# terms

id: PBO:0070510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 9","termid":"PBO:0070510"}


id: GO:0052242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052242)","synonyms":[{"name":"chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"chemotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052242"}


id: FYECO:0000102
data:
  {"alleles_by_uniquename":{"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[118993],"is_not":false,"summary":null,"term":"FYECO:0000102"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown on agar plates.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":1,"genotypes_by_uniquename":{"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"agar plates","references_by_uniquename":{"PMID:27678009":null},"single_locus_annotated_genes":["SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta"],"synonyms":[{"name":"solid agar plates","type":"exact"}],"termid":"FYECO:0000102","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYPO_EXT:0000003":null}}


id: PBO:0017541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transmembrane transporter (predicted)","termid":"PBO:0017541"}


id: PBO:0031743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_invasive_growth_(obsolete_FYPO:0000466)","termid":"PBO:0031743"}


id: GO:0045428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"regulates","term_name":"nitric oxide biosynthetic process","termid":"GO:0006809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitric oxide biosynthetic process","synonyms":[{"name":"regulation of nitric oxide anabolism","type":"exact"},{"name":"regulation of nitric oxide biosynthesis","type":"exact"},{"name":"regulation of nitric oxide formation","type":"exact"},{"name":"regulation of nitric oxide synthesis","type":"exact"}],"termid":"GO:0045428"}


id: PBO:0030995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_stress_during_vegetative_growth","termid":"PBO:0030995"}


id: PBO:0067970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 272","termid":"PBO:0067970"}


id: GO:0097744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of urate salt or uric acid from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["GOC:jl","PMID:25287933","Wikipedia:Renal_physiology#Secretion","PMID:3906799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal urate salt excretion","synonyms":[{"name":"urate excretion","type":"broad"},{"name":"urate salt excretion","type":"broad"}],"termid":"GO:0097744"}


id: PBO:0039501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 24","termid":"PBO:0039501"}


id: PBO:0048054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 3","termid":"PBO:0048054"}


id: PBO:0070968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 6","termid":"PBO:0070968"}


id: MONDO:0004735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Alagille syndrome (obsolete MONDO:0004735)","termid":"MONDO:0004735","xrefs":{"Monarch":{"xref_id":"0004735"}}}


id: GO:0031083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules. Many of the protein subunits are conserved between mouse and human; the mouse complex contains the Pallidin, Muted, Cappuccino, Dysbindin, Snapin, BLOS1, BLOS2, AND BLOS3 proteins.","definition_xrefs":["PMID:15102850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BLOC complex","termid":"GO:0031082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BLOC-1 complex","termid":"GO:0031083"}


id: GO:0019216
data:
  {"annotated_genes":["SJAG_03130","SJAG_04092","SJAG_01187","SJAG_02613","SJAG_01402","SJAG_02380","SJAG_02641","SJAG_03170","SJAG_04018","SJAG_01307","SJAG_02196","SJAG_01906","SJAG_03940","SJAG_00053","SJAG_02104","SJAG_02044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75981,117808],"is_not":false,"summary":null,"term":"GO:0019216"},{"annotations":[104133,90174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[93645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[70529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[111120,115222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[109478,112492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[117276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"},{"annotations":[109600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[94839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045834"},{"annotations":[74905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"},{"annotations":[75359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[88324,105603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01187":null,"SJAG_01307":null,"SJAG_01402":null,"SJAG_01906":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02196":null,"SJAG_02380":null,"SJAG_02613":null,"SJAG_02641":null,"SJAG_03130":null,"SJAG_03170":null,"SJAG_03940":null,"SJAG_04018":null,"SJAG_04092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2426168","Reactome:R-HSA-400206"],"synonyms":[{"name":"regulation of lipid metabolism","type":"exact"}],"termid":"GO:0019216","terms_by_termid":{"GO:0010510":null,"GO:0010895":null,"GO:0019216":null,"GO:0032443":null,"GO:0045540":null,"GO:0045717":null,"GO:0045834":null,"GO:0070452":null,"GO:0071072":null,"GO:1902647":null,"GO:1902648":null,"GO:2001211":null}}


id: PBO:0077782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase I mitochondrial","termid":"PBO:0077782"}


id: GO:2001037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tongue muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle fiber differentiation","termid":"GO:1902811"},{"relation_name":"is_a","term_name":"regulation of tongue muscle cell differentiation","termid":"GO:2001035"},{"relation_name":"positively_regulates","term_name":"tongue muscle cell differentiation","termid":"GO:0035981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tongue muscle cell differentiation","termid":"GO:2001037"}


id: PBO:0058985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT6, PHD finger containing","termid":"PBO:0058985"}


id: PBO:0043810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 2","termid":"PBO:0043810"}


id: MONDO:0100113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nonsyndromic deafness, keratitis-ichthyosis-deafness syndrome, and palmoplantar keratoderma with deafness have all been associated with autosomal dominant variants in GJB2. Reported cases share hearing loss as a feature, therefore it is likely that these phenotypes exist along a spectrum of the same disease, differing in severity of skin phenotypes.","definition_xrefs":["PMID:9856479","PMID:20583176","PMID:16059934","PMID:24945352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hearing loss with skin disease","termid":"MONDO:0100113","xrefs":{"Monarch":{"xref_id":"0100113"}}}


id: PBO:0084910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitogen-activated protein kinase (MAPK); involved in signal transduction pathways that control filamentous growth and pheromone response; regulates septum assembly, and may directly phosphorylate Bni4p; the KSS1 gene is nonfunctional in S288C strains and functional in W303 strains","termid":"PBO:0084910"}


id: PBO:0065885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB33B antisense RNA 1","termid":"PBO:0065885"}


id: PBO:0068124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 431","termid":"PBO:0068124"}


id: GO:0005565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial tRNA (obsolete GO:0005565)","synonyms":[{"name":"mitochondrial tRNA","type":"exact"}],"termid":"GO:0005565"}


id: PBO:0003985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh2 (predicted)","termid":"PBO:0003985"}


id: PBO:0028018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_CAAX-protein_geranylgeranyltransferase_activity","termid":"PBO:0028018"}


id: MONDO:0014797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 6","secondary_identifiers":["OMIM:616843","UMLS:C4225184","MEDGEN:908120"],"synonyms":[{"name":"LMPH3","type":"exact"},{"name":"generalised lymphatic dysplasia of Fotiou","type":"related"},{"name":"generalized lymphatic dysplasia of Fotiou","type":"related"},{"name":"lymphedema, hereditary, 3","type":"related"},{"name":"lymphedema, hereditary, III","type":"exact"},{"name":"lymphedema, hereditary, type III","type":"exact"}],"termid":"MONDO:0014797","xrefs":{"Monarch":{"xref_id":"0014797"}}}


id: PBO:0067711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 9","termid":"PBO:0067711"}


id: PR:O94424
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIF subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10445:SF0","PRO:DNx","OMA:SCHPO02358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIF subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.13c","secondary_identifiers":["UniProtKB:O94424"],"synonyms":[{"name":"ATP-dependent helicase TFG2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2F2","type":"exact"},{"name":"TFIIF medium subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TFIIF-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94424"}


id: GO:0140795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H3 L-arginyl (position 2)= histone H3 L-citrullyl (position 2) + NH4+, resulting in histone H3 citrullination at position 2.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 arginine deiminase activity","termid":"GO:0141057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H3R2 arginine deiminase activity","synonyms":[{"name":"H3-R2 citrullination","type":"exact"},{"name":"histone H3-R2 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H3-R2 specific)","type":"exact"}],"termid":"GO:0140795"}


id: PBO:0041314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69","termid":"PBO:0041314"}


id: SO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a leucoplast, a colorless plastid generally containing starch or oil.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucoplast_sequence","synonyms":[{"name":"leucoplast sequence","type":"exact"}],"termid":"SO:0000747"}


id: PBO:0044447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 25, pseudogene","termid":"PBO:0044447"}


id: PBO:0039727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4","termid":"PBO:0039727"}


id: MONDO:0700187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition occurring in cats characterized by solitary or multiple cutaneous nodules and papules, which may metastasize late in the course of the disease. Lesions consist of poorly circumscribed histiocytic infiltrates of the superficial and deep dermis, with variable extension into the subcutis.","definition_xrefs":["NCIT:C176702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline progressive histiocytosis","termid":"MONDO:0700187","xrefs":{"Monarch":{"xref_id":"0700187"}}}


id: PBO:0077651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 3","termid":"PBO:0077651"}


id: GO:0072540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 17 cell, a CD4-positive, alpha-beta T cell with the phenotype RORgamma-t-positive that produces IL-17.","definition_xrefs":["GOC:ebc","CL:0000899","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 cell lineage commitment","synonyms":[{"name":"T-helper 17 cell fate commitment","type":"exact"},{"name":"Th17 cell lineage commitment","type":"exact"},{"name":"Th17 fate commitment","type":"exact"}],"termid":"GO:0072540"}


id: GO:0046604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of centrosome separation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic centrosome separation","termid":"GO:0046602"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"mitotic centrosome separation","termid":"GO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic centrosome separation","synonyms":[{"name":"activation of mitotic centrosome separation","type":"narrow"},{"name":"stimulation of mitotic centrosome separation","type":"narrow"},{"name":"up regulation of mitotic centrosome separation","type":"exact"},{"name":"up-regulation of mitotic centrosome separation","type":"exact"},{"name":"upregulation of mitotic centrosome separation","type":"exact"}],"termid":"GO:0046604"}


id: FYPO:0006842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosomes containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a normal (i.e. indistinguishable from wild type) portion of the centromeric region of the chromosome. CENP-A-containing nucleosomes are assembled into chromatin around centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PMID:28904333","GO:0000729","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal spatial extent of CENP-A containing nucleosome assembly","synonyms":[{"name":"normal extent of CENP-A containing nucleosome","type":"related"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"normal spatial extent of CENP-A deposition","type":"related"},{"name":"normal spatial extent of CENP-A loading","type":"related"},{"name":"normal spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"normal spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"normal spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"normal spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"normal spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0006842"}


id: PBO:0077798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOR1B pseudogene 1","termid":"PBO:0077798"}


id: FYPO:0000262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells do not respond normally to reactive oxygen species, resulting in accumulation of oxidative damage including DNA damage, during G0 phase.","definition_xrefs":["PMID:19197239","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress","termid":"FYPO:0000180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to reactive oxygen species during G0","synonyms":[{"name":"abnormal cellular response to reactive oxygen species during cell quiescence","type":"exact"},{"name":"abnormal cellular response to reactive oxygen species during quiescence","type":"exact"},{"name":"protects against physiological oxidative damage in G0","type":"related"}],"termid":"FYPO:0000262"}


id: PBO:0040191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 4","termid":"PBO:0040191"}


id: MONDO:0033561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deeah syndrome","secondary_identifiers":["UMLS:C5436579","OMIM:619004","MEDGEN:1756624"],"synonyms":[{"name":"DEEAH","type":"related"},{"name":"DEEAH SYNDROME","type":"related"},{"name":"Developmental Delay With Endocrine, Exocrine, Autonomic, and Hematologic Abnormalities","type":"related"}],"termid":"MONDO:0033561","xrefs":{"Monarch":{"xref_id":"0033561"}}}


id: GO:0018332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient adenylylation of threonine to form N6-(phospho-5'-adenosine)-L-threonine, found in the active site of bovine phosphodiesterase I.","definition_xrefs":["RESID:AA0267"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-(phospho-5'-adenosine)-L-threonine (obsolete GO:0018332)","termid":"GO:0018332"}


id: PBO:0004052
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human BIN1","termid":"PBO:0004052"}


id: FYPO:0007521
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118892,118907,118913,118918,118921],"is_not":false,"summary":null,"term":"FYPO:0007521"}]},"cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of tacrolimus and magnesium chloride than normal.","definition_xrefs":["PomBase:mah","PMID:19625445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to tacrolimus and magnesium chloride","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck2delta","pmk1delta","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"hypersensitive to tacrolimus and magnesium chloride","type":"exact"},{"name":"resistance to FK506 and magnesium chloride","type":"exact"},{"name":"resistance to magnesium chloride and FK506","type":"exact"},{"name":"resistance to magnesium chloride and tacrolimus","type":"exact"},{"name":"resistance to tacrolimus and MgCl2","type":"exact"},{"name":"resistance to tacrolimus and magnesium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus and magnesium chloride during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus and magnesium chloride","type":"exact"},{"name":"viable in the presence of FK506 and chloride","type":"exact"},{"name":"vic","type":"related"}],"termid":"FYPO:0007521","terms_by_termid":{"FYPO:0007521":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0007372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cornea plana","termid":"MONDO:0000733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cornea plana 1, autosomal dominant","secondary_identifiers":["MESH:C565158","UMLS:C1852557","OMIM:121400","GARD:18049","MEDGEN:343837"],"synonyms":[{"name":"CNA1","type":"related"},{"name":"cornea plana 1","type":"related"},{"name":"cornea plana 1, autosomal dominant","type":"exact"}],"termid":"MONDO:0007372","xrefs":{"Monarch":{"xref_id":"0007372"}}}


