# terms

id: GO:0035238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the vitamin A compounds, retinol, retinal (retinaldehyde) and retinoic acid. Animals cannot synthesize vitamin A de novo, but form it through oxidative cleavage of carotenoids.","definition_xrefs":["PMID:11158606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin A metabolic process","termid":"GO:0006776"},{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"vitamin A biosynthetic process","synonyms":[{"name":"vitamin A anabolism","type":"exact"},{"name":"vitamin A biosynthesis","type":"exact"},{"name":"vitamin A formation","type":"exact"},{"name":"vitamin A synthesis","type":"exact"}],"termid":"GO:0035238"}


id: MONDO:0024227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A miliaria that is characterized by pustules resulting from inflammation and bacterial infection.","definition_xrefs":["DOID:0070319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria pustulosa","secondary_identifiers":["SCTID:26988005","UMLS:C0026114","MEDGEN:507949"],"termid":"MONDO:0024227","xrefs":{"Monarch":{"xref_id":"0024227"}}}


id: PBO:0055330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2758","termid":"PBO:0055330"}


id: GO:0070499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the formation of an exosporium, the outermost layer of a bacterial endospore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"exosporium assembly","synonyms":[{"name":"exosporium formation","type":"exact"}],"termid":"GO:0070499"}


id: PBO:0069478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 745, pseudogene","termid":"PBO:0069478"}


id: MONDO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic endocrine disease (obsolete MONDO:0015513)","termid":"MONDO:0015513"},{"relation_name":"excluded_subClassOf","term_name":"obsolete anomaly of puberty or/and menstrual cycle of genetic origin (obsolete MONDO:0016072)","termid":"MONDO:0016072"},{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic central precocious puberty","secondary_identifiers":["NCIT:C120372","SCTID:237817008","UMLS:C0342544","Orphanet:169615","ICD9:259.1","MEDGEN:575094"],"termid":"MONDO:0015713","xrefs":{"Monarch":{"xref_id":"0015713"}}}


id: MONDO:0019373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Desmoplastic small round cell tumor (DSRCT) is an aggressive soft tissue cancer that typically arises in serous lined surfaces of the abdominal or pelvic peritoneum, and spreads to the omentum, lymph nodes and hematogenously disseminates especially to the liver. Extraserous primary location has been reported in exceptional cases.","definition_xrefs":["Orphanet:83469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell sarcoma","termid":"MONDO:0006974"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"desmoplastic small round cell tumor","secondary_identifiers":["EFO:1000895","GARD:6265","MESH:D058405","ICDO:8806/3","NANDO:2200059","NCIT:C8300","UMLS:C0281508","MedDRA:10064581","DOID:6785","HGNC:12796","MEDGEN:83833","ONCOTREE:DSRCT","MedDRA:10064587"],"synonyms":[{"name":"DSRCT","type":"exact"},{"name":"Desmoplas. small round cell tumor","type":"exact"},{"name":"Desmoplas. small round cell tumour","type":"exact"},{"name":"Desmoplastic small round cell tumor","type":"exact"},{"name":"Desmoplastic small round cell tumour","type":"exact"},{"name":"Desmoplastic small round-cell neoplasm","type":"exact"},{"name":"Desmoplastic small round-cell tumor","type":"exact"},{"name":"Desmoplastic small round-cell tumour","type":"exact"},{"name":"Polyphenotypic small round cell tumor","type":"exact"},{"name":"Polyphenotypic small round cell tumour","type":"exact"},{"name":"desmoplastic small round cell tumor","type":"exact"},{"name":"desmoplastic small-round-cell tumor","type":"related"},{"name":"desmoplastic small-round-cell tumour","type":"related"}],"termid":"MONDO:0019373","xrefs":{"Monarch":{"xref_id":"0019373"}}}


id: MONDO:0003536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube serous adenocarcinoma (obsolete MONDO:0003536)","termid":"MONDO:0003536","xrefs":{"Monarch":{"xref_id":"0003536"}}}


id: FYPO:0006024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments is normal (i.e. indistinguishable from wild type). The relevant actin-binding protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"normal actin filament binding","synonyms":[{"name":"normal F-actin binding","type":"exact"},{"name":"normal filamentous actin binding","type":"exact"}],"termid":"FYPO:0006024"}


id: GO:1901471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of syringal lignin catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of syringal lignin catabolic process","termid":"GO:1901469"},{"relation_name":"positively_regulates","term_name":"syringal lignin catabolic process","termid":"GO:1901065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of syringal lignin catabolic process","synonyms":[{"name":"activation of S-lignin catabolic process","type":"exact"},{"name":"activation of syringal lignin breakdown","type":"exact"},{"name":"activation of syringal lignin catabolic process","type":"narrow"},{"name":"activation of syringal lignin catabolism","type":"exact"},{"name":"activation of syringal lignin degradation","type":"exact"},{"name":"positive regulation of S-lignin catabolic process","type":"exact"},{"name":"positive regulation of syringal lignin breakdown","type":"exact"},{"name":"positive regulation of syringal lignin catabolism","type":"exact"},{"name":"positive regulation of syringal lignin degradation","type":"exact"},{"name":"up regulation of S-lignin catabolic process","type":"exact"},{"name":"up regulation of syringal lignin breakdown","type":"exact"},{"name":"up regulation of syringal lignin catabolic process","type":"exact"},{"name":"up regulation of syringal lignin catabolism","type":"exact"},{"name":"up regulation of syringal lignin degradation","type":"exact"},{"name":"up-regulation of S-lignin catabolic process","type":"exact"},{"name":"up-regulation of syringal lignin breakdown","type":"exact"},{"name":"up-regulation of syringal lignin catabolic process","type":"exact"},{"name":"up-regulation of syringal lignin catabolism","type":"exact"},{"name":"up-regulation of syringal lignin degradation","type":"exact"},{"name":"upregulation of S-lignin catabolic process","type":"exact"},{"name":"upregulation of syringal lignin breakdown","type":"exact"},{"name":"upregulation of syringal lignin catabolic process","type":"exact"},{"name":"upregulation of syringal lignin catabolism","type":"exact"},{"name":"upregulation of syringal lignin degradation","type":"exact"}],"termid":"GO:1901471"}


id: PBO:0114322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, fatty acid binding protein-like","termid":"PBO:0114322"}


id: MONDO:0011448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"PPARG-related familial partial lipodystrophy","secondary_identifiers":["Orphanet:79083","OMIM:604367","DOID:0070204","GARD:12600","UMLS:C1720861","MEDGEN:328393"],"synonyms":[{"name":"FPLD3","type":"exact"},{"name":"PPARG-related FPLD","type":"exact"},{"name":"familial partial lipodystrophy associated with PPARG mutations","type":"related"},{"name":"familial partial lipodystrophy type 3","type":"exact"},{"name":"insulin resistance, severe, digenic","type":"related"},{"name":"lipodystrophy, familial partial, associated with Pparg mutations","type":"related"},{"name":"lipodystrophy, familial partial, type 3","type":"related"}],"termid":"MONDO:0011448","xrefs":{"Monarch":{"xref_id":"0011448"}}}


id: PBO:0067898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 200","termid":"PBO:0067898"}


id: PBO:0056642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 3","termid":"PBO:0056642"}


id: GO:0007583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete killer activity (obsolete GO:0007583)","synonyms":[{"name":"killer activity","type":"exact"}],"termid":"GO:0007583"}


id: PBO:0089170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin/calnexin homolog","termid":"PBO:0089170"}


id: PBO:0079954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP6 N-terminal like","termid":"PBO:0079954"}


id: PBO:0004979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"28S ribosomal RNA","termid":"PBO:0004979"}


id: PBO:0081481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 358","termid":"PBO:0081481"}


id: GO:0099030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic specialization membrane (obsolete GO:0099030)","termid":"GO:0099030"}


id: MONDO:1012536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical thrombasthenia, non-human animal","termid":"MONDO:1011706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical thrombasthenia, horse","secondary_identifiers":["OMIA:002272-9796"],"termid":"MONDO:1012536","xrefs":{"Monarch":{"xref_id":"1012536"}}}


id: GO:1901006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ubiquinone-6.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone-6 biosynthetic process (obsolete GO:1901006)","synonyms":[{"name":"ubiquinone-6 anabolism","type":"exact"},{"name":"ubiquinone-6 biosynthesis","type":"exact"},{"name":"ubiquinone-6 formation","type":"exact"},{"name":"ubiquinone-6 synthesis","type":"exact"}],"termid":"GO:1901006"}


id: PBO:0114486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; strong preference for dsRNA; remodels RNA-protein complex (RNP) to facilitate efficient transcription termination; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites; promotes Mex67p-mediated nuclear export of mRNA by facilitating annealing with antisense RNAs to create dsRNAs","termid":"PBO:0114486"}


id: MONDO:0016953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 2q duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the long arm (q) of chromosome 2. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 2q duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 2","termid":"MONDO:0016922"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 2","secondary_identifiers":["icd11.foundation:472179859","Orphanet:262842","MESH:C535367","UMLS:C0795805","GARD:5340","MEDGEN:162771"],"synonyms":[{"name":"2q duplication","type":"related"},{"name":"2q trisomy","type":"related"},{"name":"Duplication 2q","type":"related"},{"name":"chromosome 2q duplication","type":"related"},{"name":"partial duplication of chromosome 2q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 2","type":"exact"},{"name":"partial trisomy 2q","type":"related"},{"name":"partial trisomy of chromosome 2q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 2","type":"exact"},{"name":"trisomy 2q","type":"related"}],"termid":"MONDO:0016953","xrefs":{"Monarch":{"xref_id":"0016953"}}}


id: GO:0018904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organic ethers, any anhydride of the general formula R1-O-R2, formed between two identical or nonidentical organic hydroxy compounds.","definition_xrefs":["GOC:pr","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ether metabolic process","synonyms":[{"name":"ether metabolism","type":"exact"},{"name":"organic ether metabolic process","type":"exact"},{"name":"organic ether metabolism","type":"exact"}],"termid":"GO:0018904"}


id: PBO:0024853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LAMTOR2 ortholog Lam2","termid":"PBO:0024853"}


id: GO:0030997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the two centrioles within a centrosome remain tightly paired; may be mediated by the assembly and disassembly of a proteinaceous linker.","definition_xrefs":["PMID:11076968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"},{"relation_name":"regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"}


id: PBO:0012004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mRNA processing protein Cox24/Pet20 (predicted)","termid":"PBO:0012004"}


id: PBO:0085652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mismatch repair and meiotic recombination; only certain frameshift intermediates are mismatch repair substrates; forms a complex with Mlh1p, plays accessory role in stimulating activity of MLH1/PMS1 complex","termid":"PBO:0085652"}


id: GO:0032053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ciliary basal body, a short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum).","definition_xrefs":["GOC:cilia","PMID:9889124","GOC:jl","GOC:krc","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"cilium organization","termid":"GO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"ciliary basal body organization","synonyms":[{"name":"microtubule basal body organisation","type":"broad"},{"name":"microtubule basal body organization","type":"broad"},{"name":"microtubule basal body organization and biogenesis","type":"related"}],"termid":"GO:0032053"}


id: GO:0030093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Photosystem located in the chloroplast that functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem I","termid":"GO:0009522"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"chloroplast photosystem I","termid":"GO:0030093"}


id: PBO:0088969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2H2-type, human ZNF277 ortholog, implicated in transcriptional regulation","termid":"PBO:0088969"}


id: PBO:0083158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the 5' end of ATP1","termid":"PBO:0083158"}


id: GO:0007192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by serotonin binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating serotonin receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase activity by serotonin receptor signalling pathway","type":"related"},{"name":"serotonin receptor, adenylate cyclase activating pathway","type":"related"},{"name":"serotonin receptor, adenylyl cyclase activating pathway","type":"exact"}],"termid":"GO:0007192"}


id: MONDO:0007549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Generalized dominant dystrophic epidermolysis bullosa (DDEB-gen) is a subtype of dystrophic epidermolysis bullosa (DEB), formerly known as DDEB, Pasini and Cockayne-Touraine types, characterized by generalized blistering, milia formation, atrophic scarring, and dystrophic nails.","definition_xrefs":["Orphanet:231568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"generalized dominant dystrophic epidermolysis bullosa","secondary_identifiers":["DOID:0080224","ICD9:757.39","SCTID:75875004","MEDGEN:140935","OMIM:131750","UMLS:C0432322","GARD:2139"],"synonyms":[{"name":"Albopapuloid dominant dystrophic epidermolysis bullosa","type":"related"},{"name":"DDEB","type":"related"},{"name":"DDEB, Pasini and Cockayne-Touraine types","type":"exact"},{"name":"DDEB, generalised","type":"exact"},{"name":"DDEB, generalized","type":"exact"},{"name":"DDEB-gen","type":"exact"},{"name":"autosomal dominant dystrophic epidermolysis bullosa","type":"related"},{"name":"autosomal dominant dystrophic epidermolysis bullosa, Pasini and Cockayne-Touraine types","type":"exact"},{"name":"dominant dystrophic epidermolysis bullosa","type":"related"},{"name":"dominant dystrophic epidermolysis bullosa, generalised","type":"related"},{"name":"dominant dystrophic epidermolysis bullosa, generalized","type":"related"},{"name":"dystrophic epidermolysis bullosa, autosomal dominant","type":"related"},{"name":"epidermolysis bullosa dystrophica with subcorneal cleavage","type":"related"},{"name":"epidermolysis bullosa dystrophica, AD","type":"exact"},{"name":"epidermolysis bullosa dystrophica, Cockayne-Touraine type","type":"related"},{"name":"epidermolysis bullosa dystrophica, Cockayne-Touraine type (formerly)","type":"related"},{"name":"epidermolysis bullosa dystrophica, Pasini type","type":"related"},{"name":"epidermolysis bullosa dystrophica, Pasini type (formerly)","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal dominant","type":"related"}],"termid":"MONDO:0007549","xrefs":{"Monarch":{"xref_id":"0007549"}}}


id: GO:0061444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an endocardial cushion cell over time, from its formation to the mature state.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion cell development","termid":"GO:0061444"}


id: PBO:0002797
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GAp family","termid":"PBO:0002797"}


id: GO:0060565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the activation of APC-Cdc20 complex activity regulating the mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibition of APC-Cdc20 complex activity (obsolete GO:0060565)","synonyms":[{"name":"inhibition of APC activity during mitotic cell cycle","type":"exact"},{"name":"inhibition of APC-Cdc20 complex activity","type":"exact"},{"name":"inhibition of APC/C activity during mitotic cell cycle","type":"related"},{"name":"inhibition of cyclosome activity during mitotic cell cycle","type":"related"},{"name":"inhibition of mitotic anaphase-promoting complex activity","type":"related"}],"termid":"GO:0060565"}


id: PBO:0000512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-tRNA processing endonuclease tRNAse Z L2 Trz1 (predicted)","termid":"PBO:0000512"}


id: GO:1902044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Fas signaling pathway.","definition_xrefs":["PMID:17245429","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"Fas signaling pathway","termid":"GO:0036337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Fas signaling pathway","synonyms":[{"name":"regulation of Apo-1 signaling pathway","type":"exact"},{"name":"regulation of CD95 signaling pathway","type":"exact"},{"name":"regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"regulation of Fas receptor signaling pathway","type":"exact"},{"name":"regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"regulation of FasL signaling pathway","type":"related"},{"name":"regulation of FasR signaling pathway","type":"exact"}],"termid":"GO:1902044"}


id: PBO:0072032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 2","termid":"PBO:0072032"}


id: GO:0021627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the olfactory nerve is generated and organized. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dgh","GOC:dph","ISBN:0838580343","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve morphogenesis","synonyms":[{"name":"CN I morphogenesis","type":"related"}],"termid":"GO:0021627"}


id: MONDO:0011088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the CHRNA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 1A","secondary_identifiers":["DOID:0110663","GARD:15330","MEDGEN:419336","OMIM:601462","UMLS:C2931107"],"synonyms":[{"name":"CHRNA1 congenital myasthenic syndrome","type":"exact"},{"name":"CMS IIa","type":"exact"},{"name":"CMS1A","type":"exact"},{"name":"Cms IIa","type":"related"},{"name":"Cms IIa, formerly","type":"related"},{"name":"congenital myasthenic syndrome 1A, slow-channel","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in CHRNA1","type":"exact"},{"name":"congenital myasthenic syndrome type 1A","type":"exact"},{"name":"congenital myasthenic syndrome type IIa","type":"exact"},{"name":"myasthenic syndrome, congenital, 1A, slow-channel","type":"related"},{"name":"myasthenic syndrome, congenital, type IIa","type":"related"},{"name":"myasthenic syndrome, congenital, type IIa, formerly","type":"related"}],"termid":"MONDO:0011088","xrefs":{"Monarch":{"xref_id":"0011088"}}}


id: PBO:0017909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transmembrane transporter (predicted)","termid":"PBO:0017909"}


id: PBO:0048879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member E, pseudogene","termid":"PBO:0048879"}


id: MONDO:0000759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrorenal syndrome (obsolete MONDO:0000759)","termid":"MONDO:0000759","xrefs":{"Monarch":{"xref_id":"0000759"}}}


id: PBO:0079382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI","termid":"PBO:0079382"}


id: GO:0102139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate + H2O = H+ + anthranilate + (2E)-2-hydroxypenta-2,4-dienoate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-6-oxo-6-(2'-aminophenyl)-hexa-2,4dienoate hydrolase activity (obsolete GO:0102139)","termid":"GO:0102139"}


id: PBO:0070399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ROS proto-oncogene 1, receptor tyrosine kinase","termid":"PBO:0070399"}


id: GO:0052631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-(4R)-4-hydroxysphinganine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (4R,8E)-4-hydroxysphingenine ceramide + 2 Fe(III)-[cytochrome b5] + 2 H2O or an N-acyl-(4R)-4-hydroxysphinganine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (4R,8Z)-4-hydroxysphing-8-enine ceramide + 2 Fe(III)-[cytochrome b5] + 2 H2O. This results in the formation of a double bond between C8 and C9 of the long chain base of a sphingolipid.","definition_xrefs":["PMID:9786850","PMID:17600137","EC:1.14.19.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sphingolipid 8-(E/Z)-desaturase activity","synonyms":[{"name":"8 fatty acid desaturase","type":"exact"},{"name":"8-sphingolipid desaturase","type":"exact"},{"name":"sphingolipid delta-8 desaturase activity","type":"exact"}],"termid":"GO:0052631"}


id: PBO:0063083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate synthase 2","termid":"PBO:0063083"}


id: GO:0047204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate + chlorogenate = (-)-quinate + 2-O-caffeoylglucarate.","definition_xrefs":["EC:2.3.1.98","RHEA:23204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"chlorogenate-glucarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.98-RXN","KEGG_REACTION:R02998"],"synonyms":[{"name":"chlorogenate:glucarate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"chlorogenate:glucarate caffeoyltransferase activity","type":"related"},{"name":"chlorogenic acid:glucaric acid O-caffeoyltransferase activity","type":"related"}],"termid":"GO:0047204"}


id: GO:0102964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-corytuberine + S-adenosyl-L-methionine = magnoflorine + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:51524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:(S)-corytuberine-N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9315"],"termid":"GO:0102964"}


id: PBO:0065255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 21","termid":"PBO:0065255"}


id: GO:0015346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ferric triacetylfusarinine C(out) + H+(out) = ferric triacetylfusarinine C(in) + H+(in).","definition_xrefs":["TC:2.A.1.16.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"ferric triacetylfusarinine C transmembrane transporter activity","termid":"GO:0015621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ferric triacetylfusarinine C:proton symporter activity","synonyms":[{"name":"ferric triacetylfusarinine C:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015346"}


id: GO:0071417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organonitrogen stimulus. An organonitrogen compound is formally a compound containing at least one carbon-nitrogen bond.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to organonitrogen compound (obsolete GO:0071417)","synonyms":[{"name":"cellular response to organic nitrogen","type":"exact"}],"termid":"GO:0071417"}


id: GO:0010762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"fibroblast migration","termid":"GO:0010761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast migration","synonyms":[{"name":"regulation of fibroblast cell migration","type":"exact"}],"termid":"GO:0010762"}


id: PBO:0067303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 388, pseudogene","termid":"PBO:0067303"}


id: MONDO:0100460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing nicotine dependence.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tobacco addiction, susceptibility to","secondary_identifiers":["OMIM:188890","MEDGEN:348778","UMLS:C1861063"],"synonyms":[{"name":"cigarette habituation, susceptibility to","type":"exact"},{"name":"nicotine addiction, protection from","type":"exact"},{"name":"nicotine addiction, susceptibility to","type":"exact"},{"name":"nicotine dependence, protection against","type":"exact"},{"name":"nicotine dependence, susceptibility to","type":"exact"},{"name":"smoking habit, susceptibility to","type":"exact"},{"name":"susceptibility to tobacco addiction","type":"exact"},{"name":"tobacco addiction, susceptibility to","type":"exact"}],"termid":"MONDO:0100460","xrefs":{"Monarch":{"xref_id":"0100460"}}}


id: PBO:0075367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX5 pseudogene 1","termid":"PBO:0075367"}


id: PBO:0079620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L5","termid":"PBO:0079620"}


id: GO:1990866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sustained stimulus indicating lowered oxygen tension.","definition_xrefs":["PMID:24055447"],"gene_count":0,"genotype_count":0,"name":"obsolete response to sustained hypoxia (obsolete GO:1990866)","termid":"GO:1990866"}


id: FYECO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to stationary phase.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase","termid":"FYECO:0000123"}


id: GO:0035644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from a phosphorylated anandamide.","definition_xrefs":["GOC:BHF","PMID:16938887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphoanandamide dephosphorylation","termid":"GO:0035644"}


id: GO:0061348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the ventricular septum.","definition_xrefs":["GOC:dph","GOC:mtg_heart","PMID:19056682"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in ventricular septum morphogenesis (obsolete GO:0061348)","termid":"GO:0061348"}


