptotic process","termid":"GO:0072577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell apoptotic process","synonyms":[{"name":"negative regulation of apoptosis of endothelial cells","type":"exact"},{"name":"negative regulation of endothelial cell apoptosis","type":"narrow"},{"name":"negative regulation of endothelial cell programmed cell death by apoptosis","type":"exact"},{"name":"negative regulation of killing of endothelial cells","type":"exact"},{"name":"negative regulation of programmed cell death of endothelial cells by apoptosis","type":"exact"},{"name":"negative regulation of programmed cell death, endothelial cells","type":"exact"}],"termid":"GO:2000352"}


id: GO:0097133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D3 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin D3-CDK6 complex","termid":"GO:0097133"}


id: MONDO:0008966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholestasis-lymphedema syndrome is a rare genetic disorder characterized by neonatal intrahepatic cholestasis, often lessening and becoming intermittent with age, and severe chronic lymphedema which mainly affects the lower limbs. Patients often present with fat malabsorption leading to failure to thrive, fat soluble vitamin deficiency with bleeding, rickets, and neuropathy. In 25% of cases, cirrhosis occurs during childhood or later in life.","definition_xrefs":["Orphanet:1414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046","MONDO:0002515"],"is_obsolete":false,"name":"Aagenaes syndrome","secondary_identifiers":["OMIM:214900","GARD:370","ICD9:576.8","DOID:6691","MESH:C535330","NCIT:C35709","ICD10CM:Q82.0","SCTID:28724005","MEDGEN:78658","UMLS:C0268314"],"synonyms":[{"name":"Aagenaes syndrome","type":"exact"},{"name":"Chls","type":"related"},{"name":"LCS","type":"related"},{"name":"LCS1","type":"related"},{"name":"cholestasis lymphedema syndrome","type":"related"},{"name":"cholestasis-edema syndrome, Norwegian type","type":"exact"},{"name":"cholestasis-lymphedema syndrome","type":"related"},{"name":"lymphedema cholestasis syndrome","type":"related"},{"name":"lymphedema-cholestasis syndrome","type":"related"}],"termid":"MONDO:0008966","xrefs":{"Monarch":{"xref_id":"0008966"}}}


id: PBO:0058689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6817","termid":"PBO:0058689"}


id: GO:0039694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a viral RNA genome.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome replication","termid":"GO:0019079"},{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA genome replication","termid":"GO:0039694"}


id: FYPO:0002416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells in which cell shape is altered and cell volume is larger than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen cells, abnormal cell shape (obsolete FYPO:0002416)","synonyms":[{"name":"inviable microcolonies swollen misshapen cells","type":"related"},{"name":"inviable microcolony, enlarged vegetative cells with abnormal cell shape","type":"related"},{"name":"inviable microcolony, large vegetative cells with abnormal cell shape","type":"related"},{"name":"inviable microcolony, vegetative cells with increased cell size and abnormal cell shape","type":"related"},{"name":"inviable microcolony, vegetative cells with increased cell volume and abnormal cell shape","type":"exact"}],"termid":"FYPO:0002416"}


id: GO:0060650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mammary gland bud epithelial cells, resulting in the elongation of the bud.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"},{"relation_name":"part_of","term_name":"mammary gland bud elongation","termid":"GO:0060649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in mammary gland bud elongation","termid":"GO:0060650"}


id: GO:0044484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with fibrinolysis, a process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, in the bloodstream of the bitten/stung organism.","definition_xrefs":["GOC:fj","PMID:17433397","PMID:17544404","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation perturbing hemostasis","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in fibrinolysis","synonyms":[{"name":"envenomation resulting in fibrinolysis in another organism","type":"exact"},{"name":"envenomation resulting in fibrinolysis in other organism","type":"exact"}],"termid":"GO:0044484"}


id: MONDO:1010810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in turkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, turkey","secondary_identifiers":["OMIA:000810-9103"],"termid":"MONDO:1010810","xrefs":{"Monarch":{"xref_id":"1010810"}}}


id: PBO:0087894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription elongation factor with a conserved zinc finger domain; implicated in the maintenance of proper chromatin structure in actively transcribed regions; deletion inhibits Brome mosaic virus (BMV) gene expression","termid":"PBO:0087894"}


id: PBO:0045257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1 like 3","termid":"PBO:0045257"}


id: PBO:0084549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the REF (RNA and export factor binding proteins) family; when overexpressed, can substitute for the function of Yra1p in export of poly(A)+ mRNA from the nucleus","termid":"PBO:0084549"}


id: GO:0050856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050854"},{"relation_name":"regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of T cell receptor signaling pathway","synonyms":[{"name":"regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"regulation of T-cell receptor signalling pathway","type":"exact"},{"name":"regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"regulation of TCR signaling pathway","type":"exact"}],"termid":"GO:0050856"}


id: GO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of a male germ cell, a reproductive cell in males.","definition_xrefs":["GOC:mtg_sensu","CL:0000015","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell nucleus","termid":"GO:0043073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"male germ cell nucleus","secondary_identifiers":["GO:0043081"],"synonyms":[{"name":"male germ-cell nucleus","type":"exact"}],"termid":"GO:0001673"}


id: GO:0030929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses ADPG pyrophosphorylase activity. In all organisms where it has been found, the complex is a tetramer. In bacteria, it is a homotetramer. In plants, the complex is a heterotetramer composed small and large subunits.","definition_xrefs":["PMID:9680965","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ADPG pyrophosphorylase complex","termid":"GO:0030929"}


id: PBO:0089487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa6","termid":"PBO:0089487"}


id: GO:0032175
data:
  {"annotated_genes":["SJAG_00663","SJAG_03688","SJAG_04470","SJAG_01769"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94258,99867,105767,115709],"is_not":false,"summary":null,"term":"GO:0032175"}]},"cv_name":"cellular_component","definition":"A septin ring, i.e. a ring-shaped structure composed of septins and septin-associated proteins, located at the neck of a shmoo (mating projection). The septin ring in the neck of a shmoo may act as a barrier to localize mating factors in the shmoo tip.","definition_xrefs":["GOC:mah","GOC:krc","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01769":null,"SJAG_03688":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"mating projection septin ring","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032175","terms_by_termid":{"GO:0032175":null}}


id: PBO:0045036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispatched RND transporter family member 1","termid":"PBO:0045036"}


id: MONDO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A paralytic poliomyelitis in which the site of paralysis is the bulbospinal tract.","direct_ancestors":[{"relation_name":"is_a","term_name":"paralytic poliomyelitis","termid":"MONDO:0000341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"bulbospinal polio","secondary_identifiers":["DOID:0050514"],"termid":"MONDO:0000340","xrefs":{"Monarch":{"xref_id":"0000340"}}}


id: PR:Q9HGN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03260","PANTHER:PTHR12380:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE affecting a late Golgi compartment protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.07","secondary_identifiers":["UniProtKB:Q9HGN3"],"synonyms":[{"name":"Spom972h-STX6","type":"exact"},{"name":"syntaxin tlg1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGN3"}


id: PBO:0003564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase E3 Slx8 (predicted)","termid":"PBO:0003564"}


id: MOD:00426
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen atom on a sulfur with a carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"S-glycosylated residue","synonyms":[{"name":"SGlycoRes","type":"exact"}],"termid":"MOD:00426"}


id: PBO:0056370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 7","termid":"PBO:0056370"}


id: PBO:0075352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sosondowah ankyrin repeat domain family member C","termid":"PBO:0075352"}


id: PBO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH18 antisense RNA 1","termid":"PBO:0042499"}


id: GO:0010689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a chemical stimulus.","definition_xrefs":["GOC:dph","GOC:txnOH","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus","termid":"GO:0010689"}


id: SO:0001905
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is transcribed from the outer repeat region of a regional centromere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"regional_centromere_outer_repeat_region","termid":"SO:0001799"},{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere_outer_repeat_transcript","synonyms":[{"name":"centromere outer repeat transcript","type":"exact"},{"name":"regional centromere outer repeat region transcript","type":"exact"},{"name":"regional_centromere_outer_repeat_region_transcript","type":"exact"}],"termid":"SO:0001905"}


id: FYPO:0002410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, cell shape is altered, and cell size remains normal, and in which vacuoles are more visible (usually by microscopy) than normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"inviable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"inviable vacuolated vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"inviable vacuolated vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"inviable vegetative misshapen vacuolated cell","type":"related"},{"name":"inviable, vacuolated, abnormal cell shape, normal cell size during vegetative growth","type":"exact"},{"name":"lethal; vacuolated vegetative cell, abnormal cell shape, normal cell size","type":"exact"}],"termid":"FYPO:0002410"}


id: PATO:0002521
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a funnel.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"funnel-shaped","termid":"PATO:0002521"}


id: MONDO:0014847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the SYCE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 15","secondary_identifiers":["DOID:0070172","GARD:16173","MEDGEN:934746","OMIM:616950","UMLS:C4310779"],"synonyms":[{"name":"SPGF15","type":"exact"},{"name":"SYCE1 azoospermia","type":"exact"},{"name":"azoospermia caused by mutation in SYCE1","type":"exact"},{"name":"spermatogenic failure 15","type":"exact"},{"name":"spermatogenic failure 15; SPGF15","type":"exact"},{"name":"spermatogenic failure type 15","type":"exact"}],"termid":"MONDO:0014847","xrefs":{"Monarch":{"xref_id":"0014847"}}}


id: MONDO:0008580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toes, space between first and second","secondary_identifiers":["UMLS:C1861058","OMIM:189230","MEDGEN:348253"],"synonyms":[{"name":"toes, space between first and second","type":"exact"}],"termid":"MONDO:0008580","xrefs":{"Monarch":{"xref_id":"0008580"}}}


id: PBO:0045233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 1","termid":"PBO:0045233"}


id: PBO:0074212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 43 member 1","termid":"PBO:0074212"}


id: PBO:0025463
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage cardiomyopathy","termid":"PBO:0025463"}


id: MONDO:0007989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital microcoria is a rare autosomal dominant ophthalmological disease caused by maldevelopment of the dilator muscle of the pupil that is characterized by small pupils (<2 mm in diameter) from birth, peripheral iris hypopigmentation and transillumination defects leading to errors of refraction (myopia, astigmatism) and sometimes juvenile open angle glaucoma.","definition_xrefs":["Orphanet:566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridogoniodysgenesis","termid":"MONDO:0011119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital microcoria","secondary_identifiers":["GARD:3635","MEDGEN:227002","OMIM:156600","SCTID:400962005","UMLS:C1303009","MESH:C537550"],"synonyms":[{"name":"Mcor","type":"related"},{"name":"chromosome 13Q32 deletion syndrome","type":"related"},{"name":"congenital miosis","type":"exact"},{"name":"microcoria, congenital","type":"related"},{"name":"miosis, congenital","type":"related"},{"name":"pinhole pupils","type":"related"}],"termid":"MONDO:0007989","xrefs":{"Monarch":{"xref_id":"0007989"}}}


id: PBO:0011405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chemical,_gene_product,_complex,_cellular_component,_biological_process,_molecular_function,_modification_or_sequence_feature","termid":"PBO:0011405"}


id: MONDO:0010271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked myotubular myopathy-abnormal genitalia syndrome is a rare chromosomal anomaly, partial deletion of the long arm of chromosome X, characterized by a combination of clinical manifestations of X-linked myotubular myopathy and a 46,XY disorder of sex development. Patients present with severe form of congenital myopathy and abnormal male genitalia.","definition_xrefs":["Orphanet:456328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"X-linked myotubular myopathy","termid":"MONDO:0010683"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome X","termid":"MONDO:0017007"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"X-linked myotubular myopathy-abnormal genitalia syndrome","secondary_identifiers":["MEDGEN:335354","MESH:C564561","UMLS:C1846169","OMIM:300219","GARD:17792"],"synonyms":[{"name":"Xq28 contiguous gene deletion syndrome","type":"exact"},{"name":"myotubular myopathy with abnormal genital development","type":"related"}],"termid":"MONDO:0010271","xrefs":{"Monarch":{"xref_id":"0010271"}}}


id: PBO:0003090
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during G1-S phase","termid":"PBO:0003090"}


id: GO:0075236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of zoospore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of zoospore movement on or near host (obsolete GO:0075236)","termid":"GO:0075236"}


id: GO:0051881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}


id: PBO:0089883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Mms2","termid":"PBO:0089883"}


id: PBO:0059427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRTFA antisense RNA 1","termid":"PBO:0059427"}


id: MONDO:0010963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the WFS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 6","secondary_identifiers":["DOID:0110584","MEDGEN:331419","GARD:18101","MESH:C563421","OMIM:600965","UMLS:C1833021"],"synonyms":[{"name":"DFNA14","type":"narrow"},{"name":"DFNA38","type":"narrow"},{"name":"DFNA6","type":"narrow"},{"name":"WFS1 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 14","type":"narrow"},{"name":"autosomal dominant deafness 38","type":"narrow"},{"name":"autosomal dominant deafness 6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in WFS1","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 6","type":"narrow"},{"name":"deafness, autosomal dominant 14","type":"narrow"},{"name":"deafness, autosomal dominant 38","type":"narrow"},{"name":"deafness, autosomal dominant 6","type":"narrow"},{"name":"deafness, autosomal dominant 6/14/38","type":"narrow"},{"name":"deafness, autosomal dominant type 6","type":"narrow"}],"termid":"MONDO:0010963","xrefs":{"Monarch":{"xref_id":"0010963"}}}


id: FYPO:0001715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of succinate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal succinate import","synonyms":[{"name":"abnormal succinate import across plasma membrane","type":"exact"},{"name":"abnormal succinate import during mitotic cell cycle","type":"related"},{"name":"abnormal succinate import during vegetative growth","type":"exact"},{"name":"abnormal succinate import into cell","type":"exact"},{"name":"abnormal succinate uptake","type":"exact"},{"name":"abnormal succinic acid import","type":"related"}],"termid":"FYPO:0001715"}


id: PBO:0070426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 4","termid":"PBO:0070426"}


id: PBO:0056517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 4","termid":"PBO:0056517"}


id: MONDO:0957458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatomyositis","termid":"MONDO:0016367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"adermatopathic dermatomyositis","secondary_identifiers":["Orphanet:645626","UMLS:C5816708","MEDGEN:1843427"],"termid":"MONDO:0957458","xrefs":{"Monarch":{"xref_id":"0957458"}}}


id: MONDO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Prunus armeniaca.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete apricot allergy (obsolete MONDO:0000780)","secondary_identifiers":["DOID:0060505"],"synonyms":[{"name":"Prunus armeniaca allergic disease","type":"exact"},{"name":"Prunus armeniaca caused allergic disease","type":"exact"},{"name":"Prunus armeniaca fruit allergy","type":"exact"},{"name":"allergy of Prunus armeniaca","type":"exact"}],"termid":"MONDO:0000780","xrefs":{"Monarch":{"xref_id":"0000780"}}}


id: MOD:00336
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-aspartic acid residue and a two-iron two-sulfur cluster to tris-L-cysteinyl L-aspartato diiron disulfide.","definition_xrefs":["RESID:AA0331","PubMed:7947772","PubMed:10968624","PubMed:1312028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-aspartato diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"di-mu-sulfido(bis-S-cysteinyliron)(S-cysteinyl-O4-aspartatoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-aspartato diiron disulfide","type":"exact"}],"termid":"MOD:00336"}


id: FYPO:0002103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has one nucleus and one septum, and is swollen and inviable. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell","termid":"FYPO:0002414"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0005447","FYPO:0000004","FYPO:0000337","FYPO:0000631","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable swollen mononucleate monoseptate vegetative cell","synonyms":[{"name":"inviable enlarged mononucleate monoseptate vegetative cell","type":"exact"},{"name":"inviable large mononucleate monoseptate vegetative cell","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with increased cell volume","type":"exact"},{"name":"inviable swollen mononucleate monoseptate cell","type":"exact"},{"name":"inviable swollen mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"inviable swollen mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; swollen mononucleate monoseptate vegetative cell","type":"exact"}],"termid":"FYPO:0002103"}


id: PBO:0062816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 10","termid":"PBO:0062816"}


id: PBO:0041858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 4 like, pseudogene","termid":"PBO:0041858"}


id: PBO:0036040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_SRP-dependent_cotranslational_protein_targeting_to_membrane_during_vegetative_growth","termid":"PBO:0036040"}


id: SO:0001688
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary at which a restriction enzyme breaks the nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_cleavage_site","termid":"SO:0002204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_cleavage_junction","synonyms":[{"name":"restriction enzyme cleavage junction","type":"exact"}],"termid":"SO:0001688"}


id: MONDO:0006613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stromal pigmentation such as that in ochronosis results from chronic irritation. The melanin is in the superficial stroma and the basal layer of the corneal epithelium.","definition_xrefs":["EFO:1000770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal deposit","termid":"MONDO:0001308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"stromal corneal pigmentation","secondary_identifiers":["ICD9:371.12","MEDGEN:509791","UMLS:C0155105","SCTID:55031000","DOID:12311"],"synonyms":[{"name":"stromal corneal pigmentations","type":"exact"}],"termid":"MONDO:0006613","xrefs":{"Monarch":{"xref_id":"0006613"}}}


id: PBO:0070459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 2","termid":"PBO:0070459"}


id: GO:1901077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of muscle","termid":"GO:1901077"}


id: FYPO:0005872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the septum is in two asymmetrically located parts and does not completely bisect the cell. Arises when septum assembly begins at two sites which are not on opposite sides of the medial cortex and terminates prematurely on both sides.","definition_xrefs":["PMID:27898700","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000631"],"is_obsolete":false,"name":"incomplete septum formed from asymmetrically located sites","synonyms":[{"name":"abnormal septum site selection from asymmetrically located sites, forming incomplete septum","type":"related"},{"name":"incomplete division septum formed from asymmetrically located sites","type":"exact"},{"name":"incomplete septum formed from asymmetrically located sites during mitotic cell cycle","type":"related"},{"name":"incomplete septum formed from asymmetrically located sites during vegetative growth","type":"exact"}],"termid":"FYPO:0005872"}


id: PBO:0048920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member Q","termid":"PBO:0048920"}


id: MONDO:0006623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune pancreatitis type 1 (obsolete MONDO:0006623)","termid":"MONDO:0006623","xrefs":{"Monarch":{"xref_id":"0006623"}}}


id: PR:O74545
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase C777.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.06c","synonyms":[{"name":"Spom972h-SPCC777.06c","type":"exact"}],"termid":"PR:O74545"}


id: FYPO:0001491
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119023,119022,119026,119068],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"},{"annotations":[118848,118853,118859,118885],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[119024,119025,119031],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetatively growing cell is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02013":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":9,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"viable vegetative cell","references_by_uniquename":{"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02819","SJAG_03048","SJAG_03453","SJAG_03581","SJAG_04280","SJAG_01794","SJAG_02013","SJAG_00514"],"single_locus_genotype_uniquenames":["ras1delta","efc25delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","gef1delta","scd2delta","pyp1delta","scd1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"viable cell during vegetative growth","type":"exact"},{"name":"viable vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001491","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0018476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia-aphonia syndrome","secondary_identifiers":["MEDGEN:1675660","UMLS:C5190573","GARD:21739","Orphanet:412217"],"termid":"MONDO:0018476","xrefs":{"Monarch":{"xref_id":"0018476"}}}


id: GO:0044313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K6-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 6 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K6-linked deubiquitination","termid":"GO:0044313"}


id: MONDO:0014328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GABRA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Dravet syndrome","termid":"MONDO:0100135"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 19","secondary_identifiers":["UMLS:C3810400","MEDGEN:816730","NCIT:C142802","GARD:16008","OMIM:615744","DOID:0080431"],"synonyms":[{"name":"DEE19","type":"exact"},{"name":"EIEE19","type":"exact"},{"name":"Early Infantile epileptic encephalopathy 19","type":"exact"},{"name":"GABRA1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 19","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GABRA1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 19","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 19","type":"exact"}],"termid":"MONDO:0014328","xrefs":{"Monarch":{"xref_id":"0014328"}}}


id: FYECO:0000356
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which CK-666 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CK-666","synonyms":[{"name":"+ CK666","type":"exact"}],"termid":"FYECO:0000356"}


id: GO:0140226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transient cleavage and passage of individual RNA strands or double helices through one another, resulting a topological transformation in RNA.","definition_xrefs":["PMID:23912945","GOC:lnp","PMID:27257063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid conformation isomerase activity","termid":"GO:0120545"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"RNA topoisomerase activity","termid":"GO:0140226"}


id: PBO:0091057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L54","termid":"PBO:0091057"}