id: PBO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 family regulatory subunit (predicted)","termid":"PBO:0004111"}


id: MONDO:0017936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign Samaritan congenital myopathy is a rare, genetic, skeletal muscle disease characterized by severe neonatal hypotonia with respiratory insufficiency, delay in motor milestones, and dysmorphic features including bitemporal narrowing, epicanthal folds and hypertelorism. Affected individuals show gradual improvement in hypotonia and muscle weakness within the first two years of life resulting in minimal clinical manifestations in adulthood.","definition_xrefs":["Orphanet:324581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"benign Samaritan congenital myopathy","secondary_identifiers":["UMLS:C4749502","GARD:21445","MEDGEN:1666762"],"termid":"MONDO:0017936","xrefs":{"Monarch":{"xref_id":"0017936"}}}


id: FYPO:0006623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in the plasma membrane is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatidylinositol phosphate level in plasma membrane","termid":"FYPO:0006222"},{"relation_name":"is_a","term_name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","termid":"FYPO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane","synonyms":[{"name":"decreased 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level in plasma membrane","type":"exact"},{"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in cell membrane","type":"exact"},{"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"decreased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"decreased plasma membrane PI(3,4,5)P3 level","type":"exact"},{"name":"decreased plasma membrane phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"},{"name":"reduced phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane","type":"exact"}],"termid":"FYPO:0006623"}


id: PBO:0051120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-5 (non-functional)","termid":"PBO:0051120"}


id: PBO:0059488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase B3","termid":"PBO:0059488"}


id: MONDO:0010097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Tatsumi factor deficiency","secondary_identifiers":["OMIM:272650","MEDGEN:336460","UMLS:C1848931","MESH:C564787"],"synonyms":[{"name":"Tatsumi factor deficiency","type":"exact"}],"termid":"MONDO:0010097","xrefs":{"Monarch":{"xref_id":"0010097"}}}


id: PBO:0080140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasohibin 2","termid":"PBO:0080140"}


id: PBO:0081628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 558","termid":"PBO:0081628"}


id: MONDO:0007627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Focal facial dermal dysplasia type I (FFDD1), also known as Brauer syndrome, is a focal facial dysplasia (FFDD) characterized by congenital bitemporal cutis aplasia.","definition_xrefs":["Orphanet:79133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal facial dermal dysplasia","termid":"MONDO:0018363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal facial dermal dysplasia type I","secondary_identifiers":["GARD:16524","UMLS:C5235196","MEDGEN:1718224","OMIM:136500"],"synonyms":[{"name":"Brauer syndrome","type":"exact"},{"name":"FFDD type I","type":"exact"},{"name":"FFDD, type 1","type":"related"},{"name":"FFDD1","type":"exact"},{"name":"bitemporal aplasia cutis congenita","type":"exact"},{"name":"focal facial dermal dysplasia 1, Brauer type","type":"exact"},{"name":"focal facial dermal dysplasia type 1","type":"exact"},{"name":"hereditary symmetrical aplastic nevi of temples","type":"related"}],"termid":"MONDO:0007627","xrefs":{"Monarch":{"xref_id":"0007627"}}}


id: FYPO:0005004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the anaphase-promoting complex is lower than normal.","definition_xrefs":["PMID:22906049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level in anaphase-promoting complex","synonyms":[{"name":"decreased anaphase-promoting complex protein level during vegetative growth","type":"exact"},{"name":"decreased protein level in APC","type":"exact"},{"name":"decreased protein level in anaphase-promoting complex during mitotic cell cycle","type":"related"},{"name":"decreased protein level in anaphase-promoting complex during vegetative growth","type":"exact"},{"name":"decreased protein level in cyclosome","type":"exact"},{"name":"reduced protein level in anaphase-promoting complex","type":"exact"}],"termid":"FYPO:0005004"}


id: PBO:0029369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029369"}


id: PBO:0075545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm antigen with calponin homology and coiled-coil domains 1 like","termid":"PBO:0075545"}


id: PBO:0076391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACR3 antisense RNA 1","termid":"PBO:0076391"}


id: PBO:0079556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 9","termid":"PBO:0079556"}


id: MONDO:0005051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating lobular adenocarcinoma of the breast. The malignant cells lack cohesion and are arranged individually or in a linear manner (Indian files), or as narrow trabeculae within the stroma. The malignant cells are usually smaller than those of ductal carcinoma, are less pleomorphic, and have fewer mitotic figures.","definition_xrefs":["NCIT:C7950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast lobular carcinoma","termid":"MONDO:0000552"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"invasive lobular breast carcinoma","secondary_identifiers":["MEDGEN:75994","ONCOTREE:ILC","EFO:0000553","DOID:3457","UMLS:C0279565"],"synonyms":[{"name":"breast invasive lobular carcinoma","type":"related"},{"name":"classic invasive lobular carcinoma","type":"exact"},{"name":"infiltrating lobular adenocarcinoma","type":"exact"},{"name":"infiltrating lobular breast carcinoma","type":"exact"},{"name":"infiltrating lobular carcinoma of breast","type":"exact"},{"name":"infiltrating lobular carcinoma of the breast","type":"exact"},{"name":"invasive lobular adenocarcinoma","type":"exact"},{"name":"invasive lobular breast carcinoma","type":"exact"},{"name":"invasive lobular carcinoma","type":"exact"},{"name":"invasive lobular carcinoma of breast","type":"exact"},{"name":"invasive lobular carcinoma of the breast","type":"exact"},{"name":"invasive lobular carcinoma, classic type","type":"exact"},{"name":"lobular carcinoma","type":"broad"},{"name":"lobular carcinoma (morphologic abnormality)","type":"broad"},{"name":"lobular carcinoma NOS (morphologic abnormality)","type":"broad"},{"name":"lobular carcinoma of the breast","type":"broad"}],"termid":"MONDO:0005051","xrefs":{"Monarch":{"xref_id":"0005051"}}}


id: MONDO:0012866
data:
  {"annotated_genes":["SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86813],"is_not":false,"summary":null,"term":"MONDO:0012866"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 35 is a rare form of hereditary spastic paraplegia characterized by childhood (exceptionally adolescent) onset of a complex phenotype presenting with lower limb (followed by upper limb) spasticity with hyperreflexia and extensor plantar responses, with additional manifestations including progressive dysarthria, dystonia, mild cognitive decline, extrapyramidal features, optic atrophy and seizures. White matter abnormalities and brain iron accumulation have also been observed on brain magnetic resonance imaging.","definition_xrefs":["Orphanet:171629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 35","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612319","UMLS:C3496228","DOID:0110786","SCTID:764688002","GARD:10538","MESH:C567311","NANDO:1200541","MEDGEN:501249"],"synonyms":[{"name":"FA2H hereditary spastic paraplegia","type":"exact"},{"name":"SPG35","type":"exact"},{"name":"autosomal recessive spastic paraplegia 35","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 35","type":"exact"},{"name":"hereditary spastic paraplegia 35","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in FA2H","type":"exact"},{"name":"hereditary spastic paraplegia type 35","type":"exact"},{"name":"leukodystrophy, dysmyelinating and spastic paraparesis with or without dystonia","type":"exact"},{"name":"leukodystrophy, dysmyelinating, and spastic paraparesis with or without dystonia","type":"related"},{"name":"spastic paraplegia 35, autosomal recessive","type":"related"}],"termid":"MONDO:0012866","terms_by_termid":{"MONDO:0012866":null},"xrefs":{"Monarch":{"xref_id":"0012866"}}}


id: PBO:0031028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_concentration_of_substance_in_growth_medium","termid":"PBO:0031028"}


id: GO:0051597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylmercury stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylmercury","synonyms":[{"name":"response to CH3-Hg+","type":"exact"},{"name":"response to MeHg+","type":"exact"}],"termid":"GO:0051597"}


id: PBO:0085576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 20S proteasome assembly; forms a heterodimer with Pba1p that binds to proteasome precursors; interaction with Pba1p-Add66p may affect function of the mature proteasome and its role in maintaining respiratory metabolism; similar to human PAC2 constituent of the PAC1-PAC2 complex involved in proteasome assembly","termid":"PBO:0085576"}


id: MONDO:0008432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ketone compounds, ability to smell (obsolete MONDO:0008432)","secondary_identifiers":["OMIM:182270"],"synonyms":[{"name":"ketone compounds, ability to smell","type":"exact"}],"termid":"MONDO:0008432","xrefs":{"Monarch":{"xref_id":"0008432"}}}


id: PBO:0001078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase (predicted)","termid":"PBO:0001078"}


id: MONDO:0002616
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm that arises from the mesenchyma-derived cells of the soft tissue or bone. Representative examples include lipoma, leiomyoma, leiomyosarcoma and osteosarcoma.","definition_xrefs":["NCIT:C7059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"mesenchymal cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1334699","DOID:3350","MEDGEN:277359"],"synonyms":[{"name":"benign miscellaneous mesenchymal tumor","type":"exact"},{"name":"benign miscellaneous mesenchymal tumour","type":"exact"},{"name":"mesenchymal cell neoplasm","type":"exact"},{"name":"mesenchymal cell tumor","type":"exact"},{"name":"mesenchymal cell tumour","type":"exact"},{"name":"mesenchymal neoplasm","type":"exact"},{"name":"mesenchymal tumor","type":"exact"},{"name":"mesenchymal tumour","type":"exact"}],"termid":"MONDO:0002616","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0002616"}}}


id: PBO:0076108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 16","termid":"PBO:0076108"}


id: SO:0000151
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A piece of DNA that has been inserted in a vector so that it can be propagated in a host bacterium or some other organism.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Clone_(genetics)"],"termid":"SO:0000151"}


id: GO:2000466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycogen (starch) synthase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of glycogen (starch) synthase activity","termid":"GO:2000465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycogen (starch) synthase activity","synonyms":[{"name":"negative regulation of UDP-glucose-glycogen glucosyltransferase activity","type":"exact"},{"name":"negative regulation of UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"negative regulation of UDP-glycogen synthase activity","type":"exact"},{"name":"negative regulation of UDPG-glycogen synthetase activity","type":"exact"},{"name":"negative regulation of UDPG-glycogen transglucosylase activity","type":"exact"},{"name":"negative regulation of UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"negative regulation of glycogen (starch) synthetase activity","type":"exact"},{"name":"negative regulation of uridine diphosphoglucose-glycogen glucosyltransferase activity","type":"exact"}],"termid":"GO:2000466"}


id: FYPO:0002820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in telomeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"},{"relation_name":"is_a","term_name":"abnormal histone methylation at telomere during vegetative growth","termid":"FYPO:0007375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-K9 methylation at telomere during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 methylation at telomere during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation at telomere during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 methylation at telomeric region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me at telomere during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 methylation at telomere during vegetative growth","type":"exact"},{"name":"abolished telomeric histone H3-K9 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation abolished at telomere during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation absent at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0002820"}


id: SO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes exon sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:exonic","type":"exact"},{"name":"Jannovar:exon_variant","type":"exact"},{"name":"VAAST:exon_variant","type":"exact"},{"name":"exon variant","type":"exact"},{"name":"snpEff:EXON","type":"exact"}],"termid":"SO:0001791"}


id: PBO:0072521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 50","termid":"PBO:0072521"}


id: GO:0035299
data:
  {"annotated_genes":["SJAG_01148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74536],"is_not":false,"summary":null,"term":"GO:0035299"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ATP = 1D-myo-inositol hexakisphosphate + ADP + H+.","definition_xrefs":["RHEA:20313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol pentakisphosphate kinase activity","termid":"GO:0120517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1855179","Reactome:R-HSA-1855176","KEGG_REACTION:R05202","MetaCyc:RXN-7163","EC:2.7.1.158"],"synonyms":[{"name":"IP5 2-kinase activity","type":"related"},{"name":"Ins(1,3,4,5,6)P5 2-kinase activity","type":"related"},{"name":"inositol hexakisphosphate synthase","type":"related"},{"name":"inositol pentakisphosphate 2-kinase activity","type":"exact"},{"name":"inositol polyphosphate kinase activity","type":"related"},{"name":"inositol-pentakisphosphate 2-kinase activity","type":"related"}],"termid":"GO:0035299","terms_by_termid":{"GO:0035299":null}}