id: MONDO:1010197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myositis ossificans that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy, non-human animal","termid":"MONDO:1010195"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myositis ossificans, non-human animal","secondary_identifiers":["OMIA:000697"],"termid":"MONDO:1010197","xrefs":{"Monarch":{"xref_id":"1010197"}}}


id: PBO:0075126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF related kinase","termid":"PBO:0075126"}


id: PBO:0056214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B16","termid":"PBO:0056214"}


id: PBO:0086138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for mismatch repair in mitosis and meiosis; forms a complex with Msh2p to repair both single-base & insertion-deletion mispairs; also involved in interstrand cross-link repair; potentially phosphorylated by Cdc28p; contains PIP motif that binds PCNA (Pol30p) and Rev1p","termid":"PBO:0086138"}


id: PBO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies2","termid":"PBO:0001540"}


id: PBO:0067231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 302, pseudogene","termid":"PBO:0067231"}


id: PBO:0110106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi-specific 1-phosphatidylinositol 4-kinase, type III-beta Pik1","termid":"PBO:0110106"}


id: GO:0031068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone deacetylation at centromere (obsolete GO:0031068)","synonyms":[{"name":"activation of histone deacetylation at centromere","type":"narrow"},{"name":"stimulation of histone deacetylation at centromere","type":"narrow"},{"name":"up regulation of histone deacetylation at centromere","type":"exact"},{"name":"up-regulation of histone deacetylation at centromere","type":"exact"},{"name":"upregulation of histone deacetylation at centromere","type":"exact"}],"termid":"GO:0031068"}


id: PBO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_multiseptate_vegetative_cell,_single_septa_between_nuclei","termid":"PBO:0030366"}


id: PBO:0001381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Pst2","termid":"PBO:0001381"}


id: GO:0018218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation of peptidyl-cysteine to form peptidyl-S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine phosphorylation (obsolete GO:0018218)","termid":"GO:0018218"}


id: MONDO:0014296
data:
  {"annotated_genes":["SJAG_04938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85412],"is_not":false,"summary":null,"term":"MONDO:0014296"}]},"cv_name":"mondo","definition":"Any Warburg micro syndrome in which the cause of the disease is a mutation in the TBC1D20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Warburg micro syndrome","termid":"MONDO:0016649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04938":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320","MONDO:0006025"],"is_obsolete":false,"name":"Warburg micro syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15998","UMLS:C3810265","MEDGEN:816595","DOID:0110719","OMIM:615663"],"synonyms":[{"name":"TBC1D20 Warburg micro syndrome","type":"exact"},{"name":"WARBM4","type":"exact"},{"name":"WARBURG micro syndrome 4","type":"related"},{"name":"Warburg micro syndrome 4","type":"exact"},{"name":"Warburg micro syndrome caused by mutation in TBC1D20","type":"exact"},{"name":"Warburg micro syndrome type 4","type":"exact"},{"name":"micro syndrome 4","type":"exact"}],"termid":"MONDO:0014296","terms_by_termid":{"MONDO:0014296":null},"xrefs":{"Monarch":{"xref_id":"0014296"}}}


id: PBO:0017658
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly","termid":"PBO:0017658"}


id: PBO:0082823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved nuclear RNA-binding protein; specifically binds to transcribed chromatin in a THO- and RNA-dependent manner, genetically interacts with shuttling hnRNP NAB2; overproduction suppresses transcriptional defect caused by hpr1 mutation","termid":"PBO:0082823"}


id: PBO:0016567
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CLN3","termid":"PBO:0016567"}


id: GO:0090404
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region at growing end of the pollen tube cell, where polarized growth occurs.","definition_xrefs":["GOC:tb","PO:0025281","PO:0025195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growing cell tip","termid":"GO:0035838"},{"relation_name":"part_of","term_name":"pollen tube","termid":"GO:0090406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pollen tube tip","termid":"GO:0090404"}


id: PBO:0065338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinase 3","termid":"PBO:0065338"}


id: MONDO:0001298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mitral valve insufficiency that is present at birth.","definition_xrefs":["NCIT:C197881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"},{"relation_name":"is_a","term_name":"mitral valve insufficiency","termid":"MONDO:1030008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital mitral valve insufficiency","secondary_identifiers":["NANDO:2200303","SCTID:29928006","MEDGEN:510600","ICD9:396.3","UMLS:C0158619","ICD9:746.6","MESH:D008944"],"synonyms":[{"name":"congenital insufficiency of mitral valve","type":"exact"},{"name":"congenital mitral insufficiency","type":"exact"}],"termid":"MONDO:0001298","xrefs":{"Monarch":{"xref_id":"0001298"}}}


id: PBO:0067743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 42","termid":"PBO:0067743"}


id: GO:0061204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation or disassembly of a filament composed of paramyosin molecules.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"paramyosin filament assembly or disassembly","termid":"GO:0061204"}


id: PBO:0087277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain protein implicated in regulating actin polymerization; able to recruit actin polymerization machinery through its SH3 domains; colocalizes with cortical actin patches and Las17p; interacts with type I myosins","termid":"PBO:0087277"}


id: PBO:0069614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 891, pseudogene","termid":"PBO:0069614"}


id: GO:1900595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-kotanin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"(+)-kotanin metabolic process","termid":"GO:1900594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-kotanin catabolic process","synonyms":[{"name":"(+)-kotanin breakdown","type":"exact"},{"name":"(+)-kotanin catabolism","type":"exact"},{"name":"(+)-kotanin degradation","type":"exact"}],"termid":"GO:1900595"}


id: PBO:0086559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YML122C is not an essential gene","termid":"PBO:0086559"}


id: GO:0075137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont organism or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the redox environment in host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host redox environment","synonyms":[{"name":"response of symbiont to host redox environment","type":"exact"}],"termid":"GO:0075137"}


id: PBO:0085646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic progression; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; possible membrane-localized protein; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085646"}


id: MONDO:0005953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating adenocarcinoma characterized by the presence of desmoplastic stromal reaction.","definition_xrefs":["NCIT:C2928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"scirrhous adenocarcinoma","secondary_identifiers":["MEDGEN:2873","UMLS:C0007135","EFO:0007478","MESH:D002293","DOID:4024","ICDO:8141/3"],"synonyms":[{"name":"FIBROADENOCARCINOMA, malignant","type":"exact"},{"name":"adenocarcinoma with productive fibrosis","type":"exact"},{"name":"fibrocarcinoma","type":"exact"},{"name":"scirrhous adenocarcinoma","type":"exact"},{"name":"scirrhous adenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"scirrhous carcinoma","type":"exact"}],"termid":"MONDO:0005953","xrefs":{"Monarch":{"xref_id":"0005953"}}}


id: GO:0007007
data:
  {"annotated_genes":["SJAG_05300","SJAG_01917","SJAG_03633","SJAG_02002","SJAG_02028","SJAG_01405","SJAG_03282","SJAG_00687","SJAG_03502","SJAG_04208","SJAG_02656","SJAG_05241","SJAG_04237","SJAG_04965","SJAG_01949","SJAG_06468","SJAG_02524","SJAG_01640","SJAG_04996","SJAG_02501","SJAG_02398","SJAG_00404","SJAG_03515","SJAG_01120","SJAG_05302"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75172,92248],"is_not":false,"summary":null,"term":"GO:0007007"},{"annotations":[78291,89254,107072,78480,101456,74790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042407"},{"annotations":[104666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990627"},{"annotations":[90154,107343,77599,88417,102675,73288,116009,107321,73772,112941,75406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[78037,74234,78461,58164,78386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial inner membrane.","definition_xrefs":["GOC:dph","GOC:ai","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01640":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_02002":null,"SJAG_02028":null,"SJAG_02398":null,"SJAG_02501":null,"SJAG_02524":null,"SJAG_02656":null,"SJAG_03282":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03633":null,"SJAG_04208":null,"SJAG_04237":null,"SJAG_04965":null,"SJAG_04996":null,"SJAG_05241":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_06468":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007005"],"is_obsolete":false,"name":"inner mitochondrial membrane organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"inner mitochondrial membrane organisation","type":"exact"},{"name":"inner mitochondrial membrane organization and biogenesis","type":"related"},{"name":"mitochondrial inner membrane organization","type":"exact"}],"termid":"GO:0007007","terms_by_termid":{"GO:0007007":null,"GO:0032979":null,"GO:0042407":null,"GO:0045039":null,"GO:1990627":null}}


id: MOD:01073
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a 2-chlorobenzyloxycarbonyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-chlorobenzyloxycarbonyl modified residue","synonyms":[{"name":"Clz","type":"exact"}],"termid":"MOD:01073"}


id: MONDO:0013541
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85726],"is_not":false,"summary":null,"term":"MONDO:0013541"}]},"cv_name":"mondo","definition":"Any complex cortical dysplasia with other brain malformations in which the cause of the disease is a mutation in the TUBB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3808397","OMIM:614039","DOID:0090137","GARD:13032","Orphanet:300570","MEDGEN:814727"],"synonyms":[{"name":"CDCBM1","type":"exact"},{"name":"TUBB3 complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations caused by mutation in TUBB3","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations type 1","type":"exact"},{"name":"cortical dysgenesis with pontocerebellar hypoplasia due to TUBB3 mutation","type":"exact"},{"name":"cortical dysplasia, Complex, with Other brain malformations type 1","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations 1","type":"related"}],"termid":"MONDO:0013541","terms_by_termid":{"MONDO:0013541":null},"xrefs":{"Monarch":{"xref_id":"0013541"}}}


id: GO:0102631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-O-caffeoyl-beta-D-glucose + S-adenosyl-L-methionine = 1-O-feruloyl-beta-D-glucose + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete caffeoylglucose 3-O-methyltransferase activity (obsolete GO:0102631)","termid":"GO:0102631"}


id: GO:0044830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism modulates the frequency, rate or extent of viral RNA genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral genome replication","termid":"GO:0044827"},{"relation_name":"regulates","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral RNA genome replication","synonyms":[{"name":"regulation by host of viral RNA genome replication","type":"exact"}],"termid":"GO:0044830"}


id: GO:1901054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sarcosine.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:31402327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"sarcosine metabolic process","termid":"GO:1901052"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"sarcosine biosynthetic process","synonyms":[{"name":"sarcosine anabolism","type":"exact"},{"name":"sarcosine biosynthesis","type":"exact"},{"name":"sarcosine formation","type":"exact"},{"name":"sarcosine synthesis","type":"exact"}],"termid":"GO:1901054"}


id: PBO:0025434
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disorders","termid":"PBO:0025434"}


id: PBO:0048945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOSR2 divergent transcript","termid":"PBO:0048945"}


id: MONDO:0024548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peeling skin syndrome in which the cause of the disease is a mutation in the CDSN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized peeling skin syndrome","termid":"MONDO:0010033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"peeling skin syndrome 1","secondary_identifiers":["Orphanet:263553","MEDGEN:336530","UMLS:C1849193","DOID:0070520","GARD:17259","OMIM:270300"],"synonyms":[{"name":"CDSN peeling skin syndrome","type":"exact"},{"name":"PSS","type":"related"},{"name":"PSS type B","type":"exact"},{"name":"PSS1","type":"related"},{"name":"deciduous skin","type":"related"},{"name":"generalised deciduous skin type B","type":"exact"},{"name":"generalised peeling skin syndrome type B","type":"exact"},{"name":"generalized deciduous skin type B","type":"exact"},{"name":"generalized peeling skin syndrome type B","type":"exact"},{"name":"inflammatory peeling skin syndrome","type":"exact"},{"name":"keratolysis exfoliativa congenita","type":"related"},{"name":"peeling skin syndrome 1","type":"exact"},{"name":"peeling skin syndrome caused by mutation in CDSN","type":"exact"},{"name":"peeling skin syndrome type B","type":"exact"},{"name":"skin peeling, familial continuous generalised","type":"related"},{"name":"skin peeling, familial continuous generalized","type":"related"}],"termid":"MONDO:0024548","xrefs":{"Monarch":{"xref_id":"0024548"}}}


id: GO:0045586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-delta T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"regulates","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-delta T cell differentiation","synonyms":[{"name":"regulation of gamma-delta T cell development","type":"related"},{"name":"regulation of gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"regulation of gamma-delta T-cell differentiation","type":"exact"},{"name":"regulation of gamma-delta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045586"}


id: MONDO:0016354
data:
  {"annotated_genes":["SJAG_00995","SJAG_02031","SJAG_03206","SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012531"},{"annotations":[86450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010212"},{"annotations":[86409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010215"},{"annotations":[86360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010216"}]},"cv_name":"mondo","definition":"Xeroderma pigmentosum/Cockayne syndrome complex (XP/CS complex) is characterized by the cutaneous features of xeroderma pigmentosum (XP) together with the systemic and neurological features of Cockayne syndrome (CS).","definition_xrefs":["Orphanet:220295"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"excluded_subClassOf","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_02031":null,"SJAG_02556":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"xeroderma pigmentosum-Cockayne syndrome complex","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C156031","ICD10CM:Q82.1","UMLS:C4304411","GARD:17130","icd11.foundation:2002862606","MEDGEN:930080"],"synonyms":[{"name":"XP/CS complex","type":"exact"}],"termid":"MONDO:0016354","terms_by_termid":{"MONDO:0010212":null,"MONDO:0010215":null,"MONDO:0010216":null,"MONDO:0012531":null},"xrefs":{"Monarch":{"xref_id":"0016354"}}}


id: MONDO:0020235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lens size anomaly (obsolete MONDO:0020235)","secondary_identifiers":["Orphanet:98652"],"termid":"MONDO:0020235","xrefs":{"Monarch":{"xref_id":"0020235"}}}


id: PBO:0084518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; required for respiratory growth; null mutant displays induction of the unfolded protein response; homologous to worm Y62E10A.10/EMC-3, fly CG6750, human TMEM111","termid":"PBO:0084518"}


id: PBO:0051186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-79 (pseudogene)","termid":"PBO:0051186"}


id: GO:0120044
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The tapered base of the stereocilium adjacent to where it joins the hair cell body. This region contains a rootlet comprised of bundled actin filaments which spans the joint and stabilizes the stereocilium.","definition_xrefs":["PMID:20170899","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium base","synonyms":[{"name":"stereocilium taper","type":"exact"}],"termid":"GO:0120044"}


id: MONDO:0015247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Opsoclonus myoclonus syndrome (OMS) is a rare neuroinflammatory disease of paraneoplastic, parainfectious or idiopathic origin, characterized by opsoclonus, myoclonus, ataxia, and behavioral and sleep disorders.","definition_xrefs":["Orphanet:1183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"paraneoplastic neurologic syndrome","termid":"MONDO:0018215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsoclonus-myoclonus syndrome","secondary_identifiers":["NORD:1527","ICD9:379.59","MedDRA:10053854","MESH:D053578","UMLS:C0393626","GARD:10009","MEDGEN:97955","EFO:1001383","NCIT:C4686","SCTID:230350000"],"synonyms":[{"name":"Ataxo-opso-myoclonus syndrome","type":"exact"},{"name":"Kinsbourne syndrome","type":"exact"},{"name":"OMS","type":"exact"},{"name":"Opsoclonus-Myoclonus-Ataxia Syndrome","type":"exact"},{"name":"POMA syndrome","type":"exact"},{"name":"dancing eye syndrome","type":"exact"},{"name":"dancing eye-dancing feet syndrome","type":"exact"},{"name":"oma syndrome","type":"exact"},{"name":"opsoclonus myoclonus syndrome","type":"exact"},{"name":"opsoclonus-myoclonus-ataxia syndrome","type":"exact"},{"name":"paraneoplastic opsoclonus-myoclonus","type":"exact"},{"name":"paraneoplastic opsoclonus-myoclonus-ataxia syndrome","type":"exact"}],"termid":"MONDO:0015247","xrefs":{"Monarch":{"xref_id":"0015247"}}}


id: FYPO:0006866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the actomyosin contractile ring is increased. Normally, proteins including actin and myosin are turned over between the contractile ring and elsewhere in the cytoplasm; exchange is faster during than before ring constriction.","definition_xrefs":["PMID:30928696","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased rate of protein exchange in actomyosin contractile ring","synonyms":[{"name":"increased rate of protein exchange in actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"increased rate of protein exchange in actomyosin contractile ring during vegetative growth","type":"exact"}],"termid":"FYPO:0006866"}


id: GO:0097173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylmuramic acid (MurNAc), a monosaccharide derivative of N-acetylglucosamine.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"N-acetylmuramic acid metabolic process","termid":"GO:0097172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N-acetylmuramic acid catabolic process","synonyms":[{"name":"N-acetylmuramate breakdown","type":"exact"},{"name":"N-acetylmuramate catabolic process","type":"exact"},{"name":"N-acetylmuramate catabolism","type":"exact"},{"name":"N-acetylmuramate degradation","type":"exact"},{"name":"N-acetylmuramic acid breakdown","type":"exact"},{"name":"N-acetylmuramic acid catabolism","type":"exact"},{"name":"N-acetylmuramic acid degradation","type":"exact"}],"termid":"GO:0097173"}


id: MONDO:0022103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious or non-infectious chronic inflammatory process that affects the prostate gland.","definition_xrefs":["NCIT:C26930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostatitis","termid":"MONDO:0005280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic prostatitis","secondary_identifiers":["UMLS:C0085696","ICD9:601.1","MEDGEN:88454","icd11.foundation:249426483","SCTID:19905009"],"synonyms":[{"name":"Chronic Prostatitis","type":"related"},{"name":"Chronic prostatitis","type":"related"},{"name":"chronic prostatitis","type":"exact"}],"termid":"MONDO:0022103","xrefs":{"Monarch":{"xref_id":"0022103"}}}


id: PBO:0027100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rDNA_antisense_small_RNA_level","termid":"PBO:0027100"}


id: PBO:0069394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 654, pseudogene","termid":"PBO:0069394"}


id: FYPO:0000693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased DNA-1,N6-ethenoadenine N-glycosylase activity","synonyms":[{"name":"reduced DNA-1,N6-ethenoadenine N-glycosylase activity","type":"exact"}],"termid":"FYPO:0000693"}


id: PBO:0077779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-methyltransferase","termid":"PBO:0077779"}


id: PBO:0049963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 9","termid":"PBO:0049963"}


id: PBO:0068579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 30, pseudogene","termid":"PBO:0068579"}


id: MONDO:0010257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, X-linked 1","secondary_identifiers":["MEDGEN:339479","OMIM:300147","GARD:15253","UMLS:C1846279"],"synonyms":[{"name":"HPCX1","type":"exact"},{"name":"prostate cancer susceptibility, X-linked","type":"related"},{"name":"prostate cancer, hereditary, X-linked 1","type":"exact"}],"termid":"MONDO:0010257","xrefs":{"Monarch":{"xref_id":"0010257"}}}


id: MONDO:0020498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Lassa fever (obsolete MONDO:0020498)","termid":"MONDO:0020498","xrefs":{"Monarch":{"xref_id":"0020498"}}}


id: PBO:0072130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 7","termid":"PBO:0072130"}


id: MONDO:1011112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, pig","secondary_identifiers":["OMIA:000243-9823"],"termid":"MONDO:1011112","xrefs":{"Monarch":{"xref_id":"1011112"}}}


id: MOD:01543
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01543"}


id: MONDO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dyskinetic cerebral palsy (obsolete MONDO:0000399)","termid":"MONDO:0000399","xrefs":{"Monarch":{"xref_id":"0000399"}}}


id: PBO:0089958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ragulator complex Rag GEF subunit","termid":"PBO:0089958"}


id: GO:0032107
data:
  {"annotated_genes":["SJAG_02785","SJAG_03048","SJAG_04268","SJAG_03319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043609"},{"annotations":[102139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904547"},{"annotations":[113573,70334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to nutrient levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02785":null,"SJAG_03048":null,"SJAG_03319":null,"SJAG_04268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to nutrient levels","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032107","terms_by_termid":{"GO:0006808":null,"GO:0043609":null,"GO:1904547":null}}


id: MOD:01624
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an asparagine and the following glycine residue with the formation of (2-aminosuccinimidyl)acetic acid and the release of ammonia.","definition_xrefs":["PubMed:10801322","RESID:AA0441#ASN","PubMed:2015294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid (Asn)","synonyms":[{"name":"(2-aminosuccinimidyl)acetic acid","type":"exact"},{"name":"(3-amino-2,5-dioxo-1-pyrrolidinyl)acetic acid","type":"exact"},{"name":"CROSSLNK (2-aminosuccinimidyl)acetic acid (Asn-Gly)","type":"exact"},{"name":"N-(2-aminosuccinyl)glycine","type":"exact"},{"name":"[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]acetic acid","type":"exact"},{"name":"anhydroaspartyl glycine","type":"exact"},{"name":"aspartimide glycine","type":"exact"}],"termid":"MOD:01624"}


id: PBO:0083237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion reduces expression of PIS1 gene encoding phosphatidylinositol synthase","termid":"PBO:0083237"}


id: GO:0098867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an intramembranous bone that contributes to the shaping of the bone.","definition_xrefs":["PMID:26399686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone growth","termid":"GO:0098868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intramembranous bone growth","termid":"GO:0098867"}


id: PBO:0066162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome binding factor A","termid":"PBO:0066162"}


id: GO:0075101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont protein kinase-mediated signal transduction (obsolete GO:0075101)","termid":"GO:0075101"}


id: GO:0046068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"cyclic purine nucleotide metabolic process","termid":"GO:0052652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"cGMP metabolic process","synonyms":[{"name":"cGMP metabolism","type":"exact"}],"termid":"GO:0046068"}


id: GO:0033994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1->4)-beta-D-glucuronan = an oligosaccharide with 4-deoxy-beta-D-gluc-4-enuronosyl end + (1->4)-beta-D-glucuronan. This reaction is the eliminative cleavage of (1->4)-beta-D-glucuronans to give oligosaccharides with 4-deoxy-beta-D-gluc-4-enuronosyl groups at their non-reducing ends. Complete degradation of glucuronans results in the formation of tetrasaccharides.","definition_xrefs":["EC:4.2.2.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucuronan lyase activity","secondary_identifiers":["MetaCyc:4.2.2.14-RXN"],"synonyms":[{"name":"(1,4)-beta-D-glucuronan lyase activity","type":"related"}],"termid":"GO:0033994"}


