# terms

id: GO:1901032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to reactive oxygen species.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"is_a","term_name":"negative regulation of response to oxidative stress","termid":"GO:1902883"},{"relation_name":"negatively_regulates","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to reactive oxygen species","synonyms":[{"name":"down regulation of response to AOS","type":"exact"},{"name":"down regulation of response to ROI","type":"exact"},{"name":"down regulation of response to ROS","type":"exact"},{"name":"down regulation of response to active oxygen species","type":"exact"},{"name":"down regulation of response to reactive oxidative species","type":"exact"},{"name":"down regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down regulation of response to reactive oxygen species","type":"exact"},{"name":"down-regulation of response to AOS","type":"exact"},{"name":"down-regulation of response to ROI","type":"exact"},{"name":"down-regulation of response to ROS","type":"exact"},{"name":"down-regulation of response to active oxygen species","type":"exact"},{"name":"down-regulation of response to reactive oxidative species","type":"exact"},{"name":"down-regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down-regulation of response to reactive oxygen species","type":"exact"},{"name":"downregulation of response to AOS","type":"exact"},{"name":"downregulation of response to ROI","type":"exact"},{"name":"downregulation of response to ROS","type":"exact"},{"name":"downregulation of response to active oxygen species","type":"exact"},{"name":"downregulation of response to reactive oxidative species","type":"exact"},{"name":"downregulation of response to reactive oxygen intermediate","type":"exact"},{"name":"downregulation of response to reactive oxygen species","type":"exact"},{"name":"inhibition of response to AOS","type":"exact"},{"name":"inhibition of response to ROI","type":"exact"},{"name":"inhibition of response to ROS","type":"exact"},{"name":"inhibition of response to active oxygen species","type":"exact"},{"name":"inhibition of response to reactive oxidative species","type":"exact"},{"name":"inhibition of response to reactive oxygen intermediate","type":"exact"},{"name":"inhibition of response to reactive oxygen species","type":"narrow"},{"name":"negative regulation of response to AOS","type":"exact"},{"name":"negative regulation of response to ROI","type":"exact"},{"name":"negative regulation of response to ROS","type":"exact"},{"name":"negative regulation of response to active oxygen species","type":"exact"},{"name":"negative regulation of response to reactive oxidative species","type":"exact"},{"name":"negative regulation of response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:1901032"}


id: PBO:0042281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1a molecule","termid":"PBO:0042281"}


id: PBO:0041939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 7","termid":"PBO:0041939"}


id: PBO:0052042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kidney associated DCDC2 antisense RNA 1","termid":"PBO:0052042"}


id: PBO:0034752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex ubiquitin-like protein ligase subunit Cti6","termid":"PBO:0034752"}


id: PBO:0078020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 10","termid":"PBO:0078020"}


id: MONDO:0033664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive multisystem disorder characterized by neurologic, gastrointestinal, and secretory dysfunction. Affected individuals present at birth with hypotonia, feeding difficulties, mild dysmorphic features, and sensorineural hearing loss. They show poor overall growth associated with gastrointestinal anomalies such as gastroesophageal reflux or midgut malrotation, as well as profound global developmental delay with inability to sit or speak. Tear, sweat, and saliva production is also impaired, causing dry mouth and recurrent bronchial mucus plugging. Some of the clinical features are reminiscent of cystic fibrosis.","definition_xrefs":["PMID:30740830","OMIM:619080","PMID:32754646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kilquist syndrome","secondary_identifiers":["UMLS:C5436756","MEDGEN:1742639"],"synonyms":[{"name":"KILQS","type":"exact"}],"termid":"MONDO:0033664","xrefs":{"Monarch":{"xref_id":"0033664"}}}


id: PR:O59767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle assembly checkpoint component MAD3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:11909965","PRO:KER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle assembly checkpoint component MAD3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.01c","secondary_identifiers":["UniProtKB:O59767","PR:000035573"],"synonyms":[{"name":"SPCC1795.01C","type":"related"},{"name":"SPCC895.02","type":"related"},{"name":"Spom972h-MAD3","type":"exact"},{"name":"mitotic spindle checkpoint component mad3","type":"exact"}],"termid":"PR:O59767"}


id: PBO:0090030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat protein Cft1","termid":"PBO:0090030"}


id: PBO:0047679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLNB antisense RNA 1","termid":"PBO:0047679"}


id: PBO:0062808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 8","termid":"PBO:0062808"}


id: PBO:0055416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2846","termid":"PBO:0055416"}


id: GO:0102244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-aminopropanal + H2O + NAD+ = beta-alanine + 2 H+ + NADH.","definition_xrefs":["RHEA:30695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-aminopropanal dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-12332"],"termid":"GO:0102244"}


id: GO:0106381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces a purine deoxyribonucleotide from derivatives of it, without de novo synthesis.","definition_xrefs":["PMID:6605343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine nucleotide salvage","termid":"GO:0032261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleotide salvage","termid":"GO:0106381"}


id: PBO:0110562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane myo-inositol transmembrane transporter","termid":"PBO:0110562"}


id: MONDO:0017107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated cerebellar vermis agenesis","secondary_identifiers":["Orphanet:269203","MEDGEN:1814464","GARD:20990","UMLS:C5680776"],"termid":"MONDO:0017107","xrefs":{"Monarch":{"xref_id":"0017107"}}}


id: FYPO:0004604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at subtelomeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at subtelomere","termid":"FYPO:0000169"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased chromatin silencing at subtelomere","secondary_identifiers":["FYPO:0003880"],"synonyms":[{"name":"decreased chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at subtelomere during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at telomere","type":"related"},{"name":"reduced chromatin silencing at subtelomere","type":"exact"}],"termid":"FYPO:0004604"}


id: GO:0098554
data:
  {"annotated_genes":["SJAG_04583","SJAG_04821","SJAG_03056","SJAG_00747","SJAG_04018","SJAG_03311","SJAG_02102","SJAG_02196","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75854,93660,94836,98094,98434,102050,105599,109595,116477],"is_not":false,"summary":null,"term":"GO:0098554"}]},"cv_name":"cellular_component","definition":"The side (leaflet) of the plasma membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00747":null,"SJAG_01307":null,"SJAG_02102":null,"SJAG_02196":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_04018":null,"SJAG_04583":null,"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005789","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of endoplasmic reticulum membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098554","terms_by_termid":{"GO:0098554":null}}


id: PBO:0113236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic beta subunit of the oligosaccharyltransferase (OST) complex; the OST complex catalyzes N-linked glycosylation of newly synthesized proteins in the ER; forms a pocket with Ost2p involved in binding terminal glucose units of the donor glycan; human homolog DDOST can complement yeast growth defect during down-regulation of the yeast gene","termid":"PBO:0113236"}


id: PBO:0017768
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cruciform Cutting Endonuclease","termid":"PBO:0017768"}


id: GO:0060924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to atrial cardiac muscle cell fates and their capacity to differentiate into cardiac muscle cells of the atrium. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell fate commitment","termid":"GO:0060923"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell differentiation","termid":"GO:0055011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell fate commitment","synonyms":[{"name":"atrial cardiomyocyte cell fate commitment","type":"related"},{"name":"atrial heart muscle cell fate commitment","type":"exact"}],"termid":"GO:0060924"}


id: PBO:0091341
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWItching","termid":"PBO:0091341"}


id: MONDO:0022862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cormier Rustin Munnich syndrome","termid":"MONDO:0022862","xrefs":{"Monarch":{"xref_id":"0022862"}}}


id: PBO:0034572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_telomerase_RNA_reverse_transcriptase_activity","termid":"PBO:0034572"}


id: MONDO:0958342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental defect during embryogenesis characterized by congenital absence of the optic nerve head, optic nerve fibers, retinal ganglion cells, and retinal blood vessels in a malformed eye. It often occurs unilaterally with otherwise normal brain development. In bilateral cases it is accompanied by other central nervous system malformations.","definition_xrefs":["Orphanet:637064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated optic nerve aplasia","secondary_identifiers":["UMLS:C5816782","MEDGEN:1836872"],"termid":"MONDO:0958342","xrefs":{"Monarch":{"xref_id":"0958342"}}}


id: GO:1904039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of export of iron ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:BHF","GOC:kom","GO_REF:0000058","GOC:TermGenie","PMID:15514116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of iron ion transmembrane transport","termid":"GO:0034760"},{"relation_name":"is_a","term_name":"regulation of iron export across plasma membrane","termid":"GO:1904038"},{"relation_name":"negatively_regulates","term_name":"iron ion export across plasma membrane","termid":"GO:1903988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of iron export across plasma membrane","synonyms":[{"name":"down regulation of ferrous iron export","type":"narrow"},{"name":"down regulation of iron(2+) export","type":"narrow"},{"name":"down-regulation of ferrous iron export","type":"narrow"},{"name":"down-regulation of iron(2+) export","type":"narrow"},{"name":"downregulation of ferrous iron export","type":"narrow"},{"name":"downregulation of iron(2+) export","type":"narrow"},{"name":"inhibition of ferrous iron export","type":"narrow"},{"name":"inhibition of iron(2+) export","type":"narrow"},{"name":"negative regulation of ferrous iron export","type":"narrow"},{"name":"negative regulation of iron(2+) export","type":"narrow"}],"termid":"GO:1904039"}


id: MONDO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tympanic membrane disease that is characterized by blisters on the eardrum resulting from infection.","definition_xrefs":["DOID:13791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tympanic membrane disorder","termid":"MONDO:0003648"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myringitis bullosa hemorrhagica","secondary_identifiers":["ICD9:384.01","UMLS:C0155461","SCTID:33528003","MEDGEN:509977"],"synonyms":[{"name":"bullous myringitis","type":"exact"}],"termid":"MONDO:0001803","xrefs":{"Monarch":{"xref_id":"0001803"}}}


id: PBO:0001193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase Ats1 (predicted)","termid":"PBO:0001193"}


id: MONDO:0003985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that affects the structures of the chest wall. The majority of cases are diffuse large B-cell lymphomas.","definition_xrefs":["NCIT:C6712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"malignant neoplasm of chest wall","termid":"MONDO:0021323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"chest wall lymphoma","secondary_identifiers":["UMLS:C1332933","DOID:6758","MEDGEN:232053"],"synonyms":[{"name":"chest wall cancer","type":"broad"},{"name":"chest wall lymphoma","type":"exact"},{"name":"lymphoma of chest wall","type":"exact"},{"name":"lymphoma of the chest wall","type":"exact"},{"name":"malignant tumour of chest wall","type":"related"},{"name":"primary chest wall lymphoma","type":"exact"}],"termid":"MONDO:0003985","xrefs":{"Monarch":{"xref_id":"0003985"}}}


id: GO:0045776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is decreased.","definition_xrefs":["GOC:go_curators","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood pressure","synonyms":[{"name":"down regulation of blood pressure","type":"exact"},{"name":"down-regulation of blood pressure","type":"exact"},{"name":"downregulation of blood pressure","type":"exact"},{"name":"inhibition of blood pressure","type":"narrow"}],"termid":"GO:0045776"}


id: GO:0010295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-abscisate + H+ + NADPH + O2 = (+)-8'-hydroxyabscisate + H2O + NADP+.","definition_xrefs":["EC:1.14.14.137","RHEA:12897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(+)-abscisic acid 8'-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07202","MetaCyc:1.14.13.93-RXN"],"synonyms":[{"name":"(+)-ABA 8'-hydroxylase activity","type":"related"},{"name":"ABA 8'-Hydroxylase activity, Abscisate 8'-hydroxylase activity","type":"related"},{"name":"ABA 8'-hydroxylase activity","type":"related"},{"name":"abscisate,NADPH:oxygen oxidoreductase (8'-hydroxylating)","type":"related"},{"name":"abscisic acid 8'-hydroxylase activity","type":"exact"}],"termid":"GO:0010295"}


id: MONDO:1010839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gangliosidosis that occurs in emu.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"},{"relation_name":"is_a","term_name":"lysosomal storage disease, emu","termid":"MONDO:1010858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gangliosidosis, emu","secondary_identifiers":["OMIA:000401-8790"],"termid":"MONDO:1010839","xrefs":{"Monarch":{"xref_id":"1010839"}}}


id: GO:0140643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-mevalonate + CoA + 2 NAD+ = 3-hydroxy-3-methylglutaryl-CoA + 2 NADH.","definition_xrefs":["RHEA:14833","PMID:29224355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA reductase (NADH) activity","secondary_identifiers":["EC:1.1.1.88","KEGG_REACTION:R02081","MetaCyc:HYDROXYMETHYLGLUTARYL-COA-REDUCTASE-RXN"],"synonyms":[{"name":"3-hydroxy-3-methylglutaryl coenzyme A reductase activity","type":"broad"},{"name":"HMG-CoA reductase activity","type":"broad"},{"name":"beta-hydroxy-beta-methylglutaryl CoA-reductase activity","type":"broad"},{"name":"beta-hydroxy-beta-methylglutaryl coenzyme A reductase activity","type":"broad"},{"name":"hydroxymethylglutaryl coenzyme A reductase activity","type":"broad"}],"termid":"GO:0140643"}


id: GO:0050691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism.","definition_xrefs":["GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response to virus","termid":"GO:0050688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to virus by host","synonyms":[{"name":"host regulation of antiviral response","type":"exact"},{"name":"regulation by host of antiviral response","type":"exact"},{"name":"regulation of antiviral response by host","type":"related"}],"termid":"GO:0050691"}


id: PBO:0059387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S23","termid":"PBO:0059387"}


id: GO:1900832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-leucine.","definition_xrefs":["PMID:10918062","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-leucine metabolic process","termid":"GO:1900831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"D-leucine catabolic process","synonyms":[{"name":"D-leucine breakdown","type":"exact"},{"name":"D-leucine catabolism","type":"exact"},{"name":"D-leucine degradation","type":"exact"}],"termid":"GO:1900832"}


id: GO:0050139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinate + UDP-D-glucose = N-(beta-D-glucosyl)nicotinate + UDP.","definition_xrefs":["EC:2.4.1.196","RHEA:19437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"nicotinate-N-glucosyltransferase activity","secondary_identifiers":["MetaCyc:NICOTINATE-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R01722"],"synonyms":[{"name":"UDP-glucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:nicotinic acid-N-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"nicotinate glucosyltransferase activity","type":"broad"},{"name":"uridine diphosphoglucose-nicotinate N-glucosyltransferase activity","type":"related"}],"termid":"GO:0050139"}


id: MOD:01893
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-malonyl-L-lysine.","definition_xrefs":["PubMed:21908771","RESID:AA0568","PubMed:8349414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-malonyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(carboxyacetyl)amino]hexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(carboxyacetyl)azanyl]hexanoic acid","type":"exact"},{"name":"MOD_RES N6-malonyllysine","type":"exact"},{"name":"N(epsilon)-(malonyl)lysine","type":"exact"},{"name":"N6-(carboxyacetyl)lysine","type":"exact"},{"name":"N6-malonyl-L-lysine","type":"exact"},{"name":"N6-malonyllysine","type":"exact"},{"name":"malonyllysine","type":"exact"}],"termid":"MOD:01893"}


id: GO:0098046
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that permits the translocation of proteins across the outer membrane via a transmembrane pore, formed by a beta-barrel, into the extracellular milieu or directly into host cells; the secreted proteins contain all the information required for translocation of an effector molecule through the cell envelope. The type V secretion systems includes the autotransporters (type Va), the two-partner secretion system (type Vb) and the Oca family (type Vc).","definition_xrefs":["GOC:bhm","GOC:bf","PMID:15590781","PMID:15119822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"type V protein secretion system complex","synonyms":[{"name":"T5SS complex","type":"exact"},{"name":"autotransporter system complex","type":"narrow"}],"termid":"GO:0098046"}


id: PBO:0075061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-24","termid":"PBO:0075061"}


id: MONDO:0006580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small (one mm or less) vesicular, papular or pustular monomorphous rash, which is associated with heat, fever or occlusion of sweat glands.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sweat gland disorder","termid":"MONDO:0006615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria","secondary_identifiers":["MEDGEN:44443","icd11.foundation:204420062","DOID:1382","NCIT:C34820","Wikipedia:Miliaria","SCTID:63951004","UMLS:C0026113","MESH:D008883"],"synonyms":[{"name":"heat rash","type":"exact"},{"name":"prickly heat","type":"exact"}],"termid":"MONDO:0006580","xrefs":{"Monarch":{"xref_id":"0006580"}}}


id: MONDO:0018995
data:
  {"annotated_genes":["SJAG_04334","SJAG_02289","SJAG_04495","SJAG_03248","SJAG_03046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011066"},{"annotations":[86833,86834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[86539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012640"},{"annotations":[85713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014733"}]},"cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 4 (CMT4) belongs to the genetically heterogeneous group of CMT peripheral sensorimotor polyneuropathy diseases.","definition_xrefs":["Orphanet:64749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02289":null,"SJAG_03046":null,"SJAG_03248":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:715795005","DOID:0050541","MEDGEN:905419","UMLS:C4082197","GARD:12440"],"synonyms":[{"name":"AR-CMT1","type":"exact"},{"name":"CMT4","type":"exact"},{"name":"autosomal recessive demyelinating Charcot-Marie-Tooth","type":"exact"}],"termid":"MONDO:0018995","terms_by_termid":{"MONDO:0011066":null,"MONDO:0011534":null,"MONDO:0012640":null,"MONDO:0014733":null},"xrefs":{"Monarch":{"xref_id":"0018995"}}}


id: PBO:0004653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med10","termid":"PBO:0004653"}


id: PBO:0117137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACR1 antisense RNA 1","termid":"PBO:0117137"}


id: PBO:0047733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 pseudogene 2","termid":"PBO:0047733"}


id: FYPO:0005544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abnormal.","definition_xrefs":["PomBase:mah","PMID:27082518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","synonyms":[{"name":"abnormal protein localisation to plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein localization in plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell division site plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to plasma membrane at cell division site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to plasma membrane division site during vegetative growth","type":"exact"}],"termid":"FYPO:0005544"}


id: PBO:0026756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hexavalent_chromium","termid":"PBO:0026756"}


id: PBO:0080468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1A","termid":"PBO:0080468"}


id: PBO:0055089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2507","termid":"PBO:0055089"}


id: MONDO:0859369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"joint contractures, osteochondromas, and B-cell lymphoma","secondary_identifiers":["OMIM:620232","UMLS:C5774305","MEDGEN:1824078"],"termid":"MONDO:0859369","xrefs":{"Monarch":{"xref_id":"0859369"}}}


id: GO:1900112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 trimethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 trimethylation (obsolete GO:1900112)","termid":"GO:1900112"}


id: PBO:0004012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoketolase family protein (predicted)","termid":"PBO:0004012"}


id: PBO:0056061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 1","termid":"PBO:0056061"}


id: FYPO:0000866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000866"}


id: FYPO:0004092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the horsetail-astral microtubule array is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cortical microtubule cytoskeleton","termid":"FYPO:0004266"},{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during meiosis","termid":"FYPO:0006130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to horsetail-astral microtubule array","synonyms":[{"name":"abolished protein localisation to horsetail-astral microtubule array","type":"exact"},{"name":"protein localization to horsetail-astral microtubule array abolished","type":"exact"}],"termid":"FYPO:0004092"}


id: PBO:0091055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue light signalling transcription factor, zf-GATA type Wcs2","termid":"PBO:0091055"}


id: GO:0061358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a Wnt protein from a cell.","definition_xrefs":["PMID:19223472","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of Wnt protein secretion","termid":"GO:0061356"},{"relation_name":"negatively_regulates","term_name":"Wnt protein secretion","termid":"GO:0061355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Wnt protein secretion","termid":"GO:0061358"}


id: GO:0098580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Chromatin that is part of an active sex chromosome.","definition_xrefs":["PMID:23816838","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin of active sex chromosome (obsolete GO:0098580)","termid":"GO:0098580"}


id: FYPO:0005108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA strand elongation involved in mitotic nuclear DNA replication is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:1902319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of mitotic DNA replication elongation","synonyms":[{"name":"normal rate of DNA replication elongation during mitotic cell cycle","type":"exact"},{"name":"normal rate of DNA strand elongation involved in mitotic DNA replication","type":"exact"},{"name":"normal rate of DNA strand elongation involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"normal rate of mitotic DNA replication elongation during vegetative growth","type":"exact"}],"termid":"FYPO:0005108"}


id: PBO:0109027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTTG1 pseudogene 2","termid":"PBO:0109027"}


id: GO:0061729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-D-mannose from D-fructose-6-phosphate.","definition_xrefs":["GOC:dph","PMID:16339137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-mannose biosynthetic process","termid":"GO:0009298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP-D-mannose biosynthetic process from fructose-6-phosphate","secondary_identifiers":["MetaCyc:PWY-5659"],"synonyms":[{"name":"GDP-mannose biosynthetic process from fructose-6-phosphate","type":"related"},{"name":"GDP-mannose biosynthetic process from glucose","type":"related"}],"termid":"GO:0061729"}


id: MONDO:0017143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Genetic infertility.","gene_count":0,"genotype_count":0,"name":"obsolete genetic infertility (obsolete MONDO:0017143)","secondary_identifiers":["Orphanet:275742"],"synonyms":[{"name":"genetic infertility","type":"exact"},{"name":"hereditary infertility disorder","type":"exact"}],"termid":"MONDO:0017143","xrefs":{"Monarch":{"xref_id":"0017143"}}}


id: PBO:0026638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_interphase","termid":"PBO:0026638"}


id: PBO:0044588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide branched chain transacylase E2","termid":"PBO:0044588"}


id: MONDO:0004655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute megakaryoblastic leukemia (obsolete MONDO:0004655)","termid":"MONDO:0004655","xrefs":{"Monarch":{"xref_id":"0004655"}}}


id: GO:0106325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->6)]-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylgalactosaminyl-O-glycosyl-seryl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (obsolete GO:0106325)","termid":"GO:0106325"}


id: MONDO:0029142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 111","secondary_identifiers":["GARD:22659","OMIM:618145","MEDGEN:1648423","UMLS:C4748374","DOID:0111640"],"synonyms":[{"name":"DFNB111","type":"narrow"},{"name":"deafness, autosomal recessive 111","type":"narrow"}],"termid":"MONDO:0029142","xrefs":{"Monarch":{"xref_id":"0029142"}}}


id: GO:0030035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a microspike, a dynamic, actin-rich projection extending from the surface of a migrating animal cell.","definition_xrefs":["ISBN:0815316194","PMID:12153987","PMID:11429692","PMID:19095735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"microspike assembly","synonyms":[{"name":"microspike biogenesis","type":"related"},{"name":"microspike biosynthesis","type":"exact"},{"name":"microspike formation","type":"exact"}],"termid":"GO:0030035"}


id: FYPO:0005974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in the mitochondria is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"},{"relation_name":"is_a","term_name":"normal level of substance in mitochondrion","termid":"FYPO:0004959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial protein level","synonyms":[{"name":"normal mitochondrial protein accumulation","type":"related"},{"name":"normal mitochondrial protein level during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0005974"}


id: PBO:0065857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB14, member RAS oncogene family","termid":"PBO:0065857"}


id: GO:0021988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the olfactory lobe over time from its initial formation until its mature state. The olfactory lobe is the area of the brain that process the neural inputs for the sense of smell.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory lobe development","termid":"GO:0021988"}


id: PBO:0001826
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.1.3.1","termid":"PBO:0001826"}


id: PATO:0000515
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A resistance quality inhering in a bearer by virtue of its disposition to endure or being insensitive to a stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to","termid":"PATO:0001046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolerant to","synonyms":[{"name":"tolerant","type":"exact"}],"termid":"PATO:0000515"}


id: GO:0097686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A horn-shaped dinoflagellate apex found in thecate species.","definition_xrefs":["GOC:at","PMID:7002229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate apex","termid":"GO:0097683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate apical horn","termid":"GO:0097686"}


id: GO:0009235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0006766","GO:0033013","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cobalamin metabolic process","secondary_identifiers":["Reactome:R-HSA-9759218"],"synonyms":[{"name":"cobalamin metabolism","type":"exact"},{"name":"vitamin B12 metabolic process","type":"exact"},{"name":"vitamin B12 metabolism","type":"exact"},{"name":"vitamin B12 reduction","type":"narrow"}],"termid":"GO:0009235"}