id: MONDO:0015782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysmorphism-cleft palate-loose skin syndrome is a rare, genetic developmental defect during embryogenesis characterized by severe psychomotor delay, intellectual disability, congential, symmetrical circumferential skin creases of arms and legs, cleft palate, and facial dysmorphism (incl. elongated face, high forehead, blepharophimosis, short palpebral fissures, microphthalmia, microcornea, epicanthic folds, telecanthus, microtia, posteriorly angulated ears, broad nasal bridge, microstomia and micrognathia). Additional features reported include short stature, microcephaly, hypotonia, pectus excavatum, severe scoliosis, hypoplastic scrotum, and mixed hearing loss.","definition_xrefs":["Orphanet:1779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysmorphism-cleft palate-loose skin syndrome","secondary_identifiers":["GARD:2009","MEDGEN:1642311","UMLS:C4706366"],"termid":"MONDO:0015782","xrefs":{"Monarch":{"xref_id":"0015782"}}}


id: MONDO:0007900
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86237],"is_not":false,"summary":null,"term":"MONDO:0007900"}]},"cv_name":"mondo","definition":"Any inherited isolated nail anomaly in which the cause of the disease is a mutation in the PLCD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pachyonychia congenita","termid":"MONDO:0016471"},{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2555","UMLS:C0544855","ICD9:703.8","SCTID:74102009","DOID:0080081","MEDGEN:107463","MESH:C537289","OMIM:151600"],"synonyms":[{"name":"Gorlin Bushkell Jensen syndrome","type":"related"},{"name":"NDNC3","type":"related"},{"name":"PLCD1 inherited isolated nail anomaly","type":"exact"},{"name":"inherited isolated nail anomaly caused by mutation in PLCD1","type":"exact"},{"name":"leukonychia Striatus","type":"related"},{"name":"leukonychia punctata","type":"related"},{"name":"leukonychia totalis and/or partialis","type":"related"},{"name":"leukonychia totalis multiple sebaceous cysts renal calculi","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 3","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 3, (leukonychia)","type":"exact"},{"name":"nail disorder, nonsyndromic congenital, type 3","type":"exact"},{"name":"nonsyndromic congenital nail disorder type 3","type":"exact"},{"name":"porcelain nails","type":"related"}],"termid":"MONDO:0007900","terms_by_termid":{"MONDO:0007900":null},"xrefs":{"Monarch":{"xref_id":"0007900"}}}


id: PBO:0042327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD47 molecule","termid":"PBO:0042327"}


id: MONDO:0700233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by a variant in the TOPORS gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"TOPORS-related retinopathy","synonyms":[{"name":"TOPORS-related retinopathy","type":"exact"}],"termid":"MONDO:0700233","xrefs":{"Monarch":{"xref_id":"0700233"}}}


id: GO:1902930
data:
  {"annotated_genes":["SJAG_04018","SJAG_03538","SJAG_02104","SJAG_02406","SJAG_02044","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[109600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[113427,88797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[75359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[88324,105603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alcohol biosynthetic process.","definition_xrefs":["PMID:23332010","GOC:mengo_curators","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02406":null,"SJAG_03538":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of alcohol anabolism","type":"exact"},{"name":"regulation of alcohol biosynthesis","type":"exact"},{"name":"regulation of alcohol formation","type":"exact"},{"name":"regulation of alcohol synthesis","type":"exact"},{"name":"regulation of solventogenesis","type":"broad"}],"termid":"GO:1902930","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null,"GO:0090180":null}}


id: GO:0061541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a rhabdomere are generated and organized. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments.","definition_xrefs":["PMID:22113834","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"photoreceptor cell morphogenesis","termid":"GO:0008594"},{"relation_name":"part_of","term_name":"rhabdomere development","termid":"GO:0042052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhabdomere morphogenesis","termid":"GO:0061541"}


id: PATO:0001948
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A grooved texture quality inhering in a bearer by virtue of the bearer's being marked by two or more parallel channels.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grooved","termid":"PATO:0002255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"furrowed","synonyms":[{"name":"fluted","type":"related"}],"termid":"PATO:0001948"}


id: PBO:0063771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 2 pseudogene 2","termid":"PBO:0063771"}


id: PR:Q9P376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase II subunit A C-terminal domain phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23081:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A C-terminal domain phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.05c","secondary_identifiers":["UniProtKB:Q9P376"],"synonyms":[{"name":"CTD phosphatase fcp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC19B12.05c","type":"related"},{"name":"Spom972h-CTDP1","type":"exact"}],"termid":"PR:Q9P376"}


id: GO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the selection of the specific location within the template strand of an RNA polymerase III promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcriptional start site selection","termid":"GO:0001173"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase III promoter","termid":"GO:0006384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transcriptional start site selection at RNA polymerase III promoter","termid":"GO:0001175"}


id: FYPO:0003525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the addition of actin monomers to a filament occurs to a greater extent than normal at one or both cell tips.","definition_xrefs":["PMID:24954052","GO:0030041","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization at cell tip","termid":"FYPO:0003524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0004803","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased actin filament polymerization at cell tip","synonyms":[{"name":"increased actin filament polymerisation at cell tip","type":"exact"},{"name":"increased actin filament polymerization at cell end","type":"exact"},{"name":"increased actin filament polymerization at cell tip during mitotic cell cycle","type":"related"},{"name":"increased actin filament polymerization at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003525"}


id: GO:0007231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated in response to osmotic change.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"osmosensory signaling pathway","synonyms":[{"name":"osmolarity sensing","type":"exact"},{"name":"osmolarity sensing signaling pathway","type":"exact"},{"name":"osmolarity sensing signalling pathway","type":"exact"},{"name":"osmosensory signal transduction","type":"exact"},{"name":"osmosensory signalling pathway","type":"exact"},{"name":"signal transduction during osmotic stress","type":"exact"}],"termid":"GO:0007231"}


id: PBO:0044210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin S","termid":"PBO:0044210"}


id: GO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that takes place mainly in germinal center B cells in which a large number of mutations are generated in the heavy chain and light chain V-region genes and their immediately surrounding introns in order to increase antibody diversity and contribute to affinity maturation.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor editing","termid":"GO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0010467","GO:0006259"],"is_obsolete":false,"name":"peripheral B cell receptor editing","synonyms":[{"name":"peripheral B lymphocyte receptor editing","type":"exact"},{"name":"peripheral B-cell receptor editing","type":"exact"},{"name":"peripheral B-lymphocyte receptor editing","type":"exact"}],"termid":"GO:0002345"}


id: PBO:0062967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 10","termid":"PBO:0062967"}


id: MONDO:0100356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of a genetic disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"classic or non-classic genetic disease presentation","termid":"MONDO:0100355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classic presentation","termid":"MONDO:0100356","xrefs":{"Monarch":{"xref_id":"0100356"}}}


id: GO:0033434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AUC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"AUC codon-amino acid adaptor activity","synonyms":[{"name":"ATC codon-amino acid adaptor activity","type":"exact"},{"name":"isoleucine tRNA","type":"related"}],"termid":"GO:0033434"}


id: MONDO:0007958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of thyroid medullary carcinoma that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medullary thyroid gland carcinoma","termid":"MONDO:0015277"},{"relation_name":"is_a","term_name":"multiple endocrine neoplasia type 2","termid":"MONDO:0019003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial medullary thyroid carcinoma","secondary_identifiers":["OMIM:155240","GARD:16901","MESH:C536911","MEDGEN:322311","Orphanet:99361","NCIT:C46099","UMLS:C1833921","DOID:0050547"],"synonyms":[{"name":"Fmtc","type":"related"},{"name":"MTC","type":"related"},{"name":"Mtc1","type":"related"},{"name":"familial MTC","type":"exact"},{"name":"familial medullary thyroid carcinoma","type":"exact"},{"name":"hereditary medullary thyroid gland carcinoma","type":"exact"},{"name":"hereditary thyroid medullary carcinoma","type":"exact"},{"name":"medullary thyroid carcinoma","type":"broad"},{"name":"thyroid carcinoma, familial medullary","type":"exact"}],"termid":"MONDO:0007958","xrefs":{"Monarch":{"xref_id":"0007958"}}}


id: PBO:0056551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCL1 apoptosis regulator, BCL2 family member","termid":"PBO:0056551"}


id: GO:0009452
data:
  {"annotated_genes":["SJAG_04034","SJAG_04488","SJAG_01724","SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75358,68457,72149,107446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[59909],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which the RNA 5' cap structure, an inverted 7-methylguanosine linked via a 5'-5' triphosphate bridge (m7G(5')ppp(5')X) to the first transcribed residue, is added to a nascent transcript. Additional methylation can occur on the ribose sugars of the first and second nucleotides adjacent to the m7G nRNA cap. These methylations are often referred to as N6,2'-O-dimethyladenosine (m6,2A) and N6,2'-O-dimethylguanosine (m6,2G), respectively.","definition_xrefs":["PMID:9266685","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_01724":null,"SJAG_04034":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"7-methylguanosine RNA capping","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA capping","type":"broad"},{"name":"m(7)G RNA capping","type":"exact"}],"termid":"GO:0009452","terms_by_termid":{"GO:0006370":null,"GO:0106005":null}}


id: PR:Q09877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sif3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sad1-interacting factor 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.15","synonyms":[{"name":"Spom972h-sif3","type":"exact"}],"termid":"PR:Q09877"}


id: GO:0050446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aniline + N,N-dimethyl-1,4-phenylenediamine + 2 NADP+ = 4-(dimethylamino)azobenzene + 2 H+ + 2 NADPH.","definition_xrefs":["RHEA:16269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"azobenzene reductase activity","secondary_identifiers":["UM-BBD_reactionID:r0808","EC:1.7.1.6","MetaCyc:AZOBENZENE-REDUCTASE-RXN"],"synonyms":[{"name":"N,N-dimethyl-1,4-phenylenediamine, aniline:NADP+ oxidoreductase activity","type":"related"},{"name":"N,N-dimethyl-4-phenylazoaniline azoreductase activity","type":"related"},{"name":"NAD(P)H:1-(4'-sulfophenylazo)-2-naphthol oxidoreductase activity","type":"related"},{"name":"NADPH-dependent azoreductase activity","type":"broad"},{"name":"NADPH2-dependent azoreductase activity","type":"related"},{"name":"NADPH2:4-(dimethylamino)azobenzene oxidoreductase activity","type":"related"},{"name":"NADPH:4-(dimethylamino)azobenzene oxidoreductase activity","type":"related"},{"name":"NC-reductase activity","type":"narrow"},{"name":"New coccine (NC)-reductase activity","type":"narrow"},{"name":"azo reductase activity","type":"broad"},{"name":"azo-dye reductase activity","type":"broad"},{"name":"azoreductase activity","type":"broad"},{"name":"dibromopropylaminophenylazobenzoic azoreductase activity","type":"related"},{"name":"dimethylaminobenzene reductase activity","type":"related"},{"name":"methyl red azoreductase activity","type":"narrow"},{"name":"new coccine (NC)-reductase","type":"related"},{"name":"nicotinamide adenine dinucleotide (phosphate) azoreductase activity","type":"related"},{"name":"orange I azoreductase activity","type":"narrow"},{"name":"orange II azoreductase activity","type":"narrow"},{"name":"p-aminoazobenzene reductase activity","type":"related"},{"name":"p-dimethylaminoazobenzene azoreductase activity","type":"related"}],"termid":"GO:0050446"}


id: PBO:0110473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPSF6 pseudogene 1","termid":"PBO:0110473"}


id: GO:0032899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of a neurotrophin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"neurotrophin production","termid":"GO:0032898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neurotrophin production","termid":"GO:0032899"}


id: GO:0032090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Pyrin (PAAD/DAPIN) domain, a protein-protein interaction domain that has the same fold as the Death domain.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"Pyrin domain binding","synonyms":[{"name":"DAPIN domain binding","type":"exact"},{"name":"PAAD domain binding","type":"exact"}],"termid":"GO:0032090"}


id: PBO:0043939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB regulated transcription coactivator 3","termid":"PBO:0043939"}


id: GO:1900438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:1900437"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"narrow"}],"termid":"GO:1900438"}


id: GO:0015857
data:
  {"annotated_genes":["SJAG_03970","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87852],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[95294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The directed movement of uracil, 2,4-dioxopyrimidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"uracil transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015857","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: PATO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000010 relative speed (obsolete PATO:0000010)","termid":"PATO:0000010"}


id: PBO:0080640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 87B, pseudogene","termid":"PBO:0080640"}


id: PBO:0081759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 689","termid":"PBO:0081759"}


id: PBO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein","termid":"PBO:0000933"}


id: PBO:0003774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CHY type zinc finger protein","termid":"PBO:0003774"}


id: PBO:0034212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_model","termid":"PBO:0034212"}


id: PBO:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological role published","termid":"PBO:0000001"}


id: MONDO:1011777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic hepatic encephalopathy, non-human animal","secondary_identifiers":["OMIA:000816"],"termid":"MONDO:1011777","xrefs":{"Monarch":{"xref_id":"1011777"}}}