id: PBO:0041992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 38","termid":"PBO:0041992"}


id: PBO:0048140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 4","termid":"PBO:0048140"}


id: PBO:0041253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 174","termid":"PBO:0041253"}


id: GO:0072170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a metanephric tubule over time, from its initial formation to the mature structure. A metanephric tubule is an epithelial tube that is part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"metanephric epithelium development","termid":"GO:0072207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric tubule development","termid":"GO:0072170"}


id: GO:0043003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transport of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Golgi to plasma membrane CFTR protein transport (obsolete GO:0043003)","synonyms":[{"name":"activation of Golgi to plasma membrane CFTR protein transport","type":"narrow"},{"name":"stimulation of Golgi to plasma membrane CFTR protein transport","type":"narrow"},{"name":"up regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"up-regulation of Golgi to plasma membrane CFTR protein transport","type":"exact"},{"name":"upregulation of Golgi to plasma membrane CFTR protein transport","type":"exact"}],"termid":"GO:0043003"}


id: FYPO:0002561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"},{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000032","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to actomyosin contractile ring","synonyms":[{"name":"abolished protein localisation to actomyosin contractile ring","type":"exact"},{"name":"abolished protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"abolished protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"abolished protein localization to contractile ring","type":"exact"},{"name":"abolished protein localization to cytokinetic contractile ring","type":"exact"},{"name":"abolished protein localization to mitotic contractile ring","type":"exact"},{"name":"abolished protein recruitment to actomyosin contractile ring","type":"related"},{"name":"protein localization to actomyosin contractile ring abolished","type":"exact"}],"termid":"FYPO:0002561"}


id: PBO:0038276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_insertion","termid":"PBO:0038276"}


id: MONDO:0004282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eccrine porocarcinoma (obsolete MONDO:0004282)","termid":"MONDO:0004282","xrefs":{"Monarch":{"xref_id":"0004282"}}}


id: GO:0044361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a voltage-gated potassium channel in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of voltage-gated potassium channel activity in another organism (obsolete GO:0044361)","synonyms":[{"name":"negative regulation of voltage-gated potassium channel activity in other organism","type":"exact"}],"termid":"GO:0044361"}


id: FYPO:0007804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the ATP hydrolysis-dependent activity that loads H3-H4 histone dimers onto DNA is abnormal.","definition_xrefs":["PomBase:mah","PMID:31848341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0005447","FYPO:0001985","FYPO:0000652","FYPO:0000002","FYPO:0000641","FYPO:0000654"],"is_obsolete":false,"name":"abnormal H3-H4 dimer loading onto DNA","synonyms":[{"name":"abnormal H3-H4 dimer loading activity","type":"exact"},{"name":"abnormal histone H3-H4 dimer loading activity","type":"exact"}],"termid":"FYPO:0007804"}


id: GO:0140959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An inhibitor activity that acts by base-pairing with a miRNA, exposing it to nuclease-mediated degradation.","definition_xrefs":["PMID:36150386","PMID:33184237"],"gene_count":0,"genotype_count":0,"name":"obsolete base-pairing target-directed miRNA suppressor activity (obsolete GO:0140959)","synonyms":[{"name":"base-pairing target-directed microRNA suppressor activity","type":"exact"}],"termid":"GO:0140959"}


id: SO:0000665
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is monocistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"monocistronic","termid":"SO:0000878"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic_transcript","synonyms":[{"name":"monocistronic transcript","type":"exact"}],"termid":"SO:0000665"}


id: GO:0034429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the optic tectum towards target cells in the premotor reticulospinal system in the hindbrain.","definition_xrefs":["GOC:dsf","PMID:8038988","PMID:15065115","PMID:17507550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tectobulbar tract morphogenesis","termid":"GO:0034429"}


id: PBO:0086372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl-alcohol dehydrogenase; involved in oxidative stress response; similar to P. chrysosporium aryl-alcohol dehydrogenase; expression induced in cells treated with the mycotoxin patulin; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086372"}


id: MONDO:1012275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"tibial dyschondroplasia, non-human animal","termid":"MONDO:1011954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tibial dyschondroplasia, chicken","secondary_identifiers":["OMIA:001007-9031"],"termid":"MONDO:1012275","xrefs":{"Monarch":{"xref_id":"1012275"}}}


id: PBO:0062612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily U member 1 pseudogene","termid":"PBO:0062612"}


id: PBO:0045112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin matrix acidic phosphoprotein 1","termid":"PBO:0045112"}


id: MONDO:1012104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hodgkin disease, non-human animal","termid":"MONDO:1011808"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hodgkin disease, dog","secondary_identifiers":["OMIA:000476-9615"],"termid":"MONDO:1012104","xrefs":{"Monarch":{"xref_id":"1012104"}}}


id: GO:0009807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["PMID:10074466","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"lignan biosynthetic process","synonyms":[{"name":"lignan anabolism","type":"exact"},{"name":"lignan biosynthesis","type":"exact"},{"name":"lignan formation","type":"exact"},{"name":"lignan synthesis","type":"exact"}],"termid":"GO:0009807"}


id: PBO:0086897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family; YFL040W is not an essential gene; may have a role in intracellular sterol transport","termid":"PBO:0086897"}


id: PBO:0087312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small subunit of carbamoyl phosphate synthetase; carbamoyl phosphate synthetase catalyzes a step in the synthesis of citrulline, an arginine precursor; translationally regulated by an attenuator peptide encoded by YOR302W within the CPA1 mRNA 5'-leader","termid":"PBO:0087312"}


id: PBO:0005708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc53 (predicted)","termid":"PBO:0005708"}


id: PBO:0091852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting lincRNA Ste11 repressor","termid":"PBO:0091852"}


id: GO:0018472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxy-2-naphthaldehyde + NAD+ + H2O = NADH + H+ + 1-hydroxy-2-naphthoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxy-2-naphthaldehyde dehydrogenase activity (obsolete GO:0018472)","termid":"GO:0018472"}


id: PR:O14202
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug116 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 116 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.10c","synonyms":[{"name":"Spom972h-mug116","type":"exact"}],"termid":"PR:O14202"}


id: MONDO:0005807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare immunodeficiency syndrome characterized by the decrease of the CD4-positive lymphocytes below 300 per cubic millimeter in the absence of identifiable immunodeficiency causes. Patients with this syndrome are at an increased risk of opportunistic infections.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell immunodeficiency","termid":"MONDO:0003780"},{"relation_name":"is_a","term_name":"lymphopenia","termid":"MONDO:0003783"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"idiopathic CD4-positive T-lymphocytopenia","secondary_identifiers":["DOID:3109","UMLS:C0206744","MEDGEN:64647","MESH:D018344","NCIT:C84780"],"termid":"MONDO:0005807","xrefs":{"Monarch":{"xref_id":"0005807"}}}


id: GO:1901675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K27 acetylation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K27 acetylation (obsolete GO:1901675)","synonyms":[{"name":"down regulation of histone H3 acetylation at K27","type":"exact"},{"name":"down regulation of histone H3-K27 acetylation","type":"exact"},{"name":"down regulation of histone H3K27 acetylation","type":"exact"},{"name":"down-regulation of histone H3 acetylation at K27","type":"exact"},{"name":"down-regulation of histone H3-K27 acetylation","type":"exact"},{"name":"down-regulation of histone H3K27 acetylation","type":"exact"},{"name":"downregulation of histone H3 acetylation at K27","type":"exact"},{"name":"downregulation of histone H3-K27 acetylation","type":"exact"},{"name":"downregulation of histone H3K27 acetylation","type":"exact"},{"name":"inhibition of histone H3 acetylation at K27","type":"exact"},{"name":"inhibition of histone H3-K27 acetylation","type":"narrow"},{"name":"inhibition of histone H3K27 acetylation","type":"exact"},{"name":"negative regulation of histone H3 acetylation at K27","type":"exact"},{"name":"negative regulation of histone H3K27 acetylation","type":"exact"}],"termid":"GO:1901675"}


id: GO:0048928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron of the posterior lateral line ganglion.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line ganglion neuron differentiation","termid":"GO:0048891"},{"relation_name":"part_of","term_name":"posterior lateral line ganglion development","termid":"GO:0048917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line ganglion neuron differentiation","termid":"GO:0048928"}


id: PBO:0055354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2783","termid":"PBO:0055354"}


id: MONDO:0010488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the KIF4A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 100","secondary_identifiers":["UMLS:C3890167","OMIM:300923","DOID:0112040","MEDGEN:855516"],"synonyms":[{"name":"KIF4A non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX100","type":"related"},{"name":"intellectual developmental disorder, X-linked 100, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 100","type":"exact"},{"name":"intellectual disability, X-linked type 100","type":"exact"},{"name":"mental retardation, X-linked 100","type":"related"},{"name":"mental retardation, X-linked type 100","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in KIF4A","type":"exact"}],"termid":"MONDO:0010488","xrefs":{"Monarch":{"xref_id":"0010488"}}}


id: PBO:0069152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 403, pseudogene","termid":"PBO:0069152"}


id: MONDO:0014140
data:
  {"annotated_genes":["SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85712],"is_not":false,"summary":null,"term":"MONDO:0014140"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"},{"relation_name":"is_a","term_name":"myopathy caused by variation in GMPPB","termid":"MONDO:0700084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005336","MONDO:0002320","MONDO:0005066"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815546","OMIM:615350","GARD:15948","UMLS:C3809216","DOID:0111233"],"synonyms":[{"name":"MDDGA14","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, GMPPB-related","type":"related"},{"name":"muscle-eye-brain-GMPPB related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 14","type":"related"}],"termid":"MONDO:0014140","terms_by_termid":{"MONDO:0014140":null},"xrefs":{"Monarch":{"xref_id":"0014140"}}}


id: PBO:0111329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome bigenesis rRNA methyltransferase Spb1","termid":"PBO:0111329"}


id: PBO:0113067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; involved in the recognition and initial import steps for all mitochondrially-directed proteins, acting as a receptor for incoming precursor proteins; moonlighting role as a transcriptional regulator of mitochondrial proteins; age-dependent reduction in Tom70p results in mitochondrial dysfunction, a hallmark of aging; localizes to mitochondria–ER contact sites; TOM70 has a paralog, TOM71, that arose from the whole genome duplication","termid":"PBO:0113067"}


id: MONDO:0000017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete deafness, autosomal recessive (obsolete MONDO:0000017)","termid":"MONDO:0000017","xrefs":{"Monarch":{"xref_id":"0000017"}}}


id: GO:0050318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: digallate + H2O = 2 gallate + H+.","definition_xrefs":["RHEA:16365","EC:3.1.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"tannase activity","secondary_identifiers":["MetaCyc:TANNASE-RXN","KEGG_REACTION:R00053"],"synonyms":[{"name":"tannase S","type":"related"},{"name":"tannin acetylhydrolase activity","type":"related"},{"name":"tannin acylhydrolase activity","type":"related"}],"termid":"GO:0050318"}


id: GO:0060669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the embryonic placenta is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic placenta morphogenesis","termid":"GO:0060669"}


id: FYPO:0003578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuolar transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal vacuolar transport","synonyms":[{"name":"vacuolar transport: abnormal","type":"related"}],"termid":"FYPO:0003578"}


id: PBO:0003609
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.1.1","termid":"PBO:0003609"}


id: GO:0030923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cluster of several metal atoms, including manganese or calcium, with one or more bridging (mu-bond) oxygen atoms; amino acids residues in proteins that may ligate the metal oxygen cluster are histidine, aspartate, and glutamate.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete metal incorporation into metallo-oxygen cluster (obsolete GO:0030923)","termid":"GO:0030923"}


id: GO:0071561
data:
  {"annotated_genes":["SJAG_01116","SJAG_04552","SJAG_04221","SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77013,106084,106783,114944],"is_not":false,"summary":null,"term":"GO:0071561"}]},"cv_name":"cellular_component","definition":"An organelle membrane contact site formed between the vacuole membrane and the outer nuclear membrane. In S. cerevisiae these contacts are mediated through direct physical interaction between Vac8p and Nvj1p.","definition_xrefs":["GOC:jp","PMID:16709156","PMID:16806880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01116":null,"SJAG_01329":null,"SJAG_04221":null,"SJAG_04552":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nucleus-vacuole junction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NV junction","type":"exact"},{"name":"NVJ","type":"exact"},{"name":"nucleus-vacuole membrane contact site","type":"exact"}],"termid":"GO:0071561","terms_by_termid":{"GO:0071561":null}}


id: MONDO:0004441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal carcinoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian embryonal carcinoma","termid":"MONDO:0003581"},{"relation_name":"is_a","term_name":"pediatric ovarian germ cell tumor","termid":"MONDO:0003760"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"childhood gonadal germ cell tumor","termid":"MONDO:0020577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood ovarian embryonal carcinoma","secondary_identifiers":["UMLS:C1332989","DOID:8036","MEDGEN:232352","NCIT:C6546"],"synonyms":[{"name":"childhood embryonal carcinoma of ovary","type":"exact"},{"name":"childhood embryonal carcinoma of the ovary","type":"related"},{"name":"ovarian embryonal carcinoma of childhood","type":"exact"},{"name":"paediatric embryonal carcinoma of ovary","type":"exact"},{"name":"paediatric embryonal carcinoma of the ovary","type":"exact"},{"name":"paediatric ovarian embryonal carcinoma","type":"exact"},{"name":"pediatric embryonal carcinoma of ovary","type":"exact"},{"name":"pediatric embryonal carcinoma of the ovary","type":"exact"},{"name":"pediatric ovarian embryonal carcinoma","type":"exact"}],"termid":"MONDO:0004441","xrefs":{"Monarch":{"xref_id":"0004441"}}}


id: PBO:0066577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB pseudogene 1","termid":"PBO:0066577"}


id: MONDO:0022907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous sclerosis","termid":"MONDO:0022907","xrefs":{"Monarch":{"xref_id":"0022907"}}}


id: PBO:0039100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 4","termid":"PBO:0039100"}


id: GO:0034286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a maltose stimulus.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to maltose","synonyms":[{"name":"response to maltose stimulus","type":"exact"}],"termid":"GO:0034286"}


id: MONDO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant ovarian germ cell neoplasm (obsolete MONDO:0002231)","termid":"MONDO:0002231","xrefs":{"Monarch":{"xref_id":"0002231"}}}


id: GO:0031220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-maltotetraose + phosphate = alpha-D-glucose 1-phosphate + alpha-maltotriose.","definition_xrefs":["PMID:10348846","RHEA:29691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"maltodextrin phosphorylase activity","secondary_identifiers":["MetaCyc:RXN0-5182"],"termid":"GO:0031220"}


id: GO:0009046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of the D-alanyl-D-alanine bond in (Ac)2-L-lysyl-D-alanyl-D-alanine.","definition_xrefs":["EC:3.4.17.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallocarboxypeptidase activity","termid":"GO:0004181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0003674","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"zinc D-Ala-D-Ala carboxypeptidase activity","secondary_identifiers":["MetaCyc:3.4.17.14-RXN"],"synonyms":[{"name":"D-alanyl-D-alanine hydrolase activity","type":"related"},{"name":"D-alanyl-D-alanine-cleaving carboxypeptidase activity","type":"related"},{"name":"DD-carboxypeptidase","type":"broad"},{"name":"DD-carboxypeptidase-transpeptidase activity","type":"related"},{"name":"G enzyme","type":"related"},{"name":"Zn(2+) G peptidase activity","type":"related"},{"name":"Zn2+ G peptidase activity","type":"related"}],"termid":"GO:0009046"}


id: MONDO:0005764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm composed of spindle to ovoid cells which have morphologic and immunophenotypic characteristics of follicular dendritic cells. It affects lymph nodes and other sites including the tonsils, gastrointestinal tract, spleen, liver, soft tissues, skin, and oral cavity. It usually behaves as a low grade sarcoma. Treatment options include complete surgical removal of the tumor with or without adjuvant chemotherapy or radiotherapy. Recurrences have been reported in up to half of the cases.","definition_xrefs":["NCIT:C9281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated mesenchymal tumor","termid":"MONDO:0017345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"follicular dendritic cell sarcoma","secondary_identifiers":["icd11.foundation:15445528","ICDO:9758/3","UMLS:C1260325","GARD:19081","icd11.foundation:149373156","ICDO:9758/1","MEDGEN:220355","NANDO:2200034","MESH:D054740","ONCOTREE:FDCS","Orphanet:86902","DOID:6262","EFO:0007276"],"synonyms":[{"name":"follicular Dendritic cell sarcoma","type":"exact"},{"name":"follicular Dendritic cell sarcoma/tumor","type":"exact"},{"name":"follicular dendritic cell sarcoma","type":"exact"},{"name":"follicular dendritic cell tumor","type":"exact"},{"name":"follicular dendritic cell tumour","type":"exact"},{"name":"sarcoma of follicular dendritic cell","type":"exact"}],"termid":"MONDO:0005764","xrefs":{"Monarch":{"xref_id":"0005764"}}}


id: GO:0103092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(7'-methylthio)heptylmalate = 3-(7'-methylthio)heptylmalate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthioalkylmalate isomerase activity (obsolete GO:0103092)","termid":"GO:0103092"}


id: FYPO:0000731
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119354,119355],"is_not":false,"summary":null,"term":"FYPO:0000731"},{"annotations":[119333,119326,119337,119325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex","termid":"FYPO:0001373"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal protein localization to medial cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"abnormal protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0000731","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: GO:0016815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a nitrile, a compound containing the cyano radical, -CN.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles","secondary_identifiers":["EC:3.5.5.-"],"termid":"GO:0016815"}


id: GO:1902328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication initiation that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication initiation","termid":"GO:1902292"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"bacterial-type DNA replication initiation","synonyms":[{"name":"DNA endoreduplication initiation involved in bacterial-type DNA replication","type":"narrow"},{"name":"DNA re-replication initiation involved in bacterial-type DNA replication","type":"narrow"},{"name":"DNA replication initiation involved in bacterial-type DNA replication","type":"exact"},{"name":"DNA-dependent DNA replication initiation involved in bacterial-type DNA replication","type":"exact"}],"termid":"GO:1902328"}


id: GO:0032838
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All of the contents of a plasma membrane bounded cell projection, excluding the plasma membrane surrounding the projection.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic region","termid":"GO:0099568"},{"relation_name":"part_of","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plasma membrane bounded cell projection cytoplasm","termid":"GO:0032838"}


id: PBO:0069862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1149, pseudogene","termid":"PBO:0069862"}


id: PBO:0070376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 2 pseudogene 1","termid":"PBO:0070376"}


id: MOD:00952
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)acetic acid and the loss of a water molecule.","definition_xrefs":["RESID:AA0441#ASP","PubMed:10801322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid (Asp)","synonyms":[{"name":"(2-aminosuccinimidyl)acetic acid","type":"exact"},{"name":"(3-amino-2,5-dioxo-1-pyrrolidinyl)acetic acid","type":"exact"},{"name":"CROSSLNK (2-aminosuccinimidyl)acetic acid (Asp-Gly)","type":"exact"},{"name":"N-(2-aminosuccinyl)glycine","type":"exact"},{"name":"[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]acetic acid","type":"exact"},{"name":"anhydroaspartyl glycine","type":"exact"},{"name":"aspartimide glycine","type":"exact"}],"termid":"MOD:00952"}


id: GO:0035628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cystic duct over time, from its formation to the mature structure. The cystic duct runs from the gallbladder to the common bile duct.","definition_xrefs":["PMID:20614624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct development","termid":"GO:0061009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cystic duct development","termid":"GO:0035628"}


id: MONDO:0006370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pineoblastoma (obsolete MONDO:0006370)","termid":"MONDO:0006370","xrefs":{"Monarch":{"xref_id":"0006370"}}}


id: PBO:0074884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 62B","termid":"PBO:0074884"}


id: PBO:0051238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-46-1 (pseudogene)","termid":"PBO:0051238"}


id: PBO:0091114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Ost4","termid":"PBO:0091114"}


id: PBO:0083791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in vesicle-mediated ER to Golgi transport; binds membranes and functions during vesicle docking to the Golgi; required for assembly of the ER-to-Golgi SNARE complex","termid":"PBO:0083791"}


id: PBO:0043149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 17","termid":"PBO:0043149"}


id: PBO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein Lhs1 (predicted)","termid":"PBO:0000254"}


id: PBO:0003485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor two Cft2/polyadenylation factor CPSF-73 (predicted)","termid":"PBO:0003485"}


id: GO:0033192
data:
  {"annotated_genes":["SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79314],"is_not":false,"summary":null,"term":"GO:0033192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate, dependent on the presence of calcium-bound calmodulin.","definition_xrefs":["GOC:mah","PMID:15359118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-dependent protein serine/threonine phosphatase activity","termid":"GO:0004723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016787","GO:0004721","GO:0016788"],"is_obsolete":false,"name":"calmodulin-dependent protein phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2730849","Reactome:R-HSA-4551451"],"synonyms":[{"name":"Ca2+/CaM-dependent protein phosphatase activity","type":"related"},{"name":"calcineurin activity","type":"narrow"},{"name":"calcium- and calmodulin-dependent protein phosphatase activity","type":"exact"},{"name":"calcium/calmodulin-dependent protein phosphatase activity","type":"exact"}],"termid":"GO:0033192","terms_by_termid":{"GO:0033192":null}}


id: GO:0019031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer of a virion that surrounds the protein capsid. May also contain glycoproteins.","definition_xrefs":["Wikipedia:Viral_envelope","ISBN:0781718325","GOC:bf","GOC:bm","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral membrane","termid":"GO:0036338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral envelope","synonyms":[{"name":"viral glycoprotein","type":"related"},{"name":"viral outside membrane","type":"exact"}],"termid":"GO:0019031"}