id: GO:0004326
data:
  {"annotated_genes":["SJAG_03224","SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72115,79022],"is_not":false,"summary":null,"term":"GO:0004326"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1).","definition_xrefs":["EC:6.3.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_03224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"tetrahydrofolylpolyglutamate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:FOLYLPOLYGLUTAMATESYNTH-RXN","RHEA:10580","Reactome:R-HSA-197958","Reactome:R-HSA-200681","Reactome:R-HSA-200682"],"synonyms":[{"name":"FPGS activity","type":"related"},{"name":"N(10)-formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"N10-formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"folate polyglutamate synthetase activity","type":"related"},{"name":"folylpoly(gamma-glutamate) synthase activity","type":"related"},{"name":"folylpoly-gamma-glutamate synthase activity","type":"related"},{"name":"folylpoly-gamma-glutamate synthetase-dihydrofolate synthetase activity","type":"related"},{"name":"folylpolyglutamate synthase activity","type":"exact"},{"name":"folylpolyglutamate synthetase activity","type":"related"},{"name":"folylpolyglutamyl synthetase activity","type":"related"},{"name":"formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"tetrahydrofolate synthase activity","type":"related"},{"name":"tetrahydrofolate:L-glutamate gamma-ligase (ADP-forming) activity","type":"related"},{"name":"tetrahydrofolyl-[gamma-Glu]n:L-glutamate gamma-ligase (ADP-forming)","type":"related"},{"name":"tetrahydropteroyl-[gamma-polyglutamate]:L-glutamate gamma-ligase (ADP-forming)","type":"related"}],"termid":"GO:0004326","terms_by_termid":{"GO:0004326":null}}


id: PBO:0082836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis; localizes to both nucleolus and cytoplasm","termid":"PBO:0082836"}


id: PATO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000887 relative litter size value (obsolete PATO:0000887)","termid":"PATO:0000887"}


id: GO:0102640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: paspalicine + O2 + NADPH + H+ = paspalinine + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete paspalinine synthase activity (obsolete GO:0102640)","termid":"GO:0102640"}


id: GO:0045183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A translation regulator activity that does not involve binding to nucleic acids.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation factor activity","termid":"GO:0180051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"translation factor activity, non-nucleic acid binding","termid":"GO:0045183"}


id: GO:1902868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["PMID:16872597","GO_REF:0000058","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of retina development in camera-type eye","termid":"GO:1902866"},{"relation_name":"positively_regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retina development in camera-type eye","synonyms":[{"name":"activation of retina development in camera-style eye","type":"narrow"},{"name":"activation of retina development in camera-type eye","type":"narrow"},{"name":"activation of retinal development","type":"related"},{"name":"positive regulation of retina development in camera-style eye","type":"exact"},{"name":"positive regulation of retinal development","type":"related"},{"name":"up regulation of retina development in camera-style eye","type":"exact"},{"name":"up regulation of retina development in camera-type eye","type":"exact"},{"name":"up regulation of retinal development","type":"related"},{"name":"up-regulation of retina development in camera-style eye","type":"exact"},{"name":"up-regulation of retina development in camera-type eye","type":"exact"},{"name":"up-regulation of retinal development","type":"related"},{"name":"upregulation of retina development in camera-style eye","type":"exact"},{"name":"upregulation of retina development in camera-type eye","type":"exact"},{"name":"upregulation of retinal development","type":"related"}],"termid":"GO:1902868"}


id: PBO:0110480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 7","termid":"PBO:0110480"}


id: PBO:0060566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 2, pseudogene","termid":"PBO:0060566"}


id: PATO:0000849
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000849 absolute auditory ability (obsolete PATO:0000849)","termid":"PATO:0000849"}


id: PBO:0038585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acyltransferase 2","termid":"PBO:0038585"}


id: PBO:0046575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 17","termid":"PBO:0046575"}


id: PBO:0073405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 8","termid":"PBO:0073405"}


id: GO:1900656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of diorcinol biosynthetic process","termid":"GO:1900655"},{"relation_name":"negatively_regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of diorcinol biosynthetic process","synonyms":[{"name":"down regulation of diorcinol anabolism","type":"exact"},{"name":"down regulation of diorcinol biosynthesis","type":"exact"},{"name":"down regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down regulation of diorcinol formation","type":"exact"},{"name":"down regulation of diorcinol synthesis","type":"exact"},{"name":"down-regulation of diorcinol anabolism","type":"exact"},{"name":"down-regulation of diorcinol biosynthesis","type":"exact"},{"name":"down-regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down-regulation of diorcinol formation","type":"exact"},{"name":"down-regulation of diorcinol synthesis","type":"exact"},{"name":"downregulation of diorcinol anabolism","type":"exact"},{"name":"downregulation of diorcinol biosynthesis","type":"exact"},{"name":"downregulation of diorcinol biosynthetic process","type":"exact"},{"name":"downregulation of diorcinol formation","type":"exact"},{"name":"downregulation of diorcinol synthesis","type":"exact"},{"name":"inhibition of diorcinol anabolism","type":"exact"},{"name":"inhibition of diorcinol biosynthesis","type":"exact"},{"name":"inhibition of diorcinol biosynthetic process","type":"narrow"},{"name":"inhibition of diorcinol formation","type":"exact"},{"name":"inhibition of diorcinol synthesis","type":"exact"},{"name":"negative regulation of diorcinol anabolism","type":"exact"},{"name":"negative regulation of diorcinol biosynthesis","type":"exact"},{"name":"negative regulation of diorcinol formation","type":"exact"},{"name":"negative regulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900656"}


id: PBO:0081208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 8","termid":"PBO:0081208"}


id: PBO:0058365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4737","termid":"PBO:0058365"}


id: PBO:0044789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 1B","termid":"PBO:0044789"}


id: MONDO:0016170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Chronic form of polyradiculoneuropathy.","definition_xrefs":["MONDO:patterns/chronic"],"gene_count":0,"genotype_count":0,"name":"obsolete chronic polyradiculoneuropathy (obsolete MONDO:0016170)","secondary_identifiers":["Orphanet:208978"],"synonyms":[{"name":"polyradiculoneuropathy, chronic","type":"exact"}],"termid":"MONDO:0016170","xrefs":{"Monarch":{"xref_id":"0016170"}}}


id: MONDO:1010477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arrhythmogenic right ventricular cardiomyopathy that occurs in chimpanzee.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy, non-human animal","termid":"MONDO:1010019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmogenic right ventricular cardiomyopathy, chimpanzee","secondary_identifiers":["OMIA:000878-9598"],"termid":"MONDO:1010477","xrefs":{"Monarch":{"xref_id":"1010477"}}}


id: MONDO:0043541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conjunctivitis resulting from viral infection.","definition_xrefs":["NCIT:C34509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctivitis","termid":"MONDO:0003799"},{"relation_name":"is_a","term_name":"viral eye infection","termid":"MONDO:0020950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"viral conjunctivitis","secondary_identifiers":["SCTID:45261009","EFO:0008571","icd11.foundation:157616931","MESH:D003236","UMLS:C0009774","MEDGEN:3212"],"synonyms":[{"name":"Conjunctivitides, viral","type":"related"},{"name":"Viruses caused conjunctivitis (disease)","type":"exact"},{"name":"Viruses conjunctivitis (disease)","type":"exact"},{"name":"viral Conjunctivitides","type":"related"},{"name":"viral conjunctivitis","type":"exact"}],"termid":"MONDO:0043541","xrefs":{"Monarch":{"xref_id":"0043541"}}}


id: PBO:0039138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adherens junctions associated protein 1","termid":"PBO:0039138"}


id: PBO:0087216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine transporter of the mitochondrial inner membrane; member of the mitochondrial carrier family; required for biotin biosynthesis and respiratory growth","termid":"PBO:0087216"}


id: MONDO:0008903
data:
  {"annotated_genes":["SJAG_03453","SJAG_00229","SJAG_04114","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86576,86577,87108],"is_not":false,"summary":null,"term":"MONDO:0008903"},{"annotations":[86122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the lung.","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"thoracic cancer","termid":"MONDO:0003274"},{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_04114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:162.3","OMIM:211980","DOID:1324","UMLS:C0242379","MEDGEN:66885","ICD9:162.4","ICD9:162.5","ICD9:162.8","ICD9:162.9","SCTID:363358000","NCIT:C7377"],"synonyms":[{"name":"Nonsmall cell lung cancer","type":"related"},{"name":"adenocarcinoma of lung, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation","type":"exact"},{"name":"adenocarcinoma of lung, somatic","type":"exact"},{"name":"alveolar cell carcinoma","type":"related"},{"name":"cancer of lung","type":"exact"},{"name":"lung cancer","type":"exact"},{"name":"lung cancer, protection against","type":"related"},{"name":"lung cancer, protection against, autosomal dominant, somatic mutation","type":"exact"},{"name":"lung cancer, resistance to, autosomal dominant, somatic mutation","type":"exact"},{"name":"lung cancer, somatic","type":"exact"},{"name":"lung cancer, susceptibility to, autosomal dominant, somatic mutation","type":"exact"},{"name":"lung neoplasm","type":"related"},{"name":"malignant lung neoplasm","type":"exact"},{"name":"malignant lung tumor","type":"exact"},{"name":"malignant lung tumour","type":"exact"},{"name":"malignant neoplasm of lung","type":"exact"},{"name":"malignant neoplasm of the lung","type":"exact"},{"name":"malignant tumor of lung","type":"exact"},{"name":"malignant tumor of the lung","type":"exact"},{"name":"malignant tumour of lung","type":"exact"},{"name":"malignant tumour of the lung","type":"exact"},{"name":"nonsmall cell lung cancer, response to tyrosine kinase inhibitor in, autosomal dominant, somatic mutation","type":"exact"},{"name":"nonsmall cell lung cancer, somatic","type":"exact"},{"name":"nonsmall cell lung cancer, susceptibility to, autosomal dominant, somatic mutation","type":"exact"}],"termid":"MONDO:0008903","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0008903"}}}


id: GO:0045518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-22 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-22 receptor binding","synonyms":[{"name":"IL-22","type":"narrow"},{"name":"interleukin-22 receptor ligand","type":"narrow"}],"termid":"GO:0045518"}


id: GO:0009400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.","definition_xrefs":["GOC:bf","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer, downstream of receptor, with serine/threonine phosphatase activity (obsolete GO:0009400)","synonyms":[{"name":"receptor signaling protein serine/threonine phosphatase activity","type":"exact"},{"name":"receptor signalling protein serine/threonine phosphatase activity","type":"exact"}],"termid":"GO:0009400"}


id: PR:P50514
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An argininosuccinate lyase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate lyase ArgX (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.03c","secondary_identifiers":["UniProtKB:P50514"],"synonyms":[{"name":"ASAL (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"Arginosuccinase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"SPBC1539.03c","type":"related"},{"name":"Spom972h-ASL","type":"exact"}],"termid":"PR:P50514"}


id: PATO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000933 red light sensitivity (obsolete PATO:0000933)","termid":"PATO:0000933"}


id: PBO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I subfamily","termid":"PBO:0000746"}


id: MONDO:0013000
data:
  {"annotated_genes":["SJAG_01372"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85234],"is_not":false,"summary":null,"term":"MONDO:0013000"}]},"cv_name":"mondo","definition":"An extremely rare form of acute hepatic porphyria characterized by neuro-visceral attacks without cutaneous manifestations.","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic porphyria","termid":"MONDO:0002520"},{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005093","MONDO:0005066","MONDO:0002515","MONDO:0019142"],"is_obsolete":false,"name":"porphyria due to ALA dehydratase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C562618","MEDGEN:78659","OMIM:612740","GARD:16937","Orphanet:100924","UMLS:C0268328","NORD:747","NCIT:C133887"],"synonyms":[{"name":"5-aminolevulinic acid dehydratase deficiency porphyria","type":"related"},{"name":"ALA dehydratase deficiency pophyria","type":"related"},{"name":"ALAD Porphyria","type":"exact"},{"name":"ALAD deficiency","type":"related"},{"name":"ALAD porphyria","type":"exact"},{"name":"ALAD-related porphyria","type":"exact"},{"name":"Delta-aminolevulinate dehydratase deficiency","type":"related"},{"name":"Doss porphyria","type":"related"},{"name":"Lead poisoning, susceptibility to","type":"related"},{"name":"acute hepatic porphyria","type":"exact"},{"name":"aminolevulinate dehydratase deficiency porphyria","type":"related"},{"name":"porphobilinogen synthase deficiency","type":"related"},{"name":"porphyria due to ALAD deficiency","type":"exact"},{"name":"porphyria due to delta-aminolevulinate dehydratase deficiency","type":"exact"},{"name":"porphyria of Doss","type":"exact"},{"name":"porphyria, ALAD","type":"related"},{"name":"porphyria, acute hepatic","type":"related"}],"termid":"MONDO:0013000","terms_by_termid":{"MONDO:0013000":null},"xrefs":{"Monarch":{"xref_id":"0013000"}}}


id: GO:1903155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any glutathione transmembrane transporter activity that is involved in glutathione import into cell.","definition_xrefs":["GOC:TermGenie","ISBN:0-8249-3695-6","GO_REF:0000061","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete glutathione transmembrane transporter activity involved in glutathione import into cell (obsolete GO:1903155)","synonyms":[{"name":"glutathione transmembrane transporter activity involved in glutathione import into cell","type":"exact"},{"name":"glutathione transmembrane transporter activity involved in glutathione uptake","type":"exact"}],"termid":"GO:1903155"}


id: SO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the nuclear rim.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"nuclear_rim_localization_signal","secondary_identifiers":["PMID:16027110"],"synonyms":[{"name":"nuclear rim localization signal","type":"related"}],"termid":"SO:0001534"}


id: GO:0004258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a C-terminal amino acid with a broad specificity.","definition_xrefs":["EC:3.4.16.5"],"gene_count":0,"genotype_count":0,"name":"obsolete vacuolar carboxypeptidase Y (obsolete GO:0004258)","synonyms":[{"name":"vacuolar carboxypeptidase Y","type":"exact"}],"termid":"GO:0004258"}


id: PBO:0066129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 8","termid":"PBO:0066129"}


id: GO:0048298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgA isotypes","termid":"GO:0048296"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0010467","GO:0006310"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgA isotypes","synonyms":[{"name":"activation of isotype switching to IgA isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"positive regulation of class switching to IgA isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgA isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgA isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgA isotypes","type":"exact"}],"termid":"GO:0048298"}


id: GO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of the optic cup. This process pertains to the physical shaping of the rudimentary structure.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup structural organization","synonyms":[{"name":"optic cup structural organisation","type":"exact"}],"termid":"GO:0003409"}


id: PBO:0028515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_hydrogen_peroxide_catabolism","termid":"PBO:0028515"}


id: PBO:0053672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 853","termid":"PBO:0053672"}


id: PBO:0082703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the meiotic outer plaque of the spindle pole body; involved in modifying the meiotic outer plaque that is required prior to prospore membrane formation; SPO21 has a paralog, YSW1, that arose from the whole genome duplication","termid":"PBO:0082703"}


id: PBO:0017880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to plasma membrane transport protein Rsn1 (predicted)","termid":"PBO:0017880"}


id: MOD:00985
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tyrosine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated tyrosine","synonyms":[{"name":"HalTyr","type":"exact"}],"termid":"MOD:00985"}


id: PBO:0060974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYC pseudogene 1","termid":"PBO:0060974"}


id: PBO:0057677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1268a","termid":"PBO:0057677"}


id: GO:1905440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chondroitin 6'-sulfate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22365850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to chondroitin 6'-sulfate","termid":"GO:1905439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chondroitin 6'-sulfate","termid":"GO:1905440"}


id: PBO:0062067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 5 pseudogene","termid":"PBO:0062067"}


id: GO:0050108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,4R)-bornyl diphosphate + H2O = (1R,2S,4R)-borneol + diphosphate.","definition_xrefs":["PMID:42357","EC:3.1.7.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"monoterpenyl-diphosphatase activity","secondary_identifiers":["MetaCyc:MONOTERPENYL-PYROPHOSPHATASE-RXN","RHEA:81371"],"synonyms":[{"name":"bornyl diphosphate hydrolase activity","type":"related"},{"name":"bornyl pyrophosphate hydrolase activity","type":"related"},{"name":"monoterpenyl-diphosphate diphosphohydrolase activity","type":"related"},{"name":"monoterpenyl-pyrophosphatase activity","type":"exact"}],"termid":"GO:0050108"}


id: SO:1001272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron found in tRNA that is spliced via endonucleolytic cleavage and ligation rather than transesterification.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease_spliced_intron","termid":"SO:0001216"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_intron","synonyms":[{"name":"pre-tRNA intron","type":"exact"},{"name":"tRNA intron","type":"exact"}],"termid":"SO:1001272"}


id: GO:1904524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA amplification.","definition_xrefs":["PMID:26195783","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA amplification","termid":"GO:1904523"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA amplification","synonyms":[{"name":"down regulation of DNA amplification","type":"exact"},{"name":"down-regulation of DNA amplification","type":"exact"},{"name":"downregulation of DNA amplification","type":"exact"},{"name":"inhibition of DNA amplification","type":"narrow"}],"termid":"GO:1904524"}


id: PR:A6X974
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.08c","synonyms":[{"name":"Spom972h-SPAC8E11.08c","type":"exact"}],"termid":"PR:A6X974"}


id: PBO:0044497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYFIP related Rac1 interactor A","termid":"PBO:0044497"}


id: GO:0032898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a neurotrophin due to biosynthesis or secretion by cells in a neuron's target field, resulting in an increase in its intracellular or extracellular levels. A neurotrophin is any of a family of growth factors that prevent apoptosis in neurons and promote nerve growth.","definition_xrefs":["GOC:mtg_MIT_16mar07","GOC:ecd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurotrophin production","termid":"GO:0032898"}


id: MONDO:0006203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the extrahepatic bile ducts. It is composed entirely by malignant squamous epithelial cells.","definition_xrefs":["NCIT:C5777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"},{"relation_name":"is_a","term_name":"squamous cell bile duct carcinoma","termid":"MONDO:0003500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"extrahepatic bile duct squamous cell carcinoma","secondary_identifiers":["EFO:1000248"],"synonyms":[{"name":"bile duct squamous cell carcinoma","type":"broad"},{"name":"extrahepatic bile duct squamous cell carcinoma","type":"exact"},{"name":"squamous cell bile duct carcinoma","type":"broad"},{"name":"squamous cell carcinoma of bile duct","type":"broad"},{"name":"squamous cell carcinoma of the bile duct","type":"broad"}],"termid":"MONDO:0006203","xrefs":{"Monarch":{"xref_id":"0006203"}}}


id: PBO:0065159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 9","termid":"PBO:0065159"}


id: MONDO:0009333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mullerian derivatives-lymphangiectasia-polydactyly syndrome is characterized by prenatal linear growth deficiency, hypertrophied alveolar ridges, redundant nuchal skin, postaxial polydactyly and cryptorchidism. Mullerian duct remnants, lymphangiectasis, and renal anomalies are also present. Three cases have been described. A small penis was observed in two of these cases. The syndrome is likely to be an autosomal recessive or X-linked trait. All the reported patients died neonatally of hepatic failure.","definition_xrefs":["Orphanet:1655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"mullerian derivatives-lymphangiectasia-polydactyly syndrome","secondary_identifiers":["OMIM:235255","GARD:5430","MESH:C536478","UMLS:C1856159","MEDGEN:343489"],"synonyms":[{"name":"MULLERIAN derivatives, persistence of, with lymphangiectasia and postaxial polydactyly","type":"related"},{"name":"Müllerian derivatives-lymphangiectasia-polydactyly syndrome","type":"related"},{"name":"Urioste syndrome","type":"related"},{"name":"persistence of mullerian derivatives with lymphangiectasia and postaxial polydactyly","type":"related"},{"name":"renal and craniofacial anomalies with persistence of mullerian derivatives, lymphangiectasis, hepatic failure, postaxial polydactyly","type":"related"}],"termid":"MONDO:0009333","xrefs":{"Monarch":{"xref_id":"0009333"}}}


id: GO:0106357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sn-glycerol 1-phosphate = dihydroxyacetone phosphate + H+ + NADH.","definition_xrefs":["RHEA:21412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-1-phosphate dehydrogenase [NAD(P)+] activity","termid":"GO:0050492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glycerol-1-phosphate dehydrogenase (NAD+) activity","synonyms":[{"name":"glycerol-1-phosphate dehydrogenase [NAD+] activity","type":"exact"}],"termid":"GO:0106357"}


id: GO:0002790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a peptide from a cell or a tissue.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"},{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"peptide secretion","termid":"GO:0002790"}


id: MONDO:0015973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic coagulation disorder (obsolete MONDO:0015973)","termid":"MONDO:0015973","xrefs":{"Monarch":{"xref_id":"0015973"}}}


id: PBO:0117151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WARS1 antisense RNA 1","termid":"PBO:0117151"}


id: PBO:0004446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle checkpoint protein Mad2","termid":"PBO:0004446"}


id: GO:0021883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the cell cycle is halted during one of the normal phases (G1, S, G2, M) in a cell that has been committed to become a neuron that will reside in the forebrain.","definition_xrefs":["GOC:tb","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:16226447","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle arrest of committed forebrain neuronal progenitor cell (obsolete GO:0021883)","termid":"GO:0021883"}


id: PATO:0000869
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000869 prepulse inhibition value (obsolete PATO:0000869)","termid":"PATO:0000869"}


id: PBO:0090690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb1","termid":"PBO:0090690"}


id: GO:0060783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein in the mesenchymal cells of the prostate that contribute to the progression of the prostate over time. This process contributes to lung development.","definition_xrefs":["PMID:12221011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"part_of","term_name":"epithelial-mesenchymal signaling involved in prostate gland development","termid":"GO:0060738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesenchymal smoothened signaling pathway involved in prostate gland development","synonyms":[{"name":"mesenchymal hedgehog signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal hh signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal smoothened signalling pathway involved in prostate gland development","type":"exact"}],"termid":"GO:0060783"}


id: PBO:0073292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 14","termid":"PBO:0073292"}


id: MONDO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"tumoral calcinosis, hyperphosphatemic, familial, 2","secondary_identifiers":["GARD:16281","EFO:0009383","MEDGEN:1640532","UMLS:C4693863","OMIM:617993"],"synonyms":[{"name":"HFTC2","type":"related"},{"name":"tumoral calcinosis, hyperphosphatemic, familial, 2","type":"exact"}],"termid":"MONDO:0060714","xrefs":{"Monarch":{"xref_id":"0060714"}}}


id: GO:1903911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor clustering.","definition_xrefs":["PMID:23575248","GO_REF:0000058","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor clustering","synonyms":[{"name":"activation of receptor clustering","type":"narrow"},{"name":"up regulation of receptor clustering","type":"exact"},{"name":"up-regulation of receptor clustering","type":"exact"},{"name":"upregulation of receptor clustering","type":"exact"}],"termid":"GO:1903911"}


id: PBO:0014303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR domain protein, possibly involved in DNA repair and neddylation","termid":"PBO:0014303"}


id: PBO:0073730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLBP divergent transcript","termid":"PBO:0073730"}


id: FYPO:0000386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which biofilm formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biofilm formation","termid":"FYPO:0000630"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished biofilm formation","synonyms":[{"name":"absent biofilm formation","type":"exact"},{"name":"biofilm formation abolished","type":"exact"},{"name":"biofilm formation: absent","type":"related"}],"termid":"FYPO:0000386"}


id: GO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the tridecapeptide neurotensin to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state.","definition_xrefs":["PMID:10390649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotensin receptor activity","synonyms":[{"name":"G protein coupled neurotensin receptor activity","type":"exact"},{"name":"G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"neurotensin receptor activity, G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0016492"}


id: MONDO:0031376
data:
  {"annotated_genes":["SJAG_03227"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800044"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03227":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of deglycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3808991","OMIMPS:615273","MEDGEN:815321"],"termid":"MONDO:0031376","terms_by_termid":{"MONDO:0800044":null},"xrefs":{"Monarch":{"xref_id":"0031376"}}}


id: PBO:0085038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential component of the HAT-B histone acetyltransferase complex; localized to the nucleus; has a role in telomeric silencing; other members are Hat1p and Hat2p","termid":"PBO:0085038"}


id: FYPO:0002825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle","synonyms":[{"name":"decreased protein localisation to mitotic spindle","type":"exact"},{"name":"decreased protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle during mitosis","type":"exact"},{"name":"decreased protein localization to spindle during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle","type":"exact"}],"termid":"FYPO:0002825"}