id: MONDO:0015069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the anal canal.","definition_xrefs":["NCIT:C96540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anal canal neuroendocrine neoplasm","termid":"MONDO:0003504"},{"relation_name":"is_a","term_name":"rectal neuroendocrine tumor","termid":"MONDO:0015068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"neuroendocrine tumor of the anal canal","secondary_identifiers":["Orphanet:100082","GARD:19757","icd11.foundation:1927831331","UMLS:C3272849","MEDGEN:474482"],"synonyms":[{"name":"NET of anal canal","type":"exact"},{"name":"NET of the anal canal","type":"exact"},{"name":"anal NET","type":"exact"},{"name":"anal Neuroendocrine tumor","type":"exact"},{"name":"anal Neuroendocrine tumour","type":"exact"},{"name":"anal canal NET","type":"exact"},{"name":"anal canal neuroendocrine neoplasm","type":"broad"},{"name":"anal canal neuroendocrine tumor","type":"exact"},{"name":"anal canal neuroendocrine tumour","type":"exact"},{"name":"anal canal well differentiated tumor","type":"exact"},{"name":"anal canal well differentiated tumor/carcinoma","type":"exact"},{"name":"anal canal well differentiated tumour","type":"exact"},{"name":"neuroendocrine neoplasm of the anal canal","type":"exact"},{"name":"neuroendocrine tumor of anal canal","type":"related"},{"name":"neuroendocrine tumour of anal canal","type":"related"}],"termid":"MONDO:0015069","xrefs":{"Monarch":{"xref_id":"0015069"}}}


id: _global:reciprocal_of
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal_of","termid":"_global:reciprocal_of"}


id: PBO:0074927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 95","termid":"PBO:0074927"}


id: PBO:0048546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor, augmenter of liver regeneration","termid":"PBO:0048546"}


id: GO:0015798
data:
  {"annotated_genes":["SJAG_03595","SJAG_04506"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71898,72719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"}]},"cv_name":"biological_process","definition":"The directed movement of myo-inositol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Myo-inositol is 1,2,3,4,5/4,6-cyclohexanehexol, a growth factor for animals and microorganisms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"myo-inositol transport","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-429593"],"synonyms":[{"name":"vitamin Bh transport","type":"exact"}],"termid":"GO:0015798","terms_by_termid":{"GO:1904679":null}}


id: MONDO:0012181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary spastic paraplegia that has material basis in variation in the chromosome region 10q22.1-q24.1.","definition_xrefs":["DOID:0110778","PMID:15455396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 27","secondary_identifiers":["UMLS:C1836899","MESH:C563807","MEDGEN:373203","OMIM:609041","Orphanet:101007","GARD:16940"],"synonyms":[{"name":"SPG27","type":"exact"},{"name":"autosomal recessive spastic paraplegia 27","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 27","type":"exact"},{"name":"hereditary spastic paraplegia type 27","type":"exact"},{"name":"spastic paraplegia 27, autosomal recessive","type":"related"}],"termid":"MONDO:0012181","xrefs":{"Monarch":{"xref_id":"0012181"}}}


id: PBO:0043923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 2","termid":"PBO:0043923"}


id: PBO:0029215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_wall","termid":"PBO:0029215"}


id: PBO:0063214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCCA divergent transcript","termid":"PBO:0063214"}


id: GO:0060409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"positively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acetylcholine metabolic process","termid":"GO:0060409"}


id: MONDO:0009373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Seizures-intellectual disability due to hydroxylysinuria syndrome is characterized by hydroxylysinuria, myoclonic and motor seizures and intellectual deficit. It has been described in a brother and sister born to consanguineous parents and in one unrelated patient.","definition_xrefs":["Orphanet:79156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of lysine and hydroxylysine metabolism","termid":"MONDO:0017351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"seizures-intellectual disability due to hydroxylysinuria syndrome","secondary_identifiers":["MESH:C565502","UMLS:C1855986","OMIM:236900","MEDGEN:343450","GARD:16709"],"synonyms":[{"name":"hydroxylysinuria","type":"related"}],"termid":"MONDO:0009373","xrefs":{"Monarch":{"xref_id":"0009373"}}}


id: PBO:0040847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 2","termid":"PBO:0040847"}


id: MONDO:0009590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metachromatic leukodystrophy","termid":"MONDO:0018868"},{"relation_name":"is_a","term_name":"PSAP-related sphingolipidosis","termid":"MONDO:0100517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005066","MONDO:0002525","MONDO:0005244","MONDO:0005559","MONDO:0002561"],"is_obsolete":false,"name":"metachromatic leukodystrophy due to saposin B deficiency","secondary_identifiers":["UMLS:C0268262","SCTID:297278001","GARD:10674","OMIM:249900","SCTID:68390005","SCTID:1003375005","MESH:C562609","MEDGEN:120624","NANDO:2201205","NANDO:1200082"],"synonyms":[{"name":"metachromatic leukodystrophy due to cerebroside sulfatase activator deficiency","type":"related"},{"name":"metachromatic leukodystrophy due to sap-B deficiency","type":"exact"},{"name":"metachromatic leukodystrophy due to saposin b deficiency","type":"exact"},{"name":"saposin B deficiency","type":"related"}],"termid":"MONDO:0009590","xrefs":{"Monarch":{"xref_id":"0009590"}}}


id: MONDO:0012237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the KBTBD13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset nemaline myopathy","termid":"MONDO:0015738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"nemaline myopathy 6","secondary_identifiers":["GARD:15452","MESH:C538398","OMIM:609273","UMLS:C1836472","DOID:0110935","MEDGEN:373095"],"synonyms":[{"name":"KBTBD13 nemaline myopathy","type":"exact"},{"name":"NEM6","type":"related"},{"name":"nemaline myopathy 6","type":"exact"},{"name":"nemaline myopathy 6, autosomal dominant","type":"exact"},{"name":"nemaline myopathy caused by mutation in KBTBD13","type":"exact"},{"name":"nemaline myopathy type 6","type":"exact"}],"termid":"MONDO:0012237","xrefs":{"Monarch":{"xref_id":"0012237"}}}


id: MONDO:0008131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy plus syndrome","termid":"MONDO:0014720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"optic atrophy, hearing loss, and peripheral neuropathy, autosomal dominant","secondary_identifiers":["OMIM:165199","UMLS:C1833831","MESH:C563497","GARD:402","MEDGEN:331597"],"synonyms":[{"name":"optic atrophy, hearing loss, and peripheral neuropathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0008131","xrefs":{"Monarch":{"xref_id":"0008131"}}}


id: PBO:0044193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin B","termid":"PBO:0044193"}


id: PBO:0033768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_pole_body_duplication","termid":"PBO:0033768"}


id: PBO:0067532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 676, pseudogene","termid":"PBO:0067532"}


id: PBO:0043892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIM1 divergent transcript","termid":"PBO:0043892"}


id: MONDO:0016618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatoid factor-negative juvenile idiopathic arthritis","termid":"MONDO:0019432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid factor-negative juvenile idiopathic arthritis without anti-nuclear antibodies","secondary_identifiers":["Orphanet:247861"],"synonyms":[{"name":"juvenile rheumatoid factor-negative polyarthritis without anti-nuclear antibodies","type":"exact"},{"name":"polyarthritis without rheumatoid factor without anti-nuclear antibodies","type":"exact"},{"name":"rheumatoid factor-negative JIA without anti-nuclear antibodies","type":"exact"}],"termid":"MONDO:0016618","xrefs":{"Monarch":{"xref_id":"0016618"}}}


id: PBO:0031425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phenotype","termid":"PBO:0031425"}


id: PBO:0079306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 3","termid":"PBO:0079306"}


id: GO:0032020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent addition to a protein of ISG15, a ubiquitin-like protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"ISG15-protein conjugation","termid":"GO:0032020"}


id: PBO:0051526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor like 2","termid":"PBO:0051526"}


id: PBO:0079949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 3","termid":"PBO:0079949"}


id: MONDO:0004875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholecystitis that is characterized by nodules containing lipid.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystitis","termid":"MONDO:0002155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"xanthogranulomatous cholecystitis","secondary_identifiers":["icd11.foundation:294033251","NCIT:C35792","SCTID:448286002","MESH:C536762","UMLS:C1337035","DOID:9766","MEDGEN:235004"],"synonyms":[{"name":"CX","type":"related"}],"termid":"MONDO:0004875","xrefs":{"Monarch":{"xref_id":"0004875"}}}


id: PBO:0042610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 10","termid":"PBO:0042610"}


id: PBO:0058432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4802","termid":"PBO:0058432"}


id: MONDO:0011068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus in which the cause of the disease is a mutation in the CTLA4 gene.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 12","secondary_identifiers":["DOID:0110751","MEDGEN:318618","MESH:C563326","OMIM:601388","UMLS:C1832392"],"synonyms":[{"name":"CTLA4 type 1 diabetes mellitus","type":"exact"},{"name":"IDDM12","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 12","type":"related"},{"name":"diabetes mellitus, insulin-dependent, type 12","type":"exact"},{"name":"insulin-dependent diabetes mellitus 12","type":"exact"},{"name":"type 1 diabetes mellitus caused by mutation in CTLA4","type":"exact"}],"termid":"MONDO:0011068","xrefs":{"Monarch":{"xref_id":"0011068"}}}


id: MONDO:0004158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic epithelial neoplasm characterized by the presence of columnar mucin-producing epithelial cells, ovarian-type stroma formation, and a focal or extensive invasive carcinomatous component.","definition_xrefs":["NCIT:C41246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic mucinous cystadenocarcinoma","termid":"MONDO:0004156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic mucinous-cystic neoplasm with an associated invasive carcinoma","secondary_identifiers":["DOID:7236","MEDGEN:309550","UMLS:C1518870","ICDO:8470/3"],"synonyms":[{"name":"pancreatic invasive mucinous cystadenocarcinoma","type":"exact"},{"name":"pancreatic mucinous cystic neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"pancreatic mucinous-cystic neoplasm with an associated invasive carcinoma","type":"exact"}],"termid":"MONDO:0004158","xrefs":{"Monarch":{"xref_id":"0004158"}}}


id: GO:0009353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrial complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2) within the mitochondrial matrix.","definition_xrefs":["PMID:10848975","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxoglutarate dehydrogenase complex (obsolete GO:0009353)","termid":"GO:0009353"}


id: PBO:0059870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 8","termid":"PBO:0059870"}


id: PBO:0055302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2729","termid":"PBO:0055302"}


id: PBO:0049012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol specific phospholipase D1","termid":"PBO:0049012"}


id: MOD:02000
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-retinylidene-L-lysine (unspecified geometric isomer).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-retinylidene-L-lysine (unspecified geometric isomer)","synonyms":[{"name":"(2S)-2-amino-6-[3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)-2,4,6,8-nonatetraenylidene]aminohexanoic acid","type":"exact"}],"termid":"MOD:02000"}


id: GO:0050449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = casbene + diphosphate.","definition_xrefs":["EC:4.2.3.8","RHEA:14901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"casbene synthase activity","secondary_identifiers":["KEGG_REACTION:R02064","MetaCyc:CASBENE-SYNTHASE-RXN"],"synonyms":[{"name":"casbene synthetase activity","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing)","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing, casbene-forming)","type":"related"}],"termid":"GO:0050449"}


id: PBO:0082706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; forms a subcomplex with Mic10p and Mic27p whose assembly and stability requires cardiolipin","termid":"PBO:0082706"}


id: MONDO:0957423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypophysitis","termid":"MONDO:0021156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunotherapy induced hypophysitis","secondary_identifiers":["Orphanet:641350","UMLS:C5816794","MEDGEN:1843401"],"termid":"MONDO:0957423","xrefs":{"Monarch":{"xref_id":"0957423"}}}


id: GO:0061949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the discharge, by sperm, of a single, anterior secretory granule before the sperm reaches to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents.","definition_xrefs":["PMID:23430248","PMID:22228629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"premature acrosome loss","termid":"GO:0061948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of premature acrosome loss","termid":"GO:0061949"}


id: PBO:0072652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 5","termid":"PBO:0072652"}


id: PATO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular quality inhering in a bearer by virtue of the bearer's having two sides have the same length.","definition_xrefs":["PATOC:JB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isosceles triangular","termid":"PATO:0002307"}


id: MONDO:0100335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to a local anesthetic.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"local anesthetic poisoning","synonyms":[{"name":"local anesthetic poisoning","type":"exact"}],"termid":"MONDO:0100335","xrefs":{"Monarch":{"xref_id":"0100335"}}}


id: FYPO:0001105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which catalase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal catalase activity","termid":"FYPO:0001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished catalase activity","synonyms":[{"name":"catalase activity abolished","type":"exact"}],"termid":"FYPO:0001105"}


id: GO:0009763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of C4 photosynthesis, as it occurs in plants in which the enzyme decarboxylating C4 acids in the bundle sheath is NAD-malic enzyme.","definition_xrefs":["PMID:11788762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4 photosynthesis","termid":"GO:0009760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"NAD-malic enzyme C4 photosynthesis","termid":"GO:0009763"}


id: PBO:0074902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 74B","termid":"PBO:0074902"}


id: PBO:0005156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin independence factor Cif1","termid":"PBO:0005156"}


id: PBO:0067577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 734, pseudogene","termid":"PBO:0067577"}


id: GO:0031844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 4 neuropeptide Y receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor binding","termid":"GO:0031841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 4 neuropeptide Y receptor binding","synonyms":[{"name":"pancreatic polypeptide receptor binding","type":"exact"},{"name":"type 4 neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031844"}


id: PBO:0043931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRPPA antisense RNA 1","termid":"PBO:0043931"}


id: MONDO:0014282
data:
  {"annotated_genes":["SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85400],"is_not":false,"summary":null,"term":"MONDO:0014282"}]},"cv_name":"mondo","definition":"Any pure hereditary spastic paraplegia in which the cause of the disease is a mutation in the REEP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 72","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110817","MEDGEN:1847422","OMIM:615625","Orphanet:401849","GARD:17660","UMLS:C5882669"],"synonyms":[{"name":"REEP2 pure hereditary spastic paraplegia","type":"exact"},{"name":"SPG72","type":"exact"},{"name":"autosomal spastic paraplegia type 72","type":"exact"},{"name":"hereditary spastic paraplegia type 72","type":"exact"},{"name":"pure hereditary spastic paraplegia caused by mutation in REEP2","type":"exact"},{"name":"spastic paraplegia 72, autosomal dominant","type":"narrow"},{"name":"spastic paraplegia 72, autosomal recessive","type":"narrow"}],"termid":"MONDO:0014282","terms_by_termid":{"MONDO:0014282":null},"xrefs":{"Monarch":{"xref_id":"0014282"}}}


id: PBO:0088696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein","termid":"PBO:0088696"}


id: GO:0035654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a macromolecular complex between proteins of the AP-3 adaptor complex and proteins and/or lipoproteins that are going to be transported by a clathrin-coated vesicle. In some cases, the AP-3 complex is a heterotetrameric AP-type membrane coat adaptor complex that, in some organisms, links clathrin to the membrane surface of a vesicle.","definition_xrefs":["PMID:16162817","GOC:lb","PMID:12802059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle cargo loading","termid":"GO:0035652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"clathrin-coated vesicle cargo loading, AP-3-mediated","synonyms":[{"name":"cargo loading into clathrin-coated vesicle, AP-3-mediated","type":"exact"}],"termid":"GO:0035654"}


id: MONDO:0025511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of neuroendocrine neoplasm that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"gene_count":0,"genotype_count":0,"name":"obsolete inherited neuroendocrine tumor (obsolete MONDO:0025511)","secondary_identifiers":["Orphanet:271847"],"synonyms":[{"name":"genetic neuroendocrine tumor","type":"related"},{"name":"genetic neuroendocrine tumour","type":"related"},{"name":"hereditary neuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0025511","xrefs":{"Monarch":{"xref_id":"0025511"}}}


id: PBO:0026729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_translation_in_response_to_stress_during_vegetative_growth","termid":"PBO:0026729"}


id: PBO:0055860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 6","termid":"PBO:0055860"}


id: MONDO:0003589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant adipose tissue neoplasm of the ovary.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sarcoma","termid":"MONDO:0002225"},{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"liposarcoma of the ovary","secondary_identifiers":["MEDGEN:233808","NCIT:C6419","UMLS:C1335165","DOID:5697"],"synonyms":[{"name":"liposarcoma of ovary","type":"exact"},{"name":"ovarian liposarcoma","type":"exact"},{"name":"ovary liposarcoma","type":"exact"}],"termid":"MONDO:0003589","xrefs":{"Monarch":{"xref_id":"0003589"}}}


id: PBO:0058439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5003","termid":"PBO:0058439"}


id: PBO:0061534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMDA receptor synaptonuclear signaling and neuronal migration factor","termid":"PBO:0061534"}


id: MONDO:0800402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the TRPM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"TRPM1-related retinopathy","termid":"MONDO:0800402","xrefs":{"Monarch":{"xref_id":"0800402"}}}


id: PBO:0042958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 3","termid":"PBO:0042958"}


id: MONDO:0019830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital anomaly of the inferior vena cava","secondary_identifiers":["ICD9:747.49","Orphanet:95499","UMLS:C0265932","GARD:19276","MEDGEN:539592","SCTID:81577001"],"synonyms":[{"name":"congenital anomaly of the IVC","type":"exact"},{"name":"congenital anomaly of the inferior caval vein","type":"exact"}],"termid":"MONDO:0019830","xrefs":{"Monarch":{"xref_id":"0019830"}}}


id: FYPO:0001900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cytoplasmic mRNA processing bodies (P-bodies) are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small P-bodies","synonyms":[{"name":"decreased P-body formation","type":"related"},{"name":"small P bodies","type":"exact"},{"name":"small P-body","type":"exact"},{"name":"small cytoplasmic mRNA processing bodies","type":"exact"}],"termid":"FYPO:0001900"}


id: PBO:0078792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 15-1","termid":"PBO:0078792"}


id: PBO:0058580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6529","termid":"PBO:0058580"}


id: GO:0018246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a linkage between a protein amino acid and coenzyme A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-coenzyme A linkage","termid":"GO:0018246"}


id: GO:0010212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.","definition_xrefs":["PMID:12509526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to radiation","termid":"GO:0009314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ionizing radiation","synonyms":[{"name":"response to ionising radiation","type":"exact"},{"name":"response to ionizing radiation stimulus","type":"exact"}],"termid":"GO:0010212"}


id: PBO:0079457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyl transferase 4","termid":"PBO:0079457"}


id: GO:0120502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (omega-1)-ethyl fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an (omega-1)-hydroxy fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:44548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"fatty acid omega-1 hydroxylase activity","termid":"GO:0120502"}


id: PBO:0047341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 2","termid":"PBO:0047341"}


id: PBO:0036240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nrd1 complex poly(A) binding protein Nab3 (predicted)","termid":"PBO:0036240"}


id: PBO:0058040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4261","termid":"PBO:0058040"}


id: PR:O60135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lcf1 gene.","definition_xrefs":["UniProtKB:O60135","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid--CoA ligase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.02","synonyms":[{"name":"Spom972h-lcf1","type":"exact"},{"name":"fatty acid activator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"long-chain acyl-CoA synthetase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60135"}


id: GO:0052191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host phagocytosis (obsolete GO:0052191)","synonyms":[{"name":"activation by symbiont of host phagocytosis","type":"narrow"},{"name":"stimulation by symbiont of host phagocytosis","type":"narrow"},{"name":"up regulation by symbiont of host phagocytosis","type":"exact"},{"name":"up-regulation by symbiont of host phagocytosis","type":"exact"},{"name":"upregulation by symbiont of host phagocytosis","type":"exact"}],"termid":"GO:0052191"}


id: PBO:0045363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 3","termid":"PBO:0045363"}


id: GO:0090556
data:
  {"annotated_genes":["SJAG_05209","SJAG_02897","SJAG_01731","SJAG_03076","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94192,97690,99243,101172,112248],"is_not":false,"summary":null,"term":"GO:0090556"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylserine from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:20224745","GOC:ab","PMID:16452632","RHEA:38567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_03076":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylserine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATPase-coupled phosphatidylserine transporter activity","type":"broad"},{"name":"ATPase-dependent phosphatidylserine transporter activity","type":"broad"},{"name":"phosphatidylserine floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"},{"name":"phosphatidylserine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090556","terms_by_termid":{"GO:0090556":null}}


id: PR:Q10331
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup107 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13003:SF2","PRO:DNx","OMA:SCHPO02455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup107 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.01c","secondary_identifiers":["UniProtKB:Q10331"],"synonyms":[{"name":"Spom972h-NUP107","type":"exact"},{"name":"nuclear pore protein nup107 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10331"}


id: MONDO:0004165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dysgammaglobulinemia characterized by low or undetectable serum levels of immunoglobulin class D (IgD). It is an uncommon primary antibody deficiency. It is most likely an inherited immunodeficiency. It may be caused by decreased or inefficient production of IgD from progenitor B cells without any corresponding decreases in the other isotypes. Most affected persons are asymptomatic and do not appear to be at increased risk for infection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selective immunoglobulin deficiency disease","termid":"MONDO:0003739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"selective IgD deficiency disease","secondary_identifiers":["DOID:7263","MEDGEN:96021","UMLS:C0398695","SCTID:234541006","NCIT:C27144","ICD9:279.03"],"synonyms":[{"name":"selective IgD immunodeficiency","type":"exact"},{"name":"selective immunoglobulin D deficiency","type":"exact"}],"termid":"MONDO:0004165","xrefs":{"Monarch":{"xref_id":"0004165"}}}