id: PBO:0058273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-2","termid":"PBO:0058273"}


id: PBO:0082569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Checkpoint protein; involved in the activation of the DNA damage and meiotic pachytene checkpoints; subunit of a clamp loader that loads Rad17p-Mec3p-Ddc1p onto DNA; homolog of human and S. pombe Rad17 protein","termid":"PBO:0082569"}


id: MONDO:0015432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 12 syndrome is a rare chromosomal anomaly syndrome with a highly variable phenotype principally characterized by postnatal growth retardation, variable degrees of developmental delay and intellectual disability, microcephaly and facial dysmorphism (incl. epicanthal folds, low-set, cupped ears, prominent nose with flat nasal bridge, high arched palate, micrognathia). Skeletal abnormalities (e.g. pectus excavatum, clinodactyly), congenital heart malformations, cryptorchidism, café-au-lait spots and epilepsy have also been reported.","definition_xrefs":["Orphanet:1439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 12 disorder","termid":"MONDO:0700019"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 12","secondary_identifiers":["GARD:1325","MEDGEN:162879","UMLS:C0795843","MESH:C538298"],"synonyms":[{"name":"R12","type":"related"},{"name":"Ring 12","type":"related"},{"name":"Ring chromosome 12 syndrome","type":"related"},{"name":"Ring chromosome type 12","type":"exact"},{"name":"chromosome 12 ring","type":"related"}],"termid":"MONDO:0015432","xrefs":{"Monarch":{"xref_id":"0015432"}}}


id: FYPO:0000992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3-phosphate measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"altered cellular phosphatidylinositol-3-phosphate level","synonyms":[{"name":"abnormal cellular phosphatidylinositol-3-phosphate level","type":"exact"},{"name":"altered PI-3-P accumulation","type":"related"},{"name":"altered cellular PI(3)P level","type":"exact"},{"name":"altered cellular PI-3-P level","type":"exact"},{"name":"altered cellular phosphatidylinositol-3-phosphate level during mitotic cell cycle","type":"related"},{"name":"altered cellular phosphatidylinositol-3-phosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0000992"}


id: GO:1901724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in kidney development.","definition_xrefs":["PMID:18182616","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in kidney development","synonyms":[{"name":"activation of cell proliferation involved in kidney development","type":"narrow"},{"name":"up regulation of cell proliferation involved in kidney development","type":"exact"},{"name":"up-regulation of cell proliferation involved in kidney development","type":"exact"},{"name":"upregulation of cell proliferation involved in kidney development","type":"exact"}],"termid":"GO:1901724"}


id: GO:0015539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: hexuronate(out) + cation(out) = hexuronate(in) + cation(in). The hexuronate may be glucuronate or galacturonate.","definition_xrefs":["TC:2.A.1.14.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"hexuronate:monoatomic cation symporter activity","synonyms":[{"name":"hexuronate (glucuronate/galacturonate) porter activity","type":"narrow"},{"name":"hexuronate porter activity","type":"related"},{"name":"hexuronate:cation symporter activity","type":"broad"}],"termid":"GO:0015539"}


id: GO:0018418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of nickel into a 3Fe-2S complex by tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"nickel incorporation into metallo-sulfur cluster","termid":"GO:0018414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"nickel incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","synonyms":[{"name":"nickel incorporation into iron-sulphur cluster via tris-L-cysteinyl L-cysteine persulphido L-glutamato L-histidino L-serinyl nickel triiron disulphide trioxide","type":"exact"}],"termid":"GO:0018418"}


id: GO:0010973
data:
  {"annotated_genes":["SJAG_01805","SJAG_01114","SJAG_01188","SJAG_03704","SJAG_05290","SJAG_03048","SJAG_00082","SJAG_04776","SJAG_04666","SJAG_03631","SJAG_00514","SJAG_03936","SJAG_03342","SJAG_04468"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77688,106805,106142,93567,117634,92182,89629,104942,113109,115213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[89763,110274,87299,102137,93571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of division septum formation. division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["PMID:19959363","PMID:22786806","PMID:21246752","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of division septum assembly","termid":"GO:0032955"},{"relation_name":"is_a","term_name":"positive regulation of cell septum assembly","termid":"GO:1901893"},{"relation_name":"positively_regulates","term_name":"division septum assembly","termid":"GO:0000917"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"positive regulation of division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1901912","GO:1902470"],"synonyms":[{"name":"positive regulation of division septum formation","type":"exact"},{"name":"positive regulation of division septum formation involved in cell cycle cytokinesis","type":"exact"},{"name":"upregulation of mitotic division septum assembly","type":"exact"}],"termid":"GO:0010973","terms_by_termid":{"GO:0031031":null,"GO:0140281":null}}


id: GO:0031485
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XV myosin heavy chain and associated light chains. Myosin XV is single headed, and has a large extension (1200aa) at the N-terminus of the motor domain, two IQ motifs and a tail with a similar domain structure to that of the tail of myosin VII.","definition_xrefs":["PMID:10722873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"myosin XV complex","termid":"GO:0031485"}


id: PR:O59668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RMD5 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LisH domain-containing protein C29A3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.03c","secondary_identifiers":["UniProtKB:O59668"],"synonyms":[{"name":"Spom972h-RMND5A","type":"exact"}],"termid":"PR:O59668"}


id: GO:0098866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of the membrane of a multivesicular body with the apical plasma membrane, resulting in release of exosomes from the cell.","definition_xrefs":["PMID:26459596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion to plasma membrane","termid":"GO:0099500"},{"relation_name":"part_of","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"multivesicular body fusion to apical plasma membrane","termid":"GO:0098866"}


id: PBO:0090991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taz1-like protein","termid":"PBO:0090991"}


id: PBO:0004159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-isopropylmalate synthase Leu3","termid":"PBO:0004159"}


id: PBO:0079865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase pseudogene 2","termid":"PBO:0079865"}


id: MONDO:0008461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splenomegaly syndrome with splenic Germinal center hypoplasia and reduced circulating T helper cells","secondary_identifiers":["OMIM:183350","MEDGEN:357126","MESH:C566666","UMLS:C1866744"],"synonyms":[{"name":"splenomegaly syndrome with splenic Germinal center hypoplasia and reduced circulating T helper cells","type":"exact"}],"termid":"MONDO:0008461","xrefs":{"Monarch":{"xref_id":"0008461"}}}


id: GO:1903448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of geraniol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","GOC:di","PMID:23200656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol biosynthetic process","termid":"GO:0016094"},{"relation_name":"is_a","term_name":"monoterpenoid biosynthetic process","termid":"GO:0016099"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"geraniol metabolic process","termid":"GO:1903446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"geraniol biosynthetic process","synonyms":[{"name":"geraniol anabolism","type":"exact"},{"name":"geraniol biosynthesis","type":"exact"},{"name":"geraniol formation","type":"exact"},{"name":"geraniol synthesis","type":"exact"}],"termid":"GO:1903448"}


id: MOD:01952
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-threonine residue and an L-glutamine residue with an ester bond releasing ammonia to form O-(L-isoglutamyl)-L-threonine.","definition_xrefs":["RESID:AA0536#TQX","PubMed:17051152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-threonine","termid":"MOD:01979"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-threonine (Gln-Thr)","synonyms":[{"name":"(2S)-2-amino-5-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-5-oxopentanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-4-amino-4-carboxybutanoyl]oxy)-propanoic acid","type":"exact"},{"name":"5-(threon-O3-yl)glutamate","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)threonine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-threonine","type":"exact"},{"name":"O3-(isoglutamyl)threonine","type":"exact"}],"termid":"MOD:01952"}


id: PBO:0062109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 7 pseudogene","termid":"PBO:0062109"}


id: PBO:0065105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAR2B antisense RNA 1","termid":"PBO:0065105"}


id: PBO:0059865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 2","termid":"PBO:0059865"}


id: MOD:01820
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a cysteine sulhydryl hydrogen with an isotope tagged sulfhydryl reagent group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}


id: MONDO:0054591
data:
  {"annotated_genes":["SJAG_03321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85289],"is_not":false,"summary":null,"term":"MONDO:0054591"}]},"cv_name":"mondo","definition":"A neurodevelopmental disorder characterized by delayed psychomotor development, intellectual disability, behavioral disorders, mild craniofacial anomalies, and variable congenital defects of the cardiac and/or urogenital systems.","definition_xrefs":["OMIM:617516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Stankiewicz-Isidor syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4479599","MEDGEN:1375936"],"synonyms":[{"name":"STISS","type":"related"},{"name":"Stankiewicz-Isidor syndrome","type":"exact"}],"termid":"MONDO:0054591","terms_by_termid":{"MONDO:0054591":null},"xrefs":{"Monarch":{"xref_id":"0054591"}}}


id: PBO:0047787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 4","termid":"PBO:0047787"}


id: GO:0035479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of angioblasts from the lateral mesoderm to the midline which occurs as part of the formation of the early midline vasculature.","definition_xrefs":["GOC:dgh","PMID:11861480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angioblast cell migration","termid":"GO:0035476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell migration from lateral mesoderm to midline","termid":"GO:0035479"}


id: GO:0160086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a polar microtubule.","definition_xrefs":["PMID:34080538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle microtubule","termid":"GO:1902889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to polar microtubule","termid":"GO:0160086"}


id: PBO:0071623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 41","termid":"PBO:0071623"}


id: FYPO:0003542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle pole body","termid":"FYPO:0002771"},{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000138","FYPO:0000054"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle pole body","synonyms":[{"name":"abolished protein localisation to meiotic spindle pole body","type":"exact"},{"name":"abolished protein localization to meiotic SPB","type":"exact"},{"name":"protein localization to meiotic spindle pole body abolished","type":"exact"}],"termid":"FYPO:0003542"}


id: PBO:0066374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDM1 pseudogene 1","termid":"PBO:0066374"}


id: GO:0075224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"positive regulation of sporangium development","termid":"GO:0075311"},{"relation_name":"positively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporangium germination","synonyms":[{"name":"positive regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075224"}


id: GO:0019048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in the structure or processes of its host organism.","definition_xrefs":["ISBN:0781718325","GOC:bf","UniProtKB-KW:KW-0945","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host process (obsolete GO:0019048)","secondary_identifiers":["VZ:886"],"synonyms":[{"name":"disruption by virus of host cell","type":"related"},{"name":"host-virus interaction","type":"exact"},{"name":"modulation by virus of host anatomical structure or process","type":"related"},{"name":"modulation by virus of host anatomy or process","type":"exact"},{"name":"modulation by virus of host morphology or physiology","type":"related"},{"name":"viral interaction with host","type":"exact"},{"name":"viral-host process","type":"exact"},{"name":"virus-host interaction","type":"broad"},{"name":"virus-host process","type":"exact"}],"termid":"GO:0019048"}


id: GO:0075248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aeciospore formation","termid":"GO:0075248"}


id: PBO:0038390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_severity","termid":"PBO:0038390"}


id: GO:0032558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adenyl deoxyribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide binding","termid":"GO:0032554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"}


id: GO:0047842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate + H+ = L-xylulose + CO2.","definition_xrefs":["RHEA:11084","EC:4.1.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dehydro-L-gulonate decarboxylase activity","secondary_identifiers":["Reactome:R-HSA-5662473","MetaCyc:DEHYDRO-L-GULONATE-DECARBOXYLASE-RXN","KEGG_REACTION:R01905"],"synonyms":[{"name":"3-dehydro-L-gulonate carboxy-lyase (L-xylulose-forming)","type":"related"},{"name":"3-dehydro-L-gulonate carboxy-lyase activity","type":"related"},{"name":"3-keto-L-gulonate decarboxylase activity","type":"related"},{"name":"keto-L-gulonate decarboxylase activity","type":"related"}],"termid":"GO:0047842"}


id: PR:O60070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A set1/Ash2 histone methyltransferase complex subunit ASH2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03834","PRO:DNx","PANTHER:PTHR10598:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component ash2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.08c","secondary_identifiers":["UniProtKB:O60070"],"synonyms":[{"name":"COMPASS component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Lid2C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ASH2L","type":"exact"},{"name":"complex proteins associated with set1 protein ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lid2 complex component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60070"}


id: MONDO:0006158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that arises from the colon or rectum.","definition_xrefs":["NCIT:C96503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"},{"relation_name":"is_a","term_name":"colorectal lymphoma","termid":"MONDO:0024656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"colorectal diffuse large B-cell lymphoma","secondary_identifiers":["EFO:1000191","MEDGEN:474460","UMLS:C3272827"],"synonyms":[{"name":"colorectal DLBCL","type":"exact"},{"name":"colorectal diffuse large B-cell lymphoma","type":"exact"},{"name":"colorectum diffuse large B-cell lymphoma","type":"exact"},{"name":"diffuse large B-cell lymphoma of colorectum","type":"exact"}],"termid":"MONDO:0006158","xrefs":{"Monarch":{"xref_id":"0006158"}}}


id: MOD:01850
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links either two L-cysteine residues, or an L-cysteine residue and an L-serine residue by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["RESID:AA0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-cysteine","termid":"MOD:01851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"}],"termid":"MOD:01850"}


id: GO:0033420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CUG codon-amino acid adaptor activity","synonyms":[{"name":"CTG codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033420"}


id: PBO:0117164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF2 antisense RNA 3","termid":"PBO:0117164"}


id: PBO:0068966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 210, pseudogene","termid":"PBO:0068966"}


id: MONDO:0012765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 2","secondary_identifiers":["MESH:C567452","GARD:16453","MEDGEN:1648459","OMIM:611944","DOID:0070211","UMLS:C4747568"],"synonyms":[{"name":"LMPH1B","type":"exact"},{"name":"lymphedema, hereditary, 1B","type":"exact"}],"termid":"MONDO:0012765","xrefs":{"Monarch":{"xref_id":"0012765"}}}


id: PBO:0002678
data:
  {"annotated_genes":["SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"EC numbers":[{"annotations":[56221],"is_not":false,"summary":null,"term":"PBO:0002678"}]},"cv_name":"EC numbers","gene_count":1,"genes_by_uniquename":{"SJAG_MIT03":null},"genotype_count":0,"is_obsolete":false,"name":"1.10.2.2","termid":"PBO:0002678","terms_by_termid":{"PBO:0002678":null}}


id: MONDO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hordeolum that results from infection of a meibomian gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"hordeolum","termid":"MONDO:0005800"},{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"},{"relation_name":"is_a","term_name":"skin appendage disorder","termid":"MONDO:0024481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"internal hordeolum","secondary_identifiers":["MEDGEN:43227","DOID:9908","UMLS:C0085690","SCTID:414521009","ICD9:373.12"],"synonyms":[{"name":"hordeolum internum","type":"related"},{"name":"hordeolum of tarsal gland","type":"exact"},{"name":"infected chalazion","type":"related"},{"name":"infected cyst of meibomian gland","type":"related"},{"name":"infected meibomian cyst","type":"related"},{"name":"infection of meibomian gland","type":"related"},{"name":"internal hordeolum","type":"exact"},{"name":"meibomian adenitis","type":"related"},{"name":"tarsal gland hordeolum","type":"exact"}],"termid":"MONDO:0004917","xrefs":{"Monarch":{"xref_id":"0004917"}}}


id: PBO:0080503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wound and keratinocyte migration associated lncRNA 2","termid":"PBO:0080503"}


id: PBO:0016948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Pos1","termid":"PBO:0016948"}


id: MONDO:0400000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of excessive bacteria in the small intestine that can result from result from failure of the gastric acid barrier, failure of small intestinal motility, anatomic alterations, or impairment of systemic and local immunity.","definition_xrefs":["PMID:21960820","PMID:23614961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestinal bacterial overgrowth","secondary_identifiers":["UMLS:C3160854","MEDGEN:1708316"],"synonyms":[{"name":"SIBO","type":"exact"}],"termid":"MONDO:0400000","xrefs":{"Monarch":{"xref_id":"0400000"}}}


id: PBO:0050086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 6","termid":"PBO:0050086"}


id: GO:0052745
data:
  {"annotated_genes":["SJAG_03739","SJAG_04067","SJAG_04545","SJAG_01970","SJAG_00063","SJAG_04870","SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88481,106673,106674],"is_not":false,"summary":null,"term":"GO:0052745"},{"annotations":[77037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008934"},{"annotations":[108049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990651"},{"annotations":[108050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990649"},{"annotations":[108051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052659"},{"annotations":[115286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052829"},{"annotations":[73595,74784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052658"},{"annotations":[115287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004441"},{"annotations":[108053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990650"},{"annotations":[108054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990640"},{"annotations":[108055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990648"},{"annotations":[108056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030487"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphate(n) + H2O = inositol phosphate(n-1) + phosphate. This reaction is the removal of a phosphate group from an inositol phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_01702":null,"SJAG_01970":null,"SJAG_03739":null,"SJAG_04067":null,"SJAG_04545":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0052745","terms_by_termid":{"GO:0004441":null,"GO:0008934":null,"GO:0030487":null,"GO:0052658":null,"GO:0052659":null,"GO:0052745":null,"GO:0052829":null,"GO:1990640":null,"GO:1990648":null,"GO:1990649":null,"GO:1990650":null,"GO:1990651":null}}


id: GO:0046786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of organizing and assembling viral replication proteins in preparation for viral replication.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral replication complex formation and maintenance","termid":"GO:0046786"}


id: MONDO:0958174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nevoid basal cell carcinoma syndrome","termid":"MONDO:0007187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"basal cell nevus syndrome 1","secondary_identifiers":["OMIM:109400"],"termid":"MONDO:0958174","xrefs":{"Monarch":{"xref_id":"0958174"}}}


id: GO:1905388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a beta-carotene stimulus.","definition_xrefs":["PMID:16771696","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to beta-carotene","termid":"GO:1905387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to beta-carotene","synonyms":[{"name":"cellular response to beta,beta-carotene","type":"exact"}],"termid":"GO:1905388"}


id: FYPO:0003546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA damage measured in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage","synonyms":[{"name":"increased number of DNA lesions","type":"related"},{"name":"increased spontaneous DNA lesions","type":"related"}],"termid":"FYPO:0003546"}


id: MONDO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucopolysaccharidosis type 4 (obsolete MONDO:0001587)","termid":"MONDO:0001587","xrefs":{"Monarch":{"xref_id":"0001587"}}}


id: MOD:00926
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from Unimod Non-standard residue. OBSOLETE because not an amino acid modification. From Unimod not an approved entry.","definition_xrefs":["Unimod:493","PubMed:11225353"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00926 Bisphenol A diglycidyl ether derivative (obsolete MOD:00926)","synonyms":[{"name":"BADGE","type":"related"},{"name":"Bisphenol A diglycidyl ether derivative","type":"related"}],"termid":"MOD:00926"}


id: GO:0046279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3,4-dihydroxybenzoate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"3,4-dihydroxybenzoate metabolic process","termid":"GO:0046278"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3,4-dihydroxybenzoate biosynthetic process","synonyms":[{"name":"protocatechuate anabolism","type":"exact"},{"name":"protocatechuate biosynthesis","type":"exact"},{"name":"protocatechuate biosynthetic process","type":"exact"},{"name":"protocatechuate formation","type":"exact"},{"name":"protocatechuate synthesis","type":"exact"}],"termid":"GO:0046279"}


id: PBO:0063731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHACTR3 antisense RNA 1","termid":"PBO:0063731"}


id: MONDO:0013584
data:
  {"annotated_genes":["SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85704],"is_not":false,"summary":null,"term":"MONDO:0013584"}]},"cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by adult onset of progressive peripheral sensory loss, progressive hearing impairment, and early-onset dementia that has material basis in heterozygous mutation in the DNMT1 gene on chromosome 19p13.","definition_xrefs":["DOID:0070158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy type 1","termid":"MONDO:0018213"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0002039","MONDO:0005244","MONDO:0002525"],"is_obsolete":false,"name":"hereditary sensory neuropathy-deafness-dementia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1903","GARD:11927","Orphanet:456318","UMLS:C3279885","MEDGEN:481515","MESH:C580162","OMIM:614116"],"synonyms":[{"name":"DNMT1-related dementia, deafness, and sensory neuropathy","type":"related"},{"name":"HSAN1E","type":"exact"},{"name":"HSN 1E","type":"related"},{"name":"HSN1E","type":"exact"},{"name":"HSNIE","type":"related"},{"name":"Hereditary Sensory and Autonomic Neuropathy Type 1E","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 1E","type":"related"},{"name":"hereditary sensory neuropathy type 1E","type":"related"},{"name":"hereditary sensory neuropathy type IE","type":"exact"},{"name":"hereditary sensory neuropathy with hearing loss and dementia","type":"related"},{"name":"hereditary sensory neuropathy-sensorineural hearing loss-dementia syndrome","type":"exact"},{"name":"neuropathy, hereditary sensory, type 1E","type":"related"},{"name":"neuropathy, hereditary sensory, type IE","type":"related"},{"name":"neuropathy, hereditary sensory, with hearing loss and dementia","type":"related"}],"termid":"MONDO:0013584","terms_by_termid":{"MONDO:0013584":null},"xrefs":{"Monarch":{"xref_id":"0013584"}}}


id: MONDO:0005486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tooth disease characterized by failure to develop one or more missing teeth.","definition_xrefs":["DOID:0050591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis","secondary_identifiers":["ICD9:520.0","SCTID:64969001","EFO:0005410","GARD:16908","UMLS:C0020608","icd11.foundation:1559717619","MESH:D000848","ICD10CM:K00.0","Orphanet:99798","OMIMPS:106600","Orphanet:2227","SCTID:16958000","MEDGEN:43794"],"synonyms":[{"name":"familial tooth agenesis","type":"exact"},{"name":"hypodontia","type":"exact"},{"name":"oligodontia","type":"narrow"},{"name":"selective tooth agenesis","type":"exact"},{"name":"tooth agenesis, selective","type":"exact"}],"termid":"MONDO:0005486","xrefs":{"Monarch":{"xref_id":"0005486"}}}