id: MONDO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized non-invasive adenocarcinoma of the lung measuring 3 cm or less. It is characterized by a pure lepidic growth pattern and the lack of stromal, vascular, or pleural invasion.","definition_xrefs":["NCIT:C136486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma in situ","termid":"MONDO:0003218"},{"relation_name":"is_a","term_name":"lung carcinoma in situ","termid":"MONDO:0004660"},{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung adenocarcinoma in situ","secondary_identifiers":["NCIT:C8748","ONCOTREE:LAIS","DOID:0050870","MEDGEN:1620128","UMLS:C4521520"],"synonyms":[{"name":"adenosquamous cell carcinoma in situ of lung","type":"related"},{"name":"adenosquamous cell carcinoma in situ of the lung","type":"related"},{"name":"bronchioalveolar carcinoma","type":"related"},{"name":"bronchioloalveolar carcinoma","type":"narrow"},{"name":"in situ pulmonary adenocarcinoma","type":"related"},{"name":"lung adenocarcinoma In situ","type":"exact"},{"name":"lung adenosquamous cell carcinoma in situ","type":"related"},{"name":"stage 0 adenosquamous cell carcinoma of lung","type":"related"},{"name":"stage 0 adenosquamous cell carcinoma of the lung","type":"related"},{"name":"stage 0 adenosquamous cell lung carcinoma","type":"related"},{"name":"stage 0 adenosquamous lung cancer","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v6","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v6 and v7","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v7","type":"related"}],"termid":"MONDO:0000503","xrefs":{"Monarch":{"xref_id":"0000503"}}}


id: MONDO:0020028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare respiratory allergy.","gene_count":0,"genotype_count":0,"name":"obsolete rare allergic respiratory disease (obsolete MONDO:0020028)","secondary_identifiers":["Orphanet:98052"],"synonyms":[{"name":"rare allergic respiratory disease","type":"exact"},{"name":"rare respiratory allergy","type":"exact"}],"termid":"MONDO:0020028","xrefs":{"Monarch":{"xref_id":"0020028"}}}


id: PBO:0088714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter family","termid":"PBO:0088714"}


id: MONDO:0010145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tibia, absence of, with congenital deafness","secondary_identifiers":["MEDGEN:336413","OMIM:275230","MESH:C564764","UMLS:C1848758"],"synonyms":[{"name":"tibia, absence of, with congenital deafness","type":"exact"}],"termid":"MONDO:0010145","xrefs":{"Monarch":{"xref_id":"0010145"}}}


id: MONDO:0005277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common, severe type of vascular headache often associated with increased sympathetic activity, resulting in nausea, vomiting, and light sensitivity.","definition_xrefs":["NCIT:C89715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"hypnic headache","termid":"MONDO:0017181"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine disorder","secondary_identifiers":["ICD9:346.9","UMLS:C0149931","MEDGEN:57451","DOID:6364","ICD9:346","MESH:D008881"],"synonyms":[{"name":"migraine","type":"exact"},{"name":"migraine disorder","type":"exact"},{"name":"migraine headache","type":"exact"},{"name":"migraine variant","type":"exact"},{"name":"migraine with or without aura","type":"exact"}],"termid":"MONDO:0005277","xrefs":{"Monarch":{"xref_id":"0005277"}}}


id: PBO:0077626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol methyltransferase 1A","termid":"PBO:0077626"}


id: GO:0031919
data:
  {"annotated_genes":["SJAG_03808","SJAG_03652","SJAG_02962","SJAG_02152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89901,118490,89902,117212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[117213,89903,118491,89904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[117214,89906,89905,118492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"}]},"cv_name":"biological_process","definition":"The directed movement of any of the vitamin B6 compounds -- pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate -- into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vitamin B6 transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031919","terms_by_termid":{"GO:1903090":null,"GO:1903091":null,"GO:1903092":null}}


id: PBO:0073036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 1","termid":"PBO:0073036"}


id: MONDO:0019627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital alacrima is characterized by deficient lacrimation (ranging from a complete absence of tears to hyposecretion of tears) that is present from birth.","definition_xrefs":["Orphanet:91416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated congenital alacrima","secondary_identifiers":["MEDGEN:896261","UMLS:C4273963","SCTID:717262004","GARD:16799"],"synonyms":[{"name":"nonsyndromic congenital alacrima","type":"exact"}],"termid":"MONDO:0019627","xrefs":{"Monarch":{"xref_id":"0019627"}}}


id: GO:0150017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the basal pole of a neuron (e.g. in bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon), and which is the closest to the cell body of the neuron (the soma).","definition_xrefs":["GOC:aruk","GOC:bc","PMID:17046728","PMID:1720142","PMID:22683681","PMID:9214543","PMID:16899232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal dendrite","termid":"GO:0097441"},{"relation_name":"is_a","term_name":"proximal dendrite","termid":"GO:1990635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal proximal dendrite","termid":"GO:0150017"}


id: MONDO:1012349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"recessive hypotrichosis, non-human animal","termid":"MONDO:1011747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recessive hypotrichosis, pig","secondary_identifiers":["OMIA:001279-9823"],"termid":"MONDO:1012349","xrefs":{"Monarch":{"xref_id":"1012349"}}}


id: PBO:0076028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 25","termid":"PBO:0076028"}


id: PBO:0063912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha","termid":"PBO:0063912"}


id: PBO:0070791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 21","termid":"PBO:0070791"}


id: PBO:0085955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant lacks mitochondrial DNA and cannot grow on glycerol; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085955"}


id: PBO:0081497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 395","termid":"PBO:0081497"}


id: PBO:0067341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 435, pseudogene","termid":"PBO:0067341"}


id: PBO:0003270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase involved in endocytosis (predicted)","termid":"PBO:0003270"}


id: MONDO:0043985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation that includes the brain, spinal cord and surrounding tissues secondary to systemic lupus erythematosus (SLE); it is associated with neurological and/or psychiatric features.","definition_xrefs":["NCIT:C116919"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"},{"relation_name":"excluded_subClassOf","term_name":"meningoencephalitis","termid":"MONDO:0005845"},{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"central nervous system lupus","secondary_identifiers":["MEDGEN:156265","MESH:D020945","UMLS:C0752332"],"synonyms":[{"name":"CNS lupus","type":"exact"},{"name":"Meningoencephalitides, lupus","type":"related"},{"name":"central nervous system lupus","type":"exact"},{"name":"central nervous system lupus vasculitis","type":"related"},{"name":"central nervous system systemic lupus Erythematosis","type":"related"},{"name":"lupus Meningoencephalitides","type":"related"},{"name":"lupus meningoencephalitis","type":"related"},{"name":"meningoencephalitis, lupus","type":"related"},{"name":"neuropsychiatric systemic lupus erythematosus","type":"related"},{"name":"systemic lupus Erythematosis, central nervous system","type":"related"}],"termid":"MONDO:0043985","xrefs":{"Monarch":{"xref_id":"0043985"}}}


id: MONDO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypotrichosis that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eyelid degenerative disorder","termid":"MONDO:0000941"},{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hypotrichosis of eyelid","secondary_identifiers":["SCTID:70738004","DOID:11671","UMLS:C0155214","MEDGEN:509854","ICD9:374.55"],"synonyms":[{"name":"eyelid hypotrichosis","type":"exact"}],"termid":"MONDO:0001335","xrefs":{"Monarch":{"xref_id":"0001335"}}}


id: GO:0008994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnulose 1-phosphate = glycerone phosphate + (S)-lactaldehyde.","definition_xrefs":["EC:4.1.2.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rhamnulose-1-phosphate aldolase activity","secondary_identifiers":["MetaCyc:RHAMNULPALDOL-RXN","RHEA:19689"],"synonyms":[{"name":"L-rhamnulose 1-phosphate aldolase activity","type":"related"},{"name":"L-rhamnulose-1-phosphate S-lactaldehyde-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"L-rhamnulose-1-phosphate lactaldehyde-lyase activity","type":"related"},{"name":"L-rhamnulose-phosphate aldolase activity","type":"related"},{"name":"rhamnulose phosphate aldolase activity","type":"related"}],"termid":"GO:0008994"}


id: PR:Q9Y7K5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.03 gene.","definition_xrefs":["UniProtKB:Q9Y7K5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C2A9.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.03","synonyms":[{"name":"Spom972h-SPBC2A9.03","type":"exact"}],"termid":"PR:Q9Y7K5"}


id: GO:0070986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the left/right axis. The left/right axis is defined by a line that runs orthogonal to both the anterior/posterior and dorsal/ventral axes. Each side is defined from the viewpoint of the organism rather of the observer (as per anatomical axes).","definition_xrefs":["GOC:mah","GOC:dph","GOC:gvg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"left/right pattern formation","termid":"GO:0060972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left/right axis specification","synonyms":[{"name":"left-right axis specification","type":"exact"},{"name":"left/right axis determination","type":"related"}],"termid":"GO:0070986"}


id: GO:0010150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The last stage of leaf development during which programmed degradation of macromolecules and nutrient recycling take place.","definition_xrefs":["PMID:17177638","ISBN:0387987819","PMID:34938309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ senescence","termid":"GO:0090693"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf senescence","termid":"GO:0010150"}


id: FYPO:0005920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is normal (i.e. indistinguishable from wild type) at tRNA genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:21437270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning","termid":"FYPO:0000856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleosome occupancy at tRNA genes","synonyms":[{"name":"normal nucleosome occupancy at tRNA genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome occupancy at tRNA genes during vegetative growth","type":"exact"},{"name":"normal nucleosome occupancy in tRNA genes","type":"exact"}],"termid":"FYPO:0005920"}


id: PBO:0073010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 10","termid":"PBO:0073010"}


id: PBO:0053401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 331","termid":"PBO:0053401"}


id: PBO:0063390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6-AHRR readthrough (NMD candidate)","termid":"PBO:0063390"}


id: GO:0018337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-2',4',5'-topaquinone (obsolete GO:0018337)","synonyms":[{"name":"enzyme active site formation via L-2',4',5'-topaquinone","type":"exact"}],"termid":"GO:0018337"}


id: MONDO:0018162
data:
  {"annotated_genes":["SJAG_02313","SJAG_04449","SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[86649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[86691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011152"},{"annotations":[86294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012596"},{"annotations":[85714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013531"}]},"cv_name":"mondo","definition":"Serine-deficiency syndrome is a very rare infantile-onset potentially treatable neurometabolic disorder characterized clinically by microcephaly, neurodevelopmental disorders and seizures. Three serine-deficiency syndromes have been described: 3-phosphoglycerate dehydrogenase (3-PGDH) deficiency, 3-phosphoserine phosphatase (3-PSP) deficiency, and phosphoserine aminotransferase deficiency.","definition_xrefs":["Orphanet:35705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn serine deficiency","termid":"MONDO:0000421"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null,"SJAG_04449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"neurometabolic disorder due to serine deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680148","MEDGEN:1842451","GARD:18815"],"synonyms":[{"name":"neurometabolic disorder due to serine deficiency","type":"exact"},{"name":"serine deficiency","type":"exact"}],"termid":"MONDO:0018162","terms_by_termid":{"MONDO:0009736":null,"MONDO:0011152":null,"MONDO:0012596":null,"MONDO:0013531":null,"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0018162"}}}


id: _global:occupancy
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"A number representing what proportion of copies of the protein have the modification.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occupancy","termid":"_global:occupancy"}


id: FYPO:0003883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of sanglifehrin A binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased sanglifehrin A binding","termid":"FYPO:0003883"}


id: PBO:0049567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 3","termid":"PBO:0049567"}


id: RO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"before_or_simultaneous_with","termid":"RO:0002081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simultaneous_with","termid":"RO:0002082"}


id: PBO:0072597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"round spermatid basic protein 1 like","termid":"PBO:0072597"}


id: GO:0060497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information between a mesenchymal cell and an endodermal cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal-endodermal cell signaling","synonyms":[{"name":"mesenchymal-endodermal cell signalling","type":"exact"}],"termid":"GO:0060497"}


id: MONDO:1012244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone degeneration, non-human animal","termid":"MONDO:1011981"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone degeneration, domestic guinea pig","secondary_identifiers":["OMIA:000880-10141"],"termid":"MONDO:1012244","xrefs":{"Monarch":{"xref_id":"1012244"}}}


id: GO:0003209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cardiac atrium is generated and organized. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"cardiac atrium development","termid":"GO:0003230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac atrium morphogenesis","termid":"GO:0003209"}