id: PBO:0043199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase B pseudogene 1","termid":"PBO:0043199"}


id: MONDO:1010663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune thrombocytopenic purpura that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thrombocytopenic purpura, non-human animal","termid":"MONDO:1010081"},{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia, dog","termid":"MONDO:1010625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thrombocytopenic purpura, dog","secondary_identifiers":["OMIA:001104-9615"],"termid":"MONDO:1010663","xrefs":{"Monarch":{"xref_id":"1010663"}}}


id: PR:P30821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A flavoprotein wrbA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00863","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P25 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.14c","secondary_identifiers":["UniProtKB:P30821"],"synonyms":[{"name":"Spom972h-wrbA","type":"exact"},{"name":"brefeldin A resistance protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30821"}


id: PBO:0003379
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.99.7","termid":"PBO:0003379"}


id: PBO:0040459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase cation transporting 13A2","termid":"PBO:0040459"}


id: PBO:0028593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_heat","termid":"PBO:0028593"}


id: MONDO:0005881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lower than normal quantity of amniotic fluid in the amniotic sac as compared to normal values. Typically associated with an amniotic fluid index (AFI) of less than 5 cm or a single maximum vertical pocket (MVP) of less than 2 cm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligohydramnios","secondary_identifiers":["ICD9:658.0","SCTID:59566000","MESH:D016104","HP:0001562","icd11.foundation:262953341","UMLS:C0079924","ICD9:658.00","DOID:12215","EFO:0007401","MEDGEN:86974"],"synonyms":[{"name":"antepartum oligohydramnios","type":"exact"},{"name":"delivered oligohydramnios","type":"exact"},{"name":"oligohydramnios","type":"exact"},{"name":"oligohydramnios (disease)","type":"exact"},{"name":"oligohydramnios - delivered","type":"exact"}],"termid":"MONDO:0005881","xrefs":{"Monarch":{"xref_id":"0005881"}}}


id: MONDO:0006318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nevus of Ito (obsolete MONDO:0006318)","termid":"MONDO:0006318","xrefs":{"Monarch":{"xref_id":"0006318"}}}


id: PBO:0113757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, OB fold, predicted role in DNA metabolism","termid":"PBO:0113757"}


id: MONDO:1011697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophagocytic syndrome, non-human animal","secondary_identifiers":["OMIA:001229"],"termid":"MONDO:1011697","xrefs":{"Monarch":{"xref_id":"1011697"}}}


id: PBO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0018059"}


id: PBO:0066114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras interacting protein 1","termid":"PBO:0066114"}


id: GO:0010075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"part_of","term_name":"meristem maintenance","termid":"GO:0010073"},{"relation_name":"regulates","term_name":"meristem growth","termid":"GO:0035266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem growth","synonyms":[{"name":"regulation of meristem size","type":"exact"}],"termid":"GO:0010075"}


id: PBO:0048505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDF5 antisense RNA 1","termid":"PBO:0048505"}


id: PBO:0043877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 5","termid":"PBO:0043877"}


id: PBO:0055724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin tail domain containing 1","termid":"PBO:0055724"}


id: PBO:0075819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 3","termid":"PBO:0075819"}


id: MONDO:0014078
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84927],"is_not":false,"summary":null,"term":"MONDO:0014078"}]},"cv_name":"mondo","definition":"Any inherited bleeding disorder, platelet-type in which the cause of the disease is a mutation in the ACTN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"autosomal dominant macrothrombocytopenia","termid":"MONDO:0015372"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111053","GARD:18272","UMLS:C3554663","MEDGEN:767577","NANDO:2200665","OMIM:615193"],"synonyms":[{"name":"ACTN1 inherited bleeding disorder, platelet-type","type":"exact"},{"name":"BDPLT15","type":"exact"},{"name":"autosomal dominant macrothrombocytopenia ACTN1-related","type":"exact"},{"name":"bleeding disorder, platelet-type, 15","type":"related"},{"name":"inherited bleeding disorder, platelet-type caused by mutation in ACTN1","type":"exact"},{"name":"macrothrombocytopenia, autosomal dominant, ACTN1-related","type":"related"},{"name":"platelet-type bleeding disorder 15","type":"exact"}],"termid":"MONDO:0014078","terms_by_termid":{"MONDO:0014078":null},"xrefs":{"Monarch":{"xref_id":"0014078"}}}


id: PBO:0065493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 2","termid":"PBO:0065493"}


id: PBO:0088875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol dehydrogenase His2","termid":"PBO:0088875"}


id: FYPO:0006531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype which protein degradation begins later than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein degradation during meiosis","synonyms":[{"name":"delayed onset of protein breakdown during meiosis","type":"exact"},{"name":"delayed onset of protein catabolic process during meiosis","type":"exact"},{"name":"delayed onset of protein catabolism during meiosis","type":"exact"},{"name":"delayed onset of protein degradation during meiotic nuclear division","type":"exact"},{"name":"delayed protein degradation during meiosis","type":"exact"}],"termid":"FYPO:0006531"}


id: PBO:0081326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 117","termid":"PBO:0081326"}


id: PATO:0000556
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000556 thermoinsensitive (obsolete PATO:0000556)","synonyms":[{"name":"thermoresistant","type":"related"}],"termid":"PATO:0000556"}


id: PBO:0108950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOPL pseudogene 2","termid":"PBO:0108950"}


id: PBO:0040952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 23","termid":"PBO:0040952"}


id: GO:0044501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in a signal transduction process - a cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell - in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of signal transduction in another organism (obsolete GO:0044501)","synonyms":[{"name":"modulation of signal transduction in another organism","type":"exact"},{"name":"modulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044501"}


id: PR:O60123
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.09 gene.","definition_xrefs":["UniProtKB:O60123","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone-processing carboxypeptidase kex1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.09","synonyms":[{"name":"Spom972h-SPBC16G5.09","type":"exact"},{"name":"carboxypeptidase D (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60123"}


id: PBO:0088053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein modifier; promotes alternative splicing of SRC1 pre-mRNA; binds non-covalently to the HIND domain of Snu66, may function in modification of Sph1p and Hbt1p, functionally complemented by the human or S. pombe ortholog; mechanism of Hub1p adduct formation not yet clear","termid":"PBO:0088053"}


id: GO:0018021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-L-histidine to form peptidyl-L-1'-methyl-L-histidine (otherwise known as tau-methylhistidine, tele-methylhistidine) or peptidyl-L-3'-methyl-L-histidine (otherwise known as pi-methylhistidine, pros-methylhistidine).","definition_xrefs":["RESID:AA0073","RESID:AA0317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine methylation","termid":"GO:0018021"}


id: PATO:0000558
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000558 size value (obsolete PATO:0000558)","termid":"PATO:0000558"}


id: GO:0030796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cycloartenol = (24R)-24-methylcycloart-25-en-3beta-ol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:13137","EC:2.1.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"cycloartenol 24-C-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05760","MetaCyc:2.1.1.142-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:cycloartenol 24-C-methyltransferase activity","type":"related"},{"name":"sterol C-methyltransferase activity","type":"broad"}],"termid":"GO:0030796"}


id: PR:Q9Y7P8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7P8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C191.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.04c","synonyms":[{"name":"Spom972h-SPCC191.04c","type":"exact"}],"termid":"PR:Q9Y7P8"}


id: PBO:0050529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocalcin like 1","termid":"PBO:0050529"}


id: PBO:0084593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein;YGR272C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YGR271C-A","termid":"PBO:0084593"}


id: PBO:0113163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of Las17p-mediated Arp2/3 complex activation; F-BAR protein that directly inhibits Las17p stimulation of Arp2/3 complex-mediated actin assembly in vitro; involved in formation of the endocytic site; intrinsically disordered domain induces bundling of Cdc11p-capped septin filaments to promote septin collar assembly, similar to mammalian ortholog FCHo2; localizes to sites of polarized growth, the septin ring, and endocytic patches; involved in actin cytoskeletal organization","termid":"PBO:0113163"}


id: FYPO:0002984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methyl methanesulfonate is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal RNA accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal RNA level during cellular response to MMS","type":"exact"},{"name":"normal RNA level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"normal mRNA level during cellular response to methyl methanesulfonate","type":"narrow"},{"name":"normal transcript level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002984"}


id: PBO:0014584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein alpha subunit EtfA (predicted)","termid":"PBO:0014584"}


id: GO:0021565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the accessory nerve over time, from its formation to the mature structure. In mice, the spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","ISBN:0838580343","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve development","synonyms":[{"name":"CN XI development","type":"related"},{"name":"cranial nerve 11 development","type":"related"},{"name":"cranial nerve XI development","type":"exact"},{"name":"spinal accessory nerve development","type":"exact"}],"termid":"GO:0021565"}


id: FYPO:0004517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable and has a diameter larger than normal only near the middle of the cell, around the nucleus.","definition_xrefs":["PMID:25552606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"viable vegetative cell enlarged around nucleus","synonyms":[{"name":"viable cell enlarged around nucleus during vegetative growth","type":"exact"},{"name":"viable vegetative cell enlarged around nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004517"}


id: MOD:00429
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms with two methyl groups.","definition_xrefs":["Unimod:36","DeltaMass:0","PubMed:14570711","PubMed:12964758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"dimethylated residue","synonyms":[{"name":"Dimethyl","type":"related"},{"name":"Me2Res","type":"exact"},{"name":"N,N dimethylation (of Arginine or Lysine)","type":"exact"},{"name":"di-Methylation","type":"related"}],"termid":"MOD:00429"}


id: MONDO:0011811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive cerebellar ataxia-saccadic intrusion syndrome is a rare hereditary ataxia characterized by a progressive cerebellar ataxia associated with disruption of visual fixation by saccadic intrusions (overshooting horizontal saccades with macrosaccadic oscillations and increased velocity of larger saccades). It presents with progressive gait, trunk and limb ataxia with pyramidal tract signs (increased tendon reflexes and Babinski sign), myoclonic jerks, fasciculations, cerebellar dysarthria, sensorimotor axonal neuropathy with impaired joint position, vibration, temperature, pain sensations, pes cavus, and saccadic intrusions with characteristic overshooting horizontal saccades, macrosaccadic oscillations, and increased velocity of larger saccades, without other eye movement disturbances.","definition_xrefs":["Orphanet:95434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive syndromic cerebellar ataxia","termid":"MONDO:0020047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive cerebellar ataxia-saccadic intrusion syndrome","secondary_identifiers":["DOID:0111611","MESH:C537310","MEDGEN:335442","UMLS:C1846492","GARD:4952","OMIM:607317"],"synonyms":[{"name":"SCAR4","type":"exact"},{"name":"SCASI","type":"exact"},{"name":"spinocerebellar ataxia 24","type":"related"},{"name":"spinocerebellar ataxia 24 (formerly)","type":"related"},{"name":"spinocerebellar ataxia 24, formerly","type":"related"},{"name":"spinocerebellar ataxia autosomal recessive 4","type":"related"},{"name":"spinocerebellar ataxia with saccadic Intrusions","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive 4","type":"related"}],"termid":"MONDO:0011811","xrefs":{"Monarch":{"xref_id":"0011811"}}}


id: MONDO:1010767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitiligo, non-human animal","termid":"MONDO:1010136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, horse","secondary_identifiers":["OMIA:001055-9796"],"termid":"MONDO:1010767","xrefs":{"Monarch":{"xref_id":"1010767"}}}


id: PBO:0047113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM161 centrosomal protein B","termid":"PBO:0047113"}


id: PBO:0017818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 Prp19","termid":"PBO:0017818"}


id: PBO:0011438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional thiamine-phosphate dipyrophosphorylase/hydroxyethylthiazole kinase","termid":"PBO:0011438"}


id: MONDO:0008084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropathy, congenital, with arthrogryposis multiplex","secondary_identifiers":["OMIM:162370","MESH:C535714","UMLS:C1834206","MEDGEN:320286"],"synonyms":[{"name":"congenital non-progressive peripheral neuropathy with arthrogryposis multiplex","type":"related"},{"name":"neuropathy, congenital, with arthrogryposis multiplex","type":"exact"}],"termid":"MONDO:0008084","xrefs":{"Monarch":{"xref_id":"0008084"}}}


id: GO:0046043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving TDP, ribosylthymine diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"TDP metabolic process","synonyms":[{"name":"TDP metabolism","type":"exact"}],"termid":"GO:0046043"}


id: PBO:0029773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_cells_with_abnormal_morphology_(obsolete_FYPO:0002466)","termid":"PBO:0029773"}


id: FYPO:0006802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which filamentous actin (F-actin) is present in a dispersed form in the cell. Normal F-actin structures (cables and cortical patches) may or may not also be present.","definition_xrefs":["PMID:9786952","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"dispersed filamentous actin","synonyms":[{"name":"delocalised F-actin","type":"exact"},{"name":"delocalised actin","type":"related"},{"name":"delocalized F-actin","type":"exact"},{"name":"dispersed F-actin","type":"exact"},{"name":"dispersed actin localization during vegetative growth","type":"exact"},{"name":"dispersed filamentous actin during mitotic cell cycle","type":"related"},{"name":"dispersed filamentous actin during vegetative growth","type":"exact"},{"name":"dispersed filamentous actin in cell","type":"exact"}],"termid":"FYPO:0006802"}


id: GO:0061416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under salt stress. The stress is usually an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:dph","PMID:18667581"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to salt stress (obsolete GO:0061416)","termid":"GO:0061416"}


id: GO:0140430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a chromosome passenger complex localization to kinetochore.","definition_xrefs":["PMID:20739936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to kinetochore","termid":"GO:1905342"},{"relation_name":"positively_regulates","term_name":"chromosome passenger complex localization to kinetochore","termid":"GO:0072356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromosome passenger complex localization to kinetochore","termid":"GO:0140430"}


id: PR:O74965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13227:SF5","PRO:DNx","OMA:SCHPO03697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.04","secondary_identifiers":["UniProtKB:O74965"],"synonyms":[{"name":"Spom972h-EIF2A","type":"exact"},{"name":"eIF-2A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74965"}


id: PBO:0056335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 15","termid":"PBO:0056335"}


id: PBO:0031862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_component_organization_phenotype","termid":"PBO:0031862"}


id: MONDO:0016279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Adenosarcoma of the cervix uteri is a rare subtype of malignant mixed epithelial and mesenchymal tumor composed of benign or mildly atypical glandular elements and a surrounding low-grade malignant stroma, often containing heterologous elements, such as areas of sex-cord-like or smooth muscle differentiation. It usually presents with vaginal bleeding or discharge, lower abdominal pain and/or a cervical mass or polyp. The tumor may arise from pre-existing endometriosis and patients may have a history of recurrent cervical polyps.","definition_xrefs":["Orphanet:213792"],"gene_count":0,"genotype_count":0,"name":"obsolete adenosarcoma of the cervix uteri (obsolete MONDO:0016279)","termid":"MONDO:0016279","xrefs":{"Monarch":{"xref_id":"0016279"}}}


id: GO:1902179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving verruculogen.","definition_xrefs":["GOC:di","PMID:23649274","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"indole alkaloid metabolic process","termid":"GO:0035834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"verruculogen metabolic process","synonyms":[{"name":"verruculogen metabolism","type":"exact"}],"termid":"GO:1902179"}


id: MONDO:0006041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine neoplasm that arises from the lung. It is characterized by the presence of uniform polygonal cells with small or moderate amount of cytoplasm and inconspicuous nucleoli. The cells are usually arranged in organoid and trabecular patterns. It is classified as typical or atypical carcinoid tumor based on the number of mitotic figures and the absence or presence of necrosis. Atypical carcinoid tumors have a worse prognosis.","definition_xrefs":["NCIT:C4038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"lung neuroendocrine neoplasm","termid":"MONDO:0005454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung carcinoid tumor","secondary_identifiers":["SCTID:254627002","MEDGEN:79070","ONCOTREE:LUCA","EFO:1000037","UMLS:C0280089"],"synonyms":[{"name":"carcinoid tumor (disease) of lung","type":"exact"},{"name":"carcinoid tumor of lung","type":"exact"},{"name":"carcinoid tumor of the lung","type":"exact"},{"name":"carcinoid tumour (disease) of lung","type":"exact"},{"name":"carcinoid tumour of lung","type":"exact"},{"name":"carcinoid tumour of the lung","type":"exact"},{"name":"lung carcinoid","type":"related"},{"name":"lung carcinoid tumor","type":"exact"},{"name":"lung carcinoid tumor (disease)","type":"exact"},{"name":"lung carcinoid tumour (disease)","type":"exact"},{"name":"pulmonary carcinoid tumor","type":"exact"},{"name":"pulmonary carcinoid tumour","type":"exact"}],"termid":"MONDO:0006041","xrefs":{"Monarch":{"xref_id":"0006041"}}}


id: PBO:0058556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6165","termid":"PBO:0058556"}


id: PBO:0000546
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Mei4","termid":"PBO:0000546"}


id: GO:0005187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein (obsolete GO:0005187)","synonyms":[{"name":"storage protein","type":"exact"}],"termid":"GO:0005187"}


id: GO:0006563
data:
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id: MONDO:0005138
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id: PBO:0079933
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA biogenesis phosphodiesterase 1","termid":"PBO:0079933"}


id: GO:1990706
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id: PBO:0057516
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 634","termid":"PBO:0057516"}


id: SO:0002027
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short open reading frame that is found in the 5' untranslated region of an mRNA and plays a role in translational regulation.","definition_xrefs":["PMID:12890013","PMID:16153175","POMBASE:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ORF","termid":"SO:0000236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uORF","secondary_identifiers":["PMID:26684391"],"synonyms":[{"name":"regulatory uORF","type":"exact"},{"name":"upstream ORF","type":"exact"}],"termid":"SO:0002027"}


id: PBO:0051891
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 2","termid":"PBO:0051891"}


id: PBO:0064698
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 34","termid":"PBO:0064698"}


id: MONDO:0014171
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  {"annotated_genes":["SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85686],"is_not":false,"summary":null,"term":"MONDO:0014171"}]},"cv_name":"mondo","definition":"Any complex cortical dysplasia with other brain malformations in which the cause of the disease is a mutation in the TUBG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01215":null},"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0090138","UMLS:C3809420","MEDGEN:815750","OMIM:615412"],"synonyms":[{"name":"CDCBM4","type":"exact"},{"name":"TUBG1 complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations caused by mutation in TUBG1","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations type 4","type":"exact"},{"name":"cortical dysplasia, Complex, with Other brain malformations type 4","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations 4","type":"related"}],"termid":"MONDO:0014171","terms_by_termid":{"MONDO:0014171":null},"xrefs":{"Monarch":{"xref_id":"0014171"}}}


id: GO:0033427
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id: GO:0048498
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id: MONDO:0850008
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment developmental abnormality with extraocular manifestations","secondary_identifiers":["MEDGEN:1842782","GARD:22084","UMLS:C5681394","Orphanet:519276"],"termid":"MONDO:0850008","xrefs":{"Monarch":{"xref_id":"0850008"}}}


id: PBO:0086019
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; associates with rDNA chromatin in vivo; TBS1 has a paralog, HAL9, that arose from the whole genome duplication","termid":"PBO:0086019"}


id: PBO:0069328
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 587, pseudogene","termid":"PBO:0069328"}


id: MONDO:0033362
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  {"annotated_genes":["SJAG_00063","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86654,86655],"is_not":false,"summary":null,"term":"MONDO:0033362"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 53","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16224","MEDGEN:1374886","UMLS:C4479313","OMIM:617389","DOID:0080464"],"synonyms":[{"name":"DEE53","type":"exact"},{"name":"EIEE53","type":"exact"},{"name":"developmental and epileptic encephalopathy 53","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 53","type":"exact"}],"termid":"MONDO:0033362","terms_by_termid":{"MONDO:0033362":null},"xrefs":{"Monarch":{"xref_id":"0033362"}}}


id: GO:0099060
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic specialization membrane (obsolete GO:0099060)","termid":"GO:0099060"}


id: MONDO:0016118
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete muscular glycogenosis (obsolete MONDO:0016118)","secondary_identifiers":["Orphanet:206959","ICD10CM:E74.0","NANDO:1200823"],"synonyms":[{"name":"glycogen storage myopathy","type":"exact"}],"termid":"MONDO:0016118","xrefs":{"Monarch":{"xref_id":"0016118"}}}


id: GO:1900148
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell migration.","definition_xrefs":["GOC:TermGenie","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell migration","termid":"GO:1900147"},{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"negatively_regulates","term_name":"Schwann cell migration","termid":"GO:0036135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell migration","synonyms":[{"name":"down regulation of Schwann cell migration","type":"exact"},{"name":"down-regulation of Schwann cell migration","type":"exact"},{"name":"downregulation of Schwann cell migration","type":"exact"},{"name":"inhibition of Schwann cell migration","type":"narrow"}],"termid":"GO:1900148"}