id: PATO:0002398
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0002398 <new term> (obsolete PATO:0002398)","termid":"PATO:0002398"}


id: PBO:0053184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LENG8 antisense RNA 1","termid":"PBO:0053184"}


id: GO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an adaptive immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adaptive immune response","synonyms":[{"name":"activation of adaptive immune response","type":"narrow"},{"name":"stimulation of adaptive immune response","type":"narrow"},{"name":"up regulation of adaptive immune response","type":"exact"},{"name":"up-regulation of adaptive immune response","type":"exact"},{"name":"upregulation of adaptive immune response","type":"exact"}],"termid":"GO:0002821"}


id: PBO:0003848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex gamma subunit Cct3","termid":"PBO:0003848"}


id: GO:0043066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"negatively_regulates","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process","secondary_identifiers":["Reactome:R-HSA-193639","GO:0006916","Reactome:R-HSA-211733","Reactome:R-HSA-211728"],"synonyms":[{"name":"anti-apoptosis","type":"exact"},{"name":"apoptosis inhibitor activity","type":"related"},{"name":"down regulation of apoptosis","type":"exact"},{"name":"down-regulation of apoptosis","type":"exact"},{"name":"downregulation of apoptosis","type":"exact"},{"name":"inhibition of apoptosis","type":"narrow"},{"name":"negative regulation of apoptosis","type":"narrow"},{"name":"pro-survival","type":"related"}],"termid":"GO:0043066"}


id: PBO:0088483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron biosynthesis protein Sib3","termid":"PBO:0088483"}


id: PBO:0051104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-17 (pseudogene)","termid":"PBO:0051104"}


id: PBO:0035695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_or_involved_in_regulation_of","termid":"PBO:0035695"}


id: PBO:0078146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 25","termid":"PBO:0078146"}


id: GO:0072201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell proliferation","termid":"GO:0072201"}


id: PBO:0026629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_MCB_promoters_during_vegetative_growth","termid":"PBO:0026629"}


id: GO:0072007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesangial cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"pericyte cell differentiation","termid":"GO:1904238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell differentiation","termid":"GO:0072007"}


id: GO:0008020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with incidental electromagnetic radiation, particularly visible light, and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:dph","ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"photoreceptor activity","termid":"GO:0009881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled photoreceptor activity","secondary_identifiers":["GO:0004975"],"synonyms":[{"name":"G protein coupled photoreceptor activity","type":"exact"},{"name":"G-protein coupled photoreceptor activity","type":"exact"},{"name":"photoreceptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0008020"}


id: GO:0048451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the petal. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"petal morphogenesis","termid":"GO:0048446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal formation","secondary_identifiers":["GO:0048419"],"termid":"GO:0048451"}


id: GO:0045034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The asymmetrical division of a neuroblast, the neural precursor in the central nervous system, giving rise to another neuroblast and a ganglion mother cell.","definition_xrefs":["PMID:11250167","PMID:11163136"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroblast division (obsolete GO:0045034)","synonyms":[{"name":"neuroblast cell division","type":"exact"},{"name":"neuroblast division","type":"exact"},{"name":"neuroblast division (sensu Nematoda and Protostomia)","type":"exact"},{"name":"neuroblast division (sensu Vertebrata)","type":"exact"}],"termid":"GO:0045034"}


id: GO:0034656
data:
  {"annotated_genes":["SJAG_01673","SJAG_02580","SJAG_00957","SJAG_01359","SJAG_02959","SJAG_04927","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87347,87346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[69702,69542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[90836,111919,75036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[90417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleobase-containing small molecule: a nucleobase, a nucleoside, or a nucleotide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound catabolic process","termid":"GO:0034655"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_03771":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleobase-containing small molecule catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8956319"],"synonyms":[{"name":"nucleobase, nucleoside and nucleotide breakdown","type":"exact"},{"name":"nucleobase, nucleoside and nucleotide catabolism","type":"exact"},{"name":"nucleobase, nucleoside and nucleotide degradation","type":"exact"}],"termid":"GO:0034656","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0009972":null,"GO:0046135":null}}


id: GO:0051048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a substance from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of secretion","synonyms":[{"name":"down regulation of secretion","type":"exact"},{"name":"down-regulation of secretion","type":"exact"},{"name":"downregulation of secretion","type":"exact"},{"name":"inhibition of secretion","type":"narrow"}],"termid":"GO:0051048"}


id: PBO:0017441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_expression_of","termid":"PBO:0017441"}


id: PBO:0078907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 16-1","termid":"PBO:0078907"}


id: MONDO:0044762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diarrhea that results from increased motility in the bowel; significant increases in bowel motility can deliver excessively large volumes of stool to the colon. Diarrhea can result when the maximum colonic absorptive capacity of 4 liters a day is exceeded. Also, an alteration in colonic motility such that bowel contents are emptied before adequate absorption can occur has been offered as a possible explanation for the diarrhea associated with irritable bowel disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease secondary to altered bowel motility","termid":"MONDO:0000251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrheal disease secondary to increased bowel motility","secondary_identifiers":["DOID:0050131"],"synonyms":[{"name":"diarrhea from increased bowel motility","type":"exact"},{"name":"diarrhoea from increased bowel motility","type":"exact"},{"name":"motility-related diarrhea","type":"broad"},{"name":"motility-related diarrhoea","type":"broad"}],"termid":"MONDO:0044762","xrefs":{"Monarch":{"xref_id":"0044762"}}}


id: GO:0014899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in the heart, in which a decrease in cell mass and then in heart size occurs due to shrinking of the individual cells. The shrinkage is caused by protein degradation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle adaptation","termid":"GO:0014887"},{"relation_name":"is_a","term_name":"striated muscle atrophy","termid":"GO:0014891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle atrophy","termid":"GO:0014899"}


id: GO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of cilia of inner ear epithelial cells, resulting the aggregation of otolith seed particles.","definition_xrefs":["GOC:dph","GOC:krc","PMID:19043402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cilium movement involved in extracellular fluid movement","termid":"GO:0003351"},{"relation_name":"part_of","term_name":"otolith formation","termid":"GO:0032475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cilium movement involved in otolith formation","termid":"GO:0003355"}


id: PBO:0011421
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"may not be protein coding","termid":"PBO:0011421"}


id: PBO:0079154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 14","termid":"PBO:0079154"}


id: PBO:0000936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-mobility group non-histone chromatin protein (predicted)","termid":"PBO:0000936"}


id: GO:1900386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of flavonol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of flavonoid biosynthetic process","termid":"GO:0009963"},{"relation_name":"is_a","term_name":"regulation of flavonol biosynthetic process","termid":"GO:1900384"},{"relation_name":"positively_regulates","term_name":"flavonol biosynthetic process","termid":"GO:0051555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flavonol biosynthetic process","synonyms":[{"name":"activation of flavonol biosynthetic process","type":"narrow"},{"name":"up regulation of flavonol biosynthetic process","type":"exact"},{"name":"up-regulation of flavonol biosynthetic process","type":"exact"},{"name":"upregulation of flavonol biosynthetic process","type":"exact"}],"termid":"GO:1900386"}


id: PBO:0072213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 12","termid":"PBO:0072213"}


id: FYPO:0009056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore microtubule depolymerization, i.e. the removal of tubulin dimers from a kinetochore microtubule, occurs to a lesser extent than normal during anaphase A. Kinetochore microtubule depolymerisation drives chromosome movement during Anaphase A in S. pombe.","definition_xrefs":["PMID:36435910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic spindle microtubule depolymerization during mitotic anaphase A","termid":"FYPO:0005423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased kinetochore microtubule depolymerization during mitotic anaphase A","termid":"FYPO:0009056"}


id: MONDO:0006224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic polyp that arises from the stomach and is characterized by the presence of connective tissue stroma overgrowth and cystic formations.","definition_xrefs":["NCIT:C4373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal hamartoma","termid":"MONDO:0006231"},{"relation_name":"is_a","term_name":"gastric neoplasm","termid":"MONDO:0021085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric hamartomatous polyp","secondary_identifiers":["UMLS:C0341225","EFO:1000271","MEDGEN:90961","SCTID:235685007"],"synonyms":[{"name":"gastric hamartomatous polyp","type":"exact"},{"name":"hamartoma of stomach","type":"exact"},{"name":"hamartoma of the stomach","type":"exact"},{"name":"stomach hamartoma (disease)","type":"exact"}],"termid":"MONDO:0006224","xrefs":{"Monarch":{"xref_id":"0006224"}}}


id: PBO:0111916
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit locus (SURF40 family)","termid":"PBO:0111916"}


id: PBO:0076100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX5 divergent transcript","termid":"PBO:0076100"}


id: GO:0016912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 5 activity (obsolete GO:0016912)","synonyms":[{"name":"SAP kinase 5 activity","type":"exact"},{"name":"SAPK5","type":"exact"}],"termid":"GO:0016912"}


id: PBO:0079779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A complex locus","termid":"PBO:0079779"}


id: PBO:0040544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 2","termid":"PBO:0040544"}


id: MONDO:0011840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the CSRP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1M","secondary_identifiers":["OMIM:607482","UMLS:C1843808","MEDGEN:334498","MESH:C564390","DOID:0110449","GARD:15413"],"synonyms":[{"name":"CMD1M","type":"exact"},{"name":"CSRP3 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1M","type":"related"},{"name":"cardiomyopathy, dilated, type 1M","type":"exact"},{"name":"dilated cardiomyopathy type 1M","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in CSRP3","type":"exact"}],"termid":"MONDO:0011840","xrefs":{"Monarch":{"xref_id":"0011840"}}}


id: PBO:0089255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4452 family conserved fungal protein","termid":"PBO:0089255"}


id: PBO:0078643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 1-1","termid":"PBO:0078643"}


id: PBO:0080616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 53","termid":"PBO:0080616"}


id: MONDO:0015619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A urogenital tract malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic urogenital tract malformation (obsolete MONDO:0015619)","secondary_identifiers":["Orphanet:165704"],"synonyms":[{"name":"isolated urogenital tract malformation","type":"exact"},{"name":"nonsyndromic urogenital tract malformation","type":"exact"}],"termid":"MONDO:0015619","xrefs":{"Monarch":{"xref_id":"0015619"}}}


id: PBO:0062877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthodenticle homeobox 1","termid":"PBO:0062877"}


id: MONDO:0033559
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85632],"is_not":false,"summary":null,"term":"MONDO:0033559"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with seizures and language delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18527","OMIM:619000","MEDGEN:1740295","UMLS:C5436574"],"synonyms":[{"name":"IDDSELD","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH SEIZURES AND LANGUAGE DELAY","type":"related"},{"name":"SETD1B-NDD","type":"exact"},{"name":"SETD1B-Related Neurodevelopmental Disorder","type":"exact"},{"name":"SETD1B-related neurodevelopmental disorder","type":"exact"}],"termid":"MONDO:0033559","terms_by_termid":{"MONDO:0033559":null},"xrefs":{"Monarch":{"xref_id":"0033559"}}}


id: PBO:0039355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase domain containing 1","termid":"PBO:0039355"}


id: MONDO:0020108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune hemolytic anemia (AIHA) is an autoimmune disorder in which various types of auto-antibodies are directed against red blood cells causing their survival to be shortened and resulting in hemolytic anemia.","definition_xrefs":["Orphanet:98375"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare acquired hemolytic anemia (obsolete MONDO:0015911)","termid":"MONDO:0015911"},{"relation_name":"is_a","term_name":"autoimmune disorder of blood","termid":"MONDO:0000602"},{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"autoimmune hemolytic anemia","secondary_identifiers":["GARD:5870","EFO:1001264","MESH:D000744","NORD:774","MEDGEN:1918","UMLS:C0002880","ICD9:283.0","NANDO:2100181","DOID:718","icd11.foundation:1834341306","CSP:0427-1178","MedDRA:10002046","NANDO:1200305","NCIT:C34378","OMIM:205700","SCTID:413603009"],"synonyms":[{"name":"AHA","type":"exact"},{"name":"AIHA","type":"exact"},{"name":"Anemia, Hemolytic, Acquired Autoimmune","type":"exact"},{"name":"acquired autoimmune hemolytic anaemia","type":"related"},{"name":"acquired autoimmune hemolytic anemia","type":"related"},{"name":"anaemia hemolytic autoimmune","type":"related"},{"name":"anemia hemolytic autoimmune","type":"related"},{"name":"anemia, autoimmune hemolytic","type":"related"},{"name":"autoimmune haemolytic anaemia","type":"exact"},{"name":"autoimmune haemolytic anemia","type":"exact"},{"name":"autoimmune hemolytic anemia","type":"exact"},{"name":"familial auto-immune hemolytic anaemia (subtype)","type":"related"},{"name":"familial auto-immune hemolytic anemia (subtype)","type":"related"},{"name":"idiopathic autoimmune hemolytic anaemia","type":"related"},{"name":"idiopathic autoimmune hemolytic anemia","type":"related"},{"name":"immuno-hemolytic anaemia","type":"related"},{"name":"immuno-hemolytic anemia","type":"related"}],"termid":"MONDO:0020108","xrefs":{"Monarch":{"xref_id":"0020108"}}}


id: GO:0120108
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115428],"is_not":false,"summary":null,"term":"GO:0120108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (DNA)-3'-diphospho-5'-guanosine + H2O = (DNA)-3'-phosphate + GMP.","definition_xrefs":["RHEA:52140","PMID:26007660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA-3'-diphospho-5'-guanosine diphosphatase","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.72"],"synonyms":[{"name":"DNA-3'pp5'G guanylate hydrolase","type":"exact"}],"termid":"GO:0120108","terms_by_termid":{"GO:0120108":null}}


id: PBO:0003574
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Switch One Like","termid":"PBO:0003574"}


id: MONDO:0060489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"46,XX testicular disorder of sex development","termid":"MONDO:0100249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XX sex reversal 4","secondary_identifiers":["UMLS:C4479552","MEDGEN:1373282","OMIM:617480","DOID:0111764"],"synonyms":[{"name":"46, XX sex reversal 4","type":"exact"},{"name":"46,XX SEX reversal 4","type":"related"},{"name":"46,XX Sex reversal, Sry-Negative","type":"related"},{"name":"SRXX4","type":"related"}],"termid":"MONDO:0060489","xrefs":{"Monarch":{"xref_id":"0060489"}}}


id: MONDO:0007634
data:
  {"annotated_genes":["SJAG_03731","SJAG_00982"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84810,84811],"is_not":false,"summary":null,"term":"MONDO:0007634"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00982":null,"SJAG_03731":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, FRA12A type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:369613","MESH:C566980","OMIM:136630","UMLS:C1969893"],"synonyms":[{"name":"intellectual disability, FRA12A type","type":"exact"},{"name":"mental retardation, FRA12A type","type":"related"}],"termid":"MONDO:0007634","terms_by_termid":{"MONDO:0007634":null},"xrefs":{"Monarch":{"xref_id":"0007634"}}}


id: GO:0052147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis in host (obsolete GO:0052147)","synonyms":[{"name":"positive energy taxis within host","type":"exact"}],"termid":"GO:0052147"}


id: PBO:0055857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRP4 antisense RNA 1","termid":"PBO:0055857"}


id: PBO:0004054
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.4.1.-","termid":"PBO:0004054"}


id: PBO:0044257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X3-C motif chemokine receptor 1","termid":"PBO:0044257"}


id: PBO:0035754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_filament-based_movement","termid":"PBO:0035754"}


id: PBO:0038458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adeno-associated virus integration site 1","termid":"PBO:0038458"}


id: GO:1902350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chloroquine stimulus.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:23922869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to chloroquine","termid":"GO:1902349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chloroquine","termid":"GO:1902350"}


id: MONDO:0015400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontonasal arteriovenous malformation is a rare vascular anomaly characterized by abnormal communication between arteries and veins, bypassing the capillary bed, located in the frontonasal area. It may present with intermittent nasal bleeding, blurred vision, pustule formation and/or disfigurement. Overlying skin may be of normal appearance or may manifest a red, pulsatile mass with local rise of temperature. Other features may include pain, ulceration, excessive growth and/or congestive heart failure.","definition_xrefs":["Orphanet:141168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial arteriovenous malformation","termid":"MONDO:0015500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontonasal arteriovenous malformation","secondary_identifiers":["GARD:19955","icd11.foundation:1779519580","MEDGEN:824839","UMLS:C3838993"],"termid":"MONDO:0015400","xrefs":{"Monarch":{"xref_id":"0015400"}}}


id: PBO:0059668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 34","termid":"PBO:0059668"}


id: PBO:0078740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 2 homolog A","termid":"PBO:0078740"}


id: SO:0000124
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Expressed in relatively constant amounts without regard to cellular environmental conditions such as the concentration of a particular substrate.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally_constitutive","synonyms":[{"name":"transcriptionally constitutive","type":"exact"}],"termid":"SO:0000124"}


id: CHEBI:3259
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCCP","termid":"CHEBI:3259"}


id: GO:0060926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pacemaker cell over time, from its formation to the mature state. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell development","termid":"GO:0055013"},{"relation_name":"part_of","term_name":"cardiac pacemaker cell differentiation","termid":"GO:0060920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac pacemaker cell development","synonyms":[{"name":"pacemaker cell development","type":"broad"}],"termid":"GO:0060926"}


id: PBO:0109296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRP2 antisense RNA 1","termid":"PBO:0109296"}


id: MONDO:1010583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"},{"relation_name":"is_a","term_name":"congenital hypothyroidism, chicken","termid":"MONDO:1010601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, chicken","secondary_identifiers":["OMIA:000424-9031"],"termid":"MONDO:1010583","xrefs":{"Monarch":{"xref_id":"1010583"}}}


id: PBO:0063737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 2","termid":"PBO:0063737"}


id: FYECO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, glutamine nitrogen source","synonyms":[{"name":"EMMG","type":"related"},{"name":"glucose minimal medium, glutamine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, glutamine nitrogen source","type":"related"}],"termid":"FYECO:0000403"}


id: FYPO:0001825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium export","termid":"FYPO:0001721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased sodium export","synonyms":[{"name":"increased cellular sodium export","type":"exact"},{"name":"increased sodium export during mitotic cell cycle","type":"related"},{"name":"increased sodium export during vegetative growth","type":"exact"},{"name":"increased sodium export from cell","type":"exact"},{"name":"increased sodium ion export","type":"exact"}],"termid":"FYPO:0001825"}


id: PBO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member D","termid":"PBO:0043280"}


id: MONDO:0013895
data:
  {"annotated_genes":["SJAG_03484","SJAG_04092"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85913,85914],"is_not":false,"summary":null,"term":"MONDO:0013895"}]},"cv_name":"mondo","definition":"Any Adams-Oliver syndrome in which the cause of the disease is a mutation in the RBPJ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Adams-Oliver syndrome","termid":"MONDO:0007034"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03484":null,"SJAG_04092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Adams-Oliver syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:766662","OMIM:614814","UMLS:C3553748","GARD:15842"],"synonyms":[{"name":"AOS3","type":"related"},{"name":"Adams-Oliver syndrome 3","type":"exact"},{"name":"Adams-Oliver syndrome caused by mutation in RBPJ","type":"exact"},{"name":"Adams-Oliver syndrome type 3","type":"exact"},{"name":"RBPJ Adams-Oliver syndrome","type":"exact"}],"termid":"MONDO:0013895","terms_by_termid":{"MONDO:0013895":null},"xrefs":{"Monarch":{"xref_id":"0013895"}}}


id: FYECO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which isoleucine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ile","synonyms":[{"name":"isoleucine added","type":"exact"}],"termid":"FYECO:0000405"}


id: MONDO:0013886
data:
  {"annotated_genes":["SJAG_02196"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85942],"is_not":false,"summary":null,"term":"MONDO:0013886"}]},"cv_name":"mondo","definition":"Non-progressive cerebellar ataxia with intellectual deficit is a rare subtype of autosomal dominant cerebellar ataxia type 1 (ADCA type 1) characterized by the onset in infancy of cerebellar ataxia, neonatal hypotonia (in some), mild developmental delay and, in later life, intellectual disability. Less common features include dysarthria, dysmetria and dysmorphic facial features (long face, bulbous nose long philtrum, thick lower lip and pointed chin).","definition_xrefs":["Orphanet:314647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"cerebellar dysfunction with variable cognitive and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050998","SCTID:723441001","GARD:17429","MEDGEN:766575","UMLS:C3553661","OMIM:614756"],"synonyms":[{"name":"CAMTA1-related disorder","type":"exact"},{"name":"CANPMR","type":"exact"},{"name":"cerebellar ataxia, nonprogressive, with intellectual disability","type":"exact"},{"name":"cerebellar ataxia, nonprogressive, with mental retardation","type":"exact"},{"name":"cerebellar dysfunction with variable cognitive and behavioral abnormalities","type":"exact"},{"name":"non-progressive cerebellar ataxia with intellectual disability","type":"exact"},{"name":"nonprogressive cerebellar ataxia with intellectual disability","type":"exact"},{"name":"nonprogressive cerebellar ataxia with mental retardation","type":"exact"}],"termid":"MONDO:0013886","terms_by_termid":{"MONDO:0013886":null},"xrefs":{"Monarch":{"xref_id":"0013886"}}}


id: PBO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP receptor, synaptobrevin family","termid":"PBO:0001976"}


id: GO:1900473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylcholine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:8056324"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900473)","synonyms":[{"name":"negative regulation of phosphatidylcholine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900473"}


id: FYPO:0005345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation begins during interphase of the cell cycle.","definition_xrefs":["PMID:9808627","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic sister chromatid separation","termid":"FYPO:0000416"},{"relation_name":"is_a","term_name":"mitotic sister chromatid separation in absence of mitotic spindle","termid":"FYPO:0007125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000337","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"mitotic sister chromatid separation during interphase","synonyms":[{"name":"advanced mitotic sister chromatid separation during interphase","type":"exact"},{"name":"chromosome separation during interphase during vegetative growth","type":"exact"},{"name":"mitotic chromosome separation during interphase","type":"exact"},{"name":"premature mitotic sister chromatid separation during interphase","type":"exact"},{"name":"premature sister chromatid separation during interphase of mitotic cell cycle","type":"related"},{"name":"sister chromatid separation during mitotic interphase","type":"exact"}],"termid":"FYPO:0005345"}