id: GO:1902510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic DNA fragmentation.","definition_xrefs":["GOC:hjd","PMID:15572351","PMID:15723341","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA catabolic process","termid":"GO:1903624"},{"relation_name":"regulates","term_name":"apoptotic DNA fragmentation","termid":"GO:0006309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of apoptotic DNA fragmentation","synonyms":[{"name":"regulation of DNA catabolic process during apoptosis","type":"exact"},{"name":"regulation of DNA catabolism during apoptosis","type":"exact"},{"name":"regulation of DNA fragmentation","type":"broad"},{"name":"regulation of DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"regulation of chromatinolysis","type":"broad"},{"name":"regulation of endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"}],"termid":"GO:1902510"}


id: MONDO:0018801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital bilateral absence of the vas deferens (CBAVD) is a condition leading to male infertility.","definition_xrefs":["Orphanet:48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bilateral absence of vas deferens","secondary_identifiers":["ICD9:752.89","OMIMPS:277180","DOID:0111862","UMLS:C1865433","GARD:5461","SCTID:275416002","MedDRA:10010670","MEDGEN:400764"],"synonyms":[{"name":"congenital bilateral agenesis of vas deferens","type":"exact"},{"name":"congenital bilateral aplasia of vas deferens","type":"exact"}],"termid":"MONDO:0018801","xrefs":{"Monarch":{"xref_id":"0018801"}}}


id: FYPO:0003581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Kms1 accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:24943839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Kms1 foci","synonyms":[{"name":"increased number of Kms1 foci during mitotic cell cycle","type":"related"},{"name":"increased number of Kms1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0003581"}


id: PBO:0032752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic inner centromere protein, shugoshin, Sgo1","termid":"PBO:0032752"}


id: PBO:0042620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDV3 pseudogene 1","termid":"PBO:0042620"}


id: FYPO:0001646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of glutamate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal glutamate import","synonyms":[{"name":"abnormal L-glutamate import","type":"exact"},{"name":"abnormal L-glutamate import across plasma membrane","type":"exact"},{"name":"abnormal glutamate import into cell","type":"exact"},{"name":"abnormal glutamate uptake","type":"exact"}],"termid":"FYPO:0001646"}


id: PBO:0027514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleolus_during_mitosis","termid":"PBO:0027514"}


id: MONDO:0017644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare tremor disorder (obsolete MONDO:0017644)","secondary_identifiers":["Orphanet:306712"],"termid":"MONDO:0017644","xrefs":{"Monarch":{"xref_id":"0017644"}}}


id: MONDO:0002551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellopontine angle tumor","termid":"MONDO:0002553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"c-P angle neurinoma","secondary_identifiers":["NCIT:C5413","UMLS:C1332905","DOID:3199","MEDGEN:232046"],"synonyms":[{"name":"cerebellar Pontine angle neurinoma","type":"exact"},{"name":"cerebellopontine angle neurinoma","type":"exact"},{"name":"cerebellopontine angle schwannoma","type":"exact"}],"termid":"MONDO:0002551","xrefs":{"Monarch":{"xref_id":"0002551"}}}


id: PBO:0065678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type Z2","termid":"PBO:0065678"}


id: PBO:0038825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 32","termid":"PBO:0038825"}


id: GO:0060847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of an endothelial cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"endothelial cell fate commitment","termid":"GO:0060839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell fate specification","termid":"GO:0060847"}


id: GO:0102251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10'-apo-beta-carotenal + O2 = 13-apo-beta-carotenone + 4-methylocta-2,4,6-trienedial.","definition_xrefs":["EC:1.13.11.70","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"all-trans-beta-apo-10'-carotenal cleavage oxygenase activity","secondary_identifiers":["MetaCyc:RXN-12393","RHEA:26401"],"termid":"GO:0102251"}


id: GO:0018715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-phenanthrol + UDP-glucuronate = 9-phenanthryl-beta-D-glucuronide + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-phenanthrol UDP-glucuronosyltransferase activity (obsolete GO:0018715)","termid":"GO:0018715"}


id: GO:2000992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of galactomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of galactomannan catabolic process","termid":"GO:2000991"},{"relation_name":"negatively_regulates","term_name":"galactomannan catabolic process","termid":"GO:0051682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of galactomannan catabolic process","termid":"GO:2000992"}


id: FYPO:0000459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between centromeres of sister chromatids is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000337","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic centromeric sister chromatid cohesion","synonyms":[{"name":"abnormal centromeric sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"abnormal centromeric sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"abnormal sister chromatid cohesion at centromere during mitosis","type":"exact"}],"termid":"FYPO:0000459"}


id: GO:0021661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 4 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:curators","GOC:dph","GOC:jid","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 4 development","termid":"GO:0021570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}


id: MONDO:0022791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coarse face hypotonia constipation","synonyms":[{"name":"Sondheimer syndrome","type":"related"}],"termid":"MONDO:0022791","xrefs":{"Monarch":{"xref_id":"0022791"}}}


id: GO:1905429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycine stimulus.","definition_xrefs":["GO_REF:0000071","PMID:18984164","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glycine","synonyms":[{"name":"response to Gly","type":"exact"},{"name":"response to aminoacetic acid","type":"exact"},{"name":"response to aminoethanoic acid","type":"exact"},{"name":"response to glycin","type":"exact"}],"termid":"GO:1905429"}


id: GO:0039621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=13 symmetry. The T=13 capsid is composed of 12 pentameric and 120 hexameric capsomeres.","definition_xrefs":["VZ:260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=13 icosahedral viral capsid","termid":"GO:0039621"}


id: FYECO:0000178
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which methionine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ met","synonyms":[{"name":"M added","type":"related"},{"name":"methionine added","type":"exact"}],"termid":"FYECO:0000178"}


id: GO:0071793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bacillithiol, the alpha-anomeric glycoside of L-cysteinyl-D-glucosamine with L-malic acid. Bacillithiol, produced widely in the Firmicutes and sporadically in other bacterial lineages, is a low-molecular-weight thiol analogous to mycothiol in the Actinomycetes and glutathione in many species.","definition_xrefs":["GOC:dh","PMID:20308541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"bacillithiol metabolic process","termid":"GO:0071792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"bacillithiol biosynthetic process","synonyms":[{"name":"bacillithiol anabolism","type":"exact"},{"name":"bacillithiol biosynthesis","type":"exact"},{"name":"bacillithiol formation","type":"exact"},{"name":"bacillithiol synthesis","type":"exact"}],"termid":"GO:0071793"}


id: MONDO:0006032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the urinary bladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystitis","secondary_identifiers":["DOID:1679","UMLS:C0010692","EFO:1000025","ICD9:595.89","icd11.foundation:1181120673","NCIT:C26738","ICD9:595.9","MESH:D003556","SCTID:38822007","MEDGEN:8227","ICD9:595"],"synonyms":[{"name":"bladder infection","type":"exact"},{"name":"inflammation of urinary bladder","type":"exact"},{"name":"urinary bladder inflammation","type":"exact"}],"termid":"MONDO:0006032","xrefs":{"Monarch":{"xref_id":"0006032"}}}


id: GO:0006140
data:
  {"annotated_genes":["SJAG_00685","SJAG_02785","SJAG_04422","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75818,72857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[117745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"},{"annotations":[89451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[69868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[75817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02785":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nucleotide metabolism","type":"exact"}],"termid":"GO:0006140","terms_by_termid":{"GO:0006110":null,"GO:0043456":null,"GO:0045820":null,"GO:1905707":null,"GO:1905857":null}}


id: GO:0042363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"vitamin catabolic process","termid":"GO:0009111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fat-soluble vitamin catabolic process","synonyms":[{"name":"fat-soluble vitamin breakdown","type":"exact"},{"name":"fat-soluble vitamin catabolism","type":"exact"},{"name":"fat-soluble vitamin degradation","type":"exact"}],"termid":"GO:0042363"}


id: PBO:0038774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T2","termid":"PBO:0038774"}


id: MONDO:1011589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, cattle","secondary_identifiers":["OMIA:000817-9913"],"termid":"MONDO:1011589","xrefs":{"Monarch":{"xref_id":"1011589"}}}


id: GO:0015113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite (NO2-) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015113"}


id: MONDO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An labyrinthitis caused by infection with Viruses.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"},{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"ear infection","termid":"MONDO:0021666"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral labyrinthitis","secondary_identifiers":["ICD9:386.35","MEDGEN:509997","DOID:12357","SCTID:409711008","UMLS:C0155508"],"synonyms":[{"name":"Viruses caused labyrinthitis","type":"exact"},{"name":"Viruses labyrinthitis","type":"exact"},{"name":"epidemic vertigo","type":"exact"},{"name":"epidemic vertigo (finding)","type":"exact"}],"termid":"MONDO:0001507","xrefs":{"Monarch":{"xref_id":"0001507"}}}


id: PBO:0060041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 29","termid":"PBO:0060041"}


id: GO:0034328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a decanoyl (CH3-[CH2]8-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"decanoyltransferase activity","termid":"GO:0034328"}


id: PR:Q9Y7Q7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC297.05 gene.","definition_xrefs":["UniProtKB:Q9Y7Q7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain-containing protein C297.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.05","synonyms":[{"name":"Spom972h-SPCC297.05","type":"exact"}],"termid":"PR:Q9Y7Q7"}


id: GO:0000909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a fruiting body organ over time, from its formation to the mature structure. The fruiting body is a spore bearing structure. In fungi, the sporocarp (also known as fruiting body) is a multicellular structure on which spore-producing structures, such as basidia or asci, are borne. The fruiting body is part of the sexual phase of a fungal life cycle, with the rest of the life cycle being characterized by vegetative mycelial growth. The sporocarp of a basidiomycete is known as a basidiocarp, while the fruiting body of an ascomycete is known as an ascocarp. A significant range of different shapes and morphologies is found in both basidiocarps and ascocarps; these features play an important role in the identification and taxonomy of fungi.","definition_xrefs":["GOC:clt","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocarp development","termid":"GO:0030584"},{"relation_name":"part_of","term_name":"sexual reproduction","termid":"GO:0019953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocarp development involved in sexual reproduction","synonyms":[{"name":"ascus development","type":"narrow"},{"name":"fruiting body development involved in sexual reproduction","type":"broad"},{"name":"fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"perfect stage fruiting body development","type":"narrow"}],"termid":"GO:0000909"}


id: FYPO:0002637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hygromycin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on hygromycin B","synonyms":[{"name":"normal cell population growth in presence of hygromycin B","type":"exact"},{"name":"normal cell population growth on hygromycin B","type":"exact"},{"name":"normal vegetative cell population growth on hygromycin B","type":"exact"}],"termid":"FYPO:0002637"}


id: GO:0015774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of polysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transport","termid":"GO:0008643"},{"relation_name":"part_of","term_name":"polysaccharide localization","termid":"GO:0033037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"polysaccharide transport","termid":"GO:0015774"}


id: GO:1900975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tatiopterin biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of tatiopterin biosynthetic process","termid":"GO:1900974"},{"relation_name":"is_a","term_name":"negative regulation of tatiopterin metabolic process","termid":"GO:1900978"},{"relation_name":"negatively_regulates","term_name":"tatiopterin biosynthetic process","termid":"GO:1900870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0042559"},{"rel_name":"regulates","termid":"GO:0042559"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0042559","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tatiopterin biosynthetic process","synonyms":[{"name":"down regulation of tatiopterin anabolism","type":"exact"},{"name":"down regulation of tatiopterin biosynthesis","type":"exact"},{"name":"down regulation of tatiopterin biosynthetic process","type":"exact"},{"name":"down regulation of tatiopterin formation","type":"exact"},{"name":"down regulation of tatiopterin synthesis","type":"exact"},{"name":"down-regulation of tatiopterin anabolism","type":"exact"},{"name":"down-regulation of tatiopterin biosynthesis","type":"exact"},{"name":"down-regulation of tatiopterin biosynthetic process","type":"exact"},{"name":"down-regulation of tatiopterin formation","type":"exact"},{"name":"down-regulation of tatiopterin synthesis","type":"exact"},{"name":"downregulation of tatiopterin anabolism","type":"exact"},{"name":"downregulation of tatiopterin biosynthesis","type":"exact"},{"name":"downregulation of tatiopterin biosynthetic process","type":"exact"},{"name":"downregulation of tatiopterin formation","type":"exact"},{"name":"downregulation of tatiopterin synthesis","type":"exact"},{"name":"inhibition of tatiopterin anabolism","type":"exact"},{"name":"inhibition of tatiopterin biosynthesis","type":"exact"},{"name":"inhibition of tatiopterin biosynthetic process","type":"narrow"},{"name":"inhibition of tatiopterin formation","type":"exact"},{"name":"inhibition of tatiopterin synthesis","type":"exact"},{"name":"negative regulation of tatiopterin anabolism","type":"exact"},{"name":"negative regulation of tatiopterin biosynthesis","type":"exact"},{"name":"negative regulation of tatiopterin formation","type":"exact"},{"name":"negative regulation of tatiopterin synthesis","type":"exact"}],"termid":"GO:1900975"}