id: MONDO:0002118
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id: FYPO:0005173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is increased. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell surface","termid":"FYPO:0002814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to cell surface","synonyms":[{"name":"increased protein localisation to cell surface","type":"exact"},{"name":"increased protein localization to cell surface during mitotic cell cycle","type":"related"},{"name":"increased protein localization to cell surface during vegetative growth","type":"exact"}],"termid":"FYPO:0005173"}


id: PBO:0038427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-2-macroglobulin pseudogene 1","termid":"PBO:0038427"}


id: GO:0050624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydrovomilenine + NADP+ = H+ + NADPH + vomilenine.","definition_xrefs":["EC:1.5.1.32","RHEA:16409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vomilenine reductase activity","secondary_identifiers":["KEGG_REACTION:R05878","MetaCyc:1.5.1.32-RXN"],"synonyms":[{"name":"1,2-dihydrovomilenine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050624"}


id: PBO:0085159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p; required for protein translocation into the endoplasmic reticulum (ER); homolog of Yarrowia lipolytica SLS1; GrpE-like protein","termid":"PBO:0085159"}


id: GO:0007285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phase of growth and gene expression that male germ cells undergo as they enter the spermatocyte stage. The cells grow in volume and transcribe most of the gene products needed for the morphological events that follow meiosis.","definition_xrefs":["GOC:jid","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary spermatocyte growth","termid":"GO:0007285"}


id: PBO:0091814
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIR ANtagonist","termid":"PBO:0091814"}


id: GO:0018482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-formylbenzenesulfonate + H2O + NAD+ = 4-sulfobenzoate + 2 H+ + NADH.","definition_xrefs":["EC:1.2.1.62","RHEA:18833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-formylbenzenesulfonate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0292","KEGG_REACTION:R05272","MetaCyc:SYDDEHYD-RXN"],"synonyms":[{"name":"4-formylbenzenesulfonate:NAD+ oxidoreductase activity","type":"related"},{"name":"4-formylbenzenesulphonate dehydrogenase activity","type":"exact"},{"name":"toluene-sulfonate aldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0018482"}


id: GO:0047107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-guanidinobutanal + H2O + NAD+ = 4-guanidinobutanoate + 2 H+ + NADH.","definition_xrefs":["RHEA:14381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"gamma-guanidinobutyraldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R03177","EC:1.2.1.54","MetaCyc:1.2.1.54-RXN"],"synonyms":[{"name":"4-guanidinobutanal:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"4-guanidinobutyraldehyde dehydrogenase activity","type":"related"},{"name":"GBAL dehydrogenase activity","type":"related"},{"name":"alpha-guanidinobutyraldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047107"}


id: PBO:0084114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase encoded by the Y' element of subtelomeric regions; highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0084114"}


id: FYPO:0002327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a sterol measured in a cell is higher than normal. A sterol is any natural product derived from the steroid skeleton and containing a hydroxy group in the 3 position, closely related to cholestan-3-ol.","definition_xrefs":["PomBase:mah","CHEBI:15889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular sterol level","termid":"FYPO:0002325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular sterol level","synonyms":[{"name":"increased cellular sterol level during mitotic cell cycle","type":"related"},{"name":"increased cellular sterol level during vegetative growth","type":"exact"},{"name":"increased sterol level","type":"exact"}],"termid":"FYPO:0002327"}


id: GO:0062033
data:
  {"annotated_genes":["SJAG_02169","SJAG_03126","SJAG_02451","SJAG_01679","SJAG_00082","SJAG_01297","SJAG_00883","SJAG_04597","SJAG_03353","SJAG_03681","SJAG_02336","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90486,108006,113524,115643,111706,103647,114011,99350,106987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[93960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[89762,94173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"}]},"cv_name":"biological_process","definition":"Any process that starts or increases the frequency, rate or extent of sister chromatid segregation during mitosis.","definition_xrefs":["PMID:12773390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid segregation","termid":"GO:0033047"},{"relation_name":"is_a","term_name":"positive regulation of chromosome segregation","termid":"GO:0051984"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic sister chromatid segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062033","terms_by_termid":{"GO:0140499":null,"GO:1902426":null,"GO:1902846":null}}


id: PBO:0056411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 8","termid":"PBO:0056411"}


id: PBO:0070047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 4, pseudogene","termid":"PBO:0070047"}


id: FYPO:0000599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of vacuolar transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased rate of vacuolar transport","synonyms":[{"name":"decreased rate of vacuolar protein transport","type":"narrow"},{"name":"decreased rate of vacuolar transport during mitotic cell cycle","type":"related"},{"name":"decreased rate of vacuolar transport during vegetative growth","type":"exact"},{"name":"reduced rate of vacuolar transport","type":"exact"},{"name":"vacuolar transport: decreased rate","type":"related"}],"termid":"FYPO:0000599"}


id: MONDO:0014576
data:
  {"annotated_genes":["SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85216],"is_not":false,"summary":null,"term":"MONDO:0014576"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipoic acid biosynthesis defect","termid":"MONDO:0018424"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"lipoyl transferase 1 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:904073","Orphanet:401862","UMLS:C4225379","GARD:12680","OMIM:616299"],"synonyms":[{"name":"LIPT1D","type":"related"},{"name":"lipoyltransferase 1 deficiency","type":"related"}],"termid":"MONDO:0014576","terms_by_termid":{"MONDO:0014576":null},"xrefs":{"Monarch":{"xref_id":"0014576"}}}


id: PBO:0049366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 1 pseudogene 1","termid":"PBO:0049366"}


id: PBO:0113037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein with similarity to glucanases; targeted to vacuole via AP-3 pathway; scw4 scw10 double mutants exhibit defects in mating; SCW4 has a paralog, SCW10, that arose from the whole genome duplication","termid":"PBO:0113037"}


id: PBO:0029696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_polymerase_II_core_promoter_proximal_region_sequence-specific_DNA_binding","termid":"PBO:0029696"}


id: GO:0016162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose and cellotetraose, releasing cellobiose from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"cellulose 1,4-beta-cellobiosidase activity","secondary_identifiers":["MetaCyc:3.2.1.91-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan cellobiohydrolase activity","type":"related"},{"name":"1,4-beta-cellobiohydrolase activity","type":"related"},{"name":"1,4-beta-glucan cellobiosidase activity","type":"related"},{"name":"C1 cellulase activity","type":"related"},{"name":"CBH 1","type":"related"},{"name":"avicelase activity","type":"broad"},{"name":"beta-1,4-glucan cellobiohydrolase activity","type":"related"},{"name":"beta-1,4-glucan cellobiosylhydrolase activity","type":"related"},{"name":"cellobiohydrolase I","type":"related"},{"name":"cellobiohydrolase activity","type":"related"},{"name":"cellobiosidase activity","type":"related"},{"name":"exo-1,4-beta-D-glucanase activity","type":"related"},{"name":"exo-beta-1,4-glucan cellobiohydrolase activity","type":"related"},{"name":"exo-cellobiohydrolase activity","type":"related"},{"name":"exocellobiohydrolase activity","type":"related"},{"name":"exoglucanase activity","type":"related"}],"termid":"GO:0016162"}


id: PBO:0052556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor G1","termid":"PBO:0052556"}


id: PR:P41887
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock protein HSP 90-alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.04c","secondary_identifiers":["UniProtKB:P41887"],"synonyms":[{"name":"Spom972h-HSP90AA1","type":"exact"}],"termid":"PR:P41887"}


id: GO:0035891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism out of a cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19325115","GOC:bf","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from host cell","secondary_identifiers":["GO:0035890"],"synonyms":[{"name":"ejection from host","type":"related"},{"name":"ejection from host cell","type":"related"},{"name":"exit from host","type":"related"},{"name":"host cell exit","type":"exact"}],"termid":"GO:0035891"}


id: PBO:0064818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3A","termid":"PBO:0064818"}


id: MONDO:0017145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"beta-thalassemia and related diseases","secondary_identifiers":["GARD:21023","UMLS:C5680748","MEDGEN:1826095","Orphanet:275749"],"termid":"MONDO:0017145","xrefs":{"Monarch":{"xref_id":"0017145"}}}


id: MONDO:0859281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with autism and dysmorphic facies","secondary_identifiers":["UMLS:C5774206","OMIM:620021","MEDGEN:1823979"],"termid":"MONDO:0859281","xrefs":{"Monarch":{"xref_id":"0859281"}}}


id: PBO:0027143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_resistant_to_ionizing_radiation","termid":"PBO:0027143"}


id: MONDO:0006894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by retropatellar or peripatellar pain resulting from physical and biochemical changes in the patellofemoral joint. The pain is most prominent when ascending or descending stairs, squatting, or sitting with flexed knees. There is a lack of consensus on the etiology and treatment. The syndrome is often confused with (or accompanied by) chondromalacia patellae, the latter describing a pathological condition of the cartilage and not a syndrome.","definition_xrefs":["MESH:D046788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patellofemoral pain syndrome","secondary_identifiers":["MedDRA:10049143","EFO:1001092","UMLS:C0877149","DOID:14284","MEDGEN:164080","SCTID:430725003"],"termid":"MONDO:0006894","xrefs":{"Monarch":{"xref_id":"0006894"}}}


id: PBO:0064217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCB2 antisense RNA 1","termid":"PBO:0064217"}


id: MONDO:0008612
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86901],"is_not":false,"summary":null,"term":"MONDO:0008612"}]},"cv_name":"mondo","definition":"Tuberous sclerosis mapped to chromosome 9q34 (TSC1 gene).","definition_xrefs":["NCIT:C75122"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete tuberous sclerosis complex (obsolete MONDO:0019341)","termid":"MONDO:0019341"},{"relation_name":"is_a","term_name":"tuberous sclerosis","termid":"MONDO:0001734"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"tuberous sclerosis 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:191100","UMLS:C1854465","DOID:0080324","GARD:15121","MESH:C565346","MEDGEN:344288"],"synonyms":[{"name":"TSC1","type":"related"},{"name":"TSC1 tuberous sclerosis","type":"exact"},{"name":"tuberose sclerosis","type":"related"},{"name":"tuberous sclerosis 1","type":"exact"},{"name":"tuberous sclerosis Complex","type":"related"},{"name":"tuberous sclerosis caused by mutation in TSC1","type":"exact"},{"name":"tuberous sclerosis type 1","type":"exact"},{"name":"tuberous sclerosis, type 1","type":"related"},{"name":"tuberous sclerosis-1","type":"exact"}],"termid":"MONDO:0008612","terms_by_termid":{"MONDO:0008612":null},"xrefs":{"Monarch":{"xref_id":"0008612"}}}


id: PBO:0054664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2070","termid":"PBO:0054664"}


id: PR:Q09849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arp42 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit arp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.09","synonyms":[{"name":"Spom972h-arp42","type":"exact"},{"name":"actin-related protein 42 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"chromatin structure-remodeling complex subunit arp42 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09849"}


id: PBO:0074972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-14","termid":"PBO:0074972"}


id: PBO:0027065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_transport_phenotype","termid":"PBO:0027065"}


id: PR:Q9UUJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec24 gene.","definition_xrefs":["UniProtKB:Q9UUJ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.15c","synonyms":[{"name":"Spom972h-rec24","type":"exact"},{"name":"meiotically up-regulated gene 6 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ4"}


id: GO:0050696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of trichloroethylene, a toxic, colorless, photoreactive, chlorinated hydrocarbon liquid, commonly used as a metal degreaser and solvent.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichloroethylene metabolic process","termid":"GO:0018979"},{"relation_name":"is_a","term_name":"chlorinated hydrocarbon catabolic process","termid":"GO:0042205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichloroethylene catabolic process","synonyms":[{"name":"trichloroethene catabolic process","type":"exact"},{"name":"trichloroethene catabolism","type":"exact"},{"name":"trichloroethylene breakdown","type":"exact"},{"name":"trichloroethylene catabolism","type":"exact"},{"name":"trichloroethylene degradation","type":"exact"}],"termid":"GO:0050696"}


id: GO:0000171
data:
  {"annotated_genes":["SJAG_02553","SJAG_03425","SJAG_03234","SJAG_03952","SJAG_00955","SJAG_01551","SJAG_06613","SJAG_02547","SJAG_01623","SJAG_03796","SJAG_04916","SJAG_04582"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70981,94471,96257,96548,104317,104535,105425,105426,113236,115052,115139,118335],"is_not":false,"summary":null,"term":"GO:0000171"}]},"cv_name":"molecular_function","definition":"Catalysis of the site-specific cleavage of RNA by a catalytic RNA-mediated mechanism; substrates include the A3 site in the ITS1 of pre-rRNA.","definition_xrefs":["PMID:17881380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00955":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"ribonuclease MRP activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:RNase_MRP"],"synonyms":[{"name":"RNase MRP","type":"exact"}],"termid":"GO:0000171","terms_by_termid":{"GO:0000171":null}}


id: PBO:0091501
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript, alternative initiation site","termid":"PBO:0091501"}


id: PBO:0051286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-33","termid":"PBO:0051286"}


id: PBO:0049303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 4","termid":"PBO:0049303"}


id: PBO:0040513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 2","termid":"PBO:0040513"}


id: PBO:0111756
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRRAP family protein","termid":"PBO:0111756"}


id: GO:0015101
data:
  {"annotated_genes":["SJAG_02059","SJAG_04295","SJAG_00763","SJAG_03652","SJAG_00626","SJAG_04637","SJAG_04984","SJAG_01890","SJAG_00835","SJAG_00543","SJAG_04718","SJAG_04673","SJAG_04725","SJAG_04731","SJAG_02029","SJAG_02125","SJAG_02962","SJAG_03808","SJAG_02060","SJAG_02152","SJAG_01589","SJAG_03256","SJAG_04588","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015220"},{"annotations":[75103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[77531,69719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[100436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[100119,78890,97115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[109779,102554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[97116,78883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[102555,109780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[109781,78887,100120,102556,97117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[107660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[100972,100112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[78888,90382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[78884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"},{"annotations":[99016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015200"},{"annotations":[70391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015489"},{"annotations":[89909,89910,118494,117216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031925"},{"annotations":[89911,117217,89912,118495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031927"},{"annotations":[75823,79860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000095"},{"annotations":[70392,110685,117093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015606"},{"annotations":[103391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[89916,89915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"}]},"cv_name":"molecular_function","definition":"Enables the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_00626":null,"SJAG_00763":null,"SJAG_00835":null,"SJAG_01589":null,"SJAG_01890":null,"SJAG_02029":null,"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02152":null,"SJAG_02962":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03652":null,"SJAG_03808":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04673":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04731":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"organic cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-549279","Reactome:R-HSA-9794523","Reactome:R-HSA-561072","Reactome:R-HSA-9795207","Reactome:R-HSA-549304","Reactome:R-HSA-549129","Reactome:R-HSA-561054","Reactome:R-HSA-9794270","Reactome:R-HSA-2161500","Reactome:R-HSA-549322"],"termid":"GO:0015101","terms_by_termid":{"GO:0000064":null,"GO:0000095":null,"GO:0005290":null,"GO:0005302":null,"GO:0015182":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0015200":null,"GO:0015220":null,"GO:0015234":null,"GO:0015489":null,"GO:0015606":null,"GO:0031925":null,"GO:0031927":null,"GO:0033229":null,"GO:0034216":null,"GO:0061459":null,"GO:0090422":null}}


id: FYPO:0004329
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type) in regions containing ribosomal DNA (rDNA). Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GO:0051306","PMID:17032733","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic sister chromatid separation","termid":"FYPO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic rDNA separation","synonyms":[{"name":"normal mitotic chromosome separation at rDNA","type":"exact"},{"name":"normal mitotic rDNA separation during vegetative growth","type":"exact"},{"name":"normal mitotic ribosomal DNA separation","type":"exact"},{"name":"normal mitotic sister chromatid separation at rDNA","type":"exact"},{"name":"normal rDNA separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004329"}


id: PBO:0090445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps54","termid":"PBO:0090445"}


id: MONDO:0013815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial bent bone dysplasia syndrome","termid":"MONDO:0031615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bent bone dysplasia syndrome 1","secondary_identifiers":["MEDGEN:482877","OMIM:614592","Orphanet:313855","UMLS:C3281247","GARD:10965"],"synonyms":[{"name":"BBDS","type":"related"},{"name":"FGFR2-related bent bone dysplasia","type":"exact"},{"name":"bent bone dysplasia (BBD)-FGFR2 type","type":"related"},{"name":"bent bone dysplasia syndrome","type":"related"},{"name":"perinatal lethal bent bone dysplasia","type":"exact"}],"termid":"MONDO:0013815","xrefs":{"Monarch":{"xref_id":"0013815"}}}


id: PBO:0091998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing, quiescence specific","termid":"PBO:0091998"}


id: PBO:0052940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 24-1","termid":"PBO:0052940"}


id: GO:0140275
data:
  {"annotated_genes":["SJAG_04237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[117528],"is_not":false,"summary":null,"term":"GO:0140275"}]},"cv_name":"cellular_component","definition":"A mitochondrial intermembrane space bridging complex consisting of components of the MICOS complex in the inner mitochondrial membrane, the SAM complex in the outer membrane, a conserved DNAJ protein (human DNAJC11) and Metaxin 1.","definition_xrefs":["PMID:26477565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"MIB complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial intermembrane space bridging complex","type":"exact"},{"name":"mitofilin complex","type":"exact"}],"termid":"GO:0140275","terms_by_termid":{"GO:0140275":null}}


id: FYPO:0000032
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119034],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[119331],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[119323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119086,119178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119356],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119324,119198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119035],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[119320,119321],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytokinesis is abnormal. 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id: GO:0018366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a mixture of the two possible enantiomers from the D- or L-enantiomer of a chiral amino acid.","definition_xrefs":["ISBN:0198506732","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"chiral amino acid racemization","termid":"GO:0018366"}


id: GO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction","synonyms":[{"name":"down regulation of tolerance induction","type":"exact"},{"name":"down-regulation of tolerance induction","type":"exact"},{"name":"downregulation of tolerance induction","type":"exact"},{"name":"inhibition of tolerance induction","type":"narrow"}],"termid":"GO:0002644"}


id: MONDO:0017120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other syndrome with a central nervous system malformation as major feature (obsolete MONDO:0017120)","secondary_identifiers":["Orphanet:269531"],"termid":"MONDO:0017120","xrefs":{"Monarch":{"xref_id":"0017120"}}}


id: GO:0098976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synaptic transmission that results in an excitatory postsynaptic potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"excitatory chemical synaptic transmission","termid":"GO:0098976"}


id: PBO:0036294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex polyribonucleotide 5'-hydroxyl-kinase subunit (predicted)","termid":"PBO:0036294"}


id: PBO:0084039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored protein involved in cell wall remodeling; involved in the assembly of the cell wall chitin-glucan structure and repair of damage caused by the antifungal agent polyhexamethylene biguanide; role in the cell wall integrity pathway; expression is upregulated in response to cell wall stress; transported to the cell surface after Pmt1p-Pmt2p-mediated O-mannosylation, colocalizing with bud scars","termid":"PBO:0084039"}


id: MONDO:0019078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cranio-cerebello-cardiac (3C) syndrome is a rare multiple congenital anomalies syndrome characterized by craniofacial (prominent occiput and forehead, hypertelorism, ocular coloboma, cleft palate), cerebellar (Dandy-Walker malformation, cerebellar vermis hypoplasia) and cardiac (tetralogy of Fallot, atrial and ventricular septal defects) anomalies.","definition_xrefs":["Orphanet:7"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"Ritscher-Schinzel syndrome","secondary_identifiers":["DOID:0060565","GARD:5666","MEDGEN:163220","MESH:C535313","OMIMPS:220210","SCTID:718556007","UMLS:C0796137"],"synonyms":[{"name":"3C syndrome","type":"exact"},{"name":"CCC dysplasia","type":"exact"},{"name":"Craniocerebellocardiac dysplasia","type":"exact"},{"name":"Dandy-Walker like malformation with atrioventricular septal defect","type":"related"},{"name":"Dandy-Walker-like malformation with ASD","type":"related"},{"name":"Dandy-Walker-like malformation with atrioventricular septal defect","type":"related"},{"name":"Ritscher Schinzel syndrome","type":"related"},{"name":"Ritscher-Schinzel cranio-cerebello-cardiac syndrome","type":"related"},{"name":"Ritscher-Schinzel syndrome","type":"exact"},{"name":"cranio-cerebello-cardiac dysplasia","type":"related"},{"name":"craniocerebellocardiac dysplasia","type":"exact"}],"termid":"MONDO:0019078","xrefs":{"Monarch":{"xref_id":"0019078"}}}


id: PBO:0041111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 4","termid":"PBO:0041111"}