id: MONDO:0015815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary cutaneous diffuse large B-cell lymphoma, leg type (obsolete MONDO:0015815)","termid":"MONDO:0015815","xrefs":{"Monarch":{"xref_id":"0015815"}}}


id: GO:0160177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate which autophagosomes fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects).","definition_xrefs":["PMID:38360932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"positively_regulates","term_name":"autophagosome-lysosome fusion","termid":"GO:0061909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of autophagosome-lysosome fusion","termid":"GO:0160177"}


id: PR:Q92349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 79 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.04","synonyms":[{"name":"Spom972h-spo7","type":"exact"}],"termid":"PR:Q92349"}


id: GO:0043269
data:
  {"annotated_genes":["SJAG_03631","SJAG_00296","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113107,90981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[101898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"monoatomic ion transport","termid":"GO:0006811"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of monoatomic ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ion transport","type":"broad"}],"termid":"GO:0043269","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:0032687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-alpha production.","definition_xrefs":["PMID:15546383","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of type I interferon production","termid":"GO:0032480"},{"relation_name":"is_a","term_name":"regulation of interferon-alpha production","termid":"GO:0032647"},{"relation_name":"negatively_regulates","term_name":"interferon-alpha production","termid":"GO:0032607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interferon-alpha production","secondary_identifiers":["GO:0045355","GO:1902740"],"synonyms":[{"name":"down regulation of interferon-alpha production","type":"exact"},{"name":"down-regulation of interferon-alpha production","type":"exact"},{"name":"downregulation of interferon-alpha production","type":"exact"},{"name":"inhibition of interferon-alpha production","type":"narrow"},{"name":"negative regulation of interferon-alpha biosynthetic process","type":"narrow"},{"name":"negative regulation of interferon-alpha secretion","type":"narrow"}],"termid":"GO:0032687"}


id: MONDO:0700281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant complex neurodevelopmental disorder in which the cause of the disease is a mutation in the MYH10 gene.","definition_xrefs":["PMID:35980381","PMID:25003005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder with or without congenital anomalies","termid":"MONDO:0100465"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0000426"],"is_obsolete":false,"name":"MYH10-related neurodevelopmental disorder with congenital anomalies","termid":"MONDO:0700281","xrefs":{"Monarch":{"xref_id":"0700281"}}}


id: GO:0046070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dGTP, guanosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dGTP metabolic process","synonyms":[{"name":"dGTP metabolism","type":"exact"}],"termid":"GO:0046070"}


id: MONDO:0014689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Klippel-Feil syndrome","termid":"MONDO:0001029"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome","secondary_identifiers":["UMLS:C4225285","GARD:17778","MEDGEN:894399","OMIM:616549","Orphanet:447974","DOID:0080592"],"synonyms":[{"name":"KFS4","type":"related"},{"name":"Klippel-Feil anomaly-myopathy-facial dysmorphism syndrome","type":"exact"},{"name":"Klippel-Feil syndrome 4, autosomal recessive, with myopathy and facial dysmorphism","type":"related"},{"name":"Klippel-Feil syndrome 4, autosomal recessive, with nemaline myopathy and facial dysmorphism","type":"related"}],"termid":"MONDO:0014689","xrefs":{"Monarch":{"xref_id":"0014689"}}}


id: PBO:0077728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18","termid":"PBO:0077728"}


id: GO:0097742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Centriole assembly in which a centriole arises de novo, rather than by replication from an existing centriole. This process may occur via different mechanisms. Examples include the deuterosome pathway in multicilated epithelial animal cells and formation of centrioles during parthenogenesis in some insects.","definition_xrefs":["PMID:25291643","GOC:cilia","PMID:25047614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centriole assembly","termid":"GO:0098534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"de novo centriole assembly","synonyms":[{"name":"acentriolar basal body biogenesis","type":"related"},{"name":"de novo basal body amplification","type":"related"},{"name":"de novo basal body assembly","type":"related"},{"name":"de novo basal body biogenesis","type":"related"},{"name":"de novo basal body generation","type":"related"},{"name":"de novo centriole amplification","type":"related"},{"name":"de novo ciliary basal body assembly","type":"related"},{"name":"multiciliation","type":"related"},{"name":"multiciliogenesis","type":"related"}],"termid":"GO:0097742"}


id: PBO:0058272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-1","termid":"PBO:0058272"}


id: MONDO:0017744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of O-xylosyl/N-acetylgalactosaminylglycan synthesis (obsolete MONDO:0017744)","secondary_identifiers":["Orphanet:309463"],"termid":"MONDO:0017744","xrefs":{"Monarch":{"xref_id":"0017744"}}}


id: PBO:0082679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-I complex; ESCRT-I is involved in ubiquitin-dependent sorting of proteins into the endosome; prevents polyubiquitination of the arrestin-related protein Rim8p, thereby directing its monoubiquitination by Rsp5p; homologous to the mouse and human Tsg101 tumor susceptibility gene; mutants exhibit a Class E Vps phenotype;","termid":"PBO:0082679"}


id: GO:0019285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"glycine betaine biosynthetic process","termid":"GO:0031456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine biosynthetic process from choline","synonyms":[{"name":"N-trimethylglycine biosynthesis from choline","type":"exact"},{"name":"N-trimethylglycine biosynthetic process from choline","type":"exact"},{"name":"choline oxidation","type":"exact"},{"name":"glycine betaine anabolism from choline","type":"exact"},{"name":"glycine betaine formation from choline","type":"exact"},{"name":"glycine betaine synthesis from choline","type":"exact"}],"termid":"GO:0019285"}


id: GO:0036396
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A RNA methyltransferase complex that catalyzes the post-transcriptional methylation of adenosine to form N6-methyladenosine (m6A). In budding yeast, the MIS complex consists of Mum2p, Ime4p and Slz1p. In vertebrates, the complex consists of METTL3, METTL14 and associated components WTAP, ZC3H13, VIRMA, CBLL1/HAKAI and in some cases of RBM15 (RBM15 or RBM15B).","definition_xrefs":["GOC:dgf","GOC:sp","PMID:24407421","PMID:29507755","PMID:29535189","PMID:29547716","PMID:24316715","PMID:22685417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA N6-methyladenosine methyltransferase complex","synonyms":[{"name":"METTL3-METTL14-WTAP methyltransferase complex","type":"related"},{"name":"MIS complex","type":"related"},{"name":"Mum2, Ime4, and Slz1 complex","type":"exact"},{"name":"WMM complex","type":"exact"},{"name":"m(6)A writer complex","type":"related"},{"name":"m6A methyltransferase complex","type":"related"}],"termid":"GO:0036396"}


id: PR:Q09712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.05","synonyms":[{"name":"GPI mannosyltransferase II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpi18","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09712"}


id: GO:0004908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-1 receptor activity","secondary_identifiers":["Wikipedia:Interleukin-1_receptor"],"synonyms":[{"name":"IL-1 receptor activity","type":"exact"},{"name":"IL-1R","type":"exact"}],"termid":"GO:0004908"}


id: PBO:0057966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3688-1","termid":"PBO:0057966"}


id: MONDO:0008897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tumoral calcinosis, hyperphosphatemic, familial, 1 (obsolete MONDO:0008897)","termid":"MONDO:0008897","xrefs":{"Monarch":{"xref_id":"0008897"}}}


id: GO:0047936
data:
  {"annotated_genes":["SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H.","definition_xrefs":["EC:1.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose dehydrogenase activity","termid":"GO:0004344"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glucose 1-dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLUCOSE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"D-glucose dehydrogenase (NAD(P))","type":"related"},{"name":"beta-D-glucose:NAD(P)+ 1-oxidoreductase activity","type":"related"},{"name":"hexose phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0047936","terms_by_termid":{"GO:0047935":null}}


id: PR:O74463
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1739.01 gene.","definition_xrefs":["UniProtKB:O74463","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1739.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.01","synonyms":[{"name":"Spom972h-SPCC1739.01","type":"exact"}],"termid":"PR:O74463"}


id: PBO:0085353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid hydroperoxide glutathione peroxidase; protects cells from phospholipid hydroperoxides and nonphospholipid peroxides during oxidative stress; induced by glucose starvation; protein abundance increases in response to DNA replication stress","termid":"PBO:0085353"}


id: PBO:0059619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 31","termid":"PBO:0059619"}


id: PATO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000368 towards1 (obsolete PATO:0000368)","termid":"PATO:0000368"}


id: FYPO:0005309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H4-K5 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4-K5 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K5 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005309"}


id: PBO:0086277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a possible role in tRNA export; shows similarity to 6-phosphogluconolactonase non-catalytic domains but does not exhibit this enzymatic activity; homologous to Sol3p and Sol4p; SOL2 has a paralog, SOL1, that arose from the whole genome duplication","termid":"PBO:0086277"}


id: MOD:01072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one potassium atom for one hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium containing modified residue","termid":"MOD:00849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopotassium salt","synonyms":[{"name":"K1Res","type":"exact"}],"termid":"MOD:01072"}


id: GO:0046596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the viral entry into the host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral entry into host cell","synonyms":[{"name":"regulation of viral penetration into host cell","type":"exact"},{"name":"viral escort protein","type":"related"}],"termid":"GO:0046596"}


id: PBO:0088247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11","termid":"PBO:0088247"}


id: GO:2001196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:2001194"},{"relation_name":"positively_regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"positive regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"positive regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001196"}


id: MONDO:0008630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary bladder, atony of","secondary_identifiers":["UMLS:C5231389","OMIM:191800","MEDGEN:1684829"],"synonyms":[{"name":"atony of urinary bladder","type":"exact"},{"name":"bladder dysfunction, autonomic, with impaired pupillary reflex and secondary CAKUT","type":"exact"},{"name":"urinary bladder, atony of","type":"exact"}],"termid":"MONDO:0008630","xrefs":{"Monarch":{"xref_id":"0008630"}}}


id: PBO:0048538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 4","termid":"PBO:0048538"}


id: PBO:0083409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR366W","termid":"PBO:0083409"}


id: GO:0010232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances, into, out of or within a cell, either in a vascular tissue or in the vascular membrane.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vascular transport","termid":"GO:0010232"}


id: MONDO:0016930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 9 disorder","termid":"MONDO:0700016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy/tetrasomy of chromosome 9","secondary_identifiers":["UMLS:C5816685","GARD:20850","MEDGEN:1841529","Orphanet:262643"],"synonyms":[{"name":"partial duplication/triplication of chromosome 9","type":"exact"},{"name":"partial trisomy/tetrasomy of chromosome type 9","type":"exact"}],"termid":"MONDO:0016930","xrefs":{"Monarch":{"xref_id":"0016930"}}}


id: PBO:0052579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase non-catalytic C-lobe domain containing 1","termid":"PBO:0052579"}


id: MONDO:0007822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete incisors, long upper central (obsolete MONDO:0007822)","secondary_identifiers":["OMIM:147300"],"synonyms":[{"name":"incisors, long upper central","type":"exact"}],"termid":"MONDO:0007822","xrefs":{"Monarch":{"xref_id":"0007822"}}}


id: PBO:0050489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXB cluster antisense RNA 4","termid":"PBO:0050489"}


id: GO:0015748
data:
  {"annotated_genes":["SJAG_02050","SJAG_02516","SJAG_05268","SJAG_00434","SJAG_03721","SJAG_05209","SJAG_03334","SJAG_03416","SJAG_01305","SJAG_02943","SJAG_03338","SJAG_03710","SJAG_00576","SJAG_02957","SJAG_00589","SJAG_00835","SJAG_00669","SJAG_02132","SJAG_01470","SJAG_01177","SJAG_04697","SJAG_03209","SJAG_04370","SJAG_03050","SJAG_00232","SJAG_03741","SJAG_00230","SJAG_01225","SJAG_04328","SJAG_00276","SJAG_00018","SJAG_00154","SJAG_04734","SJAG_16459","SJAG_06440","SJAG_01945","SJAG_00587","SJAG_00612","SJAG_03172","SJAG_03452","SJAG_05325","SJAG_02114","SJAG_03851","SJAG_01731","SJAG_00760","SJAG_03503","SJAG_02897","SJAG_04162","SJAG_03746","SJAG_04406","SJAG_01960","SJAG_01095","SJAG_00339","SJAG_03644","SJAG_01229","SJAG_04325","SJAG_02581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[74377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[68448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[74450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015917"},{"annotations":[93107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[71550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[102345,102343,102344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001407"},{"annotations":[63670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[90665,105609,108405,100284,101038,88988,106497,98386,107400,115984,103797,109276,97249,97310,107274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[101113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[101114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[58923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[102607,58922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[70279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[107315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[92669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[103390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[93108,76387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"},{"annotations":[59890,90280,62579,90281,90283,99235,72678,74459,90287,90282,90286,71757,74288,90285,72707,90288,101969,90284,109262,101040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[72957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[78999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"},{"annotations":[92875,112005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035436"},{"annotations":[88128,74673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[75705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[74939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[112120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[77425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[66184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of organophosphate esters into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organophosphate esters are small organic molecules containing phosphate ester bonds.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00154":null,"SJAG_00230":null,"SJAG_00232":null,"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00612":null,"SJAG_00669":null,"SJAG_00760":null,"SJAG_00835":null,"SJAG_01095":null,"SJAG_01177":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03209":null,"SJAG_03334":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04370":null,"SJAG_04406":null,"SJAG_04697":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_05325":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"organophosphate ester transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015748","terms_by_termid":{"GO:0001407":null,"GO:0015786":null,"GO:0015790":null,"GO:0015866":null,"GO:0015917":null,"GO:0017121":null,"GO:0035348":null,"GO:0035436":null,"GO:0036085":null,"GO:0045332":null,"GO:0072334":null,"GO:0097624":null,"GO:0120010":null,"GO:0120112":null,"GO:0140021":null,"GO:0140331":null,"GO:1903790":null,"GO:1990519":null,"GO:1990536":null,"GO:1990544":null,"GO:1990545":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null,"GO:1990569":null,"GO:1990570":null}}


id: GO:0021992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of expansion of cell numbers in the neural plate due to cell division of progenitor cells preferentially in the rostrocaudal direction, resulting in the elongation of the tissue.","definition_xrefs":["GOC:dph","PMID:15806586","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"neural plate elongation","termid":"GO:0014022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in neural plate elongation","termid":"GO:0021992"}


id: GO:0046500
data:
  {"annotated_genes":["SJAG_03659","SJAG_03556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006556"},{"annotations":[77322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033353"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03556":null,"SJAG_03659":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-adenosylmethionine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"S-adenosyl methionine metabolic process","type":"exact"},{"name":"S-adenosyl methionine metabolism","type":"exact"},{"name":"S-adenosylmethionine metabolism","type":"exact"},{"name":"SAM metabolic process","type":"exact"}],"termid":"GO:0046500","terms_by_termid":{"GO:0006556":null,"GO:0033353":null}}


id: PBO:0043462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 3","termid":"PBO:0043462"}


id: GO:0018238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form peptidyl-N6-1-carboxyethyl-L-lysine.","definition_xrefs":["RESID:AA0115"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine carboxyethylation (obsolete GO:0018238)","synonyms":[{"name":"protein amino acid carboxyethylation","type":"exact"}],"termid":"GO:0018238"}


id: PBO:0082525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell death protease essential for hypochlorite-induced apoptosis; involved in the processing of killer toxin and alpha factor precursor; cleaves Lys and Arg residues from the C-terminus of peptides and proteins","termid":"PBO:0082525"}


id: GO:1903837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["PMID:19575011","GO_REF:0000059","GOC:als","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA 3'-UTR binding (obsolete GO:1903837)","synonyms":[{"name":"regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903837"}


id: MONDO:0017135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Olivopontocerebellar atrophy-deafness syndrome is characterized by infancy-onset olivopontocerebellar atrophy, sensorineural deafness and speech impairment. It has been described in less than 15 children. Most cases were sporadic, but autosomal recessive inheritance was suggested in three cases.","definition_xrefs":["Orphanet:2732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olivopontocerebellar atrophy-deafness syndrome","secondary_identifiers":["GARD:4070","MEDGEN:905095","UMLS:C4275113"],"synonyms":[{"name":"olivopontocerebellar atrophy deafness","type":"related"}],"termid":"MONDO:0017135","xrefs":{"Monarch":{"xref_id":"0017135"}}}


id: PBO:0113381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative lipid transport protein; peripheral membrane protein required for vesicle formation during autophagy, pexophagy and the CVT pathway; directed to autophagic membranes by Atg18p where it acts as a PAS-ER membrane tether during autophagosome formation; involved in Atg9p cycling between the PAS and mitochondria; binds the phospholipid PI(3)P via an APT1 domain; essential for cell cycle progression from G2/M to G1 under nitrogen starvation; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0113381"}


id: PBO:0086013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0086013"}


id: MONDO:0016812
data:
  {"annotated_genes":["SJAG_03275","SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[84833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"}]},"cv_name":"mondo","definition":"Dopa-responsive dystonia (DRD) describes a group of neurometabolic disorders characterized by dystonia that typically shows diurnal fluctuations, that responds excellently to levodopa (L-dopa) and that is comprised of autosomal dominant dopa-responsive dystonia (DYT5a), autosomal recessive dopa-responsive dystonia (DYT5b) and dopa responsive dystonia due to sepiapterin reductase (SR) deficiency.","definition_xrefs":["Orphanet:255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"dopa-responsive dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C538007","NANDO:1200516","NCIT:C116719","NANDO:2200885","SCTID:230332007","GARD:12144","icd11.foundation:1534901505"],"synonyms":[{"name":"DYT-GCH1 (subtype)","type":"related"},{"name":"DYT-SPR (subtype)","type":"related"},{"name":"DYT-TH (subtype)","type":"related"},{"name":"DYT5","type":"related"},{"name":"DYT5 dystonia","type":"exact"},{"name":"HPD with diurnal fluctuation","type":"exact"},{"name":"Segawa's disease","type":"exact"},{"name":"dopa-responsive dystonia","type":"exact"},{"name":"hereditary progressive dystonia with diurnal fluctuation","type":"exact"}],"termid":"MONDO:0016812","terms_by_termid":{"MONDO:0007495":null,"MONDO:0012994":null},"xrefs":{"Monarch":{"xref_id":"0016812"}}}


id: PR:P40389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-lysine N-methyltransferase rrg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.11c","synonyms":[{"name":"Spom972h-rrg1","type":"exact"},{"name":"elongation factor methyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rapid response to glucose protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40389"}


id: _global:directly_negatively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"_global:directly_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_negatively_regulated_by","secondary_identifiers":["RO:0002023"],"termid":"_global:directly_negatively_regulated_by"}


id: GO:0050311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 oxidized ferredoxin + 3 H2O = sulfite + 3 reduced ferredoxin.","definition_xrefs":["EC:1.8.7.1","MetaCyc:SULFITE-REDUCTASE-FERREDOXIN-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor","termid":"GO:0016673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulfite reductase (ferredoxin) activity","secondary_identifiers":["RHEA:23132"],"synonyms":[{"name":"ferredoxin-sulfite reductase activity","type":"related"},{"name":"hydrogen-sulfide:ferredoxin oxidoreductase activity","type":"related"},{"name":"sulphite reductase (ferredoxin) activity","type":"exact"}],"termid":"GO:0050311"}


id: PBO:0036002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_sumoylation_during_vegetative_growth","termid":"PBO:0036002"}


id: PBO:0040083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARSD antisense RNA 1","termid":"PBO:0040083"}


id: MONDO:0800142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immunodeficiency disease caused by a variation in MAPK8, the gene encoding c-Jun N-terminal kinase 1 (JNK1), that is characterized by chronic mucocutaneous candidiasis and a connective tissue disorder that clinically overlaps with Ehlers-Danlos syndrome (EDS).","definition_xrefs":["PMID:31784499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"chronic mucocutaneous candidiasis and connective tissue disease due to JNK1 haploinsufficiency","synonyms":[{"name":"JNK1 haploinsufficiency (causing combination of chronic mucocutaneous candidiasis and connective tissue disease)","type":"exact"}],"termid":"MONDO:0800142","xrefs":{"Monarch":{"xref_id":"0800142"}}}


id: PBO:0059643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 9","termid":"PBO:0059643"}


id: PBO:0031336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_benomyl","termid":"PBO:0031336"}


id: MONDO:1011982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia, non-human animal","secondary_identifiers":["OMIA:000881"],"termid":"MONDO:1011982","xrefs":{"Monarch":{"xref_id":"1011982"}}}


id: MONDO:0018296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with developmental anomaly (obsolete MONDO:0018296)","secondary_identifiers":["Orphanet:371235"],"synonyms":[{"name":"CDG with developmental anomaly","type":"exact"}],"termid":"MONDO:0018296","xrefs":{"Monarch":{"xref_id":"0018296"}}}


id: MONDO:0858958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anaplastic astrocytoma that is characterized by high-grade piloid and/or glioblastoma-like histological features. It may occur anywhere in the central nervous system but most often arises in the posterior fossa.","definition_xrefs":["DOID:0081304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaplastic astrocytoma","termid":"MONDO:0016684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"high-grade astrocytoma with piloid features","secondary_identifiers":["NCIT:C185879","UMLS:C5670122","MEDGEN:1812304"],"termid":"MONDO:0858958","xrefs":{"Monarch":{"xref_id":"0858958"}}}


id: PBO:0056734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 3","termid":"PBO:0056734"}


id: PBO:0045783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDAR associated via death domain","termid":"PBO:0045783"}


id: GO:0018626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-chlorobenzoate + NADH + H+ + O2 = catechol + chloride + NAD+ + CO2.","definition_xrefs":["EC:1.14.12.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-chlorobenzoate 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:2-CHLOROBENZOATE-12-DIOXYGENASE-RXN","RHEA:21652","UM-BBD_reactionID:r0632"],"synonyms":[{"name":"2-chlorobenzoate,NADH:oxygen oxidoreductase (1,2-hydroxylating, dechlorinating, decarboxylating)","type":"related"},{"name":"2-halobenzoate 1,2-dioxygenase activity","type":"exact"}],"termid":"GO:0018626"}


id: PBO:0082892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase (CDK) inhibitor; regulates Pho80p-Pho85p and Pcl7p-Pho85p cyclin-CDK complexes in response to phosphate levels; inhibitory activity for Pho80p-Pho85p requires myo-D-inositol heptakisphosphate (IP7) generated by Vip1p; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0082892"}


id: FYPO:0004660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to methyl methanesulfonate","synonyms":[{"name":"abolished protein phosphorylation during cellular response to MMS","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to methyl methanesulphonate","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0004660"}


id: PBO:0084674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial arginyl-tRNA synthetase; mutations in human ortholog are associated with pontocerebellar hypoplasia type 6; MSR1 has a paralog, YDR341C, that arose from the whole genome duplication","termid":"PBO:0084674"}


id: PBO:0047186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 204 member B, pseudogene","termid":"PBO:0047186"}


id: GO:0035212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells.","definition_xrefs":["PMID:15066286","GOC:bf","PMID:1116643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell competition in a multicellular organism","termid":"GO:0035212"}


id: MONDO:0003649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the esophagus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neuroendocrine tumor, grade 1/2","termid":"MONDO:0000386"},{"relation_name":"is_a","term_name":"neoplasm of esophagus","termid":"MONDO:0021355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophageal neuroendocrine tumor","secondary_identifiers":["GARD:22058","MEDGEN:459486","NCIT:C95616","Orphanet:506136","UMLS:C2987260","DOID:5784"],"synonyms":[{"name":"NEN of esophagus","type":"exact"},{"name":"NEN of oesophagus","type":"exact"},{"name":"esophageal NEN","type":"exact"},{"name":"esophageal NET","type":"exact"},{"name":"esophageal neuroendocrine neoplasm","type":"exact"},{"name":"esophageal neuroendocrine tumor","type":"exact"},{"name":"esophageal well differentiated endocrine tumor","type":"exact"},{"name":"esophageal well differentiated endocrine tumor/carcinoma","type":"exact"},{"name":"esophageal well differentiated endocrine tumour","type":"exact"},{"name":"esophagus NET","type":"exact"},{"name":"esophagus neuroendocrine neoplasm","type":"exact"},{"name":"esophagus neuroendocrine tumor","type":"exact"},{"name":"esophagus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"neuroendocrine neoplasm of esophagus","type":"exact"},{"name":"neuroendocrine neoplasm of oesophagus","type":"exact"},{"name":"neuroendocrine tumor of esophagus","type":"exact"},{"name":"neuroendocrine tumour of oesophagus","type":"exact"},{"name":"oesophagus NET","type":"exact"},{"name":"oesophagus neuroendocrine neoplasm","type":"exact"},{"name":"oesophagus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"oesophagus neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0003649","xrefs":{"Monarch":{"xref_id":"0003649"}}}