id: MONDO:0009784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ophthalmoplegic neuromuscular disorder with abnormal mitochondria","secondary_identifiers":["MESH:C564925","OMIM:258470","MEDGEN:340508","UMLS:C1850302"],"synonyms":[{"name":"ophthalmoplegic neuromuscular disorder with abnormal mitochondria","type":"exact"}],"termid":"MONDO:0009784","xrefs":{"Monarch":{"xref_id":"0009784"}}}


id: GO:0051874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine-1-phosphate metabolic process","termid":"GO:0006668"},{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphinganine-1-phosphate catabolic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate catabolic process","type":"exact"},{"name":"dihydrosphingosine-1-phosphate catabolism","type":"exact"}],"termid":"GO:0051874"}


id: GO:0003022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of hydrogen ions are received and are converted to a molecular signal by chemoreceptors.","definition_xrefs":["ISBN:0323031951","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hydrogen ion","termid":"GO:0003030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of pH by chemoreceptor signaling","synonyms":[{"name":"detection of pH by chemoreceptor signalling","type":"exact"}],"termid":"GO:0003022"}


id: PBO:0049043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 34","termid":"PBO:0049043"}


id: GO:0008662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose 1-phosphate = ADP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-phosphofructokinase activity","secondary_identifiers":["MetaCyc:1PFRUCTPHOSN-RXN","RHEA:14213"],"synonyms":[{"name":"1-phosphofructokinase (phosphorylating)","type":"related"},{"name":"ATP:D-fructose-phosphate 6-phosphotransferase activity","type":"related"},{"name":"D-fructose-1-phosphate kinase activity","type":"related"},{"name":"fructose 1-phosphate kinase activity","type":"related"},{"name":"fructose-1-phosphate kinase activity","type":"related"},{"name":"phosphofructokinase 1","type":"related"}],"termid":"GO:0008662"}


id: PBO:0062920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidinergic receptor P2Y6","termid":"PBO:0062920"}


id: PBO:0004998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA biogenesis protein (predicted)","termid":"PBO:0004998"}


id: PBO:0078084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPPC2L pseudogene 1","termid":"PBO:0078084"}


id: GO:0102385
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = seychellene + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete patchoulol synthase activity (obsolete GO:0102385)","termid":"GO:0102385"}


id: PBO:0054950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2364","termid":"PBO:0054950"}


id: PBO:0040268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atlastin GTPase 3","termid":"PBO:0040268"}


id: PBO:0083101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA end-binding protein required for nonhomologous end joining (NHEJ); subunit of the DNA ligase IV complex involved in initial end binding, intermolecular ligation, and DNA ligase reactivation after completion of repair; phosphorylation by Tpk1p is required for DNA damage induced NHEJ and for nuclear targeting of Nej1p and Lif1p; human homolog NHEJ1 is phosphorylated by human Tpk1p homolog PRKACB, regulating NHEJ; transcriptionally repressed by MAT heterozygosity","termid":"PBO:0083101"}


id: GO:0034935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dichlorotoluene + NADH + H+ + O2 = 4,6-dichloro-3-methyl-cis-1,2-dihydroxycyclohexa-3,5-diene + NAD+.","definition_xrefs":["UM-BBD_reactionID:r0957"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrachlorobenzene dioxygenase activity (obsolete GO:0034935)","termid":"GO:0034935"}


id: PBO:0083947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of C-terminal domain kinase I; CTDK-I phosphorylates RNA polymerase II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and also phosphorylates ribosomal protein Rps2p to increase translational fidelity; protein abundance increases in response to DNA replication stress","termid":"PBO:0083947"}


id: PBO:0061249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2 pseudogene 1","termid":"PBO:0061249"}


id: FYPO:0005619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of sumoylated protein measured in the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of sumoylated protein in cell","synonyms":[{"name":"increased accumulation of sumoylated protein in cell","type":"related"},{"name":"increased level of sumoylated protein in cell during mitotic cell cycle","type":"related"},{"name":"increased level of sumoylated protein in cell during vegetative growth","type":"exact"},{"name":"increased sumoylated protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0005619"}


id: PBO:0111057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase superfamily, implicated in transcription , RNA processing, or RNA export","termid":"PBO:0111057"}


id: GO:0034393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of smooth muscle cell apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of muscle cell apoptotic process","termid":"GO:0010661"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell apoptotic process","termid":"GO:0034391"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell apoptotic process","termid":"GO:0034390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell apoptotic process","synonyms":[{"name":"activation of smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of SMC apoptosis","type":"exact"},{"name":"positive regulation of smooth muscle cell apoptosis","type":"narrow"},{"name":"stimulation of smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"up-regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"upregulation of smooth muscle cell apoptosis","type":"exact"}],"termid":"GO:0034393"}


id: PBO:0026905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_H4-K20_dimethylation","termid":"PBO:0026905"}


id: PBO:0070818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 48","termid":"PBO:0070818"}


id: PBO:0070668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 39","termid":"PBO:0070668"}


id: GO:1905451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Fc-gamma receptor signaling pathway involved in phagocytosis.","definition_xrefs":["PMID:18832707","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"positive regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060369"},{"relation_name":"is_a","term_name":"regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:1905449"},{"relation_name":"positively_regulates","term_name":"Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:0038096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"activation of Fc gamma receptor-dependent phagocytosis","type":"narrow"},{"name":"activation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"narrow"},{"name":"activation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"narrow"},{"name":"activation of Fcgamma receptor-mediated phagocytosis","type":"narrow"},{"name":"activation of IgG-mediated phagocytosis","type":"narrow"},{"name":"positive regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"positive regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"positive regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"positive regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"up regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"up regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"up regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"up regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"up regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"up-regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"up-regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"up-regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"up-regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"up-regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"upregulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"upregulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"upregulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"upregulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"upregulation of IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:1905451"}


id: MONDO:0013604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myopia (disease) in which the cause of the disease is a mutation in the ZNF644 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 21, autosomal dominant","secondary_identifiers":["UMLS:C3279997","MEDGEN:481627","OMIM:614167"],"synonyms":[{"name":"MYP21","type":"related"},{"name":"ZNF644 myopia (disease)","type":"exact"},{"name":"myopia (disease) caused by mutation in ZNF644","type":"exact"},{"name":"myopia 21, autosomal dominant","type":"exact"}],"termid":"MONDO:0013604","xrefs":{"Monarch":{"xref_id":"0013604"}}}


id: GO:1904105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in gastrulation.","definition_xrefs":["GOC:TermGenie","PMID:24892953","GO_REF:0000058","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in gastrulation","synonyms":[{"name":"activation of convergent extension involved in gastrulation","type":"narrow"},{"name":"up regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"up-regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"upregulation of convergent extension involved in gastrulation","type":"exact"}],"termid":"GO:1904105"}


id: PBO:0003598
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.5","termid":"PBO:0003598"}


id: PBO:0003072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-1,6-bisphosphatase Fbp1","termid":"PBO:0003072"}


id: FYPO:0003613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is normal (i.e. indistinguishable from wild type) during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic sister chromatid cohesion","termid":"FYPO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion during meiotic prophase I","synonyms":[{"name":"normal sister chromatid cohesion during meiotic prophase I","type":"exact"}],"termid":"FYPO:0003613"}


id: PBO:0004774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre1 cleavage activating protein, Scap Scp1","termid":"PBO:0004774"}


id: MONDO:0003280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital locomotor ataxia of lambs, thought to be associated with copper deficiency. It is characterized clinically by progressive incoordination of the hind limbs and pathologically by disruption of neuron and myelin development in the central nervous system. It is caused by a deficiency of metabolizable copper in the ewe during the last half of her pregnancy. (Dorland, 28th ed; Stedman, 26th ed)","definition_xrefs":["MESH:D013540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"nutritional deficiency disease, non-human animal","termid":"MONDO:0700103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swayback","secondary_identifiers":["SCTID:61960001","DOID:5112"],"synonyms":[{"name":"swayback of sheep","type":"exact"}],"termid":"MONDO:0003280","xrefs":{"Monarch":{"xref_id":"0003280"}}}


id: GO:0008787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-allose = ADP + D-allose 6-phosphate.","definition_xrefs":["EC:2.7.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexokinase activity","termid":"GO:0004396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"D-allose kinase activity","secondary_identifiers":["MetaCyc:ALLOSE-KINASE-RXN","RHEA:14805"],"synonyms":[{"name":"ATP:D-allose 6-phosphotransferase activity","type":"related"},{"name":"D-allokinase activity","type":"related"},{"name":"D-allose-6-kinase activity","type":"related"},{"name":"allokinase (phosphorylating)","type":"related"},{"name":"allokinase activity","type":"related"},{"name":"allose kinase activity","type":"narrow"}],"termid":"GO:0008787"}


id: PBO:0113372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with structural similarity to lipid transport protein Vps13p; localizes to multiple membrane contact sites between organelles; role in phospholipid homeostasis and lipidomic adaptation to cold; required for fermentation at low temperature; plays a role in phosphatidylethanolamine metabolism and secretory protein maturation; non-tagged protein is detected in highly purified mitochondria in HTP studies","termid":"PBO:0113372"}


id: PBO:0091510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide exchange factor for the ER lumenal Hsp70 chaperone, Sil1","termid":"PBO:0091510"}


id: MONDO:0014348
data:
  {"annotated_genes":["SJAG_01570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86170],"is_not":false,"summary":null,"term":"MONDO:0014348"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the PGAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 42","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22564","MEDGEN:862780","UMLS:C4014343","OMIM:615802"],"synonyms":[{"name":"MRT42","type":"related"},{"name":"PGAP1 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in PGAP1","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 9","type":"related"},{"name":"intellectual disability, autosomal recessive 42","type":"exact"},{"name":"intellectual disability, autosomal recessive type 42","type":"exact"},{"name":"mental retardation, autosomal recessive 42","type":"related"},{"name":"mental retardation, autosomal recessive type 42","type":"exact"},{"name":"neurodevelopmental disorder with dysmorphic features, spasticity, and brain abnormalities","type":"exact"}],"termid":"MONDO:0014348","terms_by_termid":{"MONDO:0014348":null},"xrefs":{"Monarch":{"xref_id":"0014348"}}}


id: GO:0110154
data:
  {"annotated_genes":["SJAG_05694","SJAG_05010","SJAG_01625","SJAG_02213","SJAG_03023","SJAG_02370","SJAG_03157","SJAG_04880","SJAG_01746","SJAG_04640","SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74140,79492,75618,58511,111749,77221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000290"},{"annotations":[75744,78770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031087"},{"annotations":[91090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110156"},{"annotations":[72828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110155"},{"annotations":[91434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of an RNA.","definition_xrefs":["GOC:sp","PMID:25533955","PMID:31101919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01625":null,"SJAG_01746":null,"SJAG_02213":null,"SJAG_02370":null,"SJAG_02374":null,"SJAG_03023":null,"SJAG_03157":null,"SJAG_04640":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA decapping","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0110154","terms_by_termid":{"GO:0000290":null,"GO:0031087":null,"GO:0036450":null,"GO:0110155":null,"GO:0110156":null}}


id: PBO:0011516
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbinds SPAC11H11.04 with force 120 pN at probe speed 1.74 um/s","termid":"PBO:0011516"}


id: MONDO:0015019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An an autoinflammatory disease characterized by periodic fever, dermatitis, arthritis, and swelling of the distal extremities, as well as gastrointestinal and sicca-like symptoms. The disorder is associated with specific NOD2 variants.","definition_xrefs":["OMIM:617321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yao syndrome","secondary_identifiers":["SCTID:768667002","UMLS:C4310620","MEDGEN:934587"],"synonyms":[{"name":"YAOS","type":"exact"},{"name":"Yao syndrome","type":"exact"}],"termid":"MONDO:0015019","xrefs":{"Monarch":{"xref_id":"0015019"}}}


id: MONDO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete patent foramen ovale (obsolete MONDO:0001759)","termid":"MONDO:0001759","xrefs":{"Monarch":{"xref_id":"0001759"}}}


id: GO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Specific behavior of a newborn or infant mammal that results in the derivation of nourishment from the breast.","definition_xrefs":["GOC:pr","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suckling behavior","synonyms":[{"name":"nursing behavior","type":"exact"}],"termid":"GO:0001967"}


id: PBO:0065632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 1","termid":"PBO:0065632"}


id: PBO:0074162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F5","termid":"PBO:0074162"}


id: FYPO:0007901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal.","definition_xrefs":["PMID:29622660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased number of R-loops","synonyms":[{"name":"increased level of R-loops","type":"exact"},{"name":"increased level of RNA-DNA hybrids","type":"exact"}],"termid":"FYPO:0007901"}