id: GO:0005568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial rRNA (obsolete GO:0005568)","synonyms":[{"name":"mitochondrial rRNA","type":"exact"}],"termid":"GO:0005568"}


id: PBO:0076592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 13","termid":"PBO:0076592"}


id: PBO:0090872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Gos1","termid":"PBO:0090872"}


id: PR:Q92357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fusion protein cfr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.12","synonyms":[{"name":"CHS5-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfr1","type":"exact"}],"termid":"PR:Q92357"}


id: RO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"RO:0002564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","termid":"RO:0002481"}


id: PBO:0047678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin B","termid":"PBO:0047678"}


id: PBO:0070704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 8","termid":"PBO:0070704"}


id: FYPO:0004102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of polyubiquitination of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination during vegetative growth","termid":"FYPO:0002768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein polyubiquitination during vegetative growth","synonyms":[{"name":"decreased protein multiubiquitination during vegetative growth","type":"exact"},{"name":"decreased protein polyubiquitination during mitotic cell cycle","type":"related"},{"name":"decreased protein polyubiquitinylation during vegetative growth","type":"exact"},{"name":"decreased protein polyubiquitylation during vegetative growth","type":"exact"},{"name":"reduced protein polyubiquitination during vegetative growth","type":"exact"}],"termid":"FYPO:0004102"}


id: PBO:0083469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PET130","termid":"PBO:0083469"}


id: MOD:01190
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from Unimod Chemical derivative. OBSOLETE because duplicate and redundant with MOD:01006. Remap to MOD:01006.","definition_xrefs":["Unimod:534"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01190 dibromo (obsolete MOD:01190)","synonyms":[{"name":"Dibromo","type":"related"}],"termid":"MOD:01190"}


id: PBO:0079005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 5-1","termid":"PBO:0079005"}


id: MONDO:0007498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear exostoses","secondary_identifiers":["OMIM:128300","MEDGEN:56363","UMLS:C0155411"],"synonyms":[{"name":"ear exostoses","type":"exact"},{"name":"exostoses of external auditory canal","type":"related"}],"termid":"MONDO:0007498","xrefs":{"Monarch":{"xref_id":"0007498"}}}


id: PBO:0050788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3B","termid":"PBO:0050788"}


id: MONDO:0012813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that has material basis in variation in the chromosome region 4q32-q34.","definition_xrefs":["DOID:0110378","PMID:11381043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 29","secondary_identifiers":["MEDGEN:393710","UMLS:C2677325","GARD:10378","ICD10CM:H35.5","MESH:C567403","OMIM:612165"],"synonyms":[{"name":"RP 29","type":"related"},{"name":"RP29","type":"exact"},{"name":"retinitis pigmentosa 29","type":"exact"},{"name":"retinitis pigmentosa type 29","type":"exact"}],"termid":"MONDO:0012813","xrefs":{"Monarch":{"xref_id":"0012813"}}}


id: MOD:01591
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 304.205359 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.000001 Da","termid":"MOD:01515"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199-304.206 Da","termid":"MOD:01592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}


id: GO:1904299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcytosis.","definition_xrefs":["GO_REF:0000058","PMID:9664076","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of transcytosis","termid":"GO:1904298"},{"relation_name":"negatively_regulates","term_name":"transcytosis","termid":"GO:0045056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of transcytosis","synonyms":[{"name":"down regulation of transcytosis","type":"exact"},{"name":"down-regulation of transcytosis","type":"exact"},{"name":"downregulation of transcytosis","type":"exact"},{"name":"inhibition of transcytosis","type":"narrow"}],"termid":"GO:1904299"}


id: GO:1901946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of miltiradiene.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"miltiradiene metabolic process","termid":"GO:1901944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"miltiradiene biosynthetic process","synonyms":[{"name":"miltiradiene anabolism","type":"exact"},{"name":"miltiradiene biosynthesis","type":"exact"},{"name":"miltiradiene formation","type":"exact"},{"name":"miltiradiene synthesis","type":"exact"}],"termid":"GO:1901946"}


id: MONDO:0004048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant teratoma that arises from the stomach.","definition_xrefs":["NCIT:C5256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant gastric germ cell tumor","termid":"MONDO:0003112"},{"relation_name":"is_a","term_name":"gastric teratoma","termid":"MONDO:0003513"},{"relation_name":"is_a","term_name":"malignant teratoma","termid":"MONDO:0003514"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"immature gastric teratoma","secondary_identifiers":["DOID:6948","UMLS:C1334151","MEDGEN:272752"],"synonyms":[{"name":"immature gastric teratoma","type":"exact"},{"name":"malignant gastric teratoma","type":"exact"},{"name":"malignant teratoma of stomach","type":"exact"},{"name":"malignant teratoma of the stomach","type":"exact"},{"name":"stomach malignant teratoma","type":"exact"}],"termid":"MONDO:0004048","xrefs":{"Monarch":{"xref_id":"0004048"}}}


id: GO:0010059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces or promotes atrichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of atrichoblast fate specification","termid":"GO:0010058"},{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"positive regulation of plant epidermal cell differentiation","termid":"GO:1903890"},{"relation_name":"positively_regulates","term_name":"atrichoblast fate specification","termid":"GO:0010056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of atrichoblast fate specification","synonyms":[{"name":"activation of atrichoblast fate","type":"narrow"},{"name":"stimulation of atrichoblast fate","type":"narrow"},{"name":"up regulation of atrichoblast fate","type":"exact"},{"name":"up-regulation of atrichoblast fate","type":"exact"},{"name":"upregulation of atrichoblast fate","type":"exact"}],"termid":"GO:0010059"}


id: GO:0017176
data:
  {"annotated_genes":["SJAG_04881","SJAG_06383","SJAG_02804","SJAG_02913","SJAG_04119","SJAG_03066"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77290,92762,92853,108340,111347,116980],"is_not":false,"summary":null,"term":"GO:0017176"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol.","definition_xrefs":["EC:2.4.1.198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_04119":null,"SJAG_04881":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14789","MetaCyc:2.4.1.198-RXN"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:1-phosphatidyl-1D-myo-inositol 6-(N-acetyl-alpha-D-glucosaminyl)transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:phosphatidylinositol N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine alpha-1,6-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine alpha1,6-acetyl-D-glucosaminyltransferase activity","type":"related"}],"termid":"GO:0017176","terms_by_termid":{"GO:0017176":null}}


id: GO:0061384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of shaping a trabecula in the heart. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula morphogenesis","termid":"GO:0061383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart trabecula morphogenesis","termid":"GO:0061384"}


id: PBO:0041484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 97","termid":"PBO:0041484"}


id: PATO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence quality inhering in a bearer by virtue of emitting light during exposure to radiation from an external source.","definition_xrefs":["web:www.thefreedictionary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescence","termid":"PATO:0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescent","termid":"PATO:0001290"}


id: PR:O42666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- but1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uba3-binding protein but1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.12c","synonyms":[{"name":"Spom972h-but1","type":"exact"},{"name":"meiotically up-regulated gene 107 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42666"}


id: PBO:0065017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 2 pseudogene 1","termid":"PBO:0065017"}


id: PBO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.67","termid":"PBO:0001120"}


id: MONDO:0021084
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014872"}]},"cv_name":"mondo","definition":"Any impairment to the vision.","definition_xrefs":["NCIT:C35126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"is_obsolete":false,"name":"vision disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:95677002","MEDGEN:12103","MESH:D014786","UMLS:C0042790","MedDRA:10047518"],"synonyms":[{"name":"disorder of vision","type":"exact"},{"name":"disorder of visual system","type":"broad"},{"name":"vision disorder","type":"exact"},{"name":"visual Field disorder","type":"related"},{"name":"visual disorder","type":"exact"},{"name":"visual system disorder","type":"broad"}],"termid":"MONDO:0021084","terms_by_termid":{"MONDO:0014872":null},"xrefs":{"Monarch":{"xref_id":"0021084"}}}


id: MONDO:0011795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anonychia-microcephaly syndrome is a multiple congenital anomaly disorder characterized by anonychia congenita totalis and microcephaly, and normal intelligence along with some minor anomalies including single transverse palmar creases, fifth-finger clinodactyly and widely-spaced teeth.","definition_xrefs":["Orphanet:1094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anonychia-microcephaly syndrome","secondary_identifiers":["MEDGEN:339565","UMLS:C1846617","GARD:5123","SCTID:720494009","OMIM:607214"],"synonyms":[{"name":"Teebi-Kaurah syndrome","type":"exact"},{"name":"anonychia total with microcephaly","type":"related"},{"name":"anonychia, total, with microcephaly","type":"related"},{"name":"total anonychia congenita and microcephaly","type":"related"},{"name":"total anonychia with microcephaly","type":"related"}],"termid":"MONDO:0011795","xrefs":{"Monarch":{"xref_id":"0011795"}}}


id: MONDO:0012915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 1q21.1 duplication syndrome is a rare condition caused by the presence of an extra copy of a small piece of chromosome 1 in the cells of the body. Signs and symptoms can vary widely among affected individuals. Some individuals have no symptoms, while others may have features such as a large head size (macrocephaly); mild to moderate developmental delay and learning difficulties; autism or autistic-like behavior; heart problems; seizures; and/or and distinctive facial features. This condition can occur sporadically as a de novo mutation (by chance) or can be inherited in an autosomal dominant manner from a parent. Treatment depends on the signs and symptoms present in each individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 1","termid":"MONDO:0016952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1q21.1 duplication syndrome","secondary_identifiers":["DOID:0060435","Orphanet:250994","UMLS:C2675891","MEDGEN:382715","GARD:10591","MESH:C567290","DECIPHER:67","OMIM:612475"],"synonyms":[{"name":"1q21.1 microduplication syndrome","type":"exact"},{"name":"1q21.1 recurrent microduplication (possible susceptibility locus for neurodevelopmental disorders)","type":"exact"},{"name":"chromosome 1q21.1 duplication syndrome","type":"exact"},{"name":"chromosome 1q21.1 duplication syndrome, isolated cases","type":"exact"},{"name":"dup(1)(q21.1)","type":"exact"},{"name":"trisomy 1q21.1","type":"exact"}],"termid":"MONDO:0012915","xrefs":{"Monarch":{"xref_id":"0012915"}}}


id: PBO:0050105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 15","termid":"PBO:0050105"}


id: GO:0097316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an N-acetyl-D-glucosamine stimulus.","definition_xrefs":["PMID:21700702","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to N-acetyl-D-glucosamine","termid":"GO:0097315"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to N-acetyl-D-glucosamine","termid":"GO:0097316"}


id: GO:0006893
data:
  {"annotated_genes":["SJAG_01516","SJAG_02320","SJAG_04358","SJAG_04044","SJAG_01114","SJAG_00330","SJAG_00144","SJAG_02753","SJAG_03938","SJAG_00430","SJAG_03864","SJAG_03838","SJAG_03970","SJAG_00916","SJAG_00858","SJAG_01335","SJAG_03754","SJAG_02240","SJAG_04609","SJAG_00826"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57473,70550,71731,72409,75718,77169,92036,99521,100608,106053,107139],"is_not":false,"summary":null,"term":"GO:0006893"},{"annotations":[106802,109331,112751,69854,106171,94906,77231,108551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[87850],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-Golgi vesicle-mediated transport","termid":"GO:0006892"},{"relation_name":"is_a","term_name":"vesicle-mediated transport to the plasma membrane","termid":"GO:0098876"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00430":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01335":null,"SJAG_01516":null,"SJAG_02240":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_03754":null,"SJAG_03838":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03970":null,"SJAG_04044":null,"SJAG_04358":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"Golgi to plasma membrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi to plasma membrane vesicle-mediated transport","type":"exact"}],"termid":"GO:0006893","terms_by_termid":{"GO:0006893":null,"GO:0042997":null,"GO:0043001":null}}


id: GO:0042637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regression phase of the hair cycle during which cell proliferation ceases, the hair follicle shortens, and an anchored club hair is produced.","definition_xrefs":["PMID:12535193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle phase","termid":"GO:0044851"},{"relation_name":"part_of","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catagen","synonyms":[{"name":"hair regression","type":"narrow"}],"termid":"GO:0042637"}


id: PBO:0073026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stimulator of chondrogenesis 1","termid":"PBO:0073026"}


id: PBO:0028051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_morphology_during_meiosis_II","termid":"PBO:0028051"}


id: FYPO:0002712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of DNA recombination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased DNA recombination","synonyms":[{"name":"decreased DNA recombination frequency","type":"exact"},{"name":"decreased DNA recombination rate","type":"related"},{"name":"decreased recombination","type":"exact"},{"name":"reduced DNA recombination","type":"exact"}],"termid":"FYPO:0002712"}


id: PBO:0075471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 21","termid":"PBO:0075471"}


id: GO:0018330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient guanylylation of lysine to form N6-(phospho-5'-guanosine)-L-lysine, found in the guanylyltransferase active site of mRNA capping enzyme.","definition_xrefs":["RESID:AA0228"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via N6-(phospho-5'-guanosine)-L-lysine (obsolete GO:0018330)","termid":"GO:0018330"}


id: MONDO:0008296
data:
  {"annotated_genes":["SJAG_04109"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85489],"is_not":false,"summary":null,"term":"MONDO:0008296"}]},"cv_name":"mondo","definition":"An instance of porphyria cutanea tarda that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyria cutanea tarda","termid":"MONDO:0015104"},{"relation_name":"is_a","term_name":"UROD-related inherited porphyria","termid":"MONDO:0100498"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04109":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005093","MONDO:0019142","MONDO:0002515","MONDO:0005066"],"is_obsolete":false,"name":"familial porphyria cutanea tarda","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:59229005","Orphanet:443062","icd11.foundation:1318287619","EFO:0009043","UMLS:C0268323","MEDGEN:75669","OMIM:176100","GARD:17750"],"synonyms":[{"name":"PCT","type":"related"},{"name":"PCT, 'familial' type","type":"related"},{"name":"PCT, type 2","type":"related"},{"name":"Urod deficiency","type":"related"},{"name":"hereditary porphyria cutanea tarda","type":"exact"},{"name":"porphyria cutanea tarda","type":"related"},{"name":"porphyria cutanea tarda type II","type":"exact"},{"name":"porphyria cutanea tarda, susceptibility to","type":"exact"},{"name":"porphyria cutanea tarda, type 2","type":"related"},{"name":"porphyria, Hepatocutaneous type","type":"related"},{"name":"porphyria, hepatoerythropoietic","type":"related"},{"name":"uroporphyrinogen decarboxylase deficiency","type":"related"}],"termid":"MONDO:0008296","terms_by_termid":{"MONDO:0008296":null},"xrefs":{"Monarch":{"xref_id":"0008296"}}}


id: PBO:0059180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRE11 homolog, double strand break repair nuclease","termid":"PBO:0059180"}


id: PR:Q9Y7P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ERO1-like protein alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04810","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERO1-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.14c","secondary_identifiers":["UniProtKB:Q9Y7P1"],"synonyms":[{"name":"Spom972h-ERO1L","type":"exact"},{"name":"endoplasmic reticulum oxidoreductin-1-like protein B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7P1"}


id: GO:0046414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organomercury compounds, any organic compound containing a mercury atom.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercury biosynthetic process (obsolete GO:0046414)","synonyms":[{"name":"organomercury anabolism","type":"exact"},{"name":"organomercury biosynthesis","type":"exact"},{"name":"organomercury formation","type":"exact"},{"name":"organomercury synthesis","type":"exact"}],"termid":"GO:0046414"}


id: MONDO:0019442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital toxoplasmosis (obsolete MONDO:0019442)","termid":"MONDO:0019442","xrefs":{"Monarch":{"xref_id":"0019442"}}}


id: PBO:0070495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 30","termid":"PBO:0070495"}


id: PBO:0004705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-5' exoribonuclease, PH-like (predicted)","termid":"PBO:0004705"}


id: PBO:0060302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL12A and MYL12B antisense RNA 1","termid":"PBO:0060302"}


id: GO:0018344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a geranylgeranyl group to a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenylation","termid":"GO:0018342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein geranylgeranylation","secondary_identifiers":["GO:0018348"],"synonyms":[{"name":"C-terminal protein geranylgeranylation","type":"narrow"},{"name":"protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:0018344"}


id: PATO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is low relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased age","synonyms":[{"name":"low age","type":"exact"}],"termid":"PATO:0001765"}


id: MONDO:0011561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with variation in the region 10q24.","definition_xrefs":["DOID:0110038","PMID:16385451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease 6","secondary_identifiers":["MEDGEN:381362","MESH:C565325","OMIM:605526","GARD:16509","UMLS:C1854187"],"synonyms":[{"name":"AD6","type":"exact"},{"name":"Alzheimer disease 6","type":"exact"},{"name":"Alzheimer disease 6, late onset","type":"exact"},{"name":"Alzheimer disease 6, late-onset","type":"related"},{"name":"Alzheimer disease type 6","type":"exact"},{"name":"Alzheimer's disease 6","type":"exact"},{"name":"Alzheimer's disease type 6","type":"exact"},{"name":"plasma Beta-amyloid-42 level quantitative trait locus","type":"related"}],"termid":"MONDO:0011561","xrefs":{"Monarch":{"xref_id":"0011561"}}}


id: PBO:0017839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 1 (predicted)","termid":"PBO:0017839"}


id: GO:1901733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quercetin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid catabolic process","termid":"GO:0046275"},{"relation_name":"is_a","term_name":"quercetin metabolic process","termid":"GO:1901732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin catabolic process","synonyms":[{"name":"quercetin breakdown","type":"exact"},{"name":"quercetin catabolism","type":"exact"},{"name":"quercetin degradation","type":"exact"}],"termid":"GO:1901733"}


id: PBO:0027388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_salt_stress","termid":"PBO:0027388"}


id: FYPO:0003614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable meiotic spindle during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle absent from cell during meiosis","termid":"FYPO:0006391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0000120","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"meiotic spindle absent from cell during meiosis II","synonyms":[{"name":"absent meiotic spindle during meiosis II","type":"exact"},{"name":"meiosis II spindle absent","type":"exact"},{"name":"meiotic spindle absent from cell during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003614"}


id: MONDO:0006447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A testicular germ cell tumor characterized by the absence of a seminomatous component. It includes embryonal carcinoma, yolk sac tumor, choriocarcinoma, teratoma, and mixed forms.","definition_xrefs":["NCIT:C9313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular non-seminomatous germ cell tumor","secondary_identifiers":["Orphanet:363494","UMLS:C2057625","EFO:1000570","DOID:4086","GARD:17561","ICDO:9065/3","MEDGEN:890627"],"synonyms":[{"name":"non-dysgerminomatous germ cell tumor of testis","type":"exact"},{"name":"non-dysgerminomatous germ cell tumour of testis","type":"exact"},{"name":"non-seminomatous germ cell tumor of testis","type":"exact"},{"name":"non-seminomatous germ cell tumour of testis","type":"exact"},{"name":"testicular germ cell tumor non-seminomatous","type":"exact"},{"name":"testicular germ cell tumour non-seminomatous","type":"exact"},{"name":"testicular non seminomatous germ cell tumor","type":"exact"},{"name":"testicular non seminomatous germ cell tumour","type":"exact"},{"name":"testicular non-dysgerminomatous germ cell tumor","type":"exact"},{"name":"testicular non-dysgerminomatous germ cell tumour","type":"exact"},{"name":"testicular non-seminomatous germ cell tumor","type":"exact"}],"termid":"MONDO:0006447","xrefs":{"Monarch":{"xref_id":"0006447"}}}


id: GO:0006484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Oxidation of two cysteine sulfhydryl groups (thiols) in one protein by a disulfide bond in a second protein to form a disulfide bond in the first protein and two reduced sulfhydryls in the second. The oxidized cysteines linked by a disulfide bond is known as cystine.","definition_xrefs":["RESID:AA0025"],"gene_count":0,"genotype_count":0,"name":"obsolete protein cysteine-thiol oxidation (obsolete GO:0006484)","synonyms":[{"name":"protein cysteine-thiol oxidation","type":"exact"}],"termid":"GO:0006484"}


id: MONDO:0018412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare female infertility due to adrenal disorder of genetic origin (obsolete MONDO:0018412)","secondary_identifiers":["Orphanet:400018"],"termid":"MONDO:0018412","xrefs":{"Monarch":{"xref_id":"0018412"}}}


id: PBO:0002900
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.-.-.-","termid":"PBO:0002900"}


id: GO:0050744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via 3'-(8alpha-FMN)-L-histidine.","definition_xrefs":["RESID:AA0353"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via 3'-(8alpha-FMN)-L-histidine (obsolete GO:0050744)","termid":"GO:0050744"}


id: PBO:0046660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"espin","termid":"PBO:0046660"}


id: PATO:0000665
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color brightness which is relatively high.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color brightness","termid":"PATO:0000016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high brightness","synonyms":[{"name":"light","type":"exact"}],"termid":"PATO:0000665"}