id: GO:2001291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving codeine, an alkaloid found in the opium poppy, Papaver somniferum var. album. Codeine has analgesic, anti-tussive and anti-diarrhoeal properties.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"codeine metabolic process","synonyms":[{"name":"codeine metabolism","type":"exact"}],"termid":"GO:2001291"}


id: PBO:0003961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpb8","termid":"PBO:0003961"}


id: MONDO:0012873
data:
  {"annotated_genes":["SJAG_00222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86835],"is_not":false,"summary":null,"term":"MONDO:0012873"}]},"cv_name":"mondo","definition":"Ehlers-Danlos syndrome, spondylocheirodysplastic type is a subtype of Ehlers-Danlos syndrome characterized by skeletal dysplasia comprising platyspondyly with moderate short stature, osteopenia and widened metaphyses, in addition to hyperextensible, thin, easily bruised skin, hypermobility of small joints with tendency to contractures, prominent eyes with bluish sclerae, wrinkled palms, atrophy of the thenar muscle and tapering fingers.","definition_xrefs":["Orphanet:157965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, spondylodysplastic type","termid":"MONDO:0007526"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00222":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005497"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, spondylocheirodysplastic type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567340","icd11.foundation:1653521697","UMLS:C2676510","GARD:12610","OMIM:612350","DOID:0080739","MEDGEN:393515"],"synonyms":[{"name":"EDS, spondylocheirodysplastic type","type":"exact"},{"name":"EDSSPD3","type":"related"},{"name":"Ehlers-Danlos syndrome, spondylodysplastic type, 3","type":"related"},{"name":"SCD-EDS","type":"related"},{"name":"spondylocheirodysplasia, Ehlers-Danlos syndrome-like","type":"related"}],"termid":"MONDO:0012873","terms_by_termid":{"MONDO:0012873":null},"xrefs":{"Monarch":{"xref_id":"0012873"}}}


id: FYPO:0007830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein located in the medial cortical nodes occupies an area with a smaller radius than normal during interphase of the mitotic cell cycle. The nodes are \\\"precursor\\\" nodes that exist before the contractile ring is formed.","definition_xrefs":["PomBase:mah","PMID:33496728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"narrow protein radial density distribution in medial cortical node during mitotic interphase","synonyms":[{"name":"decreased protein RDD in medial cortical node during mitotic interphase","type":"exact"},{"name":"decreased protein radial density distribution in medial cortical node during mitotic interphase","type":"exact"},{"name":"narrow protein RDD in medial cortical node during mitotic interphase","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical P-node","type":"related"},{"name":"narrow protein radial density distribution in medial cortical node during interphase of mitotic cell cycle","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical node during mitotic interphase during vegetative growth","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical precursor node","type":"related"},{"name":"narrow radial density distribution of protein in medial cortical node during mitotic interphase","type":"exact"},{"name":"reduced protein radial density distribution in medial cortical node during mitotic interphase","type":"exact"}],"termid":"FYPO:0007830"}


id: PBO:0029483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_swollen_curved_cells_(obsolete_FYPO:0002232)","termid":"PBO:0029483"}


id: PBO:0044931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase kappa","termid":"PBO:0044931"}


id: PBO:0049894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 4","termid":"PBO:0049894"}


id: PBO:0076228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit pseudogene 1","termid":"PBO:0076228"}


id: GO:0030224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"},{"relation_name":"is_a","term_name":"mononuclear cell differentiation","termid":"GO:1903131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte differentiation","synonyms":[{"name":"monocyte cell differentiation","type":"exact"}],"termid":"GO:0030224"}


id: GO:0000741
data:
  {"annotated_genes":["SJAG_01613","SJAG_02737","SJAG_02286","SJAG_00810","SJAG_02045","SJAG_01370","SJAG_04936"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116686,91149,87521,90758,98982,78442,111213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000742"},{"annotations":[78443],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048288"}]},"cv_name":"biological_process","definition":"The creation of a single nucleus from multiple nuclei as a result of fusing the lipid bilayers that surround each nuclei.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00810":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02737":null,"SJAG_04936":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"karyogamy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Karyogamy","GO:0007335"],"synonyms":[{"name":"nuclear fusion","type":"exact"},{"name":"nuclear fusion during karyogamy","type":"exact"}],"termid":"GO:0000741","terms_by_termid":{"GO:0000742":null,"GO:0048288":null}}


id: PBO:0000654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM binding protein homolog Mcb1 (predicted)","termid":"PBO:0000654"}


id: MONDO:0020044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive metabolic cerebellar ataxia","secondary_identifiers":["GARD:19413","UMLS:C5681517","MEDGEN:1842756","Orphanet:98096"],"termid":"MONDO:0020044","xrefs":{"Monarch":{"xref_id":"0020044"}}}


id: FYPO:0006364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which meiotic spindle microtubules become disconnected from the spindle pole body during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:24954111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology during meiosis I","termid":"FYPO:0005652"},{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology during meiosis I","termid":"FYPO:0006022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000631","FYPO:0002399","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000120","FYPO:0000121"],"is_obsolete":false,"name":"spindle microtubules detached from spindle pole body during meiosis I","synonyms":[{"name":"meiotic spindle microtubules detached from spindle pole body during meiosis I","type":"exact"},{"name":"non-polar spindle during meiosis I","type":"related"},{"name":"spindle microtubules detached from SPB during meiosis I","type":"exact"},{"name":"spindle microtubules detached from spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"spindle pole body detached from spindle microtubules during meiosis I","type":"exact"}],"termid":"FYPO:0006364"}


id: GO:0006906
data:
  {"annotated_genes":["SJAG_02241","SJAG_03552","SJAG_02587","SJAG_02315","SJAG_04978","SJAG_04513","SJAG_00430","SJAG_03347","SJAG_04739","SJAG_05184","SJAG_03848","SJAG_00826","SJAG_00171","SJAG_01379","SJAG_01324","SJAG_00380","SJAG_03889","SJAG_03403","SJAG_00557","SJAG_00204","SJAG_04023","SJAG_01697","SJAG_03670","SJAG_01633","SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71820,75955,76333,77525,77788,90342,97852,100610,100838,109406,112433,117253,117298],"is_not":false,"summary":null,"term":"GO:0006906"},{"annotations":[99273,99475,79506,74368,76971,70998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[95703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[75282],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[73646,75792,77437,57721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"Fusion of the membrane of a transport vesicle with its target membrane.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"vesicle fusion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006906","terms_by_termid":{"GO:0006906":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null}}


id: PBO:0076144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 3","termid":"PBO:0076144"}


id: PBO:0032704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G2_phase_during_glucose_starvation","termid":"PBO:0032704"}


id: GO:0075316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of basidium development, a process that leads to the formation of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to basidiomycetes and distinguishes them from other kinds of fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of basidium development","termid":"GO:0075314"},{"relation_name":"negatively_regulates","term_name":"basidium development","termid":"GO:0075313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of basidium development","termid":"GO:0075316"}


id: MONDO:0013754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive cutis laxa type I characterized by disturbed elastic fiber formation resulting in severe systemic connective tissue abnormalities that has material basis in homozygous or compound heterozygous mutation in the EFEMP2 gene on chromosome 11q13.","definition_xrefs":["DOID:0070133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 1","termid":"MONDO:0019572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 1B","secondary_identifiers":["UMLS:C3280798","GARD:15804","MEDGEN:482428","OMIM:614437"],"synonyms":[{"name":"ARCL1B","type":"exact"},{"name":"autosomal recessive cutis laxa type IB","type":"related"},{"name":"cutis laxa, autosomal recessive, type IB","type":"related"}],"termid":"MONDO:0013754","xrefs":{"Monarch":{"xref_id":"0013754"}}}


id: MOD:01875
data:
  {"annotated_genes":["SJAG_03641","SJAG_00464"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[80495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N6-amino hydrogen atom of L-lysine with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00464":null,"SJAG_03641":null},"genotype_count":0,"is_obsolete":false,"name":"N6-acylated L-lysine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"N6AcylLys","type":"exact"}],"termid":"MOD:01875","terms_by_termid":{"MOD:00126":null,"MOD:00127":null}}


id: MOD:01311
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent heavy (+3amu) form group.","definition_xrefs":["PubMed:11698400","PubMed:11914093","PubMed:11857757","Unimod:61#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+3amu) N6-L-lysine","synonyms":[{"name":"GIST-Quat:2H(3)","type":"related"},{"name":"Quaternary amine labeling reagent heavy (+3amu) form, N-term & K","type":"related"}],"termid":"MOD:01311"}


id: SO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element that has consensus sequence GTAAACAAACAAAM and contains a heptameric core GTAAACA, bound by transcription factors with a forkhead DNA-binding domain.","definition_xrefs":["PMID:10747048","PMID:14871934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLEX_element","synonyms":[{"name":"FLEX element","type":"related"}],"termid":"SO:0001846"}


id: MONDO:0012109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 4","secondary_identifiers":["OMIM:608742","MEDGEN:325180","UMLS:C1837479"],"synonyms":[{"name":"Hyt4","type":"related"},{"name":"hypertension, essential, susceptibility to, 4","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 4","type":"exact"}],"termid":"MONDO:0012109","xrefs":{"Monarch":{"xref_id":"0012109"}}}


id: FYECO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which pyrogallol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ pyrogallol","termid":"FYECO:0000456"}


id: GO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(5-deoxy-D-ribos-5-yl)-L-homocysteine = (S)-4,5-dihydroxypentane-2,3-dione + L-homocysteine.","definition_xrefs":["RHEA:17753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"S-ribosylhomocysteine lyase activity","secondary_identifiers":["MetaCyc:RIBOSYLHOMOCYSTEINASE-RXN","EC:4.4.1.21","GO:0019138","KEGG_REACTION:R01291"],"synonyms":[{"name":"LuxS","type":"related"},{"name":"S-(5-deoxy-D-ribos-5-yl)-L-homocysteine homocysteine-lyase [(4S)-4,5-dihydroxypentan-2,3-dione-forming]","type":"related"},{"name":"S-ribosylhomocysteinase activity","type":"exact"},{"name":"ribosylhomocysteinase activity","type":"exact"}],"termid":"GO:0043768"}


id: RO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x main_stem_of y if y is a branching structure and x is a channel that traces a linear path through y, such that x has higher capacity than any other such path.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"main_stem_of","termid":"RO:0002381"}


id: GO:0045593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ovarian cumulus cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of cumulus cell differentiation","termid":"GO:0045592"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"cumulus cell differentiation","termid":"GO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cumulus cell differentiation","synonyms":[{"name":"down regulation of cumulus cell differentiation","type":"exact"},{"name":"down-regulation of cumulus cell differentiation","type":"exact"},{"name":"downregulation of cumulus cell differentiation","type":"exact"},{"name":"inhibition of cumulus cell differentiation","type":"narrow"},{"name":"negative regulation of ovarian cumulus cell differentiation","type":"exact"}],"termid":"GO:0045593"}


id: SO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An MGE that is integrated into the host chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_genetic_element","termid":"SO:0001037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrated_mobile_genetic_element","synonyms":[{"name":"integrated mobile genetic element","type":"exact"}],"termid":"SO:0001039"}


id: GO:0051019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitogen-activated protein kinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"mitogen-activated protein kinase binding","synonyms":[{"name":"MAP kinase binding","type":"exact"},{"name":"MAP-kinase anchoring activity","type":"related"},{"name":"MAPK binding","type":"exact"}],"termid":"GO:0051019"}


id: GO:1901246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung ciliated cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lung ciliated cell differentiation","termid":"GO:0061141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung ciliated cell differentiation","termid":"GO:1901246"}


id: PBO:0052208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 4","termid":"PBO:0052208"}


id: FYPO:0002366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methylation during vegetative growth","termid":"FYPO:0000870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4me during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 methylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002366"}


id: GO:0075012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of germ tube formation on or near host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of germ tube formation","termid":"GO:0075010"},{"relation_name":"negatively_regulates","term_name":"germ tube formation","termid":"GO:0075009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of germ tube formation","synonyms":[{"name":"negative regulation of germ tube formation on or near host","type":"exact"}],"termid":"GO:0075012"}


id: GO:0042574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid metabolic process","termid":"GO:0001523"},{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"retinal metabolic process","synonyms":[{"name":"retinal metabolism","type":"exact"},{"name":"retinaldehyde metabolic process","type":"exact"},{"name":"retinaldehyde metabolism","type":"exact"}],"termid":"GO:0042574"}


id: MONDO:0020692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive spondylocostal dysostosis","termid":"MONDO:0010180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0024322","MONDO:0005497"],"is_obsolete":false,"name":"spondylocostal dysostosis 1, autosomal recessive","secondary_identifiers":["GARD:10726","DOID:0112365","OMIM:277300"],"synonyms":[{"name":"SCDO1","type":"related"},{"name":"spondylocostal dysostosis 1, autosomal recessive","type":"exact"},{"name":"spondylothoracic dysostosis","type":"related"},{"name":"spondylothoracic dysplasia","type":"related"},{"name":"vertebral anomalies","type":"related"}],"termid":"MONDO:0020692","xrefs":{"Monarch":{"xref_id":"0020692"}}}


id: PR:O42915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin fusion degradation protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12555:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fusion degradation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.09c","secondary_identifiers":["UniProtKB:O42915"],"synonyms":[{"name":"SPBC16A3.09c","type":"related"},{"name":"Spom972h-UFD1L","type":"exact"},{"name":"UB fusion protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42915"}


id: PR:P15258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ral2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P15258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ral2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.05c","synonyms":[{"name":"Spom972h-ral2","type":"exact"}],"termid":"PR:P15258"}


id: MONDO:0020037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare female reproductive system neoplasm.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare gynecological tumor (obsolete MONDO:0020037)","secondary_identifiers":["Orphanet:98063"],"synonyms":[{"name":"rare female reproductive system neoplasm","type":"exact"},{"name":"rare gynecological cancer","type":"exact"},{"name":"rare gynecological neoplasm","type":"exact"}],"termid":"MONDO:0020037","xrefs":{"Monarch":{"xref_id":"0020037"}}}


id: PBO:0049487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.9 linker histone, pseudogene","termid":"PBO:0049487"}


id: PBO:0004495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumble family pantothenate kinase (predicted)","termid":"PBO:0004495"}


id: GO:0035179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fine-tuning the spatial position of a larva in response to variability in their environment. For example, reorientation of a larva in the direction of a food source.","definition_xrefs":["PMID:10880478"],"gene_count":0,"genotype_count":0,"name":"obsolete larval turning behavior (obsolete GO:0035179)","synonyms":[{"name":"larval turning behaviour","type":"exact"}],"termid":"GO:0035179"}


id: PBO:0041631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 1","termid":"PBO:0041631"}


id: PBO:0077294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 37","termid":"PBO:0077294"}


id: PBO:0086117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for degradation of unstable forms of cytochrome c; located in the mitochondria","termid":"PBO:0086117"}


id: GO:0072672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a neutrophil from the blood vessels into the surrounding tissue.","definition_xrefs":["GOC:BHF","CL:0000775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil extravasation","termid":"GO:0072672"}


id: GO:2001069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to glycogen.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glycogen binding","synonyms":[{"name":"animal starch binding","type":"related"},{"name":"liver starch binding","type":"related"}],"termid":"GO:2001069"}


id: GO:0045784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the concentration of calcium in the ER.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium in ER (obsolete GO:0045784)","synonyms":[{"name":"positive regulation of calcium in ER","type":"exact"}],"termid":"GO:0045784"}


id: MONDO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually solitary polypoid lesion that arises from the cervix. It usually affects women in their reproductive years. It is characterized by the presence of a connective tissue core and overlying epithelium.","definition_xrefs":["NCIT:C40200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical polyp","termid":"MONDO:0000751"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical fibroepithelial polyp","secondary_identifiers":["UMLS:C1516413","MEDGEN:308945"],"synonyms":[{"name":"Cervical fibroepithelial polyp","type":"exact"},{"name":"uterine cervix fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0060777","xrefs":{"Monarch":{"xref_id":"0060777"}}}


id: MONDO:0002917
data:
  {"annotated_genes":["SJAG_00155","SJAG_02536","SJAG_01202","SJAG_03469","SJAG_03126","SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014027"},{"annotations":[86213,86214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014384"},{"annotations":[86036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032649"},{"annotations":[85285,85286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"A disease that involves the pilosebaceous unit.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00155":null,"SJAG_00624":null,"SJAG_01202":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_03469":null},"genotype_count":0,"is_obsolete":false,"name":"disorder of pilosebaceous unit","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:201128002","MEDGEN:640417","UMLS:C0554472","ICD9:704.8","ICD9:704.9","DOID:421","NCIT:C34656","MESH:D006201"],"synonyms":[{"name":"disease of pilosebaceous unit","type":"exact"},{"name":"disease or disorder of pilosebaceous unit","type":"exact"},{"name":"disorder of pilosebaceous unit","type":"exact"},{"name":"hair and hair follicle diseases","type":"exact"},{"name":"hair disease","type":"narrow"},{"name":"hair disorder","type":"exact"},{"name":"hair/hair follicle diseases","type":"exact"},{"name":"pilosebaceous unit disease","type":"exact"},{"name":"pilosebaceous unit disease or disorder","type":"exact"}],"termid":"MONDO:0002917","terms_by_termid":{"MONDO:0014027":null,"MONDO:0014384":null,"MONDO:0032649":null,"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0002917"}}}


id: PBO:0061903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid receptor mu 1","termid":"PBO:0061903"}


id: PBO:0083356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene NUM1/YDR150W; null mutation blocks anaerobic growth","termid":"PBO:0083356"}


id: GO:0036100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"leukotriene catabolic process","synonyms":[{"name":"leukotriene breakdown","type":"exact"},{"name":"leukotriene catabolism","type":"exact"},{"name":"leukotriene degradation","type":"exact"}],"termid":"GO:0036100"}


id: MONDO:0011428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any EEC syndrome in which the cause of the disease is a mutation in the TP63 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EEC syndrome","termid":"MONDO:0010004"},{"relation_name":"is_a","term_name":"TP63-related ectodermal dysplasia spectrum with limb and orofacial malformations","termid":"MONDO:1040001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"ectrodactyly, ectodermal dysplasia, and cleft lip-palate syndrome 3","secondary_identifiers":["DOID:0060783","MEDGEN:347666","OMIM:604292","MESH:C565799","UMLS:C1858562"],"synonyms":[{"name":"EEC syndrome 3","type":"exact"},{"name":"EEC syndrome caused by mutation in TP63","type":"exact"},{"name":"EEC3","type":"exact"},{"name":"TP63 EEC syndrome","type":"exact"},{"name":"ectrodactyly, ectodermal dysplasia, and cleft LIP/palate syndrome 3","type":"related"},{"name":"ectrodactyly, ectodermal dysplasia, and cleft Lip/palate syndrome type 3","type":"exact"},{"name":"ectrodactyly, ectodermal dysplasia, and cleft lip-palate syndrome type 3","type":"exact"}],"termid":"MONDO:0011428","xrefs":{"Monarch":{"xref_id":"0011428"}}}


id: GO:0046151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"},{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment catabolic process","synonyms":[{"name":"eye pigment breakdown","type":"exact"},{"name":"eye pigment catabolism","type":"exact"},{"name":"eye pigment degradation","type":"exact"}],"termid":"GO:0046151"}


id: PBO:0050960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 3","termid":"PBO:0050960"}


id: MONDO:0004760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral false passage","secondary_identifiers":["MEDGEN:510227","ICD9:599.4","DOID:9339","ICD10CM:N36.5","SCTID:74944002","UMLS:C0156286"],"termid":"MONDO:0004760","xrefs":{"Monarch":{"xref_id":"0004760"}}}


id: RO:0002409
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"negatively_regulates","termid":"RO:0002212"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_inhibits","termid":"RO:0002409"}


id: GO:0032809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The plasma membrane of a neuron cell body - excludes the plasma membrane of cell projections such as axons and dendrites.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body membrane","termid":"GO:0044298"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"neuronal cell body membrane","synonyms":[{"name":"neuron cell body membrane","type":"exact"},{"name":"neuronal cell soma membrane","type":"exact"}],"termid":"GO:0032809"}


id: GO:0034241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage fusion","termid":"GO:0034239"},{"relation_name":"is_a","term_name":"positive regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060143"},{"relation_name":"positively_regulates","term_name":"macrophage fusion","termid":"GO:0034238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage fusion","termid":"GO:0034241"}


id: FYPO:0004403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of JM216 (also called satraplatin) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to JM216","synonyms":[{"name":"resistance to JM216 during mitotic cell cycle","type":"related"},{"name":"resistance to JM216 during vegetative growth","type":"exact"},{"name":"resistance to satraplatin","type":"exact"},{"name":"resistant to JM216","type":"exact"}],"termid":"FYPO:0004403"}


id: GO:0044120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring in a host vacuole. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont in host vacuole (obsolete GO:0044120)","synonyms":[{"name":"development of symbiont in host organelle","type":"broad"}],"termid":"GO:0044120"}


id: FYPO:0007968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle after normal chromosome separation in which pushing forces exerted by microtubules protruding from the spindle pole bodies displace one of the daughter nuclei to the site of cytokinesis. The septum then physically divides that nucleus into two parts, giving rise to inviable daughter cell.","definition_xrefs":["PMID:26031557","PomBase:mlr","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut following normal mitotic chromosome condensation","termid":"FYPO:0001055"},{"relation_name":"output_of","term_name":"long mitotic spindle microtubules protruding beyond spindle pole body","termid":"FYPO:0003787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000120"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000631","FYPO:0005447","FYPO:0000337","FYPO:0000004","FYPO:0002403","FYPO:0001320","FYPO:0000641","FYPO:0000032","FYPO:0000120","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"cut with mitotic spindle microtubules protruding beyond spindle pole body","termid":"FYPO:0007968"}


id: PBO:0030951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_mitochondrion_distribution","termid":"PBO:0030951"}


id: MONDO:0008111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculodentodigital dysplasia (ODDD) is characterized by craniofacial, neurologic, limb and ocular abnormalities.","definition_xrefs":["Orphanet:2710"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"oculodentodigital dysplasia","secondary_identifiers":["MESH:C563160","NORD:1519","OMIM:164200","SCTID:38215007","UMLS:C0812437","GARD:7239","DOID:0060291","MedDRA:10063691","MEDGEN:167236","ICD9:759.89"],"synonyms":[{"name":"Meyer-Schwickerath syndrome","type":"exact"},{"name":"ODDD","type":"related"},{"name":"ODDD syndrome","type":"exact"},{"name":"Oculo-Dento-Digital Dysplasia","type":"exact"},{"name":"oculo-dento-digital dysplasia","type":"exact"},{"name":"oculo-dento-digital syndrome","type":"related"},{"name":"oculodentodigital dysplasia","type":"exact"},{"name":"oculodentodigital syndrome","type":"related"},{"name":"oculodentoosseous dysplasia","type":"exact"},{"name":"odd syndrome","type":"exact"}],"termid":"MONDO:0008111","xrefs":{"Monarch":{"xref_id":"0008111"}}}


id: PBO:0068860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 100, pseudogene","termid":"PBO:0068860"}


id: PBO:0069598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 875, pseudogene","termid":"PBO:0069598"}


id: PBO:0084166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of mitochondrial pyruvate carrier (MPC); MPC is a mitochondrial inner membrane complex that mediates pyruvate uptake and comprises Mpc1p and Mpc2p during fermentative growth, or Mcp1p and Mpc3p during respiratory growth; null mutant displays slow growth that is complemented by expression of human or mouse ortholog; mutation in human ortholog MPC1 is associated with lactic acidosis and hyperpyruvatemia","termid":"PBO:0084166"}


id: PBO:0067499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 635, pseudogene","termid":"PBO:0067499"}


id: PBO:0116222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, UPF0047 family, implicated in thiamine or TPP metabolism","termid":"PBO:0116222"}