id: FYPO:0005692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from one or more microtubule organizing centers (MTOCs) is abnormal.","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"},{"relation_name":"is_a","term_name":"abnormal microtubule nucleation","termid":"FYPO:0007484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal microtubule nucleation during vegetative growth","synonyms":[{"name":"abnormal microtubule nucleation during mitotic cell cycle","type":"related"},{"name":"microtubule nucleation defects during vegetative growth","type":"exact"}],"termid":"FYPO:0005692"}


id: PBO:0016108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASP family protein involved in Golgi vesicle transport Coy1 (predicted)","termid":"PBO:0016108"}


id: PR:Q9P5N0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abc3 gene.","definition_xrefs":["UniProtKB:Q9P5N0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette transporter abc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.05","synonyms":[{"name":"Spom972h-abc3","type":"exact"}],"termid":"PR:Q9P5N0"}


id: PBO:0066902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 203","termid":"PBO:0066902"}


id: GO:0080073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a coumaroyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"spermidine:coumaroyl CoA N-acyltransferase activity","termid":"GO:0080073"}


id: PBO:0088858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga7","termid":"PBO:0088858"}


id: MONDO:0013952
data:
  {"annotated_genes":["SJAG_00891"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87010],"is_not":false,"summary":null,"term":"MONDO:0013952"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX14 defect","termid":"MONDO:0100268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00891":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0005244","MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 13A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:766918","DOID:0080487","MESH:C566624","OMIM:614887","UMLS:C3554004","GARD:15877"],"synonyms":[{"name":"PBD13A","type":"related"},{"name":"peroxisome biogenesis disorder 13A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group K","type":"related"}],"termid":"MONDO:0013952","terms_by_termid":{"MONDO:0013952":null},"xrefs":{"Monarch":{"xref_id":"0013952"}}}


id: PBO:0004745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Grn1","termid":"PBO:0004745"}


id: PR:Q09150
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 61 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.02","secondary_identifiers":["UniProtKB:Q09150"],"synonyms":[{"name":"Spom972h-WDR61","type":"exact"}],"termid":"PR:Q09150"}


id: GO:0005768
data:
  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id: MONDO:0011647
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with variation in the region 10p13.","definition_xrefs":["DOID:0110039","PMID:11443525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"Alzheimer disease 7","secondary_identifiers":["OMIM:606187","UMLS:C1853555","MEDGEN:342907","GARD:16510","MESH:C565251"],"synonyms":[{"name":"AD7","type":"exact"},{"name":"Ad7","type":"related"},{"name":"Alzheimer disease 7","type":"exact"},{"name":"Alzheimer disease type 7","type":"exact"},{"name":"Alzheimer disease, familial 7","type":"exact"},{"name":"Alzheimer disease, familial, 7","type":"related"},{"name":"Alzheimer disease-7","type":"exact"},{"name":"Alzheimer's disease 7","type":"exact"},{"name":"Alzheimer's disease type 7","type":"exact"}],"termid":"MONDO:0011647","xrefs":{"Monarch":{"xref_id":"0011647"}}}


id: MOD:01705
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen with an isotope tagged reagent acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}


id: MONDO:0009181
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS) characterized by generalized blistering associated with muscular dystrophy.","definition_xrefs":["Orphanet:257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of plectin","termid":"MONDO:0016198"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336","MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 5B, with muscular dystrophy","secondary_identifiers":["OMIM:226670","UMLS:C2931072","GARD:2137","MESH:C535955","SCTID:723308003","MEDGEN:418981","DOID:0090017","NANDO:2201376"],"synonyms":[{"name":"EBS-MD","type":"exact"},{"name":"EBSMD","type":"related"},{"name":"Epidermolysa bullosa simplex and limb girdle muscular dystrophy","type":"related"},{"name":"Epidermolysa bullosa simplex with muscular dystrophy","type":"related"},{"name":"MD-EBS","type":"related"},{"name":"MDEBS","type":"related"},{"name":"epidermolysis bullosa simplex - limb girdle muscular dystrophy","type":"related"},{"name":"epidermolysis bullosa simplex 5B, with muscular dystrophy","type":"exact"},{"name":"epidermolysis bullosa simplex and limb-girdle muscular dystrophy","type":"exact"},{"name":"epidermolysis bullosa simplex with muscular dystrophy","type":"exact"},{"name":"limb-girdle muscular dystrophy with epidermolysis bullosa simplex","type":"exact"}],"termid":"MONDO:0009181","xrefs":{"Monarch":{"xref_id":"0009181"}}}


id: PBO:0053246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX1 divergent transcript","termid":"PBO:0053246"}


id: MONDO:0015097
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital aortic valve stenosis","termid":"MONDO:0017735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve dysplasia","secondary_identifiers":["Orphanet:101043","GARD:19776","MEDGEN:576679","UMLS:C0344993","SCTID:253604004","ICD9:746.89"],"termid":"MONDO:0015097","xrefs":{"Monarch":{"xref_id":"0015097"}}}


id: GO:0097388
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 19 (CCL19) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 19 production","synonyms":[{"name":"CCL19 production","type":"exact"},{"name":"EBI1 ligand chemokine production","type":"exact"},{"name":"ELC production","type":"exact"},{"name":"MIP-3-beta production","type":"exact"},{"name":"macrophage inflammatory protein-3-beta production","type":"exact"}],"termid":"GO:0097388"}


id: FYPO:0000630
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which biofilm formation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal biofilm formation","termid":"FYPO:0000630"}


id: PR:P37202
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex exonuclease RRP44 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03932","PANTHER:PTHR23355:SF13","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex exonuclease dis3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.10","secondary_identifiers":["UniProtKB:P37202"],"synonyms":[{"name":"Spom972h-DIS3","type":"exact"},{"name":"chromosome disjunction protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mitotic control protein dis3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribosomal RNA-processing protein 44 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P37202"}


id: GO:0048743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:dph","GOC:lm","GOC:mtg_muscle","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber development","termid":"GO:0048742"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"positively_regulates","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle fiber development","synonyms":[{"name":"activation of skeletal muscle fiber development","type":"narrow"},{"name":"positive regulation of skeletal muscle fibre development","type":"exact"},{"name":"positive regulation of skeletal myofiber development","type":"exact"},{"name":"positive regulation of skeletal myofibre development","type":"exact"},{"name":"stimulation of skeletal muscle fiber development","type":"narrow"},{"name":"up regulation of skeletal muscle fiber development","type":"exact"},{"name":"up-regulation of skeletal muscle fiber development","type":"exact"},{"name":"upregulation of skeletal muscle fiber development","type":"exact"}],"termid":"GO:0048743"}


id: MONDO:0014121
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant childhood-onset proximal spinal muscular atrophy","termid":"MONDO:0018190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"autosomal dominant childhood-onset proximal spinal muscular atrophy with contractures","secondary_identifiers":["DOID:0070349","UMLS:C4747715","GARD:13222","OMIM:615290","Orphanet:363454","MEDGEN:1669929"],"synonyms":[{"name":"Lower extremity-predominant autosomal dominant proximal spinal muscular atrophy with contractures","type":"exact"},{"name":"SMALED2","type":"exact"},{"name":"autosomal dominant spinal muscular atrophy, lower extremity-predominant 2","type":"related"},{"name":"spinal muscular atrophy, LOWER extremity-predominant, 2, autosomal dominant","type":"related"},{"name":"spinal muscular atrophy, lower extremity-predominant 2, autosomal dominant","type":"related"},{"name":"spinal muscular atrophy, lower extremity-predominant, 2A, autosomal dominant","type":"exact"}],"termid":"MONDO:0014121","xrefs":{"Monarch":{"xref_id":"0014121"}}}


id: MONDO:0010704
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mildest form of otopalatodigital syndrome spectrum disorder that is characterized by a generalized skeletal dysplasia, mild intellectual disability, conductive hearing loss, and typical facial anomalies.","definition_xrefs":["Orphanet:90650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"otopalatodigital syndrome","termid":"MONDO:0019027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome type 1","secondary_identifiers":["GARD:5121","icd11.foundation:1442049882","OMIM:311300","UMLS:C0265251","MEDGEN:78542","NCIT:C118845","SCTID:54036001","ICD9:759.89","DOID:0111783"],"synonyms":[{"name":"OPD 1 syndrome","type":"exact"},{"name":"OPD I syndrome","type":"exact"},{"name":"OPD syndrome","type":"related"},{"name":"OPD syndrome 1","type":"exact"},{"name":"OPD1","type":"exact"},{"name":"Taybi syndrome","type":"exact"},{"name":"frontootopalatodigital osteodysplasia","type":"related"},{"name":"oto-palato-digital syndrome type 1","type":"exact"},{"name":"otopalatodigital spectrum disorder","type":"related"},{"name":"otopalatodigital syndrome, type 1","type":"exact"},{"name":"otopalatodigital syndrome, type I","type":"exact"},{"name":"otopalatodigital syndrome, type I, X-linked dominant","type":"exact"}],"termid":"MONDO:0010704","xrefs":{"Monarch":{"xref_id":"0010704"}}}


id: PBO:0066766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 64","termid":"PBO:0066766"}


id: MONDO:0006585
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skin findings arising from repeated rubbing, picking or scratching of a real or imagined irritation of the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"neurodermatitis","secondary_identifiers":["NCIT:C111963","UMLS:C0027822","DOID:3309","SCTID:267854005","EFO:1000740","MESH:D009450","MEDGEN:45056"],"synonyms":[{"name":"lichen simplex Chronicus","type":"exact"}],"termid":"MONDO:0006585","xrefs":{"Monarch":{"xref_id":"0006585"}}}


id: PBO:0007498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seipin homolog","termid":"PBO:0007498"}


id: PBO:0060540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuron navigator 2","termid":"PBO:0060540"}


id: GO:0010718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"}


id: GO:0019537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vibriobactin, the major siderophore produced by Vibrio cholerae.","definition_xrefs":["PMID:11112537","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vibriobactin metabolic process","termid":"GO:0019536"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"vibriobactin biosynthetic process","secondary_identifiers":["GO:0031196","GO:0031195"],"synonyms":[{"name":"vibriobactin anabolism","type":"exact"},{"name":"vibriobactin biosynthesis","type":"exact"},{"name":"vibriobactin biosynthetic process, peptide formation","type":"narrow"},{"name":"vibriobactin biosynthetic process, peptide modification","type":"narrow"},{"name":"vibriobactin formation","type":"exact"},{"name":"vibriobactin synthesis","type":"exact"}],"termid":"GO:0019537"}


id: FYPO:0004767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-alanine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar alanine level","synonyms":[{"name":"increased level of alanine in vacuole","type":"exact"},{"name":"increased vacuolar L-alanine level","type":"exact"},{"name":"increased vacuolar alanine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar alanine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004767"}


id: GO:0050599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + O2 + penicillin N = CO2 + deacetoxycephalosporin C + H2O + succinate.","definition_xrefs":["RHEA:20748","EC:1.14.20.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated","termid":"GO:0050498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deacetoxycephalosporin-C synthase activity","secondary_identifiers":["MetaCyc:1.14.20.1-RXN","GO:0045441","KEGG_REACTION:R05301"],"synonyms":[{"name":"DAOC synthase activity","type":"related"},{"name":"DAOCS activity","type":"related"},{"name":"deacetoxycephalosporin C synthetase activity","type":"exact"},{"name":"expandase activity","type":"exact"},{"name":"penicillin N expandase activity","type":"related"},{"name":"penicillin-N,2-oxoglutarate:oxygen oxidoreductase (ring-expanding)","type":"related"}],"termid":"GO:0050599"}


id: GO:0016032
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65510],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0075523"}]},"cv_name":"biological_process","definition":"A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.","definition_xrefs":["GOC:jl","GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral process","references_by_uniquename":{"GO_REF:0000043":null},"secondary_identifiers":["Reactome:R-HSA-162906","GO:0022415","Wikipedia:Viral_life_cycle"],"synonyms":[{"name":"viral infection","type":"related"},{"name":"virulence","type":"related"},{"name":"virus process","type":"exact"}],"termid":"GO:0016032","terms_by_termid":{"GO:0075523":null}}


id: GO:0033026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of mast cell apoptotic process","termid":"GO:0033025"},{"relation_name":"is_a","term_name":"negative regulation of myeloid cell apoptotic process","termid":"GO:0033033"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte apoptotic process","termid":"GO:2000107"},{"relation_name":"negatively_regulates","term_name":"mast cell apoptotic process","termid":"GO:0033024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell apoptotic process","synonyms":[{"name":"down regulation of mast cell apoptosis","type":"exact"},{"name":"down-regulation of mast cell apoptosis","type":"exact"},{"name":"downregulation of mast cell apoptosis","type":"exact"},{"name":"inhibition of mast cell apoptosis","type":"narrow"},{"name":"negative regulation of mast cell apoptosis","type":"narrow"}],"termid":"GO:0033026"}