id: PBO:0083654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease involved in processing DNA; acts during recombination, repair; promotes template switching during break-induced replication (BIR), causing non-reciprocal translocations (NRTs); cleaves branched structures in complex with Slx1p; involved in interstrand cross-link repair, Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during DSBR via single-strand annealing; relative distribution to nuclear foci increases upon DNA replication stress; FANCP-related factor","termid":"PBO:0083654"}


id: GO:0072356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein complex localization that acts on a chromosome passenger complex; as a result, the complex is transported to, or maintained in, a specific location at the kinetochore. A chromosome passenger complex is a protein complex that contains the BIR-domain-containing protein Survivin, Aurora B kinase, INCENP and Borealin, and coordinates various events based on its location to different structures during the course of mitosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chromosome passenger complex localization to kinetochore","synonyms":[{"name":"CPC complex localization to kinetochore","type":"exact"},{"name":"CPC localization to kinetochore","type":"exact"},{"name":"chromosomal passenger complex localization to kinetochore","type":"exact"},{"name":"chromosome passenger complex localisation to kinetochore","type":"related"}],"termid":"GO:0072356"}


id: GO:0003998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate.","definition_xrefs":["EC:3.6.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"acylphosphatase activity","secondary_identifiers":["MetaCyc:ACYLPHOSPHATASE-RXN","RHEA:14965"],"synonyms":[{"name":"1,3-diphosphoglycerate phosphatase activity","type":"related"},{"name":"GP 1-3","type":"related"},{"name":"Ho 1-3","type":"related"},{"name":"acetic phosphatase activity","type":"related"},{"name":"acetylphosphatase activity","type":"related"},{"name":"acylphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0003998"}


id: PBO:0050134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 44","termid":"PBO:0050134"}


id: FYPO:0002533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abnormal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide","synonyms":[{"name":"abnormal protein localisation to nucleoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during cellular response to H2O2","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0002533"}


id: PBO:0000688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Seb1","termid":"PBO:0000688"}


id: PBO:0038618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin I converting enzyme 3, pseudogene","termid":"PBO:0038618"}


id: MONDO:0011279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation between D7S2453 and D7S525 in the chromosome region 7q31.","definition_xrefs":["DOID:0110472","PMID:15293785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 17","secondary_identifiers":["OMIM:603010","UMLS:C1864276","MEDGEN:355180","GARD:22593","MESH:C566418"],"synonyms":[{"name":"DFNB17","type":"narrow"},{"name":"autosomal recessive deafness 17","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 17","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 17","type":"narrow"},{"name":"deafness, autosomal recessive 17","type":"narrow"}],"termid":"MONDO:0011279","xrefs":{"Monarch":{"xref_id":"0011279"}}}


id: PBO:0006186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_upstream_or_downstream_target","termid":"PBO:0006186"}


id: PBO:0088859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit Cms1","termid":"PBO:0088859"}


id: PBO:0005828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron/ascorbate oxidoreductase family","termid":"PBO:0005828"}


id: MONDO:0018946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rhombencephalosynapsis (RS) is a rare malformation of the cerebellum characterized by the association of agenesis (total or partial) of the vermis and fusion of the cerebellar hemispheres.","definition_xrefs":["Orphanet:59315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"rhombencephalosynapsis","secondary_identifiers":["UMLS:C1866130","MEDGEN:356456","SCTID:442300000","ICD9:742.4","GARD:18855","icd11.foundation:2112180041"],"termid":"MONDO:0018946","xrefs":{"Monarch":{"xref_id":"0018946"}}}


id: PBO:0034545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_cohesin_unloading","termid":"PBO:0034545"}


id: SO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified cytosine DNA base feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_cytosine","termid":"SO:0001963"}


id: FYECO:0000196
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with urea as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, urea nitrogen source","synonyms":[{"name":"glucose minimal medium, urea nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, urea nitrogen source","type":"related"}],"termid":"FYECO:0000196"}


id: MOD:01509
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["OMSSA:213","Unimod:889#Y","OMSSA:178","Unimod:214#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ117Y","type":"exact"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"},{"name":"mTRAQ heavy on Y","type":"exact"}],"termid":"MOD:01509"}


id: PBO:0046256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 5","termid":"PBO:0046256"}


id: GO:0086053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an AV node cardiomyocyte and a bundle of His cardiac muscle cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell communication by electrical coupling","synonyms":[{"name":"atrioventricular node cell to bundle of His cell communication by electrical coupling","type":"exact"}],"termid":"GO:0086053"}


id: PBO:0056561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM8 antisense RNA 1","termid":"PBO:0056561"}


id: PBO:0028709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0028709"}


id: PBO:0046605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 7","termid":"PBO:0046605"}


id: PBO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in splicing (predicted)","termid":"PBO:0001015"}


id: MONDO:0019834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pituitary hormone deficiency from meningeal origin (obsolete MONDO:0019834)","secondary_identifiers":["Orphanet:95505"],"termid":"MONDO:0019834","xrefs":{"Monarch":{"xref_id":"0019834"}}}


id: MONDO:0005852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the left atrioventricular mitral orifice.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve disorder","termid":"MONDO:0003767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"mitral valve stenosis","secondary_identifiers":["SCTID:79619009","UMLS:C0026269","MEDGEN:44466","icd11.foundation:2115139779","MESH:D008946","NANDO:2200302","NANDO:1200963","EFO:0007372","NCIT:C50654","DOID:1754"],"synonyms":[{"name":"mitral stenoses","type":"related"},{"name":"mitral stenosis","type":"exact"},{"name":"mitral valve stenoses","type":"related"},{"name":"stenoses, mitral","type":"related"},{"name":"stenoses, mitral valve","type":"related"},{"name":"stenosis, mitral","type":"related"},{"name":"stenosis, mitral valve","type":"related"},{"name":"valve stenoses, mitral","type":"related"},{"name":"valve stenosis, mitral","type":"related"}],"termid":"MONDO:0005852","xrefs":{"Monarch":{"xref_id":"0005852"}}}


id: PBO:0080601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR35 divergent transcript","termid":"PBO:0080601"}


id: GO:0008671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-galactonate + ATP = 6-phospho-2-dehydro-3-deoxy-D-galactonate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.58","RHEA:16525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"2-dehydro-3-deoxygalactonokinase activity","secondary_identifiers":["MetaCyc:DEHYDDEOXGALACTKIN-RXN","KEGG_REACTION:R03387"],"synonyms":[{"name":"2-keto-3-deoxy-galactonokinase activity","type":"related"},{"name":"2-keto-3-deoxygalactonate kinase (phosphorylating)","type":"related"},{"name":"2-keto-3-deoxygalactonokinase activity","type":"related"},{"name":"2-oxo-3-deoxygalactonate kinase activity","type":"related"},{"name":"ATP:2-dehydro-3-deoxy-D-galactonate 6-phosphotransferase activity","type":"related"}],"termid":"GO:0008671"}


id: PBO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp2","termid":"PBO:0001143"}


id: GO:2000900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cyclodextrin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cyclodextrin metabolic process","synonyms":[{"name":"cyclodextrin metabolism","type":"exact"}],"termid":"GO:2000900"}


id: PBO:0051951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase C","termid":"PBO:0051951"}


id: PBO:0017898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex ATP-dependent DNA helicase subunit Mit1","termid":"PBO:0017898"}


id: MONDO:0014640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An amyotrophic lateral sclerosis that has material basis in mutation in the SQSTM1 gene on chromosome 5q35.","definition_xrefs":["DOID:0110068","PMID:22084127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"behavioral variant of frontotemporal dementia","termid":"MONDO:0017160"},{"relation_name":"is_a","term_name":"frontotemporal dementia with motor neuron disease","termid":"MONDO:0017161"},{"relation_name":"is_a","term_name":"frontotemporal dementia and/or amyotrophic lateral sclerosis","termid":"MONDO:0030923"},{"relation_name":"is_a","term_name":"SQSTM1-related multisystem proteinopathy","termid":"MONDO:0800464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 3","secondary_identifiers":["GARD:16113","UMLS:C4225326","MEDGEN:897127","OMIM:616437"],"synonyms":[{"name":"FTDALS3","type":"exact"},{"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis 3","type":"exact"},{"name":"frontotemporal dementia and/or amyotrophic lateral sclerosis type 3","type":"exact"}],"termid":"MONDO:0014640","xrefs":{"Monarch":{"xref_id":"0014640"}}}


id: GO:0035917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a calcium channel in another organism.","definition_xrefs":["PMID:20920515","GOC:bf","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium channel activity in another organism (obsolete GO:0035917)","synonyms":[{"name":"down-regulation of calcium channel activity in other organism","type":"exact"},{"name":"downregulation of calcium channel activity in other organism","type":"exact"},{"name":"inhibition of calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035917"}


id: GO:1990407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcitonin gene-related peptide (CGRP).","definition_xrefs":["PMID:10882736","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family binding","termid":"GO:0097644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calcitonin gene-related peptide binding","synonyms":[{"name":"CGRP polypeptide binding","type":"exact"},{"name":"calcitonin-gene-related peptide binding","type":"exact"},{"name":"calcitonin-gene-related polypeptide binding","type":"exact"}],"termid":"GO:1990407"}


id: GO:2000795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000794"},{"relation_name":"negatively_regulates","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000795"}


id: GO:0046815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the viral genome is retained within the capsid during genome cleavage and packaging.","definition_xrefs":["PMID:9696839"],"gene_count":0,"genotype_count":0,"name":"obsolete genome retention in viral capsid (obsolete GO:0046815)","termid":"GO:0046815"}


id: GO:0034599
data:
  {"annotated_genes":["SJAG_02433","SJAG_00996","SJAG_01292","SJAG_03414","SJAG_04311","SJAG_02135","SJAG_01216","SJAG_01855","SJAG_04788","SJAG_03924","SJAG_00984","SJAG_04632","SJAG_02495","SJAG_03896","SJAG_03828","SJAG_01162","SJAG_00365","SJAG_00419","SJAG_05181","SJAG_02592","SJAG_03166","SJAG_02858","SJAG_01084","SJAG_02515","SJAG_02945","SJAG_02249","SJAG_04125","SJAG_06611","SJAG_02044","SJAG_00141","SJAG_06621","SJAG_03903","SJAG_04403","SJAG_01734","SJAG_04399","SJAG_03303","SJAG_03653","SJAG_04953","SJAG_04823","SJAG_02485","SJAG_00027","SJAG_06622","SJAG_02573","SJAG_04036","SJAG_03330","SJAG_01199","SJAG_00668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63915,66930,68004,70050,73128,73477,74815,74971,75415,76610,76693,77383,78835,88322,89857,89955,90652,91922,93331,95320,95744,97378,101611,107555,108685,108686,108687,108688,108689,108690,108691,114211],"is_not":false,"summary":null,"term":"GO:0034599"},{"annotations":[94953,108588,118031,104806,117110,99759],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[92902,64937,89163,74105,68420,88741,58070,99035,60844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02135":null,"SJAG_02249":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04125":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxidative stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-3299685","Reactome:R-HSA-9707564"],"synonyms":[{"name":"adaptive response to oxidative stress","type":"narrow"}],"termid":"GO:0034599","terms_by_termid":{"GO:0019430":null,"GO:0034599":null,"GO:0061692":null}}


id: FYPO:0005617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during cellular response to bleomycin","termid":"FYPO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to bleomycin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to bleomycin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to bleomycin","type":"exact"}],"termid":"FYPO:0005617"}


id: PBO:0071848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 43","termid":"PBO:0071848"}


id: SO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic constant region of an immunoglobulin gene which closely resembles a known functional Imunoglobulin constant gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_pseudogene","termid":"SO:0002098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_C_pseudogene","synonyms":[{"name":"IG C pseudogene","type":"exact"}],"termid":"SO:0002100"}


id: MONDO:0008224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperkalemic periodic paralysis (HyperPP) is a muscle disorder characterized by episodic attacks of muscle weakness associated with an increase in serum potassium concentration.","definition_xrefs":["Orphanet:682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial periodic paralysis","termid":"MONDO:0000995"},{"relation_name":"is_a","term_name":"SCN4A-related channelopathy","termid":"MONDO:0800468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperkalemic periodic paralysis","secondary_identifiers":["NCIT:C123429","GARD:195","MEDGEN:68665","DOID:14451","OMIM:170500","UMLS:C0238357","icd11.foundation:1308452752","SCTID:304737009","NANDO:1200504","MESH:D020513"],"synonyms":[{"name":"Gamstorp disease","type":"exact"},{"name":"Gamstorp episodic adynamy","type":"exact"},{"name":"HYPP","type":"exact"},{"name":"adynamia episodica hereditaria","type":"exact"},{"name":"adynamia episodica hereditaria with or without myotonia","type":"exact"},{"name":"familial hyperPP","type":"exact"},{"name":"familial hyperkalemic periodic paralysis","type":"exact"},{"name":"familial hyperkalemic periodic paralysis (disorder) [ambiguous]","type":"exact"},{"name":"hyperKPP","type":"exact"},{"name":"hyperPP","type":"exact"},{"name":"hyperkalemic PP","type":"exact"},{"name":"hyperkalemic periodic paralysis","type":"exact"},{"name":"hyperkalemic periodic paralysis, type 2","type":"exact"},{"name":"normokalemic periodic paralysis, potassium-sensitive","type":"exact"},{"name":"primary hyperPP","type":"exact"},{"name":"primary hyperkalemic periodic paralysis","type":"exact"},{"name":"sodium channel muscle disease","type":"related"}],"termid":"MONDO:0008224","xrefs":{"Monarch":{"xref_id":"0008224"}}}


id: MONDO:0016006
data:
  {"annotated_genes":["SJAG_04540","SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019569"},{"annotations":[85845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019570"}]},"cv_name":"mondo","definition":"A multisystem condition characterized by short stature, a characteristic facial appearance, premature aging, photosensitivity, progressive neurological dysfunction, and intellectual deficit.","definition_xrefs":["Orphanet:191"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"excluded_subClassOf","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"},{"relation_name":"excluded_subClassOf","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","termid":"MONDO:0019589"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"excluded_subClassOf","term_name":"DNA repair disease","termid":"MONDO:0021190"},{"relation_name":"excluded_subClassOf","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04114":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0019303","MONDO:0021190"],"is_obsolete":false,"name":"Cockayne syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6122","MEDGEN:40363","NANDO:1200677","NANDO:2200832","UMLS:C0009207","NCIT:C9460","ICD9:759.89","DOID:2962","MedDRA:10009835","SCTID:21086008","NORD:982","icd11.foundation:1206275070","MESH:D003057"],"synonyms":[{"name":"Cockayne's syndrome","type":"related"},{"name":"Neill-Dingwall syndrome","type":"exact"},{"name":"dwarfism-retinal atrophy-deafness syndrome","type":"related"},{"name":"progeria-like syndrome","type":"related"},{"name":"progeroid nanism","type":"related"}],"termid":"MONDO:0016006","terms_by_termid":{"MONDO:0019569":null,"MONDO:0019570":null},"xrefs":{"Monarch":{"xref_id":"0016006"}}}


id: PBO:0066943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 245","termid":"PBO:0066943"}


id: MONDO:1010636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor XI deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor XI deficiency, non-human animal","termid":"MONDO:1010073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor XI deficiency, dog","secondary_identifiers":["OMIA:000363-9615"],"termid":"MONDO:1010636","xrefs":{"Monarch":{"xref_id":"1010636"}}}


id: PBO:0055499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2933","termid":"PBO:0055499"}


id: PBO:0074957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 113-8","termid":"PBO:0074957"}


id: PBO:0063006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b catalytic subunit 2","termid":"PBO:0063006"}


id: PBO:0082072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate kinase; catalyzes transfer of high-energy phosphoryl groups from the acyl phosphate of 1,3-bisphosphoglycerate to ADP to produce ATP; key enzyme in glycolysis and gluconeogenesis","termid":"PBO:0082072"}


id: PBO:0034642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_arsenite_ion","termid":"PBO:0034642"}


id: GO:1902340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chromosome condensation.","definition_xrefs":["GOC:TermGenie","PMID:23219725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome condensation","termid":"GO:0060623"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"chromosome condensation","termid":"GO:0030261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chromosome condensation","synonyms":[{"name":"down regulation of chromosome condensation","type":"exact"},{"name":"down regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"down regulation of nuclear chromosome condensation","type":"exact"},{"name":"down-regulation of chromosome condensation","type":"exact"},{"name":"down-regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"down-regulation of nuclear chromosome condensation","type":"exact"},{"name":"downregulation of chromosome condensation","type":"exact"},{"name":"downregulation of eukaryotic chromosome condensation","type":"exact"},{"name":"downregulation of nuclear chromosome condensation","type":"exact"},{"name":"inhibition of chromosome condensation","type":"narrow"},{"name":"inhibition of eukaryotic chromosome condensation","type":"narrow"},{"name":"inhibition of nuclear chromosome condensation","type":"narrow"},{"name":"negative regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"negative regulation of nuclear chromosome condensation","type":"exact"}],"termid":"GO:1902340"}


id: GO:0141110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a transporter.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"},{"relation_name":"is_a","term_name":"transporter regulator activity","termid":"GO:0141108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0140678","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"transporter inhibitor activity","termid":"GO:0141110"}


id: GO:0046538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate; this reaction mechanism uses 2,3-bisphosphoglycerate as a phosphate donor.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity (obsolete GO:0046538)","termid":"GO:0046538"}


id: MONDO:0100138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mitochondrial myopathy caused by defects in the MICOS subunit gene APOO (MIC26). Modelling in yeast and flies demonstrate an inability to insert MICOS complex into the inner mitohondrial membrane. Associated symptoms include, lactic acidosis, cognitive impairment and autistic features.","definition_xrefs":["PMID:32439808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005336","MONDO:0002320","MONDO:0005066"],"is_obsolete":false,"name":"X-linked recessive mitochondrial myopathy","synonyms":[{"name":"X-linked recessive mitochondrial myopathy, lactic acidosis, cognitive impairment and autistic features","type":"exact"}],"termid":"MONDO:0100138","xrefs":{"Monarch":{"xref_id":"0100138"}}}


id: GO:0034153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 6 signaling pathway","termid":"GO:0034151"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"positive regulation of TLR6 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034153"}


id: PBO:0090915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tryptophan-tRNA ligase Msw1","termid":"PBO:0090915"}


id: PBO:0075575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin family member 4","termid":"PBO:0075575"}


id: PBO:0059008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocyte to macrophage differentiation associated 2","termid":"PBO:0059008"}


id: PR:Q09788
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- asl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkali-sensitive linkage protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.10c","synonyms":[{"name":"Spom972h-asl1","type":"exact"}],"termid":"PR:Q09788"}


id: PBO:0056532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylcrotonyl-CoA carboxylase subunit 1","termid":"PBO:0056532"}


id: FYPO:0001066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of threonine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal threonine import","termid":"FYPO:0001065"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased threonine import","synonyms":[{"name":"decreased L-threonine import","type":"exact"},{"name":"decreased L-threonine import across plasma membrane","type":"exact"},{"name":"decreased threonine import during mitotic cell cycle","type":"related"},{"name":"decreased threonine import during vegetative growth","type":"exact"},{"name":"decreased threonine import into cell","type":"exact"},{"name":"decreased threonine uptake","type":"exact"},{"name":"reduced threonine import","type":"exact"}],"termid":"FYPO:0001066"}


id: PBO:0000616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prh1 (predicted)","termid":"PBO:0000616"}


id: GO:0050191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + GTP = 3-phospho-D-glyceroyl phosphate + GDP + H+.","definition_xrefs":["RHEA:23332","EC:2.7.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoglycerate kinase (GTP) activity","secondary_identifiers":["KEGG_REACTION:R01517","MetaCyc:PHOSPHOGLYCERATE-KINASE-GTP-RXN"],"synonyms":[{"name":"GTP:3-phospho-D-glycerate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0050191"}


id: PBO:0031153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_myo-inositol_import","termid":"PBO:0031153"}


id: PR:P21547
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- var1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P21547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein var1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.08","synonyms":[{"name":"Spom972h-var1","type":"exact"}],"termid":"PR:P21547"}


id: MONDO:0013533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperlipidemia due to hepatic triacylglycerol lipase deficiency is a rare, genetic hyperalphalipoproteinemia characterized by elevated plasma cholesterol and triglyceride (TG) levels with a marked TG enrichment of low- and high-density lipoproteins (HDL), presence of circulating beta-very low density lipoproteins and elevated HDL cholesterol levels, in the presence of a very low, or undetectable, postheparin plasma hepatic lipase activity. Premature atherosclerosis and/or coronary heart disease may be associated.","definition_xrefs":["Orphanet:140905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperlipidemia","termid":"MONDO:0001336"},{"relation_name":"is_a","term_name":"hyperalphalipoproteinemia","termid":"MONDO:0015903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"hyperlipidemia due to hepatic triglyceride lipase deficiency","secondary_identifiers":["GARD:12864","SCTID:720940008","UMLS:C3151466","OMIM:614025","MEDGEN:462816"],"synonyms":[{"name":"HL deficiency","type":"related"},{"name":"hepatic lipase deficiency","type":"related"},{"name":"hyperlipidemia due to HL deficiency","type":"exact"},{"name":"hyperlipidemia due to HTGL deficiency","type":"exact"},{"name":"hyperlipidemia due to hepatic lipase deficiency","type":"exact"},{"name":"hyperlipidemia due to hepatic triacylglycerol lipase deficiency","type":"related"},{"name":"lipc deficiency","type":"related"}],"termid":"MONDO:0013533","xrefs":{"Monarch":{"xref_id":"0013533"}}}