id: MONDO:0009661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucopolysaccharidosis type 6 (MPS 6) is a lysosomal storage disease with progressive multisystem involvement, associated with a deficiency of arylsulfatase B (ASB) leading to the accumulation of dermatan sulfate.","definition_xrefs":["Orphanet:583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005328","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"mucopolysaccharidosis type 6","secondary_identifiers":["icd11.foundation:1288379621","NORD:1405","NANDO:2200551","MESH:D009087","NANDO:1200110","MEDGEN:44514","DOID:12800","GARD:7095","NANDO:1200108","NCIT:C61264","SCTID:52677002","SCTID:69463008","UMLS:C0026709","NANDO:1200109","OMIM:253200","MedDRA:10056892"],"synonyms":[{"name":"ARSB deficiency","type":"exact"},{"name":"ASB deficiency","type":"exact"},{"name":"Arsb deficiency","type":"related"},{"name":"MPS 6","type":"related"},{"name":"MPS VI","type":"related"},{"name":"MPS VI - Maroteaux-Lamy syndrome","type":"exact"},{"name":"MPS6","type":"exact"},{"name":"MPSVI","type":"exact"},{"name":"Maroteaux - Lamy syndrome","type":"exact"},{"name":"Maroteaux Lamy Syndrome","type":"exact"},{"name":"Maroteaux Lamy syndrome","type":"related"},{"name":"Maroteaux-Lamy disease","type":"exact"},{"name":"Maroteaux-Lamy syndrome","type":"exact"},{"name":"Mucopoly-saccharidosis type VI","type":"related"},{"name":"N-acetylgalactosamine 4-sulfatase deficiency","type":"exact"},{"name":"N-acetylgalactosamine-4-sulfatase deficiency","type":"related"},{"name":"arylsulfatase B deficiency","type":"exact"},{"name":"deficiency of N-acetylgalactosamine-4-sulfatase","type":"exact"},{"name":"mucopolysaccharidosis VI","type":"related"},{"name":"mucopolysaccharidosis type VI","type":"exact"},{"name":"mucopolysaccharidosis type VI (Maroteaux-Lamy)","type":"exact"}],"termid":"MONDO:0009661","xrefs":{"Monarch":{"xref_id":"0009661"}}}


id: GO:1900931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-tyrosine import into the cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-tyrosine import across plasma membrane","termid":"GO:1900929"},{"relation_name":"positively_regulates","term_name":"L-tyrosine import across plasma membrane","termid":"GO:1903808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-tyrosine import across plasma membrane","synonyms":[{"name":"activation of L-tyrosine import","type":"narrow"},{"name":"activation of L-tyrosine uptake","type":"narrow"},{"name":"positive regulation of L-tyrosine import","type":"broad"},{"name":"positive regulation of L-tyrosine uptake","type":"related"},{"name":"up regulation of L-tyrosine import","type":"exact"},{"name":"up regulation of L-tyrosine uptake","type":"related"},{"name":"up-regulation of L-tyrosine import","type":"exact"},{"name":"up-regulation of L-tyrosine uptake","type":"related"},{"name":"upregulation of L-tyrosine import","type":"exact"},{"name":"upregulation of L-tyrosine uptake","type":"related"}],"termid":"GO:1900931"}


id: PBO:0015699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Hsp3101","termid":"PBO:0015699"}


id: PR:Q9P5N1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P5N1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell-type specific agglutination protein C359.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.04c","synonyms":[{"name":"Spom972h-pfl7","type":"exact"}],"termid":"PR:Q9P5N1"}


id: PBO:0089242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 9","termid":"PBO:0089242"}


id: PBO:0027272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_vegetative_growth","termid":"PBO:0027272"}


id: FYPO:0004689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from cenH measured in a cell is higher than normal. cenH is a region located between mat2-P and mat3-M that is homologous to centromeric repeats, and that produces non-coding RNAs and small interfering RNAs.","definition_xrefs":["PMID:21253571","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased cenH-derived RNA level","synonyms":[{"name":"accumulation of cenH-derived RNA transcripts","type":"related"},{"name":"increased cenH RNA level","type":"exact"},{"name":"increased cenH-derived RNA accumulation","type":"related"},{"name":"increased cenH-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased cenH-derived RNA level during vegetative growth","type":"exact"},{"name":"increased cenH-derived RNA transcript level","type":"exact"}],"termid":"FYPO:0004689"}


id: SO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of sequence from the SVA family of mobile elements.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_element_insertion","termid":"SO:0001837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVA_insertion","termid":"SO:0002065"}


id: PBO:0091721
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure update","termid":"PBO:0091721"}


id: MONDO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Signs and symptoms related to acute ischemia of the myocardium secondary to coronary artery disease. The clinical presentation covers a spectrum of heart diseases from unstable angina to myocardial infarction.","definition_xrefs":["NCIT:C53652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"myocardial ischemia","termid":"MONDO:0024644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute coronary syndrome","secondary_identifiers":["UMLS:C0948089","EFO:0005672","MEDGEN:215295","MESH:D054058","SCTID:394659003"],"synonyms":[{"name":"acute coronary syndrome","type":"exact"},{"name":"acute coronary syndromes","type":"related"},{"name":"coronary syndrome, acute","type":"related"},{"name":"coronary syndromes, acute","type":"related"},{"name":"syndrome, acute coronary","type":"related"},{"name":"syndromes, acute coronary","type":"related"}],"termid":"MONDO:0005542","xrefs":{"Monarch":{"xref_id":"0005542"}}}


id: GO:0015747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of urate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"urate transport","synonyms":[{"name":"urate transmembrane transport","type":"exact"},{"name":"uric acid transport","type":"exact"}],"termid":"GO:0015747"}


id: GO:1904227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycogen synthase activity, transferring glucose-1-phosphate.","definition_xrefs":["GOC:TermGenie","GOC:rl","PMID:17569761","GOC:BHF","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycogen synthase activity, transferring glucose-1-phosphate","synonyms":[{"name":"down regulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"down-regulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"downregulation of glycogen synthase activity, transferring glucose-1-phosphate","type":"exact"},{"name":"inhibition of glycogen synthase activity, transferring glucose-1-phosphate","type":"narrow"}],"termid":"GO:1904227"}


id: MONDO:0958241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial hypertrophic, 30, atrial","secondary_identifiers":["OMIM:620734","UMLS:C5935586","MEDGEN:1858408"],"termid":"MONDO:0958241","xrefs":{"Monarch":{"xref_id":"0958241"}}}


id: MONDO:0100370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A new infection by the hepatitis B virus, which can be transmitted by direct contact of infected blood with mucous membranes or open areas of the skin. Signs and symptoms may include loss of appetite, joint and muscle pain, low-grade fever and stomach pain. Two to six percent of adults progress to a chronic infection, while 90% of infants become chronically ill. A vaccine is available for those at risk.","definition_xrefs":["NCIT:C157781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis B virus infection","termid":"MONDO:0005344"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"acute hepatitis B virus infection","synonyms":[{"name":"acute hepatitis B","type":"exact"}],"termid":"MONDO:0100370","xrefs":{"Monarch":{"xref_id":"0100370"}}}


id: GO:0003268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands contributing to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete fibroblast growth factor receptor signaling pathway involved in regulation of secondary heart field cardioblast proliferation (obsolete GO:0003268)","synonyms":[{"name":"fibroblast growth factor receptor signaling pathway involved in regulation of second heart field cardioblast cell proliferation","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in regulation of secondary heart field cardioblast cell proliferation","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in regulation of secondary heart field cardioblast cell proliferation","type":"exact"}],"termid":"GO:0003268"}


id: PBO:0005347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cleavage site","termid":"PBO:0005347"}


id: PR:Q9P7R8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gea1 gene.","definition_xrefs":["UniProtKB:Q9P7R8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C211.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.03c","synonyms":[{"name":"Spom972h-gea1","type":"exact"}],"termid":"PR:Q9P7R8"}


id: PBO:0054643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2048","termid":"PBO:0054643"}


id: MOD:00229
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to form alpha-1-microglobulin-Ig alpha complex chromophore.","definition_xrefs":["PubMed:11058759","PubMed:7506257","PubMed:7535251","PubMed:11877257","RESID:AA0224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"alpha-1-microglobulin-Ig alpha complex chromophore","synonyms":[{"name":"BINDING Multimeric 3-hydroxykynurenine chromophore (covalent)","type":"exact"},{"name":"alpha-1-microglobulin-Ig alpha complex chromophore","type":"exact"}],"termid":"MOD:00229"}


id: PBO:0036258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pex12 involved in peroxisome organization and biogenesis (predicted)","termid":"PBO:0036258"}


id: FYPO:0005972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of proton export is decreased during a cellular response to glucose stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased proton export during cellular response to glucose stimulus","synonyms":[{"name":"decreased H+ ion export during cellular response to glucose stimulus","type":"related"},{"name":"decreased hydrogen ion export during cellular response to glucose stimulus","type":"exact"},{"name":"decreased proton export across plasma membrane during cellular response to glucose stimulus","type":"exact"},{"name":"decreased proton export during cellular response to glucose stimulus during mitotic cell cycle","type":"related"},{"name":"decreased proton export from cell during cellular response to glucose stimulus","type":"exact"},{"name":"reduced proton export during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0005972"}


id: GO:0032547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a purine deoxyribonucleoside, a compound consisting of a purine base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside binding","termid":"GO:0001883"},{"relation_name":"is_a","term_name":"deoxyribonucleoside binding","termid":"GO:0032546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"purine deoxyribonucleoside binding","termid":"GO:0032547"}


id: MONDO:0100503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder in which the cause of the disease is a mutation in the DPH5 gene, which is characterized by craniofacial dysmorphology, profound neurodevelopmental delay, multisystem abnormalities, and miscarriages.","definition_xrefs":["PMID:35482014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"DPH5-related diphthamide-deficiency syndrome","termid":"MONDO:0100503","xrefs":{"Monarch":{"xref_id":"0100503"}}}


id: PBO:0059823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 3","termid":"PBO:0059823"}


id: GO:1903651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cytoplasmic transport.","definition_xrefs":["PMID:25049409","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytoplasmic transport (obsolete GO:1903651)","synonyms":[{"name":"activation of cytoplasmic streaming","type":"narrow"},{"name":"activation of cytoplasmic transport","type":"narrow"},{"name":"positive regulation of cytoplasmic streaming","type":"narrow"},{"name":"up regulation of cytoplasmic streaming","type":"narrow"},{"name":"up regulation of cytoplasmic transport","type":"exact"},{"name":"up-regulation of cytoplasmic streaming","type":"narrow"},{"name":"up-regulation of cytoplasmic transport","type":"exact"},{"name":"upregulation of cytoplasmic streaming","type":"narrow"},{"name":"upregulation of cytoplasmic transport","type":"exact"}],"termid":"GO:1903651"}


id: MONDO:0006540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A recurrent eczematous reaction characterized by the development of vesicular eruptions on the palms and soles, particularly along the sides and between the digits. It is accompanied by pruritus, a burning sensation, and hyperhidrosis. The disease is self-limiting, lasting only a few weeks. (Dorland, 27th ed)","definition_xrefs":["MESH:D011146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland disorder","termid":"MONDO:0006615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyshidrosis","secondary_identifiers":["MEDGEN:10851","UMLS:C0032633","Wikipedia:Dyshidrosis","EFO:1000688","DOID:9230","ICD9:692.9","ICD9:705.81","SCTID:402567004"],"synonyms":[{"name":"DYSHYDROTIC eczema","type":"exact"},{"name":"cheiropompholyx","type":"exact"},{"name":"dyshidrosis","type":"exact"},{"name":"pompholyx","type":"related"},{"name":"vesicular eczema of hands and/or feet","type":"exact"}],"termid":"MONDO:0006540","xrefs":{"Monarch":{"xref_id":"0006540"}}}


id: PR:Q9P7I8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.18 gene.","definition_xrefs":["UniProtKB:Q9P7I8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0390 protein C24B10.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.18","synonyms":[{"name":"Spom972h-SPCC24B10.18","type":"exact"}],"termid":"PR:Q9P7I8"}


id: GO:0060353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion molecule production","termid":"GO:0060353"}


id: PBO:0066595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member J","termid":"PBO:0066595"}


id: PBO:0027579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_transposon-derived_cDNA_in_cell","termid":"PBO:0027579"}


id: MONDO:0021634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A epithelial neoplasm that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epithelial skin neoplasm","secondary_identifiers":["UMLS:C0345976","MEDGEN:91063","NCIT:C7342"],"synonyms":[{"name":"epithelial skin neoplasm","type":"exact"},{"name":"epithelial skin tumor","type":"exact"},{"name":"epithelial skin tumour","type":"exact"},{"name":"skin epithelium neoplasm","type":"exact"},{"name":"skin epithelium tumor","type":"exact"},{"name":"skin epithelium tumour","type":"exact"},{"name":"zone of skin epithelial neoplasm","type":"exact"}],"termid":"MONDO:0021634","xrefs":{"Monarch":{"xref_id":"0021634"}}}


id: PBO:0058998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA decarboxylase","termid":"PBO:0058998"}


id: PBO:0000573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup45","termid":"PBO:0000573"}


id: GO:0004749
data:
  {"annotated_genes":["SJAG_04970","SJAG_03811","SJAG_04882"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63337,72208,73495],"is_not":false,"summary":null,"term":"GO:0004749"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + AMP + 2 H+.","definition_xrefs":["RHEA:15609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null,"SJAG_04970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ribose phosphate diphosphokinase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PRPPSYN-RXN","KEGG_REACTION:R01049","Reactome:R-HSA-111215","EC:2.7.6.1","Reactome:R-HSA-73580"],"synonyms":[{"name":"5-phosphoribose pyrophosphorylase activity","type":"related"},{"name":"5-phosphoribosyl-1-pyrophosphate synthetase activity","type":"related"},{"name":"5-phosphoribosyl-alpha-1-pyrophosphate synthetase activity","type":"related"},{"name":"ATP:D-ribose-5-phosphate diphosphotransferase activity","type":"related"},{"name":"PP-ribose P synthetase activity","type":"related"},{"name":"PPRibP synthetase activity","type":"related"},{"name":"PRPP synthetase activity","type":"related"},{"name":"phosphoribosyl diphosphate synthetase activity","type":"related"},{"name":"phosphoribosyl pyrophosphate synthetase activity","type":"related"},{"name":"phosphoribosyl-diphosphate synthetase activity","type":"related"},{"name":"phosphoribosylpyrophosphate synthase activity","type":"related"},{"name":"phosphoribosylpyrophosphate synthetase activity","type":"related"},{"name":"pyrophosphoribosylphosphate synthetase activity","type":"related"},{"name":"ribophosphate pyrophosphokinase activity","type":"related"},{"name":"ribose-5-phosphate pyrophosphokinase activity","type":"related"},{"name":"ribose-phosphate diphosphokinase activity","type":"related"},{"name":"ribose-phosphate pyrophosphokinase activity","type":"exact"}],"termid":"GO:0004749","terms_by_termid":{"GO:0004749":null}}


id: PBO:0069462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 727, pseudogene","termid":"PBO:0069462"}


id: GO:0018151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a protein cross-link.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-histidyl-L-tyrosine (obsolete GO:0018151)","termid":"GO:0018151"}


id: MONDO:0020971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the urethra secondary to infection with Neisseria gonorrhoeae; this infection is spread through sexual contact.","definition_xrefs":["NCIT:C26787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"urethritis","termid":"MONDO:0005297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal urethritis","secondary_identifiers":["MEDGEN:42278","icd11.foundation:684710834","SCTID:236682002","UMLS:C0018078"],"synonyms":[{"name":"Gonococcal urethritis","type":"related"},{"name":"gc urethritis","type":"exact"},{"name":"gonococcal urethritis","type":"exact"}],"termid":"MONDO:0020971","xrefs":{"Monarch":{"xref_id":"0020971"}}}


id: GO:0002756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A toll-like receptor signaling pathway not relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:12524386","PMID:12855817","PMID:15728447","PMID:12467241","PMID:15585605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"MyD88-independent toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-166166","Reactome:R-HSA-168927"],"synonyms":[{"name":"MyD88-independent TLR signaling pathway","type":"exact"},{"name":"MyD88-independent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002756"}


id: PBO:0004332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIB complex subunit Brf1","termid":"PBO:0004332"}


id: PR:Q1MTR2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein with serine-rich domain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15481:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein with serine-rich domain 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.14c","secondary_identifiers":["UniProtKB:Q1MTR2"],"synonyms":[{"name":"Spom972h-RNPS1","type":"exact"}],"termid":"PR:Q1MTR2"}


id: PBO:0055419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2849","termid":"PBO:0055419"}


id: PBO:0090192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER ubiquitin family protein","termid":"PBO:0090192"}


id: GO:0098811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II activating transcription factor and also with the RNA polymerase II basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription.","definition_xrefs":["GOC:txnOH","GOC:dos","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional repressor activity, RNA polymerase II activating transcription factor binding (obsolete GO:0098811)","synonyms":[{"name":"RNA polymerase II activating transcription factor binding transcription factor activity involved in negative regulation of transcription","type":"exact"},{"name":"RNA polymerase II activating transcription factor binding transcription repressor activity","type":"exact"},{"name":"RNA polymerase II transcription repressor activity","type":"broad"}],"termid":"GO:0098811"}


id: PBO:0075984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staufen double-stranded RNA binding protein 1","termid":"PBO:0075984"}


id: GO:0019144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-sugar + H2O = AMP + sugar 1-phosphate.","definition_xrefs":["EC:3.6.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-sugar diphosphatase activity","secondary_identifiers":["MetaCyc:ADPSUGPPHOSPHAT-RXN"],"synonyms":[{"name":"ADP-sugar pyrophosphatase activity","type":"related"},{"name":"ADP-sugar sugarphosphohydrolase activity","type":"related"},{"name":"ADPsugar pyrophosphatase activity","type":"related"},{"name":"adenosine diphosphosugar pyrophosphatase activity","type":"related"},{"name":"nucleoside diphosphate-sugar hydrolase activity","type":"broad"}],"termid":"GO:0019144"}


id: PBO:0116394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular thiamine-repressible acid phosphatase Pho4","termid":"PBO:0116394"}


id: SO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is di-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_dimethylation_site","synonyms":[{"name":"H3K79 di-methylation site","type":"exact"},{"name":"H3K79Me2","type":"related"}],"termid":"SO:0001711"}


id: PBO:0041368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 46","termid":"PBO:0041368"}


id: PBO:0005082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gma12","termid":"PBO:0005082"}


id: GO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gene conversion process in which a segment of about 50-200 base pairs is transferred from the donor to the acceptor.","definition_xrefs":["PMID:16954385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"short tract gene conversion","termid":"GO:0035823"}


id: GO:0071390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ecdysone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ecdysone","termid":"GO:0035075"},{"relation_name":"is_a","term_name":"cellular response to sterol","termid":"GO:0036315"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ecdysone","termid":"GO:0071390"}


id: GO:0015050
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses methane monooxygenase activity; dimeric and trimeric complexes have been characterized.","definition_xrefs":["PMID:15544","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methane monooxygenase complex","termid":"GO:0015050"}


id: FYPO:0002632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which dTTP biosynthesis is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal dTTP biosynthetic process","termid":"FYPO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased dTTP biosynthetic process","synonyms":[{"name":"decreased dTTP biosynthesis","type":"exact"},{"name":"decreased dTTP biosynthetic process during mitotic cell cycle","type":"related"},{"name":"decreased dTTP biosynthetic process during vegetative growth","type":"exact"},{"name":"reduced dTTP biosynthetic process","type":"exact"}],"termid":"FYPO:0002632"}


id: GO:0021739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesencephalic trigeminal nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesencephalic trigeminal nucleus development","termid":"GO:0021739"}


id: MONDO:0002986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuromuscular disease (obsolete MONDO:0002986)","termid":"MONDO:0002986","xrefs":{"Monarch":{"xref_id":"0002986"}}}


id: PBO:0036075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036075"}


id: GO:0034163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 9 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 9 signaling pathway","termid":"GO:0034162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 9 signaling pathway","synonyms":[{"name":"regulation of TLR9 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 9 signalling pathway","type":"exact"}],"termid":"GO:0034163"}


id: PR:O74908
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-splicing endonuclease subunit Sen54 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21027:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit sen54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.09","secondary_identifiers":["UniProtKB:O74908"],"synonyms":[{"name":"SPCC613.09","type":"related"},{"name":"Spom972h-TSEN54","type":"exact"},{"name":"tRNA-intron endonuclease sen54 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74908"}


id: GO:0070277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways by which iodide is converted to diiodine, with the concomitant loss of electrons.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete iodide oxidation (obsolete GO:0070277)","termid":"GO:0070277"}


id: PBO:0027534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ATP-dependent_5'-3'_DNA_helicase_activity","termid":"PBO:0027534"}


id: FYECO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 28 days. This medium is then replaced with nitrogen containing minimal medium and cells are allowed to recover for 10-50 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"28 days nitrogen starvation followed by 10-50 hours recovery in minimal medium","termid":"FYECO:0000241"}


id: MONDO:0003892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of lung adenocarcinoma characterized by the presence of acinar structures composed of columnar or cuboidal cells. (NCI05)","definition_xrefs":["NCIT:C5649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acinar lung adenocarcinoma","secondary_identifiers":["UMLS:C1332137","MEDGEN:233130","DOID:6482"],"synonyms":[{"name":"acinar adenocarcinoma of lung","type":"exact"},{"name":"acinar adenocarcinoma of the lung","type":"exact"},{"name":"acinar lung adenocarcinoma","type":"exact"},{"name":"lung acinar adenocarcinoma","type":"related"}],"termid":"MONDO:0003892","xrefs":{"Monarch":{"xref_id":"0003892"}}}


id: PBO:0051168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-52 (pseudogene)","termid":"PBO:0051168"}


id: PBO:0079799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B10","termid":"PBO:0079799"}


id: GO:0045659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neutrophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte differentiation","termid":"GO:0030853"},{"relation_name":"is_a","term_name":"regulation of neutrophil differentiation","termid":"GO:0045658"},{"relation_name":"negatively_regulates","term_name":"neutrophil differentiation","termid":"GO:0030223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil differentiation","synonyms":[{"name":"down regulation of neutrophil differentiation","type":"exact"},{"name":"down-regulation of neutrophil differentiation","type":"exact"},{"name":"downregulation of neutrophil differentiation","type":"exact"},{"name":"inhibition of neutrophil differentiation","type":"narrow"}],"termid":"GO:0045659"}


id: PBO:0027663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_heterochromatin_maintenance","termid":"PBO:0027663"}


id: PBO:0057943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3667 host gene","termid":"PBO:0057943"}


id: PBO:0029400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleoplasm","termid":"PBO:0029400"}


id: PBO:0070189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 107 pseudogene","termid":"PBO:0070189"}


id: MONDO:0013494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete PSMNSW (obsolete MONDO:0013494)","termid":"MONDO:0013494","xrefs":{"Monarch":{"xref_id":"0013494"}}}


id: PBO:0029219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_punctate_nuclear_protein_localization","termid":"PBO:0029219"}


id: MOD:00383
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and a glycine residue to form 2-imino-glutamic acid 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0378","PubMed:11682051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-imino-glutamic acid 5-imidazolinone glycine","synonyms":[{"name":"2,N-didehydroglutamyl-5-imidazolinone glycine","type":"exact"},{"name":"2-(3-carboxy-1-iminopropyl)-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"},{"name":"2-imino-glutamyl-5-imidazolinone glycine","type":"exact"},{"name":"4-[1-(carboxymethyl)-5-oxo-4,5-dihydro-1H-imidazol-2-yl]-4-iminobutanoic acid","type":"exact"},{"name":"CROSSLNK 2-iminomethyl-5-imidazolinone (Glu-Gly)","type":"exact"},{"name":"[2-(3-carboxy-1-iminopropyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00383"}


id: GO:0031642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myelination","termid":"GO:0031641"},{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myelination","synonyms":[{"name":"down regulation of myelination","type":"exact"},{"name":"down-regulation of myelination","type":"exact"},{"name":"downregulation of myelination","type":"exact"},{"name":"inhibition of myelination","type":"narrow"}],"termid":"GO:0031642"}


id: PBO:0075897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 overlapping transcript 3","termid":"PBO:0075897"}


id: PBO:0043889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone receptor 1","termid":"PBO:0043889"}