id: PBO:0061520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding SET domain protein 3","termid":"PBO:0061520"}


id: PBO:0029528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phytochelatin_absent_from_cell","termid":"PBO:0029528"}


id: MONDO:0009632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia with hyperopia, retinal degeneration, macrophakia, and dental anomalies","secondary_identifiers":["UMLS:C1968637","MEDGEN:368490","MESH:C566884","OMIM:251700"],"synonyms":[{"name":"microphthalmia with hyperopia, retinal degeneration, macrophakia, and dental anomalies","type":"exact"}],"termid":"MONDO:0009632","xrefs":{"Monarch":{"xref_id":"0009632"}}}


id: PR:O60172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21H7.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-repressible acid phosphatase SPBC21H7.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21H7.03c","synonyms":[{"name":"Spom972h-SPBC21H7.03c","type":"exact"}],"termid":"PR:O60172"}


id: PBO:0013749
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tuberous Sclerosis Complex","termid":"PBO:0013749"}


id: MONDO:0100305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of bile acid aminotransferase in which the cause of the disease is a mutation in the BAAT gene.","definition_xrefs":["PMID:16756494","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of bile acid aminotransferase","termid":"MONDO:0100304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"bile acid CoA:amino acid N-acyltransferase deficiency","synonyms":[{"name":"BAAT deficiency","type":"exact"},{"name":"bile acid CoA:amino acid N-acyltransferase deficiency","type":"exact"}],"termid":"MONDO:0100305","xrefs":{"Monarch":{"xref_id":"0100305"}}}


id: PBO:0048689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIPR1 like 1","termid":"PBO:0048689"}


id: PBO:0000207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase (predicted)","termid":"PBO:0000207"}


id: PBO:0058680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6808","termid":"PBO:0058680"}


id: PBO:0028100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alcohol_dehydrogenase_activity","termid":"PBO:0028100"}


id: PBO:0047337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 5","termid":"PBO:0047337"}


id: GO:0003437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication that contributes to the shaping of the growth plate cartilage.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"part_of","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication involved in growth plate cartilage morphogenesis","termid":"GO:0003437"}


id: GO:0030288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periplasmic space","termid":"GO:0042597"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer membrane-bounded periplasmic space","secondary_identifiers":["Wikipedia:Periplasmic_space"],"synonyms":[{"name":"outer membrane bounded periplasmic space","type":"exact"},{"name":"outer membrane-enclosed periplasmic space","type":"exact"}],"termid":"GO:0030288"}


id: GO:0045472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ether stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ether","termid":"GO:0045472"}


id: GO:0010586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression.","definition_xrefs":["PMID:17993620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"miRNA metabolic process","secondary_identifiers":["Reactome:R-HSA-203927"],"synonyms":[{"name":"microRNA metabolic process","type":"exact"}],"termid":"GO:0010586"}


id: GO:0042160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the covalent alteration of one or more amino acid or lipid residues occurring in a lipoprotein, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein modification","termid":"GO:0042160"}


id: MONDO:0007478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant form of Kenny-Caffey Syndrome due to mutation(s) in the FAM111A gene, encoding protein FAM111A. This condition is characterized by transient hypocalcemia, delayed closure of the anterior fontanel, eye anomalies, including microphthalmia, proportionate short stature, and cortical thickening and medullary stenosis of the tubular bones.","definition_xrefs":["NCIT:C130993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Kenny-Caffey syndrome","termid":"MONDO:0016516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Kenny-Caffey syndrome","secondary_identifiers":["MEDGEN:1373312","GARD:83","UMLS:C4316787","DOID:0080723","OMIM:127000","Orphanet:93325"],"synonyms":[{"name":"KCS2","type":"related"},{"name":"Kenny syndrome","type":"broad"},{"name":"Kenny-Caffey syndrome type 2","type":"exact"},{"name":"Kenny-Caffey syndrome, autosomal dominant","type":"exact"},{"name":"Kenny-Caffey syndrome, type 2","type":"related"},{"name":"dwarfism, cortical thickening of tubular bones and transient hypocalcemia","type":"related"},{"name":"dwarfism, cortical thickening of tubular bones, and transient hypocalcemia","type":"related"}],"termid":"MONDO:0007478","xrefs":{"Monarch":{"xref_id":"0007478"}}}


id: PBO:0090865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amt2","termid":"PBO:0090865"}


id: GO:0071972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 a peptidoglycan dimer (tetrapeptide) + 3 H2O = a peptidoglycan tetramer with L,D cross-links (L-Lys-D-Asn-L-Lys) + di-trans,poly-cis-undecaprenyl diphosphate + 4 D-alanine.","definition_xrefs":["MetaCyc:RXN-11349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type carboxypeptidase activity","termid":"GO:0004185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003674","GO:0008233","GO:0003824"],"is_obsolete":false,"name":"peptidoglycan L,D-transpeptidase activity","termid":"GO:0071972"}


id: MONDO:0016500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute sensory ataxic neuropathy is a rare variant of Guillain-Barré syndrome characterized by acute onset monophasic sensory neuropathy with diminished or absent tendon reflexes, loss of proprioception, positive Romberg sign and nerve conduction features of demyelination. It presents several weeks after acute infection with paresthesias, ataxia and neuropathic pain.","definition_xrefs":["Orphanet:231466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute sensory ataxic neuropathy","secondary_identifiers":["SCTID:766049000","icd11.foundation:1951716831","GARD:20618","MEDGEN:1641312","UMLS:C4707661"],"synonyms":[{"name":"ASAN","type":"exact"},{"name":"acute sensory ataxic GBS","type":"exact"},{"name":"acute sensory ataxic Guillain-Barre syndrome","type":"exact"},{"name":"acute sensory ataxic Guillain-Barré syndrome","type":"exact"}],"termid":"MONDO:0016500","xrefs":{"Monarch":{"xref_id":"0016500"}}}


id: PATO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001096 absolute force value (obsolete PATO:0001096)","termid":"PATO:0001096"}


id: MONDO:0007063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A adamantinoma that involves the long bone.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete long bone adamantinoma (obsolete MONDO:0007063)","termid":"MONDO:0007063","xrefs":{"Monarch":{"xref_id":"0007063"}}}


id: GO:0044770
data:
  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1503,91923,98634,93097],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000134"},{"annotations":[92983,111183,94128,106771,112225,104254,78260,93333,92690,111567,114213,106407,108327,100752],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010972"},{"annotations":[78264,70368],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[98450],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[93960],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[102124,89758,111708,93514],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031536"},{"annotations":[102125,106413,105732,108938,105577,116813],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900087"},{"annotations":[103244,110950,87809,70683,73333,101511,108329,110094,94131,93565,98759,91497,87818,94170,106990,116227,116415,98186,91901],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010971"},{"annotations":[87612,101142],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905287"},{"annotations":[73338],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[113529],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[94917],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[116417],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[101861,111123,99898,114513,93568,97453,102132],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[106115],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901987"},{"annotations":[69950,110764],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0007096"},{"annotations":[111712,71252],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010389"},{"annotations":[101093],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[108113],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901993"},{"annotations":[76521,91509,108649,74635,115082,115647],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell commits to entering the next cell cycle phase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle 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cycle phase transition","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell cycle transition","type":"exact"}],"termid":"GO:0044770","terms_by_termid":{"GO:0000082":null,"GO:0000086":null,"GO:0001100":null,"GO:0007089":null,"GO:0007091":null,"GO:0007094":null,"GO:0007095":null,"GO:0007096":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031536":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0033315":null,"GO:0033316":null,"GO:0044772":null,"GO:0044773":null,"GO:0044778":null,"GO:0044878":null,"GO:0045842":null,"GO:0051598":null,"GO:0090267":null,"GO:0110031":null,"GO:0110032":null,"GO:0140499":null,"GO:1900087":null,"GO:1901987":null,"GO:1901993":null,"GO:1902103":null,"GO:1902426":null,"GO:1905191":null,"GO:1905287":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990946":null,"GO:1990949":null,"GO:1990950":null,"GO:2000134":null}}


id: MONDO:1012578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achromatopsia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achromatopsia, non-human animal","termid":"MONDO:1012578","xrefs":{"Monarch":{"xref_id":"1012578"}}}


id: PBO:0035934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_lysine_methylation_during_vegetative_growth","termid":"PBO:0035934"}


id: GO:0009239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of enterobactin, a catechol-derived siderochrome of Enterobacteria; enterobactin (N',N',N''-(2,6,10-trioxo-1,5,9-triacyclodecane-3,7,11-triyl)tris(2,3-dihydroxy)benzamide) is a self-triester of 2,3-dihydroxy-N-benzoyl-L-serine and a product of the shikimate pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enterobactin metabolic process","termid":"GO:0009238"},{"relation_name":"is_a","term_name":"catechol-containing siderophore biosynthetic process","termid":"GO:0019540"},{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"enterobactin biosynthetic process","secondary_identifiers":["GO:0031192","GO:0031191","MetaCyc:ENTBACSYN-PWY"],"synonyms":[{"name":"enterobactin anabolism","type":"exact"},{"name":"enterobactin biosynthesis","type":"exact"},{"name":"enterobactin biosynthetic process, peptide formation","type":"narrow"},{"name":"enterobactin biosynthetic process, peptide modification","type":"narrow"},{"name":"enterobactin formation","type":"exact"},{"name":"enterobactin synthesis","type":"exact"},{"name":"enterobactin synthetase","type":"related"},{"name":"enterochelin biosynthesis","type":"exact"},{"name":"enterochelin biosynthetic process","type":"exact"}],"termid":"GO:0009239"}


id: MONDO:1010482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetralogy of fallot that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetralogy of fallot, non-human animal","termid":"MONDO:1010021"},{"relation_name":"is_a","term_name":"conotruncal heart malformations, dog","termid":"MONDO:1010453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetralogy of fallot, dog","secondary_identifiers":["OMIA:000994-9615"],"termid":"MONDO:1010482","xrefs":{"Monarch":{"xref_id":"1010482"}}}


id: GO:0046618
data:
  {"annotated_genes":["SJAG_03363","SJAG_01145","SJAG_03951"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63554,117695,58482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"The directed movement of a xenobiotic from a cell, into the extracellular region. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:krc","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transport","termid":"GO:0042908"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"xenobiotic export from cell","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"drug export","type":"related"},{"name":"xenobiotic export","type":"related"}],"termid":"GO:0046618","terms_by_termid":{"GO:1990961":null}}


id: GO:0036270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diuretic stimulus. A diuretic is an agent that promotes the excretion of urine through its effects on kidney function.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diuretic","termid":"GO:0036270"}


id: GO:0034519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex found in the cytoplasm that binds the 5' cap structure of an mRNA, and typically consists of the cap-binding protein eIF4E, the adaptor protein eIF4G, and a multi-factor complex comprising eIF1, eIF2, eIF3 and eIF5. This complex mediates recruitment of the 40S subunit to mRNA.","definition_xrefs":["PMID:16405910"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic RNA cap binding complex (obsolete GO:0034519)","termid":"GO:0034519"}


id: GO:0140069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butyryl-CoA + histone = CoA + butyryl-histone.","definition_xrefs":["PMID:27105113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide butyryltransferase activity","termid":"GO:0140065"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone butyryltransferase activity","termid":"GO:0140069"}


id: GO:0090277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptide secretion","termid":"GO:0002793"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"positively_regulates","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"}


id: PBO:0111441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family protein","termid":"PBO:0111441"}


id: GO:0023026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II major histocompatibility complex.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex binding","termid":"GO:0023023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class II protein complex binding","termid":"GO:0023026"}


id: GO:0015337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(out) + H+(out) = Me2+(in) + H+(in). Me can be Mn2+ or Cu2+.","definition_xrefs":["TC:2.A.55.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete low affinity metal ion uptake transporter activity (obsolete GO:0015337)","synonyms":[{"name":"low affinity metal ion uptake transporter activity","type":"exact"}],"termid":"GO:0015337"}


id: GO:0006551
data:
  {"annotated_genes":["SJAG_03243","SJAG_02841","SJAG_03985","SJAG_06635","SJAG_03562","SJAG_04149","SJAG_00396","SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110847],"is_not":false,"summary":null,"term":"GO:0006551"},{"annotations":[74471,59224,76896,90449,103047,112999,79735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"},{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-leucine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-leucine metabolism","type":"exact"},{"name":"leucine metabolic process","type":"broad"}],"termid":"GO:0006551","terms_by_termid":{"GO:0006551":null,"GO:0009098":null}}


id: PBO:0054610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2015","termid":"PBO:0054610"}


id: GO:0030818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP biosynthetic process (obsolete GO:0030818)","synonyms":[{"name":"down regulation of cAMP biosynthetic process","type":"exact"},{"name":"down-regulation of cAMP biosynthetic process","type":"exact"},{"name":"downregulation of cAMP biosynthetic process","type":"exact"},{"name":"inhibition of cAMP biosynthetic process","type":"narrow"},{"name":"negative regulation of 3',5' cAMP biosynthesis","type":"exact"},{"name":"negative regulation of 3',5' cAMP biosynthetic process","type":"exact"},{"name":"negative regulation of 3',5'-cAMP biosynthesis","type":"exact"},{"name":"negative regulation of 3',5'-cAMP biosynthetic process","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate biosynthesis","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate biosynthetic process","type":"exact"},{"name":"negative regulation of cAMP anabolism","type":"exact"},{"name":"negative regulation of cAMP biosynthesis","type":"exact"},{"name":"negative regulation of cAMP formation","type":"exact"},{"name":"negative regulation of cAMP synthesis","type":"exact"},{"name":"negative regulation of cyclic AMP biosynthesis","type":"exact"},{"name":"negative regulation of cyclic AMP biosynthetic process","type":"exact"}],"termid":"GO:0030818"}


id: MONDO:0957575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amegakaryocytic thrombocytopenia, congenital, 2","secondary_identifiers":["MEDGEN:1848998","OMIM:620481","UMLS:C5882679"],"termid":"MONDO:0957575","xrefs":{"Monarch":{"xref_id":"0957575"}}}


id: MONDO:0100354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","termid":"MONDO:0025986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 1","secondary_identifiers":["MESH:C536138","UMLS:C5542316","Orphanet:2241","GARD:15195","SCTID:253781004","OMIM:249210","NCIT:C98982","DOID:0060610","MEDGEN:1778116"],"synonyms":[{"name":"Berdon syndrome","type":"exact"},{"name":"MMIH syndrome","type":"broad"},{"name":"MMIHS","type":"broad"},{"name":"megacystis microcolon intestinal hypoperistalsis syndrome","type":"broad"},{"name":"megacystis, microcolon, hypoperistalsis syndrome","type":"broad"},{"name":"megacystis, microcolon, intestinal hypoperistalsis syndrome","type":"broad"},{"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","type":"broad"},{"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome, MMIH","type":"broad"},{"name":"megacystis-microcolon-intestinal hypoperistalsis-hydronephrosis syndrome","type":"broad"}],"termid":"MONDO:0100354","xrefs":{"Monarch":{"xref_id":"0100354"}}}


id: PBO:0043895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 2","termid":"PBO:0043895"}


id: PBO:0061157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NmrA like redox sensor 2, pseudogene","termid":"PBO:0061157"}


id: GO:0047727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isobutyryl-CoA = butanoyl-CoA.","definition_xrefs":["EC:5.4.99.13","RHEA:13141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"isobutyryl-CoA mutase activity","secondary_identifiers":["KEGG_REACTION:R01181","MetaCyc:ISOBUTYRYL-COA-MUTASE-RXN"],"synonyms":[{"name":"2-methylpropanoyl-CoA CoA-carbonylmutase activity","type":"related"},{"name":"butyryl-CoA:isobutyryl-CoA mutase activity","type":"related"},{"name":"isobutyryl coenzyme A mutase activity","type":"related"}],"termid":"GO:0047727"}


id: PBO:0053987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1304","termid":"PBO:0053987"}


id: GO:0032286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure and material content of mature central nervous system myelin is kept in a functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin maintenance","termid":"GO:0043217"},{"relation_name":"part_of","term_name":"central nervous system myelination","termid":"GO:0022010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"central nervous system myelin maintenance","synonyms":[{"name":"central nervous system myelin sheath maintenance","type":"exact"},{"name":"myelin maintenance in central nervous system","type":"exact"}],"termid":"GO:0032286"}


id: PBO:0085311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidate phosphatase, converts phosphatidate to diacylglycerol; App1p, Pah1p, Dpp1p, and Lpp1p are responsible for all the phosphatidate phosphatase activity; component of cortical actin patches; interacts with components of endocytic pathway","termid":"PBO:0085311"}


id: MONDO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 1 disorder","termid":"MONDO:0700008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1, uniparental disomy 1q12 q21","secondary_identifiers":["MESH:C538085","UMLS:C2931726","GARD:1878","MEDGEN:419882"],"synonyms":[{"name":"Mosaic trisomy 1q12 q21","type":"related"},{"name":"uniparental disomy 1q12 q21","type":"related"}],"termid":"MONDO:0043085","xrefs":{"Monarch":{"xref_id":"0043085"}}}


id: PBO:0026758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_5_residues_during_vegetative_growth","termid":"PBO:0026758"}


id: PBO:0005329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xrcc4 like factor, cernunnon","termid":"PBO:0005329"}


id: PBO:0116289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the INO80 chromatin remodeling complex; target of the Mec1p/Tel1p DNA damage signaling pathway; proposed to link chromatin remodeling to replication checkpoint responses","termid":"PBO:0116289"}


id: PBO:0073710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI family transcriptional corepressor 1","termid":"PBO:0073710"}


id: PBO:0049168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 related adaptor protein 2","termid":"PBO:0049168"}


id: SO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Large Retrotransposon Derivative elements are long-terminal repeats that contain reverse transcriptase priming sites and are conserved in sequence but contain no open reading frames encoding typical retrotransposon proteins . The LARDs identified in barley and other Triticeae have LTRs ~5.5 kb and an interal domain of ~3.5 kb. LARDs lack coding domains and thus do not encode proteins.","definition_xrefs":["PMID:15082561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARD","synonyms":[{"name":"Large Retrotransposon Derivative","type":"exact"},{"name":"large_retrotransposon_derivative","type":"exact"}],"termid":"SO:0002260"}


id: GO:1905546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylpropanoid stimulus.","definition_xrefs":["PMID:22700048","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phenylpropanoid","termid":"GO:1905546"}


id: _global:occurs_at
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_at","secondary_identifiers":["GOREL:0000501"],"termid":"_global:occurs_at"}


id: PBO:0067907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 209","termid":"PBO:0067907"}


id: PBO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octomeric","termid":"PBO:0002497"}


id: PBO:0041607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase activity and apoptosis inhibitor 1","termid":"PBO:0041607"}


id: PBO:0058246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4534","termid":"PBO:0058246"}


id: PBO:0060251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 1","termid":"PBO:0060251"}


id: PBO:0077002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 4","termid":"PBO:0077002"}


id: PBO:0048168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M-phase specific E3 ubiquitin protein ligase","termid":"PBO:0048168"}


id: PBO:0043932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofactor required for Sp1 transcriptional activation subunit 5","termid":"PBO:0043932"}


id: GO:0043914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + sulfur = hydrogen sulfide + NADP+.","definition_xrefs":["GOC:jl","PMID:17449625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"NADPH:sulfur oxidoreductase activity","secondary_identifiers":["EC:1.8.1.18"],"synonyms":[{"name":"CoA-dependent NAD(P)H sulfur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H elemental sulfur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H sulfur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H sulphur oxidoreductase activity","type":"exact"},{"name":"NAD(P)H:sulfur oxidoreductase activity","type":"exact"},{"name":"NADPH:sulphur oxidoreductase activity","type":"exact"},{"name":"NSR","type":"exact"},{"name":"coenzyme A-dependent NAD(P)H sulfur oxidoreductase activity","type":"exact"}],"termid":"GO:0043914"}


id: GO:0098671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface that does not mediate or trigger entry into the host cell. This binding is typically reversible and enhances significantly infectivity by concentrating the virus in the vicinity of its entry receptors, or bringing it to an organ in which its target cells are located.","definition_xrefs":["PMID:18351291","VZ:3943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion receptor-mediated virion attachment to host cell","synonyms":[{"name":"viral attachment to host adhesion receptor","type":"exact"}],"termid":"GO:0098671"}


id: PBO:0060189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 7, secreted","termid":"PBO:0060189"}


id: GO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of tolerance induction which leads to immunological tolerance of a tumor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response to tumor cell","termid":"GO:0002418"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction to tumor cell","termid":"GO:0002413"}


id: PR:Q9Y7Q3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.10","synonyms":[{"name":"Spom972h-SPCC191.10","type":"exact"}],"termid":"PR:Q9Y7Q3"}


id: PBO:0048988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 1","termid":"PBO:0048988"}


id: GO:0072762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbendazim stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbendazim","termid":"GO:1901597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbendazim","termid":"GO:0072762"}


id: MONDO:0957791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with motor regression, progressive spastic paraplegia, and oromotor dysfunction","secondary_identifiers":["MEDGEN:1846192","OMIM:620515","UMLS:C5882695"],"termid":"MONDO:0957791","xrefs":{"Monarch":{"xref_id":"0957791"}}}


id: GO:0030988
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a receptor for high molecular weight kininogens. In humans, this receptor includes the CK1 and uPAR proteins.","definition_xrefs":["PMID:11290596","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"high molecular weight kininogen receptor complex","termid":"GO:0030988"}


id: PBO:0028938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_cell_growth_during_recovery_from_nitrogen_starvation","termid":"PBO:0028938"}