id: PBO:0075058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-21","termid":"PBO:0075058"}


id: FYPO:0006593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of spindle microtubules from the spindle pole body (SPB) occurs to a lesser extent than normal.","definition_xrefs":["PMID:19942852","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic microtubule nucleation","termid":"FYPO:0006336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule nucleation from spindle pole body","synonyms":[{"name":"decreased microtubule nucleation from spindle pole body during mitotic cell cycle","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation by spindle pole body","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from SPB","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during mitotic M phase","type":"exact"},{"name":"decreased mitotic spindle microtubule nucleation from spindle pole body during vegetative growth","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic SPB","type":"exact"},{"name":"decreased spindle microtubule nucleation from mitotic spindle pole body","type":"exact"},{"name":"reduced mitotic spindle microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0006593"}


id: PBO:0017784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca1 (predicted)","termid":"PBO:0017784"}


id: PBO:0028902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028902"}


id: PBO:0074204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 13","termid":"PBO:0074204"}


id: MONDO:1012472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"horn cancer, non-human animal","termid":"MONDO:1011824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horn cancer, zebu cattle","secondary_identifiers":["OMIA:001859-9915"],"termid":"MONDO:1012472","xrefs":{"Monarch":{"xref_id":"1012472"}}}


id: GO:0010678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cellular process that decreases the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates carried out by repression of transcription.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-templated (obsolete GO:0010678)","synonyms":[{"name":"negative regulation of cellular carbohydrate metabolic process by negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"negative regulation of cellular carbohydrate metabolic process by repression of transcription","type":"exact"},{"name":"negative regulation of cellular carbohydrate metabolic process by transcriptional repression","type":"exact"}],"termid":"GO:0010678"}


id: PBO:0089963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator Ncb2","termid":"PBO:0089963"}


id: MONDO:0004724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the submandibular gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"major salivary gland carcinoma","termid":"MONDO:0006284"},{"relation_name":"is_a","term_name":"submandibular gland neoplasm","termid":"MONDO:0021244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"submandibular gland cancer","secondary_identifiers":["SCTID:363380002","UMLS:C0153360","NCIT:C3526","MEDGEN:57782","ICD9:142.1","NCIT:C8396","DOID:9173"],"synonyms":[{"name":"cancer of submandibular gland","type":"exact"},{"name":"carcinoma of submandibular gland","type":"narrow"},{"name":"carcinoma of the submandibular gland","type":"narrow"},{"name":"malignant neoplasm of submandibular gland","type":"exact"},{"name":"malignant neoplasm of submaxillary gland","type":"exact"},{"name":"malignant submandibular gland neoplasm","type":"exact"},{"name":"malignant tumor of submandibular gland","type":"exact"},{"name":"malignant tumor of the submandibular gland","type":"exact"},{"name":"malignant tumour of submandibular gland","type":"exact"},{"name":"malignant tumour of the submandibular gland","type":"exact"},{"name":"submandibular gland cancer","type":"exact"},{"name":"submandibular gland carcinoma","type":"narrow"}],"termid":"MONDO:0004724","xrefs":{"Monarch":{"xref_id":"0004724"}}}


id: PBO:0003556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase Ptp4 (predicted)","termid":"PBO:0003556"}


id: GO:0050531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(alpha-D-mannosyl)-3-phosphoglycerate + H2O = 2-(alpha-D-mannosyl)-D-glycerate + phosphate.","definition_xrefs":["EC:3.1.3.70","RHEA:19309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"mannosyl-3-phosphoglycerate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R05790","MetaCyc:3.1.3.70-RXN"],"synonyms":[{"name":"alpha-D-mannosyl-3-phosphoglycerate phosphohydrolase activity","type":"related"}],"termid":"GO:0050531"}


id: GO:0002408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a myeloid dendritic cell in response to an external stimulus.","definition_xrefs":["ISBN:0781735149","PMID:16056255","GOC:add","PMID:15814331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}


id: GO:0050907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a chemical stimulus is received and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"part_of","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of chemical stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory transduction of chemical stimulus during sensory perception","type":"exact"}],"termid":"GO:0050907"}


id: PR:Q10153
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDP-diacylglycerol--inositol 3-phosphatidyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15362:SF2","OMA:SCHPO00257","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.08","secondary_identifiers":["UniProtKB:Q10153"],"synonyms":[{"name":"PI synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDIPT","type":"exact"},{"name":"phosphatidylinositol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10153"}


id: MOD:01588
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-cholinephosphoryl-L-serine.","definition_xrefs":["PubMed:16825186","RESID:AA0498","PubMed:16949362","PubMed:15249686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-cholinephosphoryl-L-serine","synonyms":[{"name":"2-[([(2S)-2-amino-2-carboxyethoxy][hydroxy]phosphoryl)oxy]-N,N,N-trimethylethanaminium","type":"exact"},{"name":"2-[([(2S)-2-azanyl-2-carboxyethoxy][hydroxy]phosphoryl)oxy]-N,N,N-trimethylethanazanium","type":"exact"},{"name":"MOD_RES O-(2-cholinephosphoryl)serine","type":"exact"},{"name":"O-cholinephosphoryl-L-serine","type":"exact"},{"name":"O3-[(2-[trimethylammonio]ethyl)phosphoryl]-L-serine","type":"exact"},{"name":"O3-phosphocholine-L-serine","type":"exact"},{"name":"serine choline phosphate","type":"exact"},{"name":"serine choline phosphodiester","type":"exact"}],"termid":"MOD:01588"}


id: GO:0070901
data:
  {"annotated_genes":["SJAG_00255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77885],"is_not":false,"summary":null,"term":"GO:0070901"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to specific residues in a mitochondrial tRNA molecule.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00255":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tRNA methylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070901","terms_by_termid":{"GO:0070901":null}}


id: GO:0035596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a methylthioether group (-SCH3) to a nucleic acid or protein acceptor.","definition_xrefs":["GOC:jh2","PMID:20472640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylthioltransferase activity","termid":"GO:0050497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"methylthiotransferase activity","synonyms":[{"name":"MTTase","type":"exact"}],"termid":"GO:0035596"}


id: MONDO:0024477
data:
  {"annotated_genes":["SJAG_02049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the liver parenchyma or intrahepatic bile ducts. Representative examples of benign neoplasms include hepatocellular adenoma, and bile duct adenoma. Representative examples of malignant neoplasms include hepatocellular carcinoma, intrahepatic cholangiocarcinoma, and lymphoma.","definition_xrefs":["NCIT:C7103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"},{"relation_name":"is_a","term_name":"hepatobiliary neoplasm","termid":"MONDO:0002514"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02049":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver and intrahepatic bile duct neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C7106","DOID:916","SCTID:126851005","MEDGEN:232599","UMLS:C1333976","ONCOTREE:LIVER"],"synonyms":[{"name":"epithelial hepatic and intrahepatic bile duct neoplasm","type":"exact"},{"name":"hepatic and intrahepatic bile duct neoplasm","type":"exact"},{"name":"liver and intrahepatic bile duct epithelial neoplasm","type":"exact"},{"name":"liver and intrahepatic bile duct neoplasm","type":"exact"},{"name":"liver neoplasm","type":"exact"},{"name":"liver neoplasm (disease)","type":"exact"},{"name":"liver tumor","type":"exact"},{"name":"liver tumour","type":"exact"},{"name":"neoplasm of liver","type":"exact"},{"name":"tumor of liver","type":"exact"},{"name":"tumour of liver","type":"exact"}],"termid":"MONDO:0024477","terms_by_termid":{"MONDO:0007256":null},"xrefs":{"Monarch":{"xref_id":"0024477"}}}


id: PBO:0088877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein of the mitochondrial inner membrane Cmc2","termid":"PBO:0088877"}


id: GO:0071313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to caffeine","termid":"GO:0031000"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to purine-containing compound","termid":"GO:0071415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to caffeine","termid":"GO:0071313"}


id: PBO:0004897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku domain protein Pku80","termid":"PBO:0004897"}


id: PBO:0081489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 385A","termid":"PBO:0081489"}


id: MONDO:0033656
data:
  {"annotated_genes":["SJAG_06392","SJAG_06002","SJAG_04450"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85527,85528,85529],"is_not":false,"summary":null,"term":"MONDO:0033656"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04450":null,"SJAG_06002":null,"SJAG_06392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 21","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436727","DOID:0070506","OMIM:619065","MEDGEN:1732562","GARD:16418"],"synonyms":[{"name":"MC4DN21","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 21","type":"exact"}],"termid":"MONDO:0033656","terms_by_termid":{"MONDO:0033656":null},"xrefs":{"Monarch":{"xref_id":"0033656"}}}


id: GO:0090506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process that results in the initiation of an axillary shoot meristem. An axillary shoot meristem is a shoot meristem formed in the axil of a leaf.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem initiation","termid":"GO:0010014"},{"relation_name":"part_of","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axillary shoot meristem initiation","synonyms":[{"name":"axillary bud meristem initiation","type":"related"}],"termid":"GO:0090506"}


id: PBO:0047448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIIa","termid":"PBO:0047448"}


id: MOD:01112
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinoyl lysine","synonyms":[{"name":"nicotinyl lysyl","type":"exact"}],"termid":"MOD:01112"}


id: PBO:0083524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RRP15, which is required for ribosomal RNA processing","termid":"PBO:0083524"}


id: GO:0019365
data:
  {"annotated_genes":["SJAG_03298","SJAG_00957","SJAG_01500","SJAG_04467"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[79910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[88779,109366,90415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"Any process that generates a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide biosynthetic process","termid":"GO:0019363"},{"relation_name":"is_a","term_name":"nucleotide salvage","termid":"GO:0043173"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01500":null,"SJAG_03298":null,"SJAG_04467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyridine nucleotide salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleotide cycling","type":"exact"}],"termid":"GO:0019365","terms_by_termid":{"GO:0019358":null,"GO:0034355":null,"GO:0034356":null}}


id: PBO:0055206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2631","termid":"PBO:0055206"}


id: MOD:01417
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a monomethylated proline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated proline","termid":"MOD:00712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated proline","synonyms":[{"name":"Me1Pro","type":"exact"}],"termid":"MOD:01417"}


id: MONDO:0003412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant hemangiopericytoma arising from the retroperitoneum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"retroperitoneal neoplasm","termid":"MONDO:0024645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retroperitoneal hemangiopericytoma","secondary_identifiers":["MEDGEN:277597","NCIT:C5386","UMLS:C1335777","DOID:5373"],"synonyms":[{"name":"retroperitoneal space hemangiopericytoma","type":"exact"}],"termid":"MONDO:0003412","xrefs":{"Monarch":{"xref_id":"0003412"}}}


id: PBO:0087690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport and NPC biogenesis; also plays roles in several processes that may require localization of genes or chromosomes at the nuclear periphery, including double-strand break repair, transcription and chromatin silencing; homologous to human NUP107","termid":"PBO:0087690"}


id: GO:0004476
data:
  {"annotated_genes":["SJAG_02648"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77780],"is_not":false,"summary":null,"term":"GO:0004476"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannose 6-phosphate = D-fructose 6-phosphate.","definition_xrefs":["RHEA:12356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannose-6-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:5.3.1.8","MetaCyc:MANNPISOM-RXN","Reactome:R-HSA-532549","Reactome:R-HSA-3781832"],"synonyms":[{"name":"D-mannose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-mannose-6-phosphate ketol-isomerase activity","type":"related"},{"name":"mannose phosphate isomerase activity","type":"related"},{"name":"phosphohexoisomerase activity","type":"broad"},{"name":"phosphohexomutase activity","type":"broad"},{"name":"phosphomannoisomerase activity","type":"related"},{"name":"phosphomannose isomerase activity","type":"related"}],"termid":"GO:0004476","terms_by_termid":{"GO:0004476":null}}


id: GO:0004517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+.","definition_xrefs":["EC:1.14.13.39","RHEA:19897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitric-oxide synthase activity","secondary_identifiers":["MetaCyc:NITRIC-OXIDE-SYNTHASE-RXN","Reactome:R-HSA-418436","Reactome:R-HSA-202127"],"synonyms":[{"name":"L-arginine,NADPH:oxygen oxidoreductase (nitric-oxide-forming) activity","type":"related"},{"name":"NADPH-diaphorase activity","type":"related"},{"name":"NO synthase activity","type":"related"},{"name":"endothelium-derived relaxation factor-forming enzyme activity","type":"related"},{"name":"endothelium-derived relaxing factor synthase activity","type":"related"},{"name":"nitric oxide synthase activity","type":"exact"},{"name":"nitric oxide synthetase activity","type":"related"},{"name":"nitric-oxide synthetase activity","type":"related"}],"termid":"GO:0004517"}


id: PBO:0073974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 25","termid":"PBO:0073974"}


id: GO:0004158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-dihydroorotate + O2 = H2O2 + orotate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroorotate oxidase activity (obsolete GO:0004158)","synonyms":[{"name":"(S)-dihydroorotate:oxygen oxidoreductase activity","type":"related"},{"name":"4,5-L-dihydroorotate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0004158"}


id: PBO:0069031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 276, pseudogene","termid":"PBO:0069031"}


id: PBO:0067414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 525, pseudogene","termid":"PBO:0067414"}


id: PBO:0084388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity phosphate transporter; acts upstream of Pho81p in regulation of the PHO pathway; deletion of pho84, pho87, pho89, pho90, and pho91 causes synthetic lethality; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth; PHO90 has a paralog, PHO87, that arose from the whole genome duplication","termid":"PBO:0084388"}


id: PBO:0051742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 9","termid":"PBO:0051742"}


id: MONDO:0004572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An affective disorder characterized by periods of depression and hypomania. These may be separated by periods of normal mood.","definition_xrefs":["MESH:D003527"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclothymic disorder","secondary_identifiers":["ICD9:301.1","ICD9:301.13","MEDGEN:1198","ICD10CM:F34.0","ICD9:301.10","icd11.foundation:1427638883","SCTID:76105009","DOID:845","UMLS:C0010598"],"synonyms":[{"name":"affective personality disorder","type":"exact"},{"name":"cycloid personality","type":"exact"},{"name":"cyclothymia","type":"exact"},{"name":"cyclothymic personality","type":"exact"}],"termid":"MONDO:0004572","xrefs":{"Monarch":{"xref_id":"0004572"}}}


id: PBO:0083369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps verified gene GAL11; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO)","termid":"PBO:0083369"}


id: PBO:0074787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 8","termid":"PBO:0074787"}


id: GO:0019254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carnitine, where metabolism is linked to CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine metabolic process","termid":"GO:0009437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carnitine metabolic process, CoA-linked","secondary_identifiers":["MetaCyc:CARNMET-PWY"],"synonyms":[{"name":"carnitine metabolism, CoA-linked","type":"exact"}],"termid":"GO:0019254"}


id: PBO:0028538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_cellular_response_to_salt_stress","termid":"PBO:0028538"}


id: PBO:0113538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane zinc transporter; transports zinc from storage in vacuole to cytoplasm when needed; transcription induced under conditions of zinc deficiency; targeted to vacuole via AP-3 pathway","termid":"PBO:0113538"}


id: MOD:00983
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asp transamidation with piperidine","termid":"MOD:00983"}


id: GO:0035462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the diencephalon with respect to the left and right halves.","definition_xrefs":["GOC:dgh","PMID:15084459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right asymmetry in nervous system","termid":"GO:0035545"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of left/right asymmetry in diencephalon","termid":"GO:0035462"}


id: GO:0015030
data:
  {"annotated_genes":["SJAG_01761","SJAG_03901"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95789,114857],"is_not":false,"summary":null,"term":"GO:0015030"}]},"cv_name":"cellular_component","definition":"A class of nuclear body, first seen after silver staining by Ramon y Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA.","definition_xrefs":["NIF_Subcellular:nlx_subcell_090901","PMID:7559785","PMID:11031238","PMID:10944589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01761":null,"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Cajal body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cajal_body"],"synonyms":[{"name":"Gemini of coiled bodies","type":"related"},{"name":"Gems","type":"related"},{"name":"coiled body","type":"exact"}],"termid":"GO:0015030","terms_by_termid":{"GO:0015030":null}}


id: PBO:0066228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 34","termid":"PBO:0066228"}


id: PBO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Akr1 (predicted)","termid":"PBO:0000452"}


id: GO:0008123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + O2 + reduced [NADPH--hemoprotein reductase] = 7alpha-hydroxycholesterol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:21812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 7-alpha-hydroxylase activity","termid":"GO:0008387"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholesterol 7-alpha-monooxygenase activity","secondary_identifiers":["EC:1.14.14.23","Reactome:R-HSA-192051","MetaCyc:CHOLESTEROL-7-ALPHA-MONOOXYGENASE-RXN"],"synonyms":[{"name":"cholesterol 7-alpha-hydroxylase activity","type":"exact"},{"name":"cholesterol 7alpha-hydroxylase activity","type":"related"},{"name":"cholesterol 7alpha-monooxygenase activity","type":"related"},{"name":"cholesterol,NADPH:oxygen oxidoreductase (7alpha-hydroxylating)","type":"related"},{"name":"cytochrome P450 CYP7A1","type":"narrow"}],"termid":"GO:0008123"}


id: PBO:0043308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 1 pseudogene 1","termid":"PBO:0043308"}


id: MONDO:0013103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing epilepsy, idiopathic generalized, in which the cause of the disease is a mutation in the GABRD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 10","secondary_identifiers":["MEDGEN:414062","DOID:0111292","UMLS:C2751603","OMIM:613060"],"synonyms":[{"name":"EIG10","type":"exact"},{"name":"GEFS+, type 5, susceptibility to","type":"related"},{"name":"GEFS+5, susceptibility to","type":"related"},{"name":"GEFSP5, susceptibility to","type":"related"},{"name":"epilepsy, idiopathic generalized, 10","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 10","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 10","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 7","type":"related"},{"name":"generalised epilepsy with febrile seizures plus, type 5, susceptibility to","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 5, susceptibility to","type":"related"},{"name":"susceptibility to idiopathic generalised epilepsy 10","type":"exact"},{"name":"susceptibility to idiopathic generalized epilepsy 10","type":"exact"}],"termid":"MONDO:0013103","xrefs":{"Monarch":{"xref_id":"0013103"}}}


id: GO:0043557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the frequency, rate or extent of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"part_of","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}


id: PBO:0042788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 162","termid":"PBO:0042788"}


id: PBO:0074263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 5A1","termid":"PBO:0074263"}


id: GO:0070041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing C5-methyluridine.","definition_xrefs":["GOC:mah","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"rRNA (uridine) methyltransferase activity","termid":"GO:0016436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"rRNA (uridine-C5-)-methyltransferase activity","termid":"GO:0070041"}


id: MONDO:0017856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete ARX-related epileptic encephalopathy (obsolete MONDO:0015921)","termid":"MONDO:0015921"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked spasticity-intellectual disability-epilepsy syndrome","secondary_identifiers":["GARD:16622","UMLS:C4510949","MEDGEN:1376165","Orphanet:3175"],"termid":"MONDO:0017856","xrefs":{"Monarch":{"xref_id":"0017856"}}}


id: PBO:0027445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_nucleosome_occupancy_at_CRE_site","termid":"PBO:0027445"}


id: MONDO:0035661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare multiple congenital anomalies/dysmorphic syndrome characterized by global developmental delay or regression, variable congenital heart defects (such as patent ductus arteriosus, atrial or ventricular septal defects, and double outlet right ventricle, among others), and dysmorphic features (including ptosis, epicanthal folds, abnormally set/dysplastic ears, low hairline or excess nuchal skin, wide-spaced/inverted nipples, umbilical hernia or diastasis recti, and digital anomalies). Additional variable manifestations are hyper- or hypotonia, seizures, hearing loss, cortical blindness, and optic atrophy. Brain imaging may show cerebral and cerebellar atrophy and hydrocephalus.","definition_xrefs":["Orphanet:592570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF7-associated heart defect-digital anomalies-facial dysmorphism-motor and speech delay syndrome","secondary_identifiers":["MEDGEN:1809140","UMLS:C5681633","GARD:22370"],"termid":"MONDO:0035661","xrefs":{"Monarch":{"xref_id":"0035661"}}}


id: PBO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase Gly1 (predicted)","termid":"PBO:0001582"}