id: GO:0009712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a compound containing a pyrocatechol (1,2-benzenediol) nucleus or substituent.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound metabolic process","synonyms":[{"name":"catechol metabolic process","type":"related"},{"name":"catechol metabolism","type":"related"}],"termid":"GO:0009712"}


id: MONDO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tularemia that involves the lymph node.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymph node disorder","termid":"MONDO:0004928"},{"relation_name":"is_a","term_name":"tularemia","termid":"MONDO:0018077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"glandular tularemia","secondary_identifiers":["DOID:0050382","SCTID:21857006","MEDGEN:546997","UMLS:C0275974"],"synonyms":[{"name":"lymph node tularemia","type":"exact"}],"termid":"MONDO:0000320","xrefs":{"Monarch":{"xref_id":"0000320"}}}


id: PBO:0034341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_quality","termid":"PBO:0034341"}


id: MONDO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart defects, multiple types","synonyms":[{"name":"CHTD","type":"related"}],"termid":"MONDO:0000119","xrefs":{"Monarch":{"xref_id":"0000119"}}}


id: PBO:0073152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog D, COPII coat complex component","termid":"PBO:0073152"}


id: PBO:0066003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GTPase activating protein catalytic subunit alpha 2","termid":"PBO:0066003"}


id: GO:0048251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching.","definition_xrefs":["PMID:10841810","GOC:jid","PMID:12615674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"elastic fiber assembly","synonyms":[{"name":"elastic fibre assembly","type":"exact"},{"name":"elastin fiber assembly","type":"exact"},{"name":"elastin fibre assembly","type":"exact"}],"termid":"GO:0048251"}


id: PBO:0051703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INPP5B antisense RNA 1","termid":"PBO:0051703"}


id: PBO:0083771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential NTPase required for small ribosome subunit synthesis; mediates processing of the 20S pre-rRNA at site D in the cytoplasm but associates only transiently with 43S preribosomes via Rps14p; complex with Rps14 is conserved between humans, yeast, and arches; may be the endonuclease for site D; depletion leads to accumulation of pre-40S ribosomes in 80S-like ribosomes; human TAF9 functionally complements the lethality of the null mutation","termid":"PBO:0083771"}


id: FYPO:0005641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which kinetochores become separated during the first meiotic nuclear division, and in which homologous chromosomes do not move towards the spindle poles at the same time during anaphase, but are eventually separated normally.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:21920317"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging chromosomes during meiosis I","termid":"FYPO:0004393"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I, normal chromosome segregation in meiosis I, and sister chromatid non-disjunction in meiosis II","termid":"FYPO:0005633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","synonyms":[{"name":"abnormal chromosome segregation during first meiotic nuclear division with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with precocious centromeric dissociation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome segregation","type":"related"},{"name":"abnormal chromosome segregation during meiosis I with split kinetochores, lagging chromosomes, and normal chromosome separation","type":"related"}],"termid":"FYPO:0005641"}


id: GO:0017164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nicotinic acetylcholine receptor-associated protein activity (obsolete GO:0017164)","synonyms":[{"name":"nicotinic acetylcholine receptor-associated protein activity","type":"exact"}],"termid":"GO:0017164"}


id: PBO:0066912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 213","termid":"PBO:0066912"}


id: GO:0042382
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Discrete subnuclear bodies in the interchromatin nucleoplasmic space, often located adjacent to nuclear specks. 10-20 paraspeckles are typically found in human cell nuclei.","definition_xrefs":["PMID:11790299","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"paraspeckles","secondary_identifiers":["Wikipedia:Paraspeckle"],"termid":"GO:0042382"}


id: GO:0005156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor inhibiting ligand activity (obsolete GO:0005156)","synonyms":[{"name":"EGF receptor inhibiting ligand activity","type":"exact"},{"name":"EGFR inhibiting ligand activity","type":"exact"},{"name":"epidermal growth factor receptor inhibiting ligand activity","type":"exact"}],"termid":"GO:0005156"}


id: PBO:0039903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 5","termid":"PBO:0039903"}


id: GO:1902833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation in dorsal spinal cord.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21730158","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation in dorsal spinal cord","termid":"GO:0021921"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"cell proliferation in dorsal spinal cord","termid":"GO:0010456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation in dorsal spinal cord","synonyms":[{"name":"activation of cell proliferation in dorsal spinal cord","type":"narrow"},{"name":"up regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"up-regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"upregulation of cell proliferation in dorsal spinal cord","type":"exact"}],"termid":"GO:1902833"}


id: GO:0033887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine 4-sulfate + H2O = 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine + H+ + sulfate.","definition_xrefs":["RHEA:11444","EC:3.1.6.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"chondro-4-sulfatase activity","secondary_identifiers":["MetaCyc:CHONDRO-4-SULFATASE-RXN","KEGG_REACTION:R03517"],"synonyms":[{"name":"4-deoxy-beta-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine-4-sulfate 4-sulfohydrolase activity","type":"related"}],"termid":"GO:0033887"}


id: PBO:0087271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase and subunit of TFIIK, a TFIIH subassembly; phosphorylates the C-terminal domain (CTD) of RNAPII (Ser5 and Ser7); facilitates recruitment of mRNA 5'-capping and polyadenylation factors to the RNAPII holoenzyme complex; minor role in RNAPII transcription; role in RNAPI transcription; regulates Atg1p kinase complex assembly during nitrogen starvation induced autophagy; associates with cyclin Ccl1p; relocalizes to the cytosol in response to hypoxia; ortholog of human CDK7","termid":"PBO:0087271"}


id: PBO:0026884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_nitrogen_starvation","termid":"PBO:0026884"}


id: SO:0001884
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_translocation","termid":"SO:0001881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_translocation","synonyms":[{"name":"regulatory region translocation","type":"exact"}],"termid":"SO:0001884"}


id: GO:0043531
data:
  {"annotated_genes":["SJAG_02564","SJAG_02598","SJAG_03660","SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69775,72422,88976,92620],"is_not":false,"summary":null,"term":"GO:0043531"}]},"cv_name":"molecular_function","definition":"Binding to ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_03660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ADP binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5'-diphosphate binding","type":"exact"},{"name":"adenosine diphosphate binding","type":"exact"}],"termid":"GO:0043531","terms_by_termid":{"GO:0043531":null}}


id: PBO:0082269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease of high capacity and low affinity; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes the human Rh factors; expression is under the nitrogen catabolite repression regulation ammonia permease activity regulated by TORC1 effectors, Npr1p and Par32p; MEP3 has a paralog, MEP1, that arose from the whole genome duplication","termid":"PBO:0082269"}


id: MONDO:0002809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing cystic epithelial neoplasm arising from the exocrine pancreas.","definition_xrefs":["NCIT:C4374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"pancreatic exocrine neoplasm","termid":"MONDO:0021076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic cystadenoma","secondary_identifiers":["UMLS:C0341486","SCTID:235967003","MEDGEN:90963","DOID:3918"],"synonyms":[{"name":"cystadenoma of pancreas","type":"exact"},{"name":"cystadenoma of the pancreas","type":"exact"},{"name":"exocrine pancreas cystadenoma","type":"exact"},{"name":"pancreatic cystadenoma","type":"exact"}],"termid":"MONDO:0002809","xrefs":{"Monarch":{"xref_id":"0002809"}}}


id: GO:0106145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes of the reaction: scopoletin + 2-oxoglutarate+O2=fraxetin +succinate+ CO2).","definition_xrefs":["PMID:29361149","PMID:29581584","GOC:lr","RHEA:57848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"scopoletin 8-hydroxylase activity","secondary_identifiers":["EC:1.14.11.60"],"termid":"GO:0106145"}


id: GO:0051826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synapse structural plasticity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of synapse structural plasticity","termid":"GO:0051823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synapse structural plasticity","synonyms":[{"name":"down regulation of synapse structural plasticity","type":"exact"},{"name":"down-regulation of synapse structural plasticity","type":"exact"},{"name":"downregulation of synapse structural plasticity","type":"exact"},{"name":"inhibition of synapse structural plasticity","type":"narrow"}],"termid":"GO:0051826"}


id: PATO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001204 not enlarged (obsolete PATO:0001204)","termid":"PATO:0001204"}


id: PR:Q9Y7S1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0321 protein C569.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.02c","synonyms":[{"name":"Spom972h-SPCC569.02c","type":"exact"}],"termid":"PR:Q9Y7S1"}


id: GO:0102223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 H+ + 15-cis-4,4'-diapophytoene + 4 FAD = 4,4'-diapolycopene + 4 FADH2. This reaction consists of four successive dehydrogenations that lead to the introduction of three double bonds into 4,4'-diapophytoene (dehydrosqualene), with 4,4'-diapophytofluene, 4,4'-diapo-zeta-carotene and 4,4'-diapolycopene as intermediates, and 4,4'-diapolycopene as the end product.","definition_xrefs":["PMID:8002598","RHEA:31391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor","termid":"GO:0052890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4,4'-diapophytoene desaturase (4,4'-diaponeurosporene-forming)","secondary_identifiers":["GO:0102225","GO:0102962","GO:0102961","EC:1.3.8.2","MetaCyc:RXN-12224"],"synonyms":[{"name":"4,4'-diapo-zeta-carotene desaturase activity","type":"narrow"},{"name":"4,4'-diaponeurosporene desaturase activity","type":"narrow"},{"name":"4,4'-diapophytoene desaturase activity","type":"broad"},{"name":"4,4'-diapophytofluene desaturase activity","type":"narrow"}],"termid":"GO:0102223"}


id: PBO:0049822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine decarboxylase","termid":"PBO:0049822"}


id: PBO:0080982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 17","termid":"PBO:0080982"}


id: GO:0050731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"},{"relation_name":"positively_regulates","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-tyrosine phosphorylation","synonyms":[{"name":"activation of peptidyl-tyrosine phosphorylation","type":"narrow"},{"name":"stimulation of peptidyl-tyrosine phosphorylation","type":"narrow"},{"name":"up regulation of peptidyl-tyrosine phosphorylation","type":"exact"},{"name":"up-regulation of peptidyl-tyrosine phosphorylation","type":"exact"},{"name":"upregulation of peptidyl-tyrosine phosphorylation","type":"exact"}],"termid":"GO:0050731"}


id: PBO:0057469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 587","termid":"PBO:0057469"}


id: PBO:0043053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 3","termid":"PBO:0043053"}


id: GO:0030677
data:
  {"annotated_genes":["SJAG_04916","SJAG_01623","SJAG_00306","SJAG_02547","SJAG_06613","SJAG_04582","SJAG_02553","SJAG_01369","SJAG_03234","SJAG_00955","SJAG_03796"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63500,70943,60485,71512,90848,99250,115046,118330,115134,71279,104311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005655"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that catalyzes cleavage of the leader sequence of precursor tRNAs (pre-tRNAs), generating the mature 5' end of tRNAs.","definition_xrefs":["PMID:12045094","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00955":null,"SJAG_01369":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ribonuclease P complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNase P complex","type":"exact"}],"termid":"GO:0030677","terms_by_termid":{"GO:0005655":null}}


id: GO:0005109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a frizzled (fz) receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"frizzled binding","secondary_identifiers":["GO:0005110"],"synonyms":[{"name":"frizzled ligand","type":"narrow"},{"name":"frizzled-2 binding","type":"narrow"},{"name":"frizzled-2 ligand","type":"narrow"},{"name":"fz binding","type":"exact"},{"name":"fz ligand","type":"narrow"},{"name":"fz2 binding","type":"narrow"},{"name":"fz2 ligand","type":"narrow"}],"termid":"GO:0005109"}


id: PBO:0082754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring, required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells; N-terminus interacts with phosphatidylinositol-4,5-bisphosphate; protein abundance increases under DNA damage stress","termid":"PBO:0082754"}


id: GO:0007484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the genitalia over time, from formation as part of the genital disc to the mature structure. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia development","termid":"GO:0048806"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived genitalia development","synonyms":[{"name":"genital development","type":"broad"}],"termid":"GO:0007484"}


id: MONDO:0021477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the sphenoid sinus.","definition_xrefs":["NCIT:C4422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"sphenoidal sinus neoplasm","termid":"MONDO:0004047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of sphenoidal sinus","secondary_identifiers":["UMLS:C0345678","MEDGEN:83387","SCTID:92404006","ICD9:212.0"],"synonyms":[{"name":"benign neoplasm of sphenoid sinus","type":"exact"},{"name":"benign neoplasm of the sphenoid sinus","type":"exact"},{"name":"benign neoplasm of the sphenoidal sinus","type":"exact"},{"name":"benign sphenoid sinus neoplasm","type":"exact"},{"name":"benign sphenoid sinus tumor","type":"exact"},{"name":"benign sphenoid sinus tumour","type":"exact"},{"name":"benign sphenoidal sinus neoplasm","type":"exact"},{"name":"benign sphenoidal sinus tumor","type":"exact"},{"name":"benign sphenoidal sinus tumour","type":"exact"},{"name":"benign tumor of sphenoid sinus","type":"exact"},{"name":"benign tumor of sphenoidal sinus","type":"exact"},{"name":"benign tumor of the sphenoid sinus","type":"exact"},{"name":"benign tumor of the sphenoidal sinus","type":"exact"},{"name":"benign tumour of sphenoid sinus","type":"exact"},{"name":"benign tumour of sphenoidal sinus","type":"exact"},{"name":"benign tumour of the sphenoid sinus","type":"exact"},{"name":"benign tumour of the sphenoidal sinus","type":"exact"},{"name":"sphenoidal sinus benign neoplasm","type":"exact"}],"termid":"MONDO:0021477","xrefs":{"Monarch":{"xref_id":"0021477"}}}


id: PBO:0025450
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNB2L1","termid":"PBO:0025450"}


id: PBO:0079058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 13-1","termid":"PBO:0079058"}


id: MONDO:0004084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uveal epithelioid cell melanoma (obsolete MONDO:0004084)","termid":"MONDO:0004084","xrefs":{"Monarch":{"xref_id":"0004084"}}}


id: SO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide region with either intra-genome or intracellular mobility, of varying length, which often carry the information necessary for transfer and recombination with the host genome.","definition_xrefs":["PMID:14681355"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"mobile","termid":"SO:0001234"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_genetic_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Mobile_genetic_element"],"synonyms":[{"name":"INSDC_feature:mobile_element","type":"exact"},{"name":"MGE","type":"exact"},{"name":"mobile genetic element","type":"exact"}],"termid":"SO:0001037"}


id: MONDO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infectious disease that results in infection located in eyes or located in upper respiratory tract of domestic rabbits, has material basis in Myxoma virus, which is transmitted by mosquitos, transmitted by biting flies or transmitted by direct contact. The infection has symptom conjunctivitis with a milky discharge from the inflamed eye and has symptom breathing difficulties.","definition_xrefs":["EFO:0007327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious myxomatosis","secondary_identifiers":["MESH:D009234"],"termid":"MONDO:0005811","xrefs":{"Monarch":{"xref_id":"0005811"}}}


id: PBO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus formation at heterochromatic regions, Swi5_dependent","termid":"PBO:0002148"}


id: PBO:0111798
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain","termid":"PBO:0111798"}


id: PBO:0057144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR222/221 cluster host gene","termid":"PBO:0057144"}


id: PBO:0083642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component; eisosomes are large immobile patch structures at the cell cortex associated with endocytosis; phosphorylated on Thr233 upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways; member of the BAR domain family","termid":"PBO:0083642"}


id: PBO:0067124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 169, pseudogene","termid":"PBO:0067124"}


id: MONDO:0022770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circumscribed cutaneous aplasia of the vertex","termid":"MONDO:0022770","xrefs":{"Monarch":{"xref_id":"0022770"}}}


id: FYPO:0006819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells elongate at a normal (i.e. indistinguishable from wild type) rate during the vegetative growth phase of the life cycle. Cell growth is the process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["PomBase:mah","GO:0016049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell growth","termid":"FYPO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal vegetative cell growth rate","termid":"FYPO:0006819"}


id: MONDO:0015886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of type 1 diabetes mellitus that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare diabetes mellitus type 1 (obsolete MONDO:0015886)","secondary_identifiers":["Orphanet:181371"],"synonyms":[{"name":"rare insulin-dependent diabetes mellitus","type":"exact"},{"name":"rare type 1 diabetes mellitus","type":"exact"}],"termid":"MONDO:0015886","xrefs":{"Monarch":{"xref_id":"0015886"}}}


id: PBO:0069646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 923, pseudogene","termid":"PBO:0069646"}


id: GO:0008543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to fibroblast growth factor stimulus","termid":"GO:0044344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-190236"],"synonyms":[{"name":"FGF receptor signaling pathway","type":"exact"},{"name":"FGF receptor signalling pathway","type":"exact"},{"name":"FGFR signaling pathway","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0008543"}


id: MONDO:0000737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete megalocornea (obsolete MONDO:0000737)","termid":"MONDO:0000737","xrefs":{"Monarch":{"xref_id":"0000737"}}}


id: PBO:0058024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3974","termid":"PBO:0058024"}


id: PBO:0056455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 1","termid":"PBO:0056455"}


id: PBO:0059222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 4, pseudogene","termid":"PBO:0059222"}


id: PBO:0036469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrof olatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase Ade9","termid":"PBO:0036469"}


id: PBO:0048885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 4","termid":"PBO:0048885"}


id: GO:1905401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activated CD4-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905399"},{"relation_name":"positively_regulates","term_name":"activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated CD4-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905401"}


id: MONDO:0023369
data:
  {"annotated_genes":["SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013378"}]},"cv_name":"mondo","definition":"A disease that involves the facial skeleton.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull disorder","termid":"MONDO:0024654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03843":null},"genotype_count":0,"is_obsolete":false,"name":"disorder of facial skeleton","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1290148","MEDGEN:712533"],"synonyms":[{"name":"disease of facial skeleton","type":"exact"},{"name":"disease or disorder of facial skeleton","type":"exact"},{"name":"disorder of facial skeleton","type":"exact"},{"name":"facial skeleton disease","type":"exact"},{"name":"facial skeleton disease or disorder","type":"exact"},{"name":"maxillo-facial disease","type":"exact"},{"name":"maxillofacial anomaly","type":"exact"}],"termid":"MONDO:0023369","terms_by_termid":{"MONDO:0013378":null},"xrefs":{"Monarch":{"xref_id":"0023369"}}}


id: MONDO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disorder characterized by a strong and persistent cross-gender identification (such as stating a desire to be the other sex or frequently passing as the other sex) coupled with persistent discomfort with his or her sex (manifested in adults, for example, as a preoccupation with altering primary and secondary sex characteristics through hormonal manipulation or surgery).","definition_xrefs":["NCIT:C94362"],"gene_count":0,"genotype_count":0,"name":"obsolete gender identity disorder (obsolete MONDO:0001500)","secondary_identifiers":["ICD9:302.85","SCTID:87991007","ICD9:302.6","EFO:0008587","ICD9:302.89","ICD9:302.8","DOID:1234"],"termid":"MONDO:0001500","xrefs":{"Monarch":{"xref_id":"0001500"}}}


id: GO:0051255
data:
  {"annotated_genes":["SJAG_01613","SJAG_04841","SJAG_04745","SJAG_01215","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98993,97044,76824,94534,108610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051256"}]},"cv_name":"biological_process","definition":"The cell cycle process in which aggregation, arrangement and bonding together of a set of components to form the spindle midzone. The spindle midzone is the area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PMID:15296749","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_01613":null,"SJAG_03073":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"spindle midzone assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spindle midzone biogenesis","type":"exact"},{"name":"spindle midzone biosynthesis","type":"exact"},{"name":"spindle midzone formation","type":"exact"}],"termid":"GO:0051255","terms_by_termid":{"GO:0051256":null}}


id: GO:0050255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribitol + NAD+ = D-ribulose + H+ + NADH.","definition_xrefs":["EC:1.1.1.56","RHEA:20053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribitol 2-dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RIBITOL-2-DEHYDROGENASE-RXN","KEGG_REACTION:R01895"],"synonyms":[{"name":"adonitol dehydrogenase activity","type":"related"},{"name":"ribitol dehydrogenase A (wild type)","type":"related"},{"name":"ribitol dehydrogenase B (mutant enzyme with different properties)","type":"related"},{"name":"ribitol dehydrogenase D (mutant enzyme with different properties)","type":"related"},{"name":"ribitol:NAD+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050255"}


id: PBO:0041639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 F","termid":"PBO:0041639"}


id: GO:0002754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand to an intracellular vesicle pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["GOC:ar","ISBN:0781735149","PMID:15199967","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endosomal pattern recognition receptor signaling pathway","synonyms":[{"name":"intracellular endosomal pattern recognition receptor signaling pathway","type":"exact"},{"name":"intracellular vesicle PAMP receptor signaling pathway","type":"related"},{"name":"intracellular vesicle PRR signaling pathway","type":"related"},{"name":"intracellular vesicle pathogen receptor signaling pathway","type":"related"},{"name":"intracellular vesicle pattern recognition receptor signaling pathway","type":"related"},{"name":"intracellular vesicle pattern recognition receptor signalling pathway","type":"related"}],"termid":"GO:0002754"}


id: GO:0000578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a pattern along a line or a point in an embryo.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic axis specification","synonyms":[{"name":"embryonic axis determination","type":"related"}],"termid":"GO:0000578"}


id: PBO:0110364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal polycystin 1 interacting protein","termid":"PBO:0110364"}


id: PBO:0062878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthodenticle homeobox 2","termid":"PBO:0062878"}


id: PBO:0066048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1 GTPase activating protein","termid":"PBO:0066048"}


id: PBO:0073078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal cell derived factor 2 like 1","termid":"PBO:0073078"}


id: PBO:0086402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative FAD transporter, similar to Flc1p and Flc2p; localized to the ER; FLC3 has a paralog, FLC1, that arose from the whole genome duplication","termid":"PBO:0086402"}


id: PBO:0031775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G1_to_G0_transition","termid":"PBO:0031775"}


id: PR:O60111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized aarF domain-containing protein kinase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 family protein MCP2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.02","secondary_identifiers":["UniProtKB:O60111"],"synonyms":[{"name":"Spom972h-ADCK1","type":"exact"}],"termid":"PR:O60111"}


id: FYECO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which NAD+ was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NAD+","termid":"FYECO:0000074"}


id: PBO:0010232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain containing protein required for Sre1 cleavage","termid":"PBO:0010232"}


id: MONDO:1011857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive cerebellar abiotrophy, non-human animal","secondary_identifiers":["OMIA:000826"],"termid":"MONDO:1011857","xrefs":{"Monarch":{"xref_id":"1011857"}}}


id: FYPO:0007009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which assembly of heterochromatin mediated by small RNA is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly by small RNA","termid":"FYPO:0000187"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0000641"],"is_obsolete":false,"name":"decreased heterochromatin assembly by small RNA","synonyms":[{"name":"decreased RNAi-mediated chromatin silencing","type":"exact"},{"name":"decreased chromatin silencing by small RNA","type":"exact"},{"name":"decreased heterochromatin assembly by small RNA during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin assembly by small RNA during vegetative growth","type":"exact"},{"name":"reduced heterochromatin assembly by small RNA","type":"exact"}],"termid":"FYPO:0007009"}


id: PBO:0047214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 222 member B","termid":"PBO:0047214"}


id: GO:0048156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tau protein. tau is a microtubule-associated protein, implicated in Alzheimer's disease, Down Syndrome and ALS.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008092","GO:0005515"],"is_obsolete":false,"name":"tau protein binding","termid":"GO:0048156"}


id: PBO:0084960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myo-inositol transporter; member of the sugar transporter superfamily; expressed constitutively; ITR2 has a paralog, ITR1, that arose from the whole genome duplication","termid":"PBO:0084960"}


id: PBO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDR kinase Sid2","termid":"PBO:0000216"}


id: PBO:0056265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 1","termid":"PBO:0056265"}