id: GO:1990908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Hydrolysis of Lys63-Linked ubiquitin unit(s) from a ubiquitinated protein by a mechanism where zinc acts as the nucleophile.","definition_xrefs":["PMID:26368668"],"gene_count":0,"genotype_count":0,"name":"obsolete Lys63-specific zinc metallopeptidase deubiquitinase activity (obsolete GO:1990908)","termid":"GO:1990908"}


id: GO:0089700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase D, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase D signaling (obsolete GO:0089700)","synonyms":[{"name":"PKD signal transduction","type":"exact"},{"name":"PKD signaling cascade","type":"related"},{"name":"protein kinase D signal transduction","type":"exact"},{"name":"protein kinase D signaling cascade","type":"related"},{"name":"protein kinase D signalling cascade","type":"related"}],"termid":"GO:0089700"}


id: MONDO:0014534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microlissencephaly in which the cause of the disease is a mutation in the KATNB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microlissencephaly","termid":"MONDO:0015204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 6 with microcephaly","secondary_identifiers":["DOID:0112236","MEDGEN:863962","UMLS:C4015525","OMIM:616212"],"synonyms":[{"name":"KATNB1 Microlissencephaly","type":"exact"},{"name":"KATNB1 microlissencephaly","type":"exact"},{"name":"LIS6","type":"related"},{"name":"Microlissencephaly caused by mutation in KATNB1","type":"exact"},{"name":"lissencephaly 6 with microcephaly","type":"exact"},{"name":"lissencephaly 6, with microcephaly","type":"exact"},{"name":"microlissencephaly caused by mutation in KATNB1","type":"exact"}],"termid":"MONDO:0014534","xrefs":{"Monarch":{"xref_id":"0014534"}}}


id: GO:0048304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgG isotypes","termid":"GO:0048302"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgG isotypes","termid":"GO:0048291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0010467","GO:0006310"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgG isotypes","synonyms":[{"name":"activation of isotype switching to IgG isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgG isotypes","type":"exact"},{"name":"positive regulation of class switching to IgG isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgG isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgG isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgG isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgG isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgG isotypes","type":"exact"}],"termid":"GO:0048304"}


id: GO:1901817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-zeacarotene.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00805","GOC:yaf","PMID:3710717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-zeacarotene metabolic process","termid":"GO:1901816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-zeacarotene catabolic process","synonyms":[{"name":"beta-zeacarotene breakdown","type":"exact"},{"name":"beta-zeacarotene catabolism","type":"exact"},{"name":"beta-zeacarotene degradation","type":"exact"}],"termid":"GO:1901817"}


id: PBO:0073965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 14","termid":"PBO:0073965"}


id: PBO:0090928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate kinase Erg12","termid":"PBO:0090928"}


id: SO:0001056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region that modulates splicing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing_regulatory_region","synonyms":[{"name":"splicing regulatory region","type":"exact"}],"termid":"SO:0001056"}


id: PBO:0041602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 13","termid":"PBO:0041602"}


id: MONDO:0011498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation of DISC1 on chromosome 1q42.2.","definition_xrefs":["DOID:0070085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia, susceptibility to","termid":"MONDO:0100182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia 9","secondary_identifiers":["MEDGEN:346728","UMLS:C1858050","OMIM:604906"],"synonyms":[{"name":"SCZD9","type":"exact"},{"name":"schizophrenia 9","type":"exact"},{"name":"schizophrenia 9 with or without an affective disorder","type":"related"},{"name":"schizophrenia 9, susceptibility to","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 1Q42-related","type":"related"},{"name":"schizophrenia type 9","type":"exact"}],"termid":"MONDO:0011498","xrefs":{"Monarch":{"xref_id":"0011498"}}}


id: PBO:0085918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions","termid":"PBO:0085918"}


id: PBO:0039476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18F, pseudogene","termid":"PBO:0039476"}


id: FYPO:0003157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the growing cell tip, but then remains there for a longer or shorter time than normal.","definition_xrefs":["PMID:24146635","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal maintenance of protein location at cell tip during vegetative growth","termid":"FYPO:0005464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal maintenance of protein location at growing cell tip","synonyms":[{"name":"abnormal maintenance of protein localization at growing cell tip","type":"exact"},{"name":"abnormal maintenance of protein location at growing cell end","type":"exact"},{"name":"abnormal maintenance of protein location at growing cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal maintenance of protein location at growing cell tip during vegetative growth","type":"exact"},{"name":"unstable protein localisation to growing cell tip","type":"exact"},{"name":"unstable protein localization to growing cell tip","type":"exact"}],"termid":"FYPO:0003157"}


id: PBO:0039315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase","termid":"PBO:0039315"}


id: PBO:0113210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein required for complex IV assembly; associates with complex IV assembly intermediates and complex III/complex IV supercomplexes; similar to human SURF1 involved in Leigh Syndrome; complex IV is also known as cytochrome c oxidase; also localizes to the peroxisome","termid":"PBO:0113210"}


id: PBO:0069844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1130, pseudogene","termid":"PBO:0069844"}


id: FYPO:0005825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to iron ions. Cells stop growing (and may die) at a concentration of iron ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to iron","synonyms":[{"name":"hypersensitive to iron","type":"exact"},{"name":"sensitive to iron during mitotic cell cycle","type":"related"},{"name":"sensitive to iron during vegetative growth","type":"exact"},{"name":"sensitive to iron ions","type":"exact"}],"termid":"FYPO:0005825"}


id: PBO:0045581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 3","termid":"PBO:0045581"}


id: PBO:0030585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lysine_level","termid":"PBO:0030585"}


id: PBO:0070539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 5","termid":"PBO:0070539"}


id: GO:0090255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090255"}


id: MONDO:0100376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(9;11)(p21.3;q23.3). (A cytogenetic abnormality that refers to the translocation of the short arm (p21.3) of chromosome 9 and the long arm (q23.3) of chromosome 11. It is associated with the development of acute myeloid leukemia with the MLLT3-MLL fusion gene transcript.)","definition_xrefs":["NCIT:C36370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(9;11)(p21.3;q23.3)","synonyms":[{"name":"AML, t(9;11)(p21.3;q23.3)","type":"exact"},{"name":"AML, t(9;11)(p22;q23)","type":"exact"}],"termid":"MONDO:0100376","xrefs":{"Monarch":{"xref_id":"0100376"}}}


id: PBO:0053626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 670","termid":"PBO:0053626"}


id: PATO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer not exhibiting molecular attraction to another entity in contact.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesivity","termid":"PATO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-adhesive","synonyms":[{"name":"non-resinous","type":"related"}],"termid":"PATO:0002332"}


id: PBO:0068078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 384","termid":"PBO:0068078"}


id: PBO:0057739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1469","termid":"PBO:0057739"}


id: PBO:0017660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-phospholipase A2 activity regulator Pga3 (predicted)","termid":"PBO:0017660"}


id: GO:0060168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the adenosine receptor signaling pathway. The adenosine receptor pathway is the series of molecular signals generated as a consequence of an adenosine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of adenosine receptor signaling pathway","termid":"GO:0060167"},{"relation_name":"positively_regulates","term_name":"G protein-coupled adenosine receptor signaling pathway","termid":"GO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of adenosine receptor signaling pathway","synonyms":[{"name":"positive regulation of adenosine receptor signalling pathway","type":"exact"}],"termid":"GO:0060168"}


id: PBO:0055692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb and CNS expressed 1","termid":"PBO:0055692"}


id: GO:0103033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-lactose = beta-(1->6)-galactobiose.","definition_xrefs":["GOC:pz","EC:5.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular acyltransferase activity","termid":"GO:0016867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"beta-galactosidase activity (lactose isomerization)","secondary_identifiers":["MetaCyc:RXN0-5363"],"termid":"GO:0103033"}


id: PATO:0001271
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated green","synonyms":[{"name":"bright green","type":"related"}],"termid":"PATO:0001271"}


id: PBO:0113494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational activator involved in mitochondrial translation; role in mitochondrial ribosome assembly","termid":"PBO:0113494"}


id: PR:000050537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf3 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been trimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00083.","definition_xrefs":["PRO:DAN","PMID:22150589","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf3 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf3/Me3:(K20)","pombase_gene_id":"SPBC1105.12","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00083","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf3 gene translation product, initiator methionine removed trimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf3/InitMet-/Me3:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00083","type":"broad"},{"name":"hhf3/Me3:(K20)","type":"exact"},{"name":"histone H4 K20me3 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf3 K20me3 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050537"}


id: GO:1990870
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A polymer of proteins that form a fine fiber.","definition_xrefs":["PMID:12764608"],"gene_count":0,"genotype_count":0,"name":"obsolete protein fibril (obsolete GO:1990870)","termid":"GO:1990870"}


id: MONDO:0006059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the nasal cavity mucosa. Signs and symptoms include nasal fullness and obstruction, pain, epistaxis, and the presence of a nasal mass.","definition_xrefs":["NCIT:C8192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity carcinoma","termid":"MONDO:0003212"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity squamous cell carcinoma","secondary_identifiers":["DOID:5515","EFO:1000057","MEDGEN:79104","UMLS:C0280333"],"synonyms":[{"name":"nasal cavity squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of nasal cavity","type":"exact"},{"name":"squamous cell carcinoma of the nasal cavity","type":"exact"}],"termid":"MONDO:0006059","xrefs":{"Monarch":{"xref_id":"0006059"}}}


id: FYPO:0002460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, branched, septated, elongated, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"viable branched, curved, elongated vegetative cell","secondary_identifiers":["FYPO:0002477"],"synonyms":[{"name":"viable branched curved cell","type":"exact"},{"name":"viable branched, curved cell during vegetative growth","type":"exact"},{"name":"viable branched, curved septated cell","type":"exact"},{"name":"viable branched, curved vegetative cell","type":"exact"},{"name":"viable branched, curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, curved, elongated cell during vegetative growth","type":"exact"},{"name":"viable branched, curved, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, elongated, curved septated cell","type":"exact"},{"name":"viable branched, long, curved, septated cell","type":"exact"},{"name":"viable curved branched cell","type":"exact"},{"name":"viable elongated branched curved cell","type":"exact"}],"termid":"FYPO:0002460"}


id: GO:0052192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in environment of other organism involved in symbiotic interaction (obsolete GO:0052192)","synonyms":[{"name":"locomotion in environment of other organism during symbiotic interaction","type":"related"},{"name":"movement in environment of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052192"}


id: PBO:0031487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_spindle","termid":"PBO:0031487"}


id: GO:0060151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a peroxisome is transported to, and/or maintained in, a specific location. A peroxisome is a small membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.","definition_xrefs":["PMID:16449325","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"peroxisome localization","synonyms":[{"name":"peroxisome localisation","type":"exact"}],"termid":"GO:0060151"}


id: GO:0140936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone deubiquitinase that cleaves ubiquitin from a histone H2B protein to which it is conjugated.","definition_xrefs":["PMID:29352077","PMID:18206972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deubiquitinase activity","termid":"GO:0140934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"histone H2B deubiquitinase activity","synonyms":[{"name":"histone H2B deubiquitination","type":"related"}],"termid":"GO:0140936"}


id: PBO:0048096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 17","termid":"PBO:0048096"}


id: MONDO:1010599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoparathyroidism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism, non-human animal","termid":"MONDO:1010056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoparathyroidism, domestic cat","secondary_identifiers":["OMIA:000528-9685"],"termid":"MONDO:1010599","xrefs":{"Monarch":{"xref_id":"1010599"}}}


id: MONDO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the ovary and is characterized by the presence of malignant epithelial cells that, in well differentiated tumors, resemble the epithelium of the fallopian tube or, in poorly differentiated tumors, show anaplastic features and marked nuclear atypia.","definition_xrefs":["NCIT:C7550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"},{"relation_name":"is_a","term_name":"malignant ovarian serous tumor","termid":"MONDO:0024885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian serous adenocarcinoma","secondary_identifiers":["EFO:0002917","DOID:0050933","DOID:5744","MEDGEN:233278","UMLS:C1335177","ONCOTREE:SOC"],"synonyms":[{"name":"malignant ovarian serous tumour","type":"related"},{"name":"ovarian serous adenocarcinoma","type":"exact"},{"name":"ovarian serous carcinoma","type":"exact"},{"name":"ovary serous adenocarcinoma","type":"exact"},{"name":"serous adenocarcinoma of ovary","type":"exact"},{"name":"serous adenocarcinoma of the ovary","type":"exact"},{"name":"serous carcinoma of ovary","type":"exact"},{"name":"serous carcinoma of the ovary","type":"exact"},{"name":"serous ovarian cancer","type":"related"}],"termid":"MONDO:0005211","xrefs":{"Monarch":{"xref_id":"0005211"}}}


id: GO:2000940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plant-type cell wall cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant-type cell wall cellulose catabolic process","termid":"GO:2000939"},{"relation_name":"is_a","term_name":"negative regulation of cell wall polysaccharide catabolic process","termid":"GO:2000967"},{"relation_name":"negatively_regulates","term_name":"plant-type cell wall cellulose catabolic process","termid":"GO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of plant-type cell wall cellulose catabolic process","synonyms":[{"name":"negative regulation of plant-type cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000940"}


id: PBO:0075455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 6","termid":"PBO:0075455"}


id: PBO:0056899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIER1 transcriptional regulator","termid":"PBO:0056899"}


id: MONDO:1010978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease, non-human animal","termid":"MONDO:1010231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, sheep","secondary_identifiers":["OMIA:000485-9940"],"termid":"MONDO:1010978","xrefs":{"Monarch":{"xref_id":"1010978"}}}


id: GO:0034758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of iron ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transport","termid":"GO:0034756"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"iron ion transport","termid":"GO:0006826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of iron ion transport","synonyms":[{"name":"activation of iron ion transport","type":"narrow"},{"name":"positive regulation of iron transport","type":"exact"},{"name":"stimulation of iron ion transport","type":"narrow"},{"name":"up regulation of iron ion transport","type":"exact"},{"name":"up-regulation of iron ion transport","type":"exact"},{"name":"upregulation of iron ion transport","type":"exact"}],"termid":"GO:0034758"}


id: PBO:0048376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 1B","termid":"PBO:0048376"}


id: GO:2000796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Notch signaling pathway that is involved in negative regulation of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"negative regulation of venous endothelial cell fate commitment","termid":"GO:2000788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling pathway involved in negative regulation of venous endothelial cell fate commitment","synonyms":[{"name":"N signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch receptor signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch receptor signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch-receptor signaling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"},{"name":"Notch-receptor signalling pathway involved in negative regulation of venous endothelial cell fate commitment","type":"exact"}],"termid":"GO:2000796"}


id: PBO:0039995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL8B pseudogene 1","termid":"PBO:0039995"}


id: PBO:0086057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and bud; not an essential gene; protein abundance increases in response to DNA replication stress; YMR295C has a paralog, YGR273C, that arose from the whole genome duplication","termid":"PBO:0086057"}


id: PBO:0087597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; green fluorescent protein (GFP)-fusion protein localizes to endosomes","termid":"PBO:0087597"}


id: GO:0009197
data:
  {"annotated_genes":["SJAG_02874","SJAG_04665","SJAG_00885","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92201,95244,107013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine deoxyribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate biosynthetic process","termid":"GO:0009139"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009189"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside diphosphate anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate formation","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009197","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: GO:0031890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"VIP receptor binding","type":"exact"},{"name":"vasoactive intestinal polypeptide receptor ligand","type":"narrow"}],"termid":"GO:0031890"}


id: GO:0043797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde-3-phosphate + H2O + 2 oxidized ferredoxin = 3-phospho-D-glycerate + 2 H+ + 2 reduced ferredoxin.","definition_xrefs":["PMID:7721730","PMID:11265456","RHEA:24148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) activity","secondary_identifiers":["EC:1.2.7.6","MetaCyc:1.2.7.6-RXN"],"synonyms":[{"name":"D-glyceraldehyde-3-phosphate:ferredoxin oxidoreductase activity","type":"exact"},{"name":"GAPOR","type":"related"},{"name":"glyceraldehyde-3-phosphate Fd oxidoreductase activity","type":"related"},{"name":"glyceraldehyde-3-phosphate ferredoxin reductase activity","type":"related"}],"termid":"GO:0043797"}


id: PBO:0043906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRK proto-oncogene, adaptor protein","termid":"PBO:0043906"}


id: GO:1901004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving ubiquinone-6. Ubiquinone-6 is a ubiquinone compound having a (2E,6E,10E,14E,18E)-3,7,11,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaen-1-yl substituent at position 2.","definition_xrefs":["PMID:1409592","GOC:al","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone-6 metabolic process (obsolete GO:1901004)","synonyms":[{"name":"coenzyme Q6 metabolic process","type":"exact"},{"name":"coenzyme Q6 metabolism","type":"exact"},{"name":"ubiquinone-6 metabolism","type":"exact"}],"termid":"GO:1901004"}


id: PBO:0034579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_dehydrogenase_(NADP+)_activity","termid":"PBO:0034579"}


id: PBO:0063669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 1","termid":"PBO:0063669"}


id: MOD:01661
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to pyruvic acid.","definition_xrefs":["PubMed:500639","PubMed:10085076","PubMed:8464063","PubMed:3042771","RESID:AA0127#TYR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"pyruvic acid","termid":"MOD:01154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid (Tyr)","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Tyr)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:01661"}


id: PBO:0050109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 19","termid":"PBO:0050109"}


id: PBO:0057987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3913-1","termid":"PBO:0057987"}


id: PBO:0003082
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.28","termid":"PBO:0003082"}


id: GO:1905345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cleavage furrow.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:27082518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cleavage furrow","synonyms":[{"name":"protein localisation in cleavage furrow","type":"exact"},{"name":"protein localisation to cleavage furrow","type":"exact"},{"name":"protein localization in cleavage furrow","type":"exact"}],"termid":"GO:1905345"}


id: MONDO:0009432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypopituitarism, congenital, with central diabetes insipidus","secondary_identifiers":["MEDGEN:340970","MESH:C565477","OMIM:241540","UMLS:C1855800"],"synonyms":[{"name":"hypopituitarism, congenital, with central diabetes insipidus","type":"exact"}],"termid":"MONDO:0009432","xrefs":{"Monarch":{"xref_id":"0009432"}}}


id: PATO:0002403
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Affecting all regions without specificity of distribution.","definition_xrefs":["PATOC:MPTH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized","synonyms":[{"name":"generalised","type":"exact"}],"termid":"PATO:0002403"}


id: PBO:0091421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NTPase Obg family, human OLA1 ortholog, implicated in mitochondrial translation, ribosome assembly, or tRNA metabolism","termid":"PBO:0091421"}


id: GO:0010085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the establishment of polarity along the proximal/distal axis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"proximal/distal axis specification","termid":"GO:0009946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polarity specification of proximal/distal axis","termid":"GO:0010085"}


id: PBO:0064980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 36, pseudogene","termid":"PBO:0064980"}


id: SO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DsrA RNA regulates both transcription, by overcoming transcriptional silencing by the nucleoid-associated H-NS protein, and translation, by promoting efficient translation of the stress sigma factor, RpoS. These two activities of DsrA can be separated by mutation: the first of three stem-loops of the 85 nucleotide RNA is necessary for RpoS translation but not for anti-H-NS action, while the second stem-loop is essential for antisilencing and less critical for RpoS translation. The third stem-loop, which behaves as a transcription terminator, can be substituted by the trp transcription terminator without loss of either DsrA function. The sequence of the first stem-loop of DsrA is complementary with the upstream leader portion of RpoS messenger RNA, suggesting that pairing of DsrA with the RpoS message might be important for translational regulation.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DsrA_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/DsrA_RNA"],"synonyms":[{"name":"DsrA RNA","type":"exact"}],"termid":"SO:0000378"}


id: FYPO:0001526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing L-thialysine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on L-thialysine","synonyms":[{"name":"normal cell population growth in presence of L-thialysine","type":"exact"},{"name":"normal cell population growth on L-thialysine","type":"exact"},{"name":"normal cell population growth on thialysine","type":"broad"},{"name":"normal cellular response to L-thialysine","type":"related"},{"name":"normal vegetative cell population growth on L-thialysine","type":"exact"}],"termid":"FYPO:0001526"}


id: GO:0032754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-5 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-5 production","termid":"GO:0032674"},{"relation_name":"positively_regulates","term_name":"interleukin-5 production","termid":"GO:0032634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-5 production","secondary_identifiers":["GO:2000664","GO:0045407"],"synonyms":[{"name":"activation of interleukin-5 production","type":"narrow"},{"name":"positive regulation of IL-5 production","type":"exact"},{"name":"positive regulation of interleukin-5 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-5 secretion","type":"narrow"},{"name":"stimulation of interleukin-5 production","type":"narrow"},{"name":"up regulation of interleukin-5 production","type":"exact"},{"name":"up-regulation of interleukin-5 production","type":"exact"},{"name":"upregulation of interleukin-5 production","type":"exact"}],"termid":"GO:0032754"}


id: PBO:0061710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 5","termid":"PBO:0061710"}


id: GO:0005173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a stem cell factor receptor (SCFR), a type III transmembrane kinase receptor.","definition_xrefs":["GOC:jl","PMID:10698217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"stem cell factor receptor binding","synonyms":[{"name":"KIT binding","type":"narrow"},{"name":"SCF","type":"narrow"},{"name":"SCFR binding","type":"exact"},{"name":"stem cell factor","type":"narrow"},{"name":"stem cell factor receptor ligand","type":"narrow"}],"termid":"GO:0005173"}


id: GO:0120514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'-hydro-2'-hydroxy-beta-oxodihydrochalcone + UDP-alpha-D-glucose = a 3'-(beta-D-glucopyranosyl)-2'-hydroxy-beta-oxodihydrochalcone + H+ + UDP.","definition_xrefs":["RHEA:51504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyflavanone C-glucosyltransferase activity","secondary_identifiers":["EC:2.4.1.360","MetaCyc:RXN-18732"],"termid":"GO:0120514"}