id: PBO:0027774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_viridicatumtoxin","termid":"PBO:0027774"}


id: PBO:0040294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2","termid":"PBO:0040294"}


id: PBO:0043140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 8","termid":"PBO:0043140"}


id: MONDO:0015639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign partial epilepsy with secondarily generalized seizures in infancy is a rare infantile epilepsy syndrome characterized by seizures presenting with motion arrest and staring. They are followed by generalized tonic-clonic convulsions with normal interictal EEG and focal paroxysmal discharges, followed by generalization in ictal EEG. Seizures usually occur in clusters and are responsive to treatment. Psychomotor development is normal.","definition_xrefs":["Orphanet:166302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign non-familial infantile seizures","termid":"MONDO:0015637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign partial epilepsy with secondarily generalized seizures in infancy","secondary_identifiers":["GARD:20073","icd11.foundation:413225821","UMLS:C4749728","MEDGEN:1656339"],"termid":"MONDO:0015639","xrefs":{"Monarch":{"xref_id":"0015639"}}}


id: PBO:0082817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved mitochondrial protein of unknown function; processed by both mitochondrial processing peptidase and mitochondrial octapeptidyl aminopeptidase; gene contains the nested antisense gene NAG1","termid":"PBO:0082817"}


id: PBO:0056488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial antiviral signaling protein","termid":"PBO:0056488"}


id: PBO:0042415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 26 pseudogene 1","termid":"PBO:0042415"}


id: PBO:0054103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1465","termid":"PBO:0054103"}


id: GO:0075302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi Basidiomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"regulates","term_name":"basidiospore formation","termid":"GO:0034295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of basidiospore formation","termid":"GO:0075302"}


id: PBO:0002397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-pseudouridine synthase (predicted)","termid":"PBO:0002397"}


id: PBO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.20","termid":"PBO:0001558"}


id: PBO:0063105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARK7 pseudogene 1","termid":"PBO:0063105"}


id: GO:1904884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomerase catalytic core complex assembly.","definition_xrefs":["GOC:TermGenie","PMID:26586433","GO_REF:0000058","GOC:BHF_telomere","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of telomerase catalytic core complex assembly","termid":"GO:1904882"},{"relation_name":"positively_regulates","term_name":"telomerase catalytic core complex assembly","termid":"GO:1904868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomerase catalytic core complex assembly","synonyms":[{"name":"activation of TERT-TERC complex assembly","type":"related"},{"name":"activation of TERT-TERC complex formation","type":"related"},{"name":"activation of telomerase catalytic core complex assembly","type":"narrow"},{"name":"activation of telomerase catalytic core complex formation","type":"narrow"},{"name":"positive regulation of TERT-TERC complex assembly","type":"related"},{"name":"positive regulation of TERT-TERC complex formation","type":"related"},{"name":"positive regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"up regulation of TERT-TERC complex assembly","type":"related"},{"name":"up regulation of TERT-TERC complex formation","type":"related"},{"name":"up regulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"up regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"up-regulation of TERT-TERC complex assembly","type":"related"},{"name":"up-regulation of TERT-TERC complex formation","type":"related"},{"name":"up-regulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"up-regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"upregulation of TERT-TERC complex assembly","type":"related"},{"name":"upregulation of TERT-TERC complex formation","type":"related"},{"name":"upregulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"upregulation of telomerase catalytic core complex formation","type":"exact"}],"termid":"GO:1904884"}


id: MONDO:0018856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lichen amyloidosis is a rare chronic form of cutaneous amyloidosis, a skin disease characterized by the accumulation of amyloid deposits in the dermis, clinically characterized by the development of pruritic, often pigmented, hyperkeratotic papules on trunk and extremities, especially on the shins, and histologically by the deposition of amyloid or amyloid-like proteins in the papillary dermis.","definition_xrefs":["Orphanet:49804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous amyloidosis","termid":"MONDO:0015301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"lichen amyloidosis","secondary_identifiers":["ICD10EXP:E85.4+","ICD10EXP:L99.0*","MEDGEN:1830282","GARD:18839","SCTID:718105008","UMLS:C5779561"],"synonyms":[{"name":"amyloid lichen","type":"exact"},{"name":"lichen amyloidosus","type":"exact"}],"termid":"MONDO:0018856","xrefs":{"Monarch":{"xref_id":"0018856"}}}


id: PBO:0030126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_nickel_level","termid":"PBO:0030126"}


id: PBO:0028806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028806"}


id: PBO:0065925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB, member RAS oncogene family like 6","termid":"PBO:0065925"}


id: MONDO:0018089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Double outlet right ventricle (DORV) is a rare cono-truncal anomaly in which both the aorta and pulmonary artery originate, either entirely or predominantly, from the morphologic right ventricle.","definition_xrefs":["Orphanet:3426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect","termid":"MONDO:0002070"},{"relation_name":"is_a","term_name":"conotruncal heart malformations","termid":"MONDO:0016581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"double outlet right ventricle","secondary_identifiers":["DOID:6406","NANDO:2100076","NANDO:2200256","ICD10CM:Q20.1","NCIT:C98916","NANDO:1200710","SCTID:204299009","UMLS:C0013069","GARD:1908","MedDRA:10013611","icd11.foundation:141717788","MEDGEN:41649","MESH:D004310"],"synonyms":[{"name":"DORV","type":"exact"},{"name":"Dextrotransposition of aorta","type":"exact"},{"name":"double outlet right ventricle","type":"exact"}],"termid":"MONDO:0018089","xrefs":{"Monarch":{"xref_id":"0018089"}}}


id: PBO:0052657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 25","termid":"PBO:0052657"}


id: GO:1904853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an ascospore wall.","definition_xrefs":["GOC:TermGenie","PMID:24623719","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spore cell wall","termid":"GO:0099614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to ascospore wall","synonyms":[{"name":"protein localisation in ascospore wall","type":"exact"},{"name":"protein localisation to ascospore wall","type":"exact"},{"name":"protein localization in ascospore wall","type":"exact"}],"termid":"GO:1904853"}


id: MONDO:0021896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"spinal cord ischemia","termid":"MONDO:0020688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior spinal artery stroke","secondary_identifiers":["UMLS:C2931608","MEDGEN:419851","MESH:C537776"],"termid":"MONDO:0021896","xrefs":{"Monarch":{"xref_id":"0021896"}}}


id: PBO:0049125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member B","termid":"PBO:0049125"}


id: GO:0009346
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Citrate lyase is a multienzyme complex with three constituents: the alpha subunit, citrate-ACP transferase; the beta subunit, citryl-ACP lyase; and the gamma subunit, an acyl-carrier protein which also carries the prosthetic group components. All three subunits are required for citrate lyase enzyme activity. This enzyme has only been found in bacteria.","definition_xrefs":["PMID:32302313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ATP-independent citrate lyase complex","secondary_identifiers":["MetaCyc:ACECITLY-CPLX"],"synonyms":[{"name":"citrate lyase complex","type":"broad"},{"name":"citrate synthase complex","type":"broad"}],"termid":"GO:0009346"}


id: GO:1902633
data:
  {"annotated_genes":["SJAG_00053","SJAG_03170","SJAG_01863","SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[90174,104133],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[117276],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GO_REF:0000068","GOC:di","GOC:TermGenie","PMID:22562153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01863":null,"SJAG_02613":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:1902633","terms_by_termid":{"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: PR:Q9USV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mep33 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USV4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export protein 33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.02","synonyms":[{"name":"Spom972h-mep33","type":"exact"}],"termid":"PR:Q9USV4"}


id: FYPO:0006919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to nucleus during mitotic interphase","synonyms":[{"name":"normal protein localisation to nucleus during mitotic interphase","type":"exact"},{"name":"normal protein localization to nucleus during interphase of mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006919"}


id: MONDO:0100310
data:
  {"annotated_genes":["SJAG_04641","SJAG_00645","SJAG_01945","SJAG_00863","SJAG_00421","SJAG_00059","SJAG_04533","SJAG_03923","SJAG_04822","SJAG_01286","SJAG_03862","SJAG_04233","SJAG_00686","SJAG_02377","SJAG_05332","SJAG_03393","SJAG_02457","SJAG_05212","SJAG_02084","SJAG_02196","SJAG_01400","SJAG_03692","SJAG_00380","SJAG_02680","SJAG_01179","SJAG_04418","SJAG_00087","SJAG_02119","SJAG_02885","SJAG_00526","SJAG_00933","SJAG_02242","SJAG_01356","SJAG_04622","SJAG_01168","SJAG_03720","SJAG_01317","SJAG_01438"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[85202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[85177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[85679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[86567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[86080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[86800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013392"},{"annotations":[86480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[84938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[85051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014601"},{"annotations":[86228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[84793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"},{"annotations":[85942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[86556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[85317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100340"},{"annotations":[86875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958231"},{"annotations":[85768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[85455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[85019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[85533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[87036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[84971,84972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[84957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[85418,85417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[85613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[86063,86062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[86926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"},{"annotations":[85196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033115"},{"annotations":[85267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032923"},{"annotations":[86336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030312"},{"annotations":[86098,86099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030318"},{"annotations":[86105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030323"},{"annotations":[85375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[86386,86387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"},{"annotations":[85390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[85521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"Cerebellar 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ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:78726","UMLS:C0270749"],"synonyms":[{"name":"cerebellar hereditary ataxia","type":"exact"},{"name":"hereditary cerebellar 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id: GO:0097009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the balance between food intake (energy input) and energy expenditure.","definition_xrefs":["PMID:15919751","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"energy homeostasis","secondary_identifiers":["GO:2000505","GO:2000507","GO:2000506"],"synonyms":[{"name":"negative regulation of energy homeostasis","type":"related"},{"name":"positive regulation of energy homeostasis","type":"related"},{"name":"regulation of energy homeostasis","type":"related"}],"termid":"GO:0097009"}


id: MONDO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease affecting a single peripheral nerve of the upper limb.","direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuritis simplex","termid":"MONDO:0002121"},{"relation_name":"is_a","term_name":"neuritis of upper limb","termid":"MONDO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"upper limb mononeuronitis","secondary_identifiers":["DOID:1844","ICD9:354.9"],"synonyms":[{"name":"forelimb mononeuritis simplex","type":"exact"},{"name":"mononeuritis of upper limb","type":"exact"},{"name":"mononeuritis of upper limb, unspecified","type":"exact"},{"name":"mononeuritis simplex of forelimb","type":"exact"},{"name":"mononeuritis upper limb","type":"exact"}],"termid":"MONDO:0002130","xrefs":{"Monarch":{"xref_id":"0002130"}}}


id: GO:0110069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The separation of a syncytial embryo into individual cells.","definition_xrefs":["GOC:ha","PMID:27226317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"},{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"syncytial embryo cellularization","termid":"GO:0110069"}


id: GO:0018836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alkylmercury + H+ = an alkane + Hg2+.","definition_xrefs":["RHEA:18777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alkylmercury lyase activity","secondary_identifiers":["EC:4.99.1.2","MetaCyc:ALKYLMERCURY-LYASE-RXN"],"synonyms":[{"name":"alkylmercury mercuric-lyase (alkane-forming)","type":"related"},{"name":"alkylmercury mercuric-lyase activity","type":"related"},{"name":"organomercurial lyase activity","type":"related"},{"name":"organomercury lyase activity","type":"related"}],"termid":"GO:0018836"}


id: PBO:0041320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 72","termid":"PBO:0041320"}


id: PBO:0068209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 516","termid":"PBO:0068209"}


id: PBO:0066298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 3 member A, pseudogene","termid":"PBO:0066298"}


id: FYPO:0006978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular coenzyme Q10 level","synonyms":[{"name":"decreased cellular UQ10 level","type":"exact"},{"name":"decreased cellular coenzyme Q10 level during mitotic cell cycle","type":"related"},{"name":"decreased cellular coenzyme Q10 level during vegetative growth","type":"exact"},{"name":"decreased cellular ubiquinone 10 level","type":"exact"},{"name":"reduced cellular coenzyme Q10 level","type":"exact"}],"termid":"FYPO:0006978"}


id: PBO:0030536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing","termid":"PBO:0030536"}


id: GO:0071076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of uridylyl residues at the 3' end of an RNA molecule.","definition_xrefs":["PMID:19430462","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA 3' uridylation (obsolete GO:0071076)","termid":"GO:0071076"}


id: PBO:0053138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A","termid":"PBO:0053138"}


id: GO:1905443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GO_REF:0000058","PMID:15533940","GOC:PARL","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of clathrin coat assembly","synonyms":[{"name":"regulation of clathrin cage assembly","type":"exact"}],"termid":"GO:1905443"}


id: MONDO:0007075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital alacrima","termid":"MONDO:0019627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"alacrima, congenital, autosomal dominant","secondary_identifiers":["MEDGEN:934803","GARD:18165","OMIM:103420","UMLS:C4310836","MESH:C566307"],"synonyms":[{"name":"alacrimia congenita","type":"related"},{"name":"alacrimia congenita, autosomal dominant","type":"related"},{"name":"alacrima, congenital","type":"related"}],"termid":"MONDO:0007075","xrefs":{"Monarch":{"xref_id":"0007075"}}}


id: MONDO:0034204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital sodium diarrhea","termid":"MONDO:0015170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"syndromic congenital sodium diarrhea","secondary_identifiers":["GARD:22262","Orphanet:563708","UMLS:C5680120","MEDGEN:1805017"],"termid":"MONDO:0034204","xrefs":{"Monarch":{"xref_id":"0034204"}}}


id: GO:0016647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","secondary_identifiers":["EC:1.5.3.-"],"termid":"GO:0016647"}


id: GO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The larger of the two subunits of a plastid ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar large ribosomal subunit","termid":"GO:0000315"},{"relation_name":"part_of","term_name":"plastid ribosome","termid":"GO:0009547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"plastid large ribosomal subunit","termid":"GO:0000311"}


id: PBO:0000219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndr kinase/myotonic dystrophy kinase/cot1/warts family","termid":"PBO:0000219"}


id: MONDO:0024271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic helminthiasis infectious disease that involves the intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal helminthiasis","secondary_identifiers":["MESH:C531698","SCTID:26249004","UMLS:C0348287","MEDGEN:87591"],"synonyms":[{"name":"intestine parasitic helminthiasis infectious disease","type":"exact"}],"termid":"MONDO:0024271","xrefs":{"Monarch":{"xref_id":"0024271"}}}


id: GO:0042029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of 14-Ala-Leu-15 in insulin B chain and cleavage of 413-Lys-Leu-414 in alpha chain of fibrinogen.","definition_xrefs":["PMID:7725320"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrolase activity (obsolete GO:0042029)","synonyms":[{"name":"Agkistrodon contortrix contortrix metalloproteinase activity","type":"narrow"},{"name":"Agkistrodon contortrix contortrix venom metalloproteinase activity","type":"narrow"},{"name":"fibrinolytic proteinase activity","type":"related"},{"name":"fibrolase activity","type":"exact"}],"termid":"GO:0042029"}


id: MONDO:0009671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-myopathy-short stature-endocrine defect syndrome is a rare congenital myopathy syndrome characterized by nonprogressive myopathy (manifesting with mild facial and generalized weakness, bilateral ptosis, and severe lumbar lordosis), severe intellectual disability, short stature, and sexual infantilism (due to hypogonadotropic hypogonadism). The presence of a small pituitary fossa was also noted. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:3068"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"intellectual disability-myopathy-short stature-endocrine defect syndrome","secondary_identifiers":["SCTID:764959000","GARD:1358","MEDGEN:381471","OMIM:253320","MESH:C535458","UMLS:C1854663"],"synonyms":[{"name":"Chudley Rozdilsky syndrome","type":"related"},{"name":"Chudley syndrome","type":"related"},{"name":"Chudley-Rozdilsky syndrome","type":"exact"},{"name":"multicore myopathy with intellectual disability, short stature, and hypogonadotropic hypogonadism","type":"related"},{"name":"multicore myopathy with mental retardation, short stature, and hypogonadotropic hypogonadism","type":"related"}],"termid":"MONDO:0009671","xrefs":{"Monarch":{"xref_id":"0009671"}}}


id: SO:0001498
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence from the end of a YAC clone that may provide a highly specific marker.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"},{"relation_name":"part_of","term_name":"YAC","termid":"SO:0000152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAC_end","synonyms":[{"name":"YAC end","type":"exact"}],"termid":"SO:0001498"}


id: PBO:0064200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta associated 8","termid":"PBO:0064200"}


id: PBO:0111935
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family","termid":"PBO:0111935"}


id: PBO:0091558
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TetratricoPeptide Repeat","termid":"PBO:0091558"}


id: PBO:0067288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 371, pseudogene","termid":"PBO:0067288"}


id: GO:0043030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of macrophage activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"macrophage activation","termid":"GO:0042116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage activation","synonyms":[{"name":"regulation of macrophage polarization","type":"exact"}],"termid":"GO:0043030"}


id: PBO:0080773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XKR4 antisense RNA 1","termid":"PBO:0080773"}


id: PBO:0002729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-HIT","termid":"PBO:0002729"}


id: PBO:0058523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6068","termid":"PBO:0058523"}


id: GO:0070983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of a dendrite is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:15046878","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection guidance","termid":"GO:0097485"},{"relation_name":"part_of","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite guidance","synonyms":[{"name":"dendritic guidance","type":"exact"}],"termid":"GO:0070983"}


id: PBO:0003278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP-type peptidyl-prolyl cis-trans isomerase Fkh1","termid":"PBO:0003278"}


id: GO:0018657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: toluene + 1/2 O2 = 3-hydroxytoluene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene 3-monooxygenase activity (obsolete GO:0018657)","termid":"GO:0018657"}


id: GO:0003321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased by the chemicals epinephrine and norepinephrine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"},{"relation_name":"is_a","term_name":"positive regulation of blood pressure","termid":"GO:0045777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure by epinephrine-norepinephrine","termid":"GO:0003321"}


id: FYPO:0002186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a lower volume than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, small cells (obsolete FYPO:0002186)","synonyms":[{"name":"inviable microcolony, small vegetative cells","type":"exact"}],"termid":"FYPO:0002186"}


id: GO:0072365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a cellular ketone metabolic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0072365)","synonyms":[{"name":"regulation of cellular ketone metabolic process by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"},{"name":"regulation of cellular ketone metabolism by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072365"}


id: PBO:0003223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27 (predicted)","termid":"PBO:0003223"}


id: PBO:0090273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX dehydratase Nnr2","termid":"PBO:0090273"}


id: PBO:0082421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional triacylglycerol lipase and LPA acyltransferase; lipid particle-localized triacylglycerol (TAG) lipase involved in triacylglycerol mobilization; catalyzes acylation of lysophosphatidic acid (LPA); potential Cdc28p substrate; TGL5 has a paralog, TGL4, that arose from the whole genome duplication","termid":"PBO:0082421"}


id: PBO:0084249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in the de novo synthesis of GTP; member of a four-gene family in S. cerevisiae, constitutively expressed; IMD3 has a paralog, IMD4, that arose from the whole genome duplication","termid":"PBO:0084249"}


id: SO:0000014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters required for the correct positioning of the polymerase for the start of transcription. Overlaps the TSS. The mammalian consensus sequence is YYAN(T|A)YY; the Drosophila consensus sequence is TCA(G|T)t(T|C). In each the A is at position +1 with respect to the TSS. Functionally similar to the TATA box element.","definition_xrefs":["PMID:16858867","PMID:12651739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INR_motif","synonyms":[{"name":"DMp2","type":"related"},{"name":"INR motif","type":"exact"},{"name":"initiator","type":"exact"},{"name":"initiator motif","type":"exact"}],"termid":"SO:0000014"}


id: GO:0004278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Asp-Xaa > Asn-Xaa > Met-Xaa, Ser-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete granzyme B activity (obsolete GO:0004278)","synonyms":[{"name":"CCP1 proteinase","type":"narrow"},{"name":"CCPII","type":"related"},{"name":"CTLA1","type":"related"},{"name":"cytotoxic cell proteinase-1","type":"related"},{"name":"cytotoxic t-lymphocyte proteinase 2 activity","type":"narrow"},{"name":"granzyme B activity","type":"exact"},{"name":"granzyme G","type":"related"},{"name":"granzyme H","type":"related"}],"termid":"GO:0004278"}


id: GO:0018340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-serine to peptidyl-O-(sn-1-glycerophosphoryl)-L-serine.","definition_xrefs":["RESID:AA0264"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-O-(sn-1-glycerophosphoryl)-L-serine biosynthetic process from peptidyl-serine (obsolete GO:0018340)","synonyms":[{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine anabolism from peptidyl-serine","type":"exact"},{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine formation from peptidyl-serine","type":"exact"},{"name":"peptidyl-O-(sn-1-glycerophosphoryl)-L-serine synthesis from peptidyl-serine","type":"exact"}],"termid":"GO:0018340"}


id: PBO:0064123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKD2L2 divergent transcript","termid":"PBO:0064123"}