id: MONDO:0007852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Palmoplantar keratoderma-deafness syndrome is a keratinization disorder characterized by focal or diffuse palmoplantar keratoderma. A patchy distribution is observed with accentuation on the thenars, hypothenars and the arches of the feet. The disease becomes apparent in infancy and is associated with sensorineural hearing loss that shows a variable age of onset. Due to genetic and clinical similarities, it has been proposed that palmoplantar keratoderma-deafness syndrome, knuckle pads-leukonychia-sensorineural deafness-palmoplantar hyperkeratosis syndrome and keratoderma hereditarium mutilans may represent variants of one broad disorder of syndromic deafness with heterogeneous phenotype. The disease is transmitted in an autosomal dominant manner with incomplete penetrance.","definition_xrefs":["Orphanet:2202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma-deafness syndrome","secondary_identifiers":["GARD:3094","MESH:C536152","OMIM:148350","DOID:0111505","UMLS:C1835672","MEDGEN:332030"],"synonyms":[{"name":"PPK-deafness syndrome","type":"exact"},{"name":"diffuse palmoplantar keratoderma with deafness (subtype)","type":"related"},{"name":"focal palmoplantar keratoderma with sensorineural deafness (subtype)","type":"related"},{"name":"hereditary palmoplantar keratoderma with deafness (subtype)","type":"related"},{"name":"keratoderma palmoplantar deafness","type":"related"},{"name":"keratoderma palmoplantar, with deafness","type":"related"},{"name":"keratoderma, palmoplantar, with deafness","type":"related"},{"name":"palmoplantar hyperkeratosis-deafness syndrome","type":"exact"},{"name":"palmoplantar hyperkeratosis-hearing loss syndrome","type":"exact"},{"name":"palmoplantar keratoderma and sensorineural deafness","type":"related"},{"name":"palmoplantar keratoderma-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0007852","xrefs":{"Monarch":{"xref_id":"0007852"}}}


id: PBO:0076465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAM41 mitochondrial translocator assembly and maintenance homolog","termid":"PBO:0076465"}


id: PBO:0088752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex intermodule linker subunit Clr1","termid":"PBO:0088752"}


id: SO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence used experimentally to detect the presence or absence of a complementary nucleic acid.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"probe","secondary_identifiers":["http://en.wikipedia.org/wiki/Hybridization_probe"],"termid":"SO:0000051"}


id: PBO:0085277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal matrix-localized lipase; required for normal peroxisome morphology; contains a peroxisomal targeting signal type 1 (PTS1) and a lipase motif; peroxisomal import requires the PTS1 receptor, Pex5p and self-interaction; transcriptionally activated by Yrm1p along with genes involved in multidrug resistance; oleic acid inducible","termid":"PBO:0085277"}


id: PBO:0083359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene RPL13B/YMR142C","termid":"PBO:0083359"}


id: PBO:0029394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029394"}


id: PBO:0070252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 195 pseudogene","termid":"PBO:0070252"}


id: SO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Plastid LSU rRNA is an RNA component of the large subunit of plastid (such as chloroplast) ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_rRNA","termid":"SO:0002346"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_LSU_rRNA","synonyms":[{"name":"plastid LSU rRNA","type":"exact"},{"name":"plastid large subunit rRNA","type":"exact"}],"termid":"SO:0002348"}


id: GO:0015617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete pilin/fimbrilin exporter activity (obsolete GO:0015617)","synonyms":[{"name":"pilin/fimbrilin exporter activity","type":"exact"}],"termid":"GO:0015617"}


id: MOD:00859
data:
  {"annotated_genes":["SJAG_00827","SJAG_02902","SJAG_03632","SJAG_03524","SJAG_02980"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00793"},{"annotations":[80266,80375,80438,80494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"A protein modification that can be derived from different natural residues by different chemical processes.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00827":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null,"SJAG_03632":null},"genotype_count":0,"is_obsolete":false,"name":"modified residue that can arise from different natural residues","references_by_uniquename":{"PMID:36408920":null},"termid":"MOD:00859","terms_by_termid":{"MOD:00793":null,"MOD:01154":null}}


id: GO:0102186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-formyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NADH(2-) + O2 = 4alpha-carboxy,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NAD(1-) + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-formyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102186)","termid":"GO:0102186"}


id: GO:0016099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monoterpenoid compounds, terpenoids having a C10 skeleton.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoterpenoid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3041"],"synonyms":[{"name":"monoterpenoid anabolism","type":"exact"},{"name":"monoterpenoid biosynthesis","type":"exact"},{"name":"monoterpenoid formation","type":"exact"},{"name":"monoterpenoid synthesis","type":"exact"}],"termid":"GO:0016099"}


id: PBO:0057268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 493","termid":"PBO:0057268"}


id: GO:0097457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon of a hippocampal granule cell, including dentate gyrus granule cell and CA3 granule cell, characterized by expansions (mossy fiber expansions) giving the fibers a mossy appearance. These unmyelinated axons were first described by Ramon y Cajal.","definition_xrefs":["PMID:20554881","PMID:17765709","PMID:24336151","NIF_Subcellular:nlx_subcell_100312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber","termid":"GO:0097457"}


id: PBO:0034136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_2D_boundary","termid":"PBO:0034136"}


id: MONDO:0005090
data:
  {"annotated_genes":["SJAG_01466","SJAG_03712"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87111,87112],"is_not":false,"summary":null,"term":"MONDO:0005090"}]},"cv_name":"mondo","definition":"A major psychotic disorder characterized by abnormalities in the perception or expression of reality. It affects the cognitive and psychomotor functions. Common clinical signs and symptoms include delusions, hallucinations, disorganized thinking, and retreat from reality.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NIFSTD:birnlex_2104","ICD9:295.9","HP:0100753","MEDGEN:48574","NCIT:C3362","OMIM:181500","icd11.foundation:1683919430","ICD9:295","ICD9:295.8","ICD9:295.90","Orphanet:3140","SCTID:58214004","ICD9:295.85","DOID:5419","UMLS:C0036341","ICD9:295.80"],"synonyms":[{"name":"SCZD","type":"related"},{"name":"schizoaffective disorder","type":"related"},{"name":"schizophrenia","type":"exact"},{"name":"schizophrenia (disease)","type":"exact"},{"name":"schizophrenia 12","type":"broad"},{"name":"schizophrenia with or without an affective disorder","type":"related"},{"name":"schizophrenia, susceptibility to","type":"related"},{"name":"schizophrenia-1","type":"exact"}],"termid":"MONDO:0005090","terms_by_termid":{"MONDO:0005090":null},"xrefs":{"Monarch":{"xref_id":"0005090"}}}


id: GO:0042959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an alkanesulfonate from one side of a membrane to the other according to the reaction: ATP + H2O + alkanesulfonate(out) = ADP + phosphate + alkanesulfonate(in).","definition_xrefs":["PMID:10506196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"ATPase-coupled organic acid transmembrane transporter activity","termid":"GO:0033283"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type alkanesulfonate transporter transporter activity","synonyms":[{"name":"alkanesulfonate transmembrane transporter activity","type":"broad"},{"name":"alkanesulfonate transporter activity","type":"related"},{"name":"alkanesulphonate transporter activity","type":"exact"}],"termid":"GO:0042959"}


id: MONDO:0009815
data:
  {"annotated_genes":["SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86167],"is_not":false,"summary":null,"term":"MONDO:0009815"}]},"cv_name":"mondo","definition":"Any autosomal recessive malignant osteopetrosis in which the cause of the disease is a mutation in the TCIRG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive osteopetrosis 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2579","DOID:0110942","MEDGEN:376708","MESH:C564915","NCIT:C167215","OMIM:259700","UMLS:C1850127"],"synonyms":[{"name":"Albers-Schonberg disease, autosomal recessive","type":"related"},{"name":"OPTB1","type":"exact"},{"name":"TCIRG1 autosomal recessive malignant osteopetrosis","type":"exact"},{"name":"TCIRG1 autosomal recessive osteopetrosis","type":"exact"},{"name":"autosomal recessive Albers-Schonberg disease","type":"exact"},{"name":"autosomal recessive malignant osteopetrosis caused by mutation in TCIRG1","type":"exact"},{"name":"autosomal recessive osteopetrosis 1","type":"exact"},{"name":"autosomal recessive osteopetrosis caused by mutation in TCIRG1","type":"exact"},{"name":"autosomal recessive osteopetrosis type 1","type":"exact"},{"name":"infantile malignant osteopetrosis 1","type":"exact"},{"name":"marble bones autosomal recessive","type":"related"},{"name":"marble bones, autosomal recessive","type":"related"},{"name":"osteopetrosis autosomal recessive 1","type":"related"},{"name":"osteopetrosis infantile malignant 1","type":"related"},{"name":"osteopetrosis, autosomal recessive 1","type":"related"},{"name":"osteopetrosis, autosomal recessive type 1","type":"exact"},{"name":"osteopetrosis, infantile malignant 1","type":"related"}],"termid":"MONDO:0009815","terms_by_termid":{"MONDO:0009815":null},"xrefs":{"Monarch":{"xref_id":"0009815"}}}


id: PR:Q09893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.05 gene.","definition_xrefs":["UniProtKB:Q09893","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.05","synonyms":[{"name":"Spom972h-SPAC24B11.05","type":"exact"}],"termid":"PR:Q09893"}


id: PBO:0075934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST20 antisense RNA 1","termid":"PBO:0075934"}


id: GO:1904441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thyroid gland epithelial cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17646383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"thyroid gland epithelial cell proliferation","termid":"GO:1990789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid gland epithelial cell proliferation","synonyms":[{"name":"regulation of Hurthle cell proliferation","type":"narrow"},{"name":"regulation of thyroid follicular cell proliferation","type":"narrow"}],"termid":"GO:1904441"}


id: GO:0015276
data:
  {"annotated_genes":["SJAG_02322","SJAG_03895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79608,72816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ligand-gated monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-451311","Reactome:R-HSA-622325","Reactome:R-HSA-622326","Reactome:R-HSA-451310","Reactome:R-HSA-629595"],"synonyms":[{"name":"ionotropic receptor activity","type":"narrow"},{"name":"ligand-gated ion channel activity","type":"broad"}],"termid":"GO:0015276","terms_by_termid":{"GO:0005227":null}}


id: PBO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CCDC82 ortholog","termid":"PBO:0036279"}


id: PBO:0069273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 529, pseudogene","termid":"PBO:0069273"}


id: GO:0048631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle growth.","definition_xrefs":["GOC:lm","PMID:15726494","PMID:15907921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"}


id: PBO:0069254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 509, pseudogene","termid":"PBO:0069254"}


id: GO:0070396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipoteichoic acid, which is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid catabolic process","termid":"GO:0070393"},{"relation_name":"is_a","term_name":"lipoteichoic acid metabolic process","termid":"GO:0070394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoteichoic acid catabolic process","synonyms":[{"name":"lipoteichoic acid breakdown","type":"exact"},{"name":"lipoteichoic acid catabolism","type":"exact"},{"name":"lipoteichoic acid degradation","type":"exact"}],"termid":"GO:0070396"}


id: GO:0006049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-N-acetylglucosamine metabolic process","termid":"GO:0006047"},{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine catabolic process","synonyms":[{"name":"UDP-N-acetylglucosamine breakdown","type":"exact"},{"name":"UDP-N-acetylglucosamine catabolism","type":"exact"},{"name":"UDP-N-acetylglucosamine degradation","type":"exact"}],"termid":"GO:0006049"}


id: GO:0030880
data:
  {"annotated_genes":["SJAG_04994","SJAG_03118","SJAG_02541","SJAG_03468","SJAG_03921","SJAG_00758","SJAG_01151","SJAG_00731","SJAG_03289","SJAG_03578","SJAG_02627","SJAG_00458","SJAG_00872","SJAG_00741","SJAG_02600","SJAG_00421","SJAG_02172","SJAG_04917","SJAG_01313","SJAG_02458","SJAG_00901","SJAG_00139","SJAG_00150","SJAG_04654","SJAG_00619","SJAG_00735","SJAG_00584","SJAG_03356","SJAG_00095","SJAG_04261","SJAG_04408","SJAG_03035","SJAG_04614","SJAG_01765","SJAG_03761","SJAG_01710","SJAG_04368","SJAG_02506","SJAG_02070","SJAG_02174","SJAG_03285","SJAG_04852","SJAG_00995","SJAG_03618","SJAG_02101","SJAG_01808","SJAG_01475","SJAG_00116","SJAG_03206","SJAG_05239","SJAG_00119","SJAG_00512","SJAG_03193","SJAG_02725","SJAG_02653","SJAG_03900","SJAG_01444","SJAG_00637","SJAG_04933","SJAG_04977","SJAG_03144","SJAG_04274","SJAG_03956","SJAG_02871","SJAG_03107","SJAG_01948","SJAG_04030","SJAG_04894","SJAG_01562","SJAG_04161","SJAG_04106","SJAG_04559","SJAG_03181","SJAG_01610","SJAG_01698","SJAG_01713","SJAG_01436","SJAG_04934","SJAG_01128","SJAG_00159","SJAG_04420","SJAG_01207","SJAG_03014"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74677,75007,72672,70167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005658"},{"annotations":[66750,76185,72277,70749,78437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016593"},{"annotations":[77243,87173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034245"},{"annotations":[69802,71728,117719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031380"},{"annotations":[74064,113256,76784,75606,75555,76285,90140,70858,115264,69889,113255,75435,74356,77159,102286,74902,113956,104643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005736"},{"annotations":[76283,77772,78627,112592,74900,75433,70538,72583,72998,74157,76782,70856,75193],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005665"},{"annotations":[76513,79379,76783,76284,69888,116505,70857,92789,74063,63013,73079,74666,70882,74901,75434,79584,71124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005666"},{"annotations":[71921,78448],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005672"},{"annotations":[117308,76499,71054,70506,80000,67792,75248,59365,69681,58057,74215,76649,73418,95331,103366,74847],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005669"},{"annotations":[69773,76039],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005673"},{"annotations":[79006,69682,80175],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005674"},{"annotations":[91936,69815,70108,76042,74131,78401,114572,108733],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005675"},{"annotations":[60760,76125,111828],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":83,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00421":null,"SJAG_00458":null,"SJAG_00512":null,"SJAG_00584":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00758":null,"SJAG_00872":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01128":null,"SJAG_01151":null,"SJAG_01207":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_01444":null,"SJAG_01475":null,"SJAG_01562":null,"SJAG_01610":null,"SJAG_01698":null,"SJAG_01710":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01808":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02172":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02506":null,"SJAG_02541":null,"SJAG_02600":null,"SJAG_02627":null,"SJAG_02653":null,"SJAG_02725":null,"SJAG_02871":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03107":null,"SJAG_03118":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03193":null,"SJAG_03206":null,"SJAG_03285":null,"SJAG_03289":null,"SJAG_03356":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03618":null,"SJAG_03761":null,"SJAG_03900":null,"SJAG_03921":null,"SJAG_03956":null,"SJAG_04030":null,"SJAG_04106":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04408":null,"SJAG_04420":null,"SJAG_04559":null,"SJAG_04614":null,"SJAG_04654":null,"SJAG_04852":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04933":null,"SJAG_04934":null,"SJAG_04977":null,"SJAG_04994":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"multisubunit RNA polymerase","type":"exact"}],"termid":"GO:0030880","terms_by_termid":{"GO:0005658":null,"GO:0005665":null,"GO:0005666":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0005736":null,"GO:0016593":null,"GO:0031380":null,"GO:0034245":null,"GO:0070985":null}}


id: MONDO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inborn vitamin B12 deficiency (obsolete MONDO:0000424)","termid":"MONDO:0000424","xrefs":{"Monarch":{"xref_id":"0000424"}}}


id: PBO:0052034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional sarcoplasmic reticulum protein 1","termid":"PBO:0052034"}


id: MONDO:0009535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphedema, congenital recessive (obsolete MONDO:0009535)","secondary_identifiers":["OMIM:247440","MESH:C565432"],"synonyms":[{"name":"lymphedema, congenital recessive","type":"exact"}],"termid":"MONDO:0009535","xrefs":{"Monarch":{"xref_id":"0009535"}}}


id: PBO:0058354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4727","termid":"PBO:0058354"}


id: PBO:0050469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA distal transcript antisense RNA","termid":"PBO:0050469"}


id: PBO:0044048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSRP1 antisense RNA 1","termid":"PBO:0044048"}


id: PBO:0055014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2429","termid":"PBO:0055014"}


id: GO:0120030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency of cilium beating involved in ciliary motility.","definition_xrefs":["PMID:28035044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium beat frequency involved in ciliary motility","termid":"GO:0060296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium beat frequency involved in ciliary motility","termid":"GO:0120030"}


id: PBO:0075426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 16","termid":"PBO:0075426"}


id: MONDO:0800475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder caused by heterozygous variants in NACC1 and characterized by developmental delay, intellectual disability, epilepsy, cataracts, feeding difficulties, and recurring episodes of extreme irritability. Other phenotypes include hypotonia, delayed myelination, microcephaly, stereotypic hand movements, gastrointestinal tract issues, and sleeping problems.","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"NACC1-related neurodevelopmental disorder with epilepsy, cataracts and episodic irritability","synonyms":[{"name":"NACC1-related neurodevelopmental disorder with epilepsy, cataracts and episodic irritability","type":"exact"}],"termid":"MONDO:0800475","xrefs":{"Monarch":{"xref_id":"0800475"}}}


id: GO:0048506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a change in identity of a meristem at a characteristic predetermined time point.","definition_xrefs":["GOC:jid","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of meristem development","termid":"GO:0048509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of meristematic phase transition","termid":"GO:0048506"}


id: PBO:0091828
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Increased Maximal permissive temperature for Pim1","termid":"PBO:0091828"}


id: PATO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000325 bright (obsolete PATO:0000325)","termid":"PATO:0000325"}


id: PR:Q9P7Y4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12809:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.10c","secondary_identifiers":["UniProtKB:Q9P7Y4"],"synonyms":[{"name":"SPBC1A4.10c","type":"related"},{"name":"Spom972h-MED14","type":"exact"},{"name":"mediator complex subunit 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator of RNA polymerase II complex subunit pmc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pmc1","type":"related"}],"termid":"PR:Q9P7Y4"}


id: MONDO:0020592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the pharynx. Representative examples include pharyngitis and carcinoma.","definition_xrefs":["NCIT:C26850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of pharynx","secondary_identifiers":["MEDGEN:10691","SCTID:75860007","UMLS:C0031345"],"synonyms":[{"name":"chordate pharynx disease","type":"exact"},{"name":"chordate pharynx disease or disorder","type":"exact"},{"name":"disease of chordate pharynx","type":"exact"},{"name":"disease or disorder of chordate pharynx","type":"exact"},{"name":"disorder of chordate pharynx","type":"exact"},{"name":"pharyngeal disease","type":"exact"},{"name":"pharyngeal disorder","type":"exact"}],"termid":"MONDO:0020592","xrefs":{"Monarch":{"xref_id":"0020592"}}}


id: MONDO:0004805
data:
  {"annotated_genes":["SJAG_01759","SJAG_02453","SJAG_00739","SJAG_01732","SJAG_03889","SJAG_04810","SJAG_02208","SJAG_03089","SJAG_04743","SJAG_02527","SJAG_01798","SJAG_02330","SJAG_02528","SJAG_03684","SJAG_01960","SJAG_00222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030519"},{"annotations":[84808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[85837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"},{"annotations":[85753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[84844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011971"},{"annotations":[85871,85870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958013"},{"annotations":[85388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"},{"annotations":[86008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[85867,85868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[86461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[86002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008214"},{"annotations":[87098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"},{"annotations":[86555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[85478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012559"},{"annotations":[86485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"},{"annotations":[86400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","definition":"A disease involving leukocytes.","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00739":null,"SJAG_01732":null,"SJAG_01759":null,"SJAG_01798":null,"SJAG_01960":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_02527":null,"SJAG_02528":null,"SJAG_03089":null,"SJAG_03684":null,"SJAG_03889":null,"SJAG_04743":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"leukocyte disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D007960","SCTID:54097007","UMLS:C0023510","DOID:9500","ICD9:288","MEDGEN:7325","ICD9:288.9"],"synonyms":[{"name":"disease of leukocyte","type":"exact"},{"name":"disease or disorder of leukocyte","type":"exact"},{"name":"disorder of leukocyte","type":"exact"},{"name":"disorder, leukocyte","type":"exact"},{"name":"disorders, leukocyte","type":"exact"},{"name":"leukocyte disease","type":"exact"},{"name":"leukocyte disease or disorder","type":"exact"},{"name":"leukocyte disorder","type":"exact"},{"name":"white blood cell disorder","type":"exact"}],"termid":"MONDO:0004805","terms_by_termid":{"MONDO:0008214":null,"MONDO:0009693":null,"MONDO:0009953":null,"MONDO:0010294":null,"MONDO:0010600":null,"MONDO:0011405":null,"MONDO:0011971":null,"MONDO:0011997":null,"MONDO:0012559":null,"MONDO:0014118":null,"MONDO:0030519":null,"MONDO:0032899":null,"MONDO:0044208":null,"MONDO:0957809":null,"MONDO:0958013":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0004805"}}}


id: MONDO:0006227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the stomach. The vast majority of cases arise from the corpus-fundus region. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent. It may be associated with autoimmune chronic atrophic gastritis, multiple endocrine neoplasia type 1, or it may be sporadic.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neuroendocrine tumor G1","secondary_identifiers":["EFO:1000275","UMLS:C0349529","NCIT:C4635","MEDGEN:83885"],"synonyms":[{"name":"gastric ECL cell NET","type":"exact"},{"name":"gastric ECL cell NET G1","type":"exact"},{"name":"gastric ECL cell, histamine-producing NET","type":"exact"},{"name":"gastric ECL-cell carcinoid tumor","type":"exact"},{"name":"gastric ECL-cell carcinoid tumour","type":"exact"},{"name":"gastric NET G1","type":"exact"},{"name":"gastric carcinoid tumor","type":"exact"},{"name":"gastric carcinoid tumour","type":"exact"},{"name":"gastric enterochromaffin-like cell carcinoid tumor","type":"exact"},{"name":"gastric enterochromaffin-like cell carcinoid tumour","type":"exact"},{"name":"gastric enterochromaffin-like cell neuroendocrine tumor","type":"exact"},{"name":"gastric enterochromaffin-like cell neuroendocrine tumour","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of stomach","type":"exact"},{"name":"stomach NET G1","type":"exact"},{"name":"stomach carcinoid tumor","type":"exact"},{"name":"stomach carcinoid tumour","type":"exact"},{"name":"stomach neuroendocrine neoplasm G1","type":"exact"},{"name":"stomach neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0006227","xrefs":{"Monarch":{"xref_id":"0006227"}}}


id: PBO:0059900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 23","termid":"PBO:0059900"}


id: PBO:0000797
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from map position, met5","termid":"PBO:0000797"}


id: MONDO:0000283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hantavirus hemorrhagic fever with renal syndrome","termid":"MONDO:0005784"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Hantavirus hemorrhagic fever with renal syndrome, Seoul virus type","secondary_identifiers":["DOID:0050200"],"synonyms":[{"name":"Korean hemorrhagic fever","type":"related"}],"termid":"MONDO:0000283","xrefs":{"Monarch":{"xref_id":"0000283"}}}


id: SO:0000598
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000598 edited_by_C_insertion_and_dinucleotide_insertion (obsolete SO:0000598)","synonyms":[{"name":"transcript_edited_by_C-insertion_and_dinucleotide_insertion","type":"related"}],"termid":"SO:0000598"}


id: GO:0140991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cytoplasmic post-transcriptional gene silencing pathway in which piRNAs direct the cleavage of target mRNAs. The target mRNA, often transcribed from a transposable element, is destabilized by the activity of a PIWI class endonuclease within the piRNA-induced silencing complex. This may also be accompanied by mRNA deadenylation and decapping.","definition_xrefs":["PMID:29281264","PMID:33419460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"piRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0140991"}


id: GO:1905227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of adhesion of symbiont to host epithelial cell.","definition_xrefs":["GOC:TermGenie","PMID:15659068","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adhesion of symbiont to host epithelial cell (obsolete GO:1905227)","synonyms":[{"name":"down regulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"down-regulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"downregulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"inhibition of adhesion of symbiont to host epithelial cell","type":"narrow"}],"termid":"GO:1905227"}


id: PBO:0062976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPC5 antisense RNA 1","termid":"PBO:0062976"}


id: PBO:0046573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 15","termid":"PBO:0046573"}


id: MONDO:0004928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of the lymph nodes.","definition_xrefs":["NCIT:C35346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymph node disorder","secondary_identifiers":["DOID:9942","SCTID:76616003","MEDGEN:78802","UMLS:C0272394"],"synonyms":[{"name":"disease of lymph node","type":"exact"},{"name":"disease or disorder of lymph node","type":"exact"},{"name":"disorder of lymph node","type":"exact"},{"name":"lymph node disease","type":"exact"},{"name":"lymph node disease or disorder","type":"exact"},{"name":"lymph node disorder","type":"exact"}],"termid":"MONDO:0004928","xrefs":{"Monarch":{"xref_id":"0004928"}}}