id: MOD:00881
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 465 megerd with 199. Remap to MOD:00552 DiMethyl-CH2D.","definition_xrefs":["Unimod:465","PubMed:9252331"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00881 N-reductive amination-D (obsolete MOD:00881)","termid":"MOD:00881"}


id: GO:0071396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipid","termid":"GO:0071396"}


id: PBO:0087401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; light sensing pathway component that accumulates in the nucleus in response to blue light; relative distribution to nucleus increases upon DNA replication stress","termid":"PBO:0087401"}


id: PBO:0054810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2223","termid":"PBO:0054810"}


id: PBO:0084659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondria-associated F-box protein; involved in maintenance of normal mitochondrial morphology; interacts with Skp1p through the F-box motif; preferentially localizes to the mother cell during budding","termid":"PBO:0084659"}


id: GO:0035136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forelimb morphogenesis","secondary_identifiers":["GO:0035140"],"synonyms":[{"name":"arm morphogenesis","type":"narrow"}],"termid":"GO:0035136"}


id: GO:0050792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the viral life cycle, the set of processes by which a virus reproduces and spreads among hosts.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral process","synonyms":[{"name":"regulation of viral reproduction","type":"narrow"}],"termid":"GO:0050792"}


id: PBO:0079618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L3","termid":"PBO:0079618"}


id: MONDO:0026767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 74, COVID-19-related, X-linked","secondary_identifiers":["OMIM:301051","DOID:0112063","UMLS:C5435745","MEDGEN:1768360"],"synonyms":[{"name":"IMD74","type":"related"},{"name":"IMMUNODEFICIENCY 74, COVID19-RELATED, X-LINKED","type":"related"},{"name":"TLR7 deficiency","type":"related"},{"name":"immunodeficiency 74, COVID19-related, X-linked, X-linked recessive","type":"exact"},{"name":"respiratory insufficiency due to SARS-CoV-2 viral infection","type":"related"}],"termid":"MONDO:0026767","xrefs":{"Monarch":{"xref_id":"0026767"}}}


id: PBO:0066316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein, mRNA processing factor 2","termid":"PBO:0066316"}


id: GO:0008773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + (protein-PII) = diphosphate + uridylyl-(protein-PII).","definition_xrefs":["EC:2.7.7.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"[protein-PII] uridylyltransferase activity","secondary_identifiers":["MetaCyc:URITRANS-RXN","RHEA:13673"],"synonyms":[{"name":"PII uridylyl-transferase activity","type":"related"},{"name":"UTP:[protein-PII] uridylyltransferase activity","type":"exact"},{"name":"UTP:protein-PII uridylyltransferase activity","type":"related"},{"name":"protein-PII uridylyltransferase activity","type":"related"},{"name":"uridyl removing enzyme","type":"related"},{"name":"uridylyl removing enzyme activity","type":"broad"}],"termid":"GO:0008773"}


id: MOD:00994
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-bromo-L-tyrosine","termid":"MOD:01025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br labeled 3'-bromotyrosine","termid":"MOD:00994"}


id: PBO:0052153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNJ2 antisense RNA 1","termid":"PBO:0052153"}


id: PBO:0075286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 27","termid":"PBO:0075286"}


id: GO:0015925
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004557"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of galactosyl compounds, substances containing a group derived from a cyclic form of galactose or a galactose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"galactosidase activity","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0015925","terms_by_termid":{"GO:0004557":null}}


id: PBO:0041206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bystin like","termid":"PBO:0041206"}


id: MONDO:0001946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Abnormally high level of estrogen.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperestrogenism (obsolete MONDO:0001946)","secondary_identifiers":["ICD10WHO:E28.0","NANDO:2200379","ICD9:256.0","SCTID:37295009","ICD10CM:E28.0","DOID:14336"],"synonyms":[{"name":"estrogen Excess","type":"related"},{"name":"hyperestrogenism","type":"exact"}],"termid":"MONDO:0001946","xrefs":{"Monarch":{"xref_id":"0001946"}}}


id: PBO:0051782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing E","termid":"PBO:0051782"}


id: PBO:0034027
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_curator_email","termid":"PBO:0034027"}


id: FYPO:0000629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which programmed cell death by apoptosis is abnormal. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["GO:0006915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal apoptotic process","synonyms":[{"name":"abnormal apoptosis","type":"narrow"}],"termid":"FYPO:0000629"}


id: GO:0019449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including hypotaurine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-cysteine catabolic process to hypotaurine","synonyms":[{"name":"L-cysteine breakdown to hypotaurine","type":"exact"},{"name":"L-cysteine degradation to hypotaurine","type":"exact"}],"termid":"GO:0019449"}


id: GO:0042196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorinated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with chlorine atoms.","definition_xrefs":["GOC:ai","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chlorinated hydrocarbon metabolic process","synonyms":[{"name":"chlorinated hydrocarbon metabolism","type":"exact"}],"termid":"GO:0042196"}


id: GO:0016435
data:
  {"annotated_genes":["SJAG_02281","SJAG_00722"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070043"},{"annotations":[89388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070039"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methylguanine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_02281":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"rRNA (guanine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016435","terms_by_termid":{"GO:0070039":null,"GO:0070043":null}}


id: GO:0010878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation and maintenance in cells or tissues of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholesterol storage","synonyms":[{"name":"cholesterol sequestration","type":"narrow"},{"name":"sequestration of cholesterol","type":"narrow"}],"termid":"GO:0010878"}


id: GO:0035283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of the central nervous system into a series of semi-repetitive parts or segments.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system segmentation","termid":"GO:0035283"}


id: PBO:0054240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1622","termid":"PBO:0054240"}


id: GO:0042791
data:
  {"annotated_genes":["SJAG_02815"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73576],"is_not":false,"summary":null,"term":"GO:0042791"}]},"cv_name":"biological_process","definition":"The synthesis of 5S ribosomal RNA (rRNA), or an equivalent rRNA, from a DNA template by RNA polymerase III (Pol III), originating at a type 1 RNA polymerase III promoter.","definition_xrefs":["PMID:12381659","GOC:jl","GOC:txnOH","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"},{"relation_name":"is_a","term_name":"rRNA transcription","termid":"GO:0009303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"5S class rRNA transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"5S class rRNA transcription from RNA polymerase III type 1 promoter","type":"related"},{"name":"5S rRNA transcription","type":"exact"}],"termid":"GO:0042791","terms_by_termid":{"GO:0042791":null}}


id: MONDO:0004636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the lip.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity carcinoma in situ","termid":"MONDO:0000371"},{"relation_name":"is_a","term_name":"carcinoma of lip","termid":"MONDO:0021333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"lip carcinoma in situ","secondary_identifiers":["UMLS:C0347082","NCIT:C4588","SCTID:92643000","DOID:8661","ICD9:230.0","MEDGEN:83849"],"synonyms":[{"name":"carcinoma in situ of lip","type":"exact"},{"name":"carcinoma in situ of the Lip","type":"exact"},{"name":"lip in situ carcinoma","type":"exact"},{"name":"stage 0 Lip cancer","type":"exact"},{"name":"stage 0 Lip cancer aJCC v6","type":"exact"},{"name":"stage 0 Lip cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 Lip cancer aJCC v7","type":"exact"},{"name":"stage 0 cancer of Lip","type":"exact"},{"name":"stage 0 cancer of the Lip","type":"exact"},{"name":"stage 0 carcinoma of Lip","type":"exact"},{"name":"stage 0 carcinoma of the Lip","type":"exact"},{"name":"stage 0 lip carcinoma","type":"exact"}],"termid":"MONDO:0004636","xrefs":{"Monarch":{"xref_id":"0004636"}}}


id: PR:O14291
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.05","synonyms":[{"name":"Spom972h-SPAC9E9.05","type":"exact"}],"termid":"PR:O14291"}


id: MONDO:0008287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Greig cephalopolysyndactyly syndrome (GCPS) is a pleiotropic, multiple congenital anomaly syndrome.","definition_xrefs":["Orphanet:380"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acrocephalosyndactyly","termid":"MONDO:0019796"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Greig cephalopolysyndactyly syndrome","secondary_identifiers":["OMIM:175700","NCIT:C35255","GARD:6550","MESH:C537300","UMLS:C0265306","NORD:1206","MEDGEN:120531","MedDRA:10053878","SCTID:32985001","DOID:14761","icd11.foundation:606500237"],"synonyms":[{"name":"GCPS","type":"exact"},{"name":"Greig cephalopolysyndactyly syndrome","type":"exact"},{"name":"Greig cephalosyndactyly syndrome","type":"exact"},{"name":"Greig syndrome","type":"related"},{"name":"Greig's syndrome","type":"exact"},{"name":"polysyndactyly with peculiar skull Shape","type":"related"},{"name":"polysyndactyly with peculiars skull shape","type":"exact"}],"termid":"MONDO:0008287","xrefs":{"Monarch":{"xref_id":"0008287"}}}


id: GO:0016641
data:
  {"annotated_genes":["SJAG_00707","SJAG_01881","SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"},{"annotations":[114496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"},{"annotations":[75595,111575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004733"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null,"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.4.3.-"],"termid":"GO:0016641","terms_by_termid":{"GO:0003884":null,"GO:0004733":null,"GO:0043799":null}}


id: MONDO:0032910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 34","secondary_identifiers":["GARD:16378","UMLS:C5394053","DOID:0112091","OMIM:618776","MEDGEN:1720533"],"synonyms":[{"name":"MC1DN34","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 34","type":"related"}],"termid":"MONDO:0032910","xrefs":{"Monarch":{"xref_id":"0032910"}}}


id: GO:0018912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving 1,4-dichlorobenzene (p-dichlorobenzene or paramoth), a derivative of benzene with two chlorine atoms attached at opposite positions on the ring. It forms white crystals at room temperature and is used as an insecticidal fumigant, particularly in mothballs.","definition_xrefs":["PMID:9148781"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,4-dichlorobenzene metabolic process (obsolete GO:0018912)","synonyms":[{"name":"1,4-dichlorobenzene metabolism","type":"broad"}],"termid":"GO:0018912"}


id: MONDO:0005121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection induced by Enterococcus faecalis which is the most prevalent species (along with Enterococcus faecium) cultured from humans, accounting for more than 90% of clinical isolates. Enterococci are part of the normal intestinal flora of humans and animals. They have been long recognized as important human pathogens.","definition_xrefs":["EFO:0000780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Enterococcus infectious disease","termid":"MONDO:1040019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enterococcus faecalis infection","secondary_identifiers":["UMLS:C0948752","MEDGEN:1843390"],"synonyms":[{"name":"Enterococcus faecalis caused disease or disorder","type":"exact"},{"name":"Enterococcus faecalis disease or disorder","type":"exact"},{"name":"Enterococcus faecalis infectious disease","type":"exact"}],"termid":"MONDO:0005121","xrefs":{"Monarch":{"xref_id":"0005121"}}}


id: MONDO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Papilloma's are benign epithelial neoplasms that produce visible warty projections from epithelial surfaces. Papilloma's of the urethra typically occur just within or on the external meatus. - 2003","definition_xrefs":["NCIT:C5061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"},{"relation_name":"is_a","term_name":"benign urethral neoplasm","termid":"MONDO:0004177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral urothelial papilloma","secondary_identifiers":["DOID:2140","MEDGEN:275549","UMLS:C1519826"],"synonyms":[{"name":"urethra urothelial papilloma","type":"exact"},{"name":"urethral urothelial papilloma","type":"exact"}],"termid":"MONDO:0002221","xrefs":{"Monarch":{"xref_id":"0002221"}}}


id: PBO:0065406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 6 pseudogene 2","termid":"PBO:0065406"}


id: GO:1990176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in maltose transport through the plasma membrane. In E. coli, the complex is a tetramer and consists of a cytoplasmic ATPase MalK homodimer together with a heterodimeric transmembrane subunit MalF-MalG.","definition_xrefs":["GOC:bhm","PMID:19250913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"maltose transport complex","termid":"GO:1990060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"MalFGK2 complex","synonyms":[{"name":"MalF-MalG-MalK(2) complex","type":"exact"},{"name":"MalF-MalG-MalK-MalK complex","type":"exact"},{"name":"MalFGK(2) complex","type":"exact"},{"name":"maltose transport MalFGK2 complex","type":"exact"},{"name":"maltose transport complex, core subunit","type":"exact"}],"termid":"GO:1990176"}


id: PBO:0075734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 2","termid":"PBO:0075734"}


id: PBO:0087962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transport adaptor or symportin; assembly chaperone that co-translationally associates with nascent Rpl5p, preventing aggregation; facilitates synchronized nuclear coimport of two 5S-rRNA binding proteins, Rpl5p and Rpl11p, mediated by import receptor Kap104p; required for biogenesis of the large ribosomal subunit; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0087962"}


id: PBO:0073811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A14 pseudogene 2","termid":"PBO:0073811"}


id: MONDO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of reduced bone mass, with decreased cortical thickness and a decrease in the number and size of the trabeculae of cancellous bone (but normal chemical composition), resulting in increased fracture incidence. Osteoporosis is classified as primary (Type 1, postmenopausal osteoporosis; Type 2, age-associated osteoporosis; and idiopathic, which can affect juveniles, premenopausal women, and middle-aged men) and secondary osteoporosis (which results from an identifiable cause of bone mass loss).","definition_xrefs":["NCIT:C3298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone resorption disease","termid":"MONDO:0000837"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"},{"relation_name":"is_a","term_name":"metabolic bone disorder","termid":"MONDO:0800486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteoporosis","secondary_identifiers":["DOID:11476","ICD10CM:M81","ICD9:733.09","MEDGEN:14535","EFO:0003882","GARD:11932","icd11.foundation:2113001430","ICD9:733.0","ICD9:733.00","MESH:D010024","OMIM:166710","SCTID:64859006","UMLS:C0029456"],"synonyms":[{"name":"bone mineral density variation QTL, osteoporosis","type":"exact"},{"name":"fracture, hip, susceptibility to","type":"related"},{"name":"osteoporosis, involutional","type":"related"},{"name":"osteoporosis, postmenopausal","type":"exact"},{"name":"osteoporosis, postmenopausal, susceptibility","type":"exact"},{"name":"osteoporosis, susceptibility to","type":"exact"}],"termid":"MONDO:0005298","xrefs":{"Monarch":{"xref_id":"0005298"}}}


id: MONDO:0004813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pneumothorax in which air enters into the pleural cavity.","definition_xrefs":["DOID:9534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous pneumothorax","secondary_identifiers":["ICD9:011.7","ICD9:011.72","ICD9:011.76","UMLS:C0152600","ICD9:011.70","MEDGEN:509067","ICD9:011.73","SCTID:29731002","ICD9:011.71"],"termid":"MONDO:0004813","xrefs":{"Monarch":{"xref_id":"0004813"}}}


id: SO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region composed of the TSS(s) and binding sites for TF_complexes of the core transcription machinery. A region (DNA) to which RNA polymerase binds, to begin transcription.","definition_xrefs":["SO:regcreative"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"},{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter","secondary_identifiers":["http://en.wikipedia.org/wiki/Promoter"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:promoter","type":"exact"},{"name":"promoter sequence","type":"exact"}],"termid":"SO:0000167"}


id: PBO:0071315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27","termid":"PBO:0071315"}


id: PBO:0034274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_start_sequence","termid":"PBO:0034274"}


id: MONDO:0971015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class II deficiency","termid":"MONDO:0008855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class II deficiency 4","secondary_identifiers":["UMLS:C1859537","MEDGEN:347176","OMIM:620817"],"termid":"MONDO:0971015","xrefs":{"Monarch":{"xref_id":"0971015"}}}


id: GO:0060218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a hematopoietic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.","definition_xrefs":["GOC:bf","GOC:BHF","GOC:dph","GOC:rl","PMID:15378083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"},{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell differentiation","synonyms":[{"name":"haematopoietic stem cell differentiation","type":"exact"},{"name":"haemopoietic stem cell differentiation","type":"exact"},{"name":"hemopoietic stem cell differentiation","type":"exact"}],"termid":"GO:0060218"}


id: PBO:0002612
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YJR070C","termid":"PBO:0002612"}


id: PBO:0060072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 19","termid":"PBO:0060072"}


id: GO:0016853
data:
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id: GO:0052019
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id: PBO:0034723
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id: MONDO:0005683
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id: PBO:0080474
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id: PBO:0043664
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id: PBO:0067426
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id: SO:0000521
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id: PBO:0003225
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id: GO:0030195
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id: MONDO:0016432
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id: PBO:0077752
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id: PBO:0056298
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id: MONDO:0006951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An occlusion of the retinal vein.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular occlusion","termid":"MONDO:0002089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal vein occlusion","secondary_identifiers":["MedDRA:10038907","MESH:D012170","DOID:1727","EFO:1001157","NCIT:C34981","MEDGEN:19763","SCTID:46085004","UMLS:C0035328"],"synonyms":[{"name":"occlusion, of retinal vein","type":"exact"},{"name":"retinal vein occlusion","type":"exact"}],"termid":"MONDO:0006951","xrefs":{"Monarch":{"xref_id":"0006951"}}}


id: GO:0046711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009180"},{"relation_name":"is_a","term_name":"GDP metabolic process","termid":"GO:0046710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP biosynthetic process","synonyms":[{"name":"GDP anabolism","type":"exact"},{"name":"GDP biosynthesis","type":"exact"},{"name":"GDP formation","type":"exact"},{"name":"GDP synthesis","type":"exact"}],"termid":"GO:0046711"}


id: PBO:0113536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein kinase; negatively regulates membrane fusion; associates with vacuolar membrane through palmitoylation of one or more cysteines in consensus sequence; vacuolar membrane association is essential to its kinase activity; targeted to vacuole via AP-3 pathway; mutant shows defect in CPY processing; ortholog of human serine/threonine kinase 16 (STK16)","termid":"PBO:0113536"}


id: GO:0018702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene + H+ + 2 e- = Cl- + 1-chloro-2,2-bis(4-chlorophenyl)ethene. 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene is also known as DDE; 1-chloro-2,2-bis(4-chlorophenyl)ethene is also known as DDMU.","definition_xrefs":["UM-BBD_reactionID:r0440"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene dehalogenase activity (obsolete GO:0018702)","synonyms":[{"name":"1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene dehalogenase activity","type":"exact"},{"name":"DDE dehalogenase activity","type":"exact"}],"termid":"GO:0018702"}


id: MONDO:0035821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias","termid":"MONDO:0005345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated female hypospadias","secondary_identifiers":["Orphanet:603515","UMLS:C5681495","GARD:22434","MEDGEN:1842898"],"termid":"MONDO:0035821","xrefs":{"Monarch":{"xref_id":"0035821"}}}


id: PBO:0027176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_spatial_extent_of_telomeric_heterochromatin_assembly","termid":"PBO:0027176"}


id: PBO:0054611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2016","termid":"PBO:0054611"}


id: GO:0047574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-acetamidobutanoyl-CoA + H2O = 4-aminobutanoyl-CoA + acetate.","definition_xrefs":["RHEA:22928","EC:3.5.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0019213","GO:0016810"],"is_obsolete":false,"name":"4-acetamidobutyryl-CoA deacetylase activity","secondary_identifiers":["KEGG_REACTION:R04056","MetaCyc:4-ACETAMIDOBUTYRYL-COA-DEACETYLASE-RXN"],"synonyms":[{"name":"4-acetamidobutanoyl-CoA amidohydrolase activity","type":"related"},{"name":"aminobutyryl-CoA thiolesterase activity","type":"related"},{"name":"deacetylase-thiolesterase activity","type":"related"}],"termid":"GO:0047574"}


id: PBO:0058593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6724-4","termid":"PBO:0058593"}


id: PR:Q1K9C4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hul5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1K9C4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin protein ligase C167.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.07c","synonyms":[{"name":"Spom972h-hul5","type":"exact"}],"termid":"PR:Q1K9C4"}


id: PBO:0044538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differentiation antagonizing non-protein coding RNA","termid":"PBO:0044538"}


id: GO:0042439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethanolamine (2-aminoethanol) and compounds derived from it.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanolamine-containing compound metabolic process","synonyms":[{"name":"ethanolamine and derivative metabolic process","type":"exact"},{"name":"ethanolamine and derivative metabolism","type":"exact"},{"name":"ethanolamine-containing compound metabolism","type":"exact"}],"termid":"GO:0042439"}


id: PBO:0110366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR pathway substrate 8, signaling adaptor","termid":"PBO:0110366"}


id: PR:O13748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tae1 gene.","definition_xrefs":["UniProtKB:O13748","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha N-terminal protein methyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.14c","synonyms":[{"name":"NTM1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tae1","type":"exact"},{"name":"X-Pro-Lys N-terminal protein methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation associated element 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13748"}


id: PBO:0065016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 2","termid":"PBO:0065016"}


id: MONDO:0017454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Triphalangeal thumb-polysyndactyly syndrome (TPT-PS) is a hand-foot malformation characterized by triphalangeal thumbs and pre- and postaxial polydactyly, isolated syndactyly or complex polysyndactyly.","definition_xrefs":["Orphanet:2950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triphalangeal thumb-polysyndactyly syndrome","secondary_identifiers":["MEDGEN:1830424","OMIM:190605","UMLS:C5779878"],"synonyms":[{"name":"TPT-PS syndrome","type":"exact"}],"termid":"MONDO:0017454","xrefs":{"Monarch":{"xref_id":"0017454"}}}


id: FYPO:0000871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9me during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000871"}


id: GO:2000266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation, intrinsic pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"blood coagulation, intrinsic pathway","termid":"GO:0007597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"regulation of blood coagulation, intrinsic pathway","termid":"GO:2000266"}


id: GO:1990905
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, flexible, finger-like projection of cytoplasm containing an array of microtubles and located near the flagellar pores in some photosynthetic as well as nonphotosynthetic dinoflagellate species. Its functions are not fully understood, but it has been associated with feeding behavior (phagotrophy).","definition_xrefs":["GOC:at","PMID:1480107","Wikipedia:Dinoflagellate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate peduncle","termid":"GO:1990905"}