id: GO:0097746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"regulation of tube diameter","termid":"GO:0035296"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel diameter maintenance","secondary_identifiers":["GO:0050880","GO:0042312"],"synonyms":[{"name":"blood vessel diameter homeostasis","type":"exact"},{"name":"regulation of blood vessel diameter","type":"exact"},{"name":"regulation of blood vessel size","type":"related"},{"name":"regulation of vasodilatation","type":"related"},{"name":"regulation of vasodilation","type":"related"}],"termid":"GO:0097746"}


id: GO:0042488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages that are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates.","definition_xrefs":["PMID:15355794","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of odontogenesis","termid":"GO:0042482"},{"relation_name":"is_a","term_name":"regulation of odontogenesis of dentin-containing tooth","termid":"GO:0042487"},{"relation_name":"positively_regulates","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of odontogenesis of dentin-containing tooth","synonyms":[{"name":"activation of odontogenesis","type":"broad"},{"name":"positive regulation of odontogenesis of dentine-containing teeth","type":"exact"},{"name":"positive regulation of odontogenesis of dentine-containing tooth","type":"related"},{"name":"stimulation of odontogenesis","type":"broad"},{"name":"up regulation of odontogenesis","type":"broad"},{"name":"up-regulation of odontogenesis","type":"broad"},{"name":"upregulation of odontogenesis","type":"broad"}],"termid":"GO:0042488"}


id: PR:Q4PIR3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q4PIR3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 SUMO-protein ligase nse2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.06c","synonyms":[{"name":"Spom972h-nse2","type":"exact"},{"name":"non-SMC element 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-structural maintenance of chromosomes element 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q4PIR3"}


id: MONDO:0004251
data:
  {"annotated_genes":["SJAG_03920","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86578,86579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the small intestine. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal neoplasm","termid":"MONDO:0021118"},{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestine neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0345832","SCTID:126832004","MEDGEN:91055","DOID:7505","NCIT:C4432"],"synonyms":[{"name":"neoplasm of small bowel","type":"exact"},{"name":"neoplasm of small intestine","type":"exact"},{"name":"neoplasm of the small bowel","type":"exact"},{"name":"neoplasm of the small intestine","type":"exact"},{"name":"small bowel neoplasm","type":"exact"},{"name":"small bowel tumor","type":"exact"},{"name":"small bowel tumour","type":"exact"},{"name":"small intestinal neoplasm","type":"exact"},{"name":"small intestine neoplasm","type":"exact"},{"name":"small intestine neoplasm (disease)","type":"exact"},{"name":"small intestine tumor","type":"exact"},{"name":"small intestine tumour","type":"exact"},{"name":"tumor of small bowel","type":"exact"},{"name":"tumor of small intestine","type":"exact"},{"name":"tumor of the small bowel","type":"exact"},{"name":"tumor of the small intestine","type":"exact"},{"name":"tumour of small bowel","type":"exact"},{"name":"tumour of small intestine","type":"exact"},{"name":"tumour of the small bowel","type":"exact"},{"name":"tumour of the small intestine","type":"exact"}],"termid":"MONDO:0004251","terms_by_termid":{"MONDO:0011719":null},"xrefs":{"Monarch":{"xref_id":"0004251"}}}


id: PBO:0082144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Sar1p GTPase activity; paralog of Sec23 but does not associate with the COPII components; not an essential gene","termid":"PBO:0082144"}


id: FYPO:0002602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation during mitotic S phase","synonyms":[{"name":"decreased histone H2A phosphorylation during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced histone H2A phosphorylation during mitotic S phase","type":"exact"}],"termid":"FYPO:0002602"}


id: PBO:0018015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex subunit Clr1","termid":"PBO:0018015"}


id: PBO:0046469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 3","termid":"PBO:0046469"}


id: GO:0034770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of one or more methyl groups to lysine at position 20 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 methylation (obsolete GO:0034770)","synonyms":[{"name":"histone H4 K20 methylation","type":"exact"},{"name":"histone H4K20me","type":"exact"},{"name":"histone lysine H4 K20 methylation","type":"exact"}],"termid":"GO:0034770"}


id: GO:0031251
data:
  {"annotated_genes":["SJAG_01910","SJAG_00966","SJAG_02808"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70114,77402,78752],"is_not":false,"summary":null,"term":"GO:0031251"}]},"cv_name":"cellular_component","definition":"A complex that possesses poly(A)-specific ribonuclease activity; catalyzes the message-specific shortening of mRNA poly(A) tails. Contains at least two subunits, known as Pan2p and Pan3p in Saccharomyces.","definition_xrefs":["PMID:9774670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00966":null,"SJAG_01910":null,"SJAG_02808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"PAN complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"poly(A) nuclease complex","type":"exact"}],"termid":"GO:0031251","terms_by_termid":{"GO:0031251":null}}


id: GO:0080094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose-6-phosphate stimulus.","definition_xrefs":["PMID:19193861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trehalose-6-phosphate","synonyms":[{"name":"response to trehalose-6-phosphate stimulus","type":"exact"}],"termid":"GO:0080094"}


id: GO:0004579
data:
  {"annotated_genes":["SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76100],"is_not":false,"summary":null,"term":"GO:0004579"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine.","definition_xrefs":["RHEA:22980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharyl transferase activity","termid":"GO:0004576"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide-protein glycotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.4.99.18","MetaCyc:RXN-16761","Reactome:R-HSA-9694793","Reactome:R-HSA-446209"],"synonyms":[{"name":"asparagine N-glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyl-diphosphooligosaccharide:protein-L-asparagine oligopolysaccharidotransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein glycosyltransferase activity","type":"exact"},{"name":"dolichyldiphosphooligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichyldiphosphoryloligosaccharide-protein oligosaccharyltransferase activity","type":"exact"},{"name":"dolichylpyrophosphodiacetylchitobiose-protein glycosyltransferase activity","type":"exact"},{"name":"oligomannosyltransferase activity","type":"related"}],"termid":"GO:0004579","terms_by_termid":{"GO:0004579":null}}


id: PBO:0113296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome-binding protein; interacts physically with multiple subunits of the 20S proteasome and genetically with genes encoding 20S core particle and 19S regulatory particle subunits; specifically blocks all three proteasome active sites; exhibits boundary activity which inhibits the propagation of heterochromatic silencing; contains a PI31 proteasome regulator domain and sequence similarity with human PSMF1, a proteasome inhibitor; not an essential gene","termid":"PBO:0113296"}


id: PBO:0003140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor IF-2Mt (predicted)","termid":"PBO:0003140"}


id: MONDO:0006252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infiltrating bladder lymphoepithelioma-like carcinoma (obsolete MONDO:0006252)","termid":"MONDO:0006252","xrefs":{"Monarch":{"xref_id":"0006252"}}}


id: FYPO:0005054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to latrunculin A is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to latrunculin A.","definition_xrefs":["PMID:15537703","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to latrunculin A","synonyms":[{"name":"normal cell cycle delay following latrunculin A exposure","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to LatA","type":"exact"},{"name":"normal cell cycle regulation during cellular response to latrunculin A during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to latrunculin A during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to latrunculin A","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to latrunculin A","type":"exact"}],"termid":"FYPO:0005054"}


id: PBO:0071289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 12","termid":"PBO:0071289"}


id: PBO:0108509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein Sym1, implicated in pyrimidine or lysine metabolism","termid":"PBO:0108509"}


id: GO:0046152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"},{"relation_name":"is_a","term_name":"ocellus pigment metabolic process","termid":"GO:0046158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ommochrome metabolic process","synonyms":[{"name":"ommochrome metabolism","type":"exact"}],"termid":"GO:0046152"}


id: PBO:0029794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actin_cable_retrograde_transport","termid":"PBO:0029794"}


id: PBO:0062649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 12 subfamily D member 3","termid":"PBO:0062649"}


id: PBO:0069580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 854, pseudogene","termid":"PBO:0069580"}


id: MONDO:0022968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dextrocardia with situs inversus is a condition that is characterized by abnormal positioning of the heart and other internal organs. In people affected by dextrocardia, the tip of the heart points towards the right side of the chest instead of the left side. Situs inversus refers to the mirror-image reversal of the organs in the chest and abdominal cavity. Some affected people have no obvious signs or symptoms. However, a small percentage of people also have congenital heart defects, usually transposition of the great vessels. Dextrocardia with situs inversus can also be associated with primary ciliary dyskinesia (also known as Kartagener syndrome). Treatment typically depends on the heart or physical problems the person may have in addition to dextrocardia with situs inversus.","definition_xrefs":["GARD:0006268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dextrocardia with situs inversus","secondary_identifiers":["UMLS:C1395317","MEDGEN:237234"],"synonyms":[{"name":"situs inversus totalis","type":"related"}],"termid":"MONDO:0022968","xrefs":{"Monarch":{"xref_id":"0022968"}}}


id: PBO:0043875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 3 like 3","termid":"PBO:0043875"}


id: MONDO:0012691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome with multiple lentigines in which the cause of the disease is a mutation in the RAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome with multiple lentigines","termid":"MONDO:0007893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267"],"is_obsolete":false,"name":"LEOPARD syndrome 2","secondary_identifiers":["MEDGEN:370588","UMLS:C1969056","GARD:15518","MESH:C537117","DOID:0080549","OMIM:611554"],"synonyms":[{"name":"LEOPARD syndrome 2","type":"exact"},{"name":"LPRD2","type":"related"},{"name":"Leopard syndrome type 2","type":"exact"},{"name":"leopard syndrome 2","type":"exact"}],"termid":"MONDO:0012691","xrefs":{"Monarch":{"xref_id":"0012691"}}}


id: PBO:0005595
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOrphology Defective","termid":"PBO:0005595"}


id: PBO:0084474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA1","termid":"PBO:0084474"}


id: PBO:0082757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate with other rods to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells","termid":"PBO:0082757"}


id: PBO:0013462
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses rad3delta or rad3-36 sensitivity to UV and hydroxyurea","termid":"PBO:0013462"}


id: MONDO:0017270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal ichthyosis syndrome (obsolete MONDO:0017270)","secondary_identifiers":["Orphanet:281217"],"termid":"MONDO:0017270","xrefs":{"Monarch":{"xref_id":"0017270"}}}


id: GO:1900480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of diacylglycerol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"regulates","term_name":"diacylglycerol biosynthetic process","termid":"GO:0006651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of diacylglycerol biosynthetic process","synonyms":[{"name":"regulation of diacylglycerol anabolism","type":"exact"},{"name":"regulation of diacylglycerol biosynthesis","type":"exact"},{"name":"regulation of diacylglycerol formation","type":"exact"},{"name":"regulation of diacylglycerol synthesis","type":"exact"}],"termid":"GO:1900480"}


id: MONDO:1011547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctionalis epidermolysis bullosa that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, cattle","termid":"MONDO:1010751"},{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa , non-human animal","termid":"MONDO:1011426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctionalis epidermolysis bullosa, cattle","secondary_identifiers":["OMIA:000342-9913"],"termid":"MONDO:1011547","xrefs":{"Monarch":{"xref_id":"1011547"}}}


id: GO:1900692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (+)-kotanin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"(+)-kotanin biosynthetic process","termid":"GO:1900596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of (+)-kotanin biosynthetic process","synonyms":[{"name":"regulation of (+)-kotanin anabolism","type":"exact"},{"name":"regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"regulation of (+)-kotanin formation","type":"exact"},{"name":"regulation of (+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900692"}


id: MONDO:0054666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 5","secondary_identifiers":["UMLS:C4540141","DOID:0080497","OMIM:617690","MEDGEN:1627972"],"synonyms":[{"name":"ODG5","type":"related"},{"name":"ovarian dysgenesis 5","type":"exact"}],"termid":"MONDO:0054666","xrefs":{"Monarch":{"xref_id":"0054666"}}}


id: PBO:0039363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-Mullerian hormone","termid":"PBO:0039363"}


id: MONDO:0022333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"5-nucleotidase syndrome","secondary_identifiers":["UMLS:C2930876","GARD:8242","MEDGEN:419653","MESH:C535321"],"synonyms":[{"name":"5'-Nucleotidase syndrome","type":"related"},{"name":"5'NT syndrome","type":"related"}],"termid":"MONDO:0022333","xrefs":{"Monarch":{"xref_id":"0022333"}}}


id: PBO:0063018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 associated glutamate rich protein 1","termid":"PBO:0063018"}


id: PBO:0072806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 3","termid":"PBO:0072806"}


id: MONDO:0043881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A poorly defined concept which at best is described as an extremely rare entity, possibly related to various subtypes of acute myeloid leukemia with abnormal eosinophils. (WHO, 2001)","definition_xrefs":["NCIT:C26813"],"gene_count":0,"genotype_count":0,"name":"obsolete acute eosinophilic leukemia (obsolete MONDO:0043881)","secondary_identifiers":["MESH:D015472","SCTID:277604002"],"synonyms":[{"name":"acute eosinophilic leukemia","type":"exact"},{"name":"acute eosinophilic leukemias","type":"related"},{"name":"eosinophilic leukemia, acute","type":"related"},{"name":"eosinophilic leukemias, acute","type":"related"},{"name":"leukemia, acute eosinophilic","type":"related"},{"name":"leukemias, acute eosinophilic","type":"related"}],"termid":"MONDO:0043881","xrefs":{"Monarch":{"xref_id":"0043881"}}}


id: PBO:0001433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S7 (predicted)","termid":"PBO:0001433"}


id: MONDO:0007114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of acromelic dysplasia characterized by the distinctive radiological sign of angel-shaped middle phalanges, a typical metacarpophalangeal pattern profile (mainly affecting first metacarpals and middle phalanges of second, third and fifth digits, which all appear short), epiphyseal changes in the hips and, in some, abnormal dentition and delayed bone age.","definition_xrefs":["Orphanet:63442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angel-shaped phalango-epiphyseal dysplasia","secondary_identifiers":["MedDRA:10066017","OMIM:105835","MEDGEN:366028","MESH:C536361","SCTID:720984008","icd11.foundation:1095628863","GARD:671","UMLS:C1739384"],"synonyms":[{"name":"ASPED","type":"exact"},{"name":"Angel shaped phalangoepiphyseal dysplasia","type":"related"},{"name":"Angel-shaped phalangoepiphyseal dysplasia","type":"related"}],"termid":"MONDO:0007114","xrefs":{"Monarch":{"xref_id":"0007114"}}}


id: PBO:0047782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D3","termid":"PBO:0047782"}


id: PBO:0073736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC1A3 antisense RNA 1","termid":"PBO:0073736"}


id: MOD:01575
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01575"}


id: PBO:0047485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 1 pseudogene 1","termid":"PBO:0047485"}


id: GO:0048193
data:
  {"annotated_genes":["SJAG_02482","SJAG_00557","SJAG_00072","SJAG_03838","SJAG_00826","SJAG_02419","SJAG_02453","SJAG_03499","SJAG_02912","SJAG_01508","SJAG_01940","SJAG_02839","SJAG_01598","SJAG_02264","SJAG_04739","SJAG_04956","SJAG_05344","SJAG_03142","SJAG_03746","SJAG_04219","SJAG_04112","SJAG_03663","SJAG_04909","SJAG_03938","SJAG_01324","SJAG_03558","SJAG_00785","SJAG_04966","SJAG_02539","SJAG_04513","SJAG_05013","SJAG_00330","SJAG_01025","SJAG_04528","SJAG_00357","SJAG_04592","SJAG_00380","SJAG_04044","SJAG_05209","SJAG_00578","SJAG_03670","SJAG_04340","SJAG_03756","SJAG_03754","SJAG_04023","SJAG_02753","SJAG_02204","SJAG_03889","SJAG_00484","SJAG_00171","SJAG_04931","SJAG_03347","SJAG_03054","SJAG_02586","SJAG_01279","SJAG_01166","SJAG_04618","SJAG_04338","SJAG_05345","SJAG_03268","SJAG_01409","SJAG_02811","SJAG_02316","SJAG_04615","SJAG_02655","SJAG_03270","SJAG_01516","SJAG_01071","SJAG_01633","SJAG_02587","SJAG_01945","SJAG_03158","SJAG_00092","SJAG_01114","SJAG_01003","SJAG_04609","SJAG_00767","SJAG_02012","SJAG_05030","SJAG_03552","SJAG_03864","SJAG_00858","SJAG_00108","SJAG_00332","SJAG_02240","SJAG_01642","SJAG_03153","SJAG_04837","SJAG_03842","SJAG_01488","SJAG_03907","SJAG_01927","SJAG_04196","SJAG_02282","SJAG_04358","SJAG_00804","SJAG_01809","SJAG_01645","SJAG_00041","SJAG_01991","SJAG_03963","SJAG_02750","SJAG_02234","SJAG_04434","SJAG_00430","SJAG_01415","SJAG_04402","SJAG_03933","SJAG_01027","SJAG_00144","SJAG_03970","SJAG_05326","SJAG_04002","SJAG_02349","SJAG_02160","SJAG_04740","SJAG_02120","SJAG_04569","SJAG_02320","SJAG_04419","SJAG_00669","SJAG_04701","SJAG_04938","SJAG_02211","SJAG_02418","SJAG_02177","SJAG_03244","SJAG_03072","SJAG_01899","SJAG_03005","SJAG_02824","SJAG_02640","SJAG_00899","SJAG_02525","SJAG_00916","SJAG_03810","SJAG_00906","SJAG_01335","SJAG_03848","SJAG_03726","SJAG_01459","SJAG_04598","SJAG_04391","SJAG_04902","SJAG_02103","SJAG_03137","SJAG_04474","SJAG_02443","SJAG_04070","SJAG_03467","SJAG_04021","SJAG_00192","SJAG_00314","SJAG_01600"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58125],"is_not":false,"summary":null,"term":"GO:0048193"},{"annotations":[71084,117485],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[72852],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090114"},{"annotations":[71204,75348,74584,76839,78171,76306,74938],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090110"},{"annotations":[71192,114965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034498"},{"annotations":[74691,95370,110591,70624,66418,78556,95809,74080,75031,97664,101934,118545,78642,71952,74478,78510,87993,73329,106170,70756,79073,118676,63827,116258,106881,104364,94786,100095,76858,78150,76036,71143,77814,74222,77436,112430,72010,70203,75368,100508,91872,73559,58020,72556,74862,98210,100836,110496,69639,79657,106586,73643,76751,93657,90930,116115,91294,78588,109246,114741,59211,97518,79327,92997,92910,112173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006888"},{"annotations":[118171,116708,99671,100011,79531,77406,73120,76686,77446,88910,61412,100069,112750,100875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006895"},{"annotations":[94906,106802,108551,109331,69854,77231,106171,112751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[92036,72409,99521,106053,75718,71731,100608,77169,70550,107139,57473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006893"},{"annotations":[75790,117294,96903,73121,69625,111247,77447,110015,96635,93948,99673,77407,99274,75954,77566,108552,79251,90340,77839,95888,101205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[77236],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048194"},{"annotations":[70204],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048211"},{"annotations":[95703],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048210"},{"annotations":[97850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048219"},{"annotations":[98211,79658,100096,103126,75789,109575,77130,109313,97065,102282,71193,75037,77816,78151,104658,106882,73331,57458,69316,69857,88425,96056,70666,97500,99522,78589,70078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006891"},{"annotations":[80079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034499"},{"annotations":[87850],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[79262,73222,93996,74462,110423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006892"},{"annotations":[76403],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060628"},{"annotations":[113366],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000156"},{"annotations":[88723,116576,90913,109249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000301"},{"annotations":[113374,77815,64100,75032,92662,72043,71053,75369,97504,98213,77234,73330,68729,66822,76401,77611,72553,99236,70757,90335,73644,70665,92999,65467,98303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006890"},{"annotations":[75792,77437,73646,57721],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles.","definition_xrefs":["PMID:10219233","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":154,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00072":null,"SJAG_00092":null,"SJAG_00108":null,"SJAG_00144":null,"SJAG_00171":null,"SJAG_00192":null,"SJAG_00314":null,"SJAG_00330":null,"SJAG_00332":null,"SJAG_00357":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00484":null,"SJAG_00557":null,"SJAG_00578":null,"SJAG_00669":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00804":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00899":null,"SJAG_00906":null,"SJAG_00916":null,"SJAG_01003":null,"SJAG_01025":null,"SJAG_01027":null,"SJAG_01071":null,"SJAG_01114":null,"SJAG_01166":null,"SJAG_01279":null,"SJAG_01324":null,"SJAG_01335":null,"SJAG_01409":null,"SJAG_01415":null,"SJAG_01459":null,"SJAG_01488":null,"SJAG_01508":null,"SJAG_01516":null,"SJAG_01598":null,"SJAG_01600":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01899":null,"SJAG_01927":null,"SJAG_01940":null,"SJAG_01945":null,"SJAG_01991":null,"SJAG_02012":null,"SJAG_02103":null,"SJAG_02120":null,"SJAG_02160":null,"SJAG_02177":null,"SJAG_02204":null,"SJAG_02211":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02264":null,"SJAG_02282":null,"SJAG_02316":null,"SJAG_02320":null,"SJAG_02349":null,"SJAG_02418":null,"SJAG_02419":null,"SJAG_02443":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02586":null,"SJAG_02587":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_02824":null,"SJAG_02839":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03054":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03142":null,"SJAG_03153":null,"SJAG_03158":null,"SJAG_03244":null,"SJAG_03268":null,"SJAG_03270":null,"SJAG_03347":null,"SJAG_03467":null,"SJAG_03499":null,"SJAG_03552":null,"SJAG_03558":null,"SJAG_03663":null,"SJAG_03670":null,"SJAG_03726":null,"SJAG_03746":null,"SJAG_03754":null,"SJAG_03756":null,"SJAG_03810":null,"SJAG_03838":null,"SJAG_03842":null,"SJAG_03848":null,"SJAG_03864":null,"SJAG_03889":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_03938":null,"SJAG_03963":null,"SJAG_03970":null,"SJAG_04002":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04044":null,"SJAG_04070":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04219":null,"SJAG_04338":null,"SJAG_04340":null,"SJAG_04358":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04419":null,"SJAG_04434":null,"SJAG_04474":null,"SJAG_04513":null,"SJAG_04528":null,"SJAG_04569":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04609":null,"SJAG_04615":null,"SJAG_04618":null,"SJAG_04701":null,"SJAG_04739":null,"SJAG_04740":null,"SJAG_04837":null,"SJAG_04902":null,"SJAG_04909":null,"SJAG_04931":null,"SJAG_04938":null,"SJAG_04956":null,"SJAG_04966":null,"SJAG_05013":null,"SJAG_05030":null,"SJAG_05209":null,"SJAG_05326":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"Golgi vesicle transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi-derived vesicle transport","type":"related"}],"termid":"GO:0048193","terms_by_termid":{"GO:0000301":null,"GO:0006888":null,"GO:0006890":null,"GO:0006891":null,"GO:0006892":null,"GO:0006893":null,"GO:0006895":null,"GO:0006896":null,"GO:0034498":null,"GO:0034499":null,"GO:0042997":null,"GO:0043001":null,"GO:0048193":null,"GO:0048194":null,"GO:0048205":null,"GO:0048210":null,"GO:0048211":null,"GO:0048219":null,"GO:0048280":null,"GO:0060628":null,"GO:0090110":null,"GO:0090114":null,"GO:2000156":null}}


id: PBO:0030548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_serine_import","termid":"PBO:0030548"}


id: MONDO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Philophthalmus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"echinostomiasis","termid":"MONDO:0005739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"philophthalmiasis","secondary_identifiers":["DOID:0050250"],"synonyms":[{"name":"Philophthalmus caused disease or disorder","type":"exact"},{"name":"Philophthalmus disease or disorder","type":"exact"},{"name":"Philophthalmus infectious disease","type":"exact"}],"termid":"MONDO:0000292","xrefs":{"Monarch":{"xref_id":"0000292"}}}


id: MOD:00698
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a metal atom or a metal cluster for hydrogen atoms, or coordinates a metal ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster containing modified residue","synonyms":[{"name":"MetalRes","type":"exact"}],"termid":"MOD:00698"}