id: PBO:0027391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_disulfide_oxidoreductase_activity","termid":"PBO:0027391"}


id: PBO:0017916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide pyrophosphatase Npp1 (predicted)","termid":"PBO:0017916"}


id: MONDO:0008735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial glucocorticoid deficiency","termid":"MONDO:0008733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenocortical unresponsiveness to ACTH with postreceptor defect","secondary_identifiers":["UMLS:C1859971","MESH:C565971","OMIM:202355","MEDGEN:348507","GARD:15133"],"synonyms":[{"name":"adrenocortical unresponsiveness to ACTH with postreceptor defect","type":"exact"},{"name":"familial glucocorticoid deficiency due to defect distal to ACTH receptor","type":"related"}],"termid":"MONDO:0008735","xrefs":{"Monarch":{"xref_id":"0008735"}}}


id: PBO:0081837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 772","termid":"PBO:0081837"}


id: PBO:0039178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 8 pseudogene 1","termid":"PBO:0039178"}


id: PBO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis, specifically","termid":"PBO:0004909"}


id: GO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature T cell resulting from exposure to an antigen for which its T cell receptor is specific bound to an MHC molecule on an antigen presenting cell, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:0002291"}


id: PBO:0084277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein localized to mitochondria; required for sporulation and maintaining sphingolipid content; similar to SUR7; FMP45 has a paralog, YNL194C, that arose from the whole genome duplication","termid":"PBO:0084277"}


id: GO:0052135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in host (obsolete GO:0052135)","synonyms":[{"name":"negative aerotaxis within host","type":"exact"}],"termid":"GO:0052135"}


id: GO:0140015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H3 acetylated at lysine 14.","definition_xrefs":["PMID:30110338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 reader activity","termid":"GO:0140006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140566","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"histone H3K14ac reader activity","synonyms":[{"name":"H3K14ac modified histone binding","type":"narrow"}],"termid":"GO:0140015"}


id: GO:0052005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"symbiont-mediated modulation of host ethylene-mediated defense response","termid":"GO:0052084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host ethylene-mediated defense response","secondary_identifiers":["GO:0052268","GO:0052070","GO:0052254"],"synonyms":[{"name":"down regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"down-regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"downregulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"inhibition by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"negative regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway","type":"broad"},{"name":"negative regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"suppression by organism of host ethylene-mediated defense response","type":"exact"},{"name":"suppression by symbiont of host ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052005"}


id: MONDO:0007410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated cryptophtalmia is a congenital abnormality in which the eyelids are absent and skin covers the ocular bulb, which is often microphthalmic. Six cases of complete bilateral crytophthalmia have been described. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:91396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"cryptophthalmia","termid":"MONDO:0020153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated cryptophthalmia","secondary_identifiers":["MESH:C565138","OMIM:123570","SCTID:718691008","GARD:16797","MEDGEN:342242","UMLS:C1852453","DOID:0111717"],"synonyms":[{"name":"ankyloblepharon, simple","type":"related"},{"name":"cryptophthalmos with microphthalmia and Peters anomaly","type":"related"},{"name":"cryptophthalmos, unilateral or bilateral, isolated","type":"related"},{"name":"nonsyndromic cryptophthalmia","type":"exact"}],"termid":"MONDO:0007410","xrefs":{"Monarch":{"xref_id":"0007410"}}}


id: PBO:0085454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Posttranscriptional regulator of phosphate and glucose metabolism; facilitates PHO4 mRNA degradation by interacting with Pop2p; regulates PHO4 mRNA stability by binding to PHO4's 3'UTR in a phosphate-dependent manner; contains highly conserved YTH (YT521-B Homology) domain that exhibits RNA-binding activity; human homolog YTHDF2 can complement yeast null mutant","termid":"PBO:0085454"}


id: PBO:0085499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein anchored to mitochondrial inner membrane; may have a redundant function with Sco1p in delivery of copper to cytochrome c oxidase; interacts with Cox2p; SCO2 has a paralog, SCO1, that arose from the whole genome duplication","termid":"PBO:0085499"}


id: PBO:0064734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 70","termid":"PBO:0064734"}


id: MOD:00370
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to (E)-2,3-didehydrotyrosine.","definition_xrefs":["RESID:AA0365","PubMed:12623015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated tyrosine","termid":"MOD:00706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(E)-2,3-didehydrotyrosine","synonyms":[{"name":"(2E)-2-amino-3-(4-hydroxyphenyl)prop-2-enoic acid","type":"exact"},{"name":"(E)-2,3-didehydrogenated tyrosine","type":"exact"},{"name":"(E)-2,3-didehydrotyrosine","type":"exact"},{"name":"2-amino-3-oxo-butanoic_acid","type":"related"},{"name":"Didehydro","type":"related"},{"name":"E-dHTyr","type":"exact"},{"name":"MOD_RES (E)-2,3-didehydrotyrosine","type":"exact"},{"name":"amino-(para-hydroxybenzylidenyl)acetic acid","type":"exact"},{"name":"blue non-fluorescent pocilloporin chromophore","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"},{"name":"trans-dehydrotyrosine","type":"exact"}],"termid":"MOD:00370"}


id: GO:0036236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of an substrate by the conjugation of glucuronic acid to form an acyl-glucuronide (also called an acyl-glucuronoside).","definition_xrefs":["GOC:BHF","GOC:vk","PMID:12485951","PMID:22294686"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl glucuronidation (obsolete GO:0036236)","termid":"GO:0036236"}


id: PATO:0001165
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001165 urine enzyme composition value (obsolete PATO:0001165)","termid":"PATO:0001165"}


id: GO:0043287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a poly(3-hydroxyalkanoate), a polyester of 3-hydroxyacids produced as intracellular granules by a large variety of bacteria.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"poly(3-hydroxyalkanoate) binding","synonyms":[{"name":"PHA binding","type":"exact"}],"termid":"GO:0043287"}


id: PBO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal tubular acidosis","termid":"PBO:0002089"}


id: GO:0061356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of a Wnt protein from a cell.","definition_xrefs":["PMID:19223472","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"Wnt protein secretion","termid":"GO:0061355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of Wnt protein secretion","termid":"GO:0061356"}


id: PBO:0055533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2968","termid":"PBO:0055533"}


id: PBO:0075159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 15","termid":"PBO:0075159"}


id: GO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-15","termid":"GO:0070672"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-15","synonyms":[{"name":"cellular response to IL-15","type":"exact"}],"termid":"GO:0071350"}


id: PBO:0044992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diablo IAP-binding mitochondrial protein","termid":"PBO:0044992"}


id: SO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that rescues.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"rescue","termid":"SO:0000814"},{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue_region","synonyms":[{"name":"rescue fragment","type":"exact"},{"name":"rescue region","type":"exact"},{"name":"rescue segment","type":"related"}],"termid":"SO:0000411"}


id: FYECO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which vanoxerine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ vanoxerine","termid":"FYECO:0000347"}


id: GO:0034054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont stops, prevents, or reduces the frequency, rate or extent of defense-related programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host defense-related programmed cell death (obsolete GO:0034054)","secondary_identifiers":["Reactome:R-HSA-9636569"],"synonyms":[{"name":"down regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"down-regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"downregulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"inhibition by symbiont of host defense-related PCD","type":"narrow"},{"name":"inhibition by symbiont of host defense-related programmed cell death","type":"narrow"},{"name":"inhibition of HR","type":"narrow"},{"name":"inhibition of host defense-related PCD","type":"narrow"},{"name":"inhibition of hypersensitive response","type":"narrow"},{"name":"negative regulation by symbiont of host defense-related PCD","type":"exact"},{"name":"negative regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of plant HR","type":"narrow"},{"name":"negative regulation by symbiont of plant hypersensitive response","type":"narrow"},{"name":"suppression by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"suppression of HR","type":"narrow"}],"termid":"GO:0034054"}


id: PBO:0005364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ucp12 (predicted)","termid":"PBO:0005364"}


id: GO:0034999
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An oligosaccharyltransferase (OST) complex that contains the seven polypeptides found in OST complex I, plus heterotrimeric Sec61alpha-beta-gamma. Of the three forms of mammalian OST complexes identified, the OSTII complex has intermediate affinity for ribosomes.","definition_xrefs":["GOC:BHF","PMID:15835887"],"gene_count":0,"genotype_count":0,"name":"obsolete oligosaccharyltransferase II complex (obsolete GO:0034999)","synonyms":[{"name":"OSTCII","type":"exact"}],"termid":"GO:0034999"}


id: MONDO:0007283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYBA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 42","secondary_identifiers":["OMIM:115900","UMLS:C4011454","MEDGEN:859891","DOID:0110237"],"synonyms":[{"name":"A cataract that has_material_basis_in heterozygous mutation in the CRYBA2 gene on chromosome 2q35.","type":"exact"},{"name":"CRYBA2 early-onset non-syndromic cataract","type":"exact"},{"name":"CTRCT42","type":"exact"},{"name":"cataract 42","type":"exact"},{"name":"cataract type 42","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYBA2","type":"exact"}],"termid":"MONDO:0007283","xrefs":{"Monarch":{"xref_id":"0007283"}}}


id: PBO:0015218
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SEC14","termid":"PBO:0015218"}


id: PBO:0053754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 994","termid":"PBO:0053754"}


id: PBO:0030778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mercaptoethanol","termid":"PBO:0030778"}


id: PBO:0039899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 3","termid":"PBO:0039899"}


id: PBO:0016979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Adg1","termid":"PBO:0016979"}


id: PBO:0078077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAM2 antisense RNA 1 (head to head)","termid":"PBO:0078077"}


id: FYPO:0003005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that has a larger diameter and volume than normal and forms branches, and does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with branched, elongated germ tube","termid":"FYPO:0002515"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with swollen elongated germ tube","termid":"FYPO:0002911"},{"relation_name":"is_a","term_name":"inviable branched, swollen, elongated vegetative cell","termid":"FYPO:0004494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with swollen, branched, elongated germ tube","synonyms":[{"name":"inviable after spore germination with elongated swollen branched germ tube","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen, branched, elongated cell","type":"exact"},{"name":"inviable following spore germination with swollen, branched, elongated germ tube","type":"exact"},{"name":"inviable germinated spore with swollen, branched, elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with swollen, branched, elongated germ tube","type":"exact"}],"termid":"FYPO:0003005"}


id: GO:1903163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any sodium ion transmembrane transporter activity that is involved in sodium ion import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GOC:TermGenie","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium ion transmembrane transporter activity involved in sodium ion import into cell (obsolete GO:1903163)","synonyms":[{"name":"sodium ion transmembrane transporter activity involved in sodium ion import into cell","type":"exact"},{"name":"sodium transporter activity involved in sodium ion import into cell","type":"exact"}],"termid":"GO:1903163"}


id: PBO:0085916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of a flavodoxin-like fold protein family that includes Pst2p and Ycp4p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; RFS1 has a paralog, PST2, that arose from the whole genome duplication","termid":"PBO:0085916"}


id: PBO:0048372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAR1 divergent transcript","termid":"PBO:0048372"}


id: PBO:0051459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 8-61","termid":"PBO:0051459"}


id: MONDO:0024569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy plus syndrome","termid":"MONDO:0014720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"optic atrophy 8","secondary_identifiers":["OMIM:616648","GARD:16148","UMLS:C4085249","MEDGEN:898923","DOID:0111439"],"synonyms":[{"name":"OPA8","type":"exact"},{"name":"optic atrophy 8","type":"exact"}],"termid":"MONDO:0024569","xrefs":{"Monarch":{"xref_id":"0024569"}}}


id: MONDO:0016960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of chromosome 9","termid":"MONDO:0016930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy of the long arm of chromosome 9","secondary_identifiers":["Orphanet:262905","GARD:20880","UMLS:C5679702","MEDGEN:1826034"],"synonyms":[{"name":"partial duplication of chromosome 9q","type":"exact"},{"name":"partial duplication of the long arm of chromosome 9","type":"exact"},{"name":"partial trisomy of chromosome 9q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome type 9","type":"exact"}],"termid":"MONDO:0016960","xrefs":{"Monarch":{"xref_id":"0016960"}}}


id: GO:1902872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of horizontal cell localization.","definition_xrefs":["GOC:mr","PMID:16872597","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"horizontal cell localization","termid":"GO:0035852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of horizontal cell localization","synonyms":[{"name":"regulation of horizontal cell localisation","type":"exact"},{"name":"regulation of horizontal cell positioning","type":"exact"},{"name":"regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"regulation of retinal horizontal cell positioning","type":"exact"}],"termid":"GO:1902872"}


id: PBO:0084062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of the SEA complex, a coatomer-related complex that associates dynamically with the vacuole; Iml1p functions in the SEACIT complex as a GAP for the Rag family GTPase Gtr1p (EGOC subunit), resulting in the inhibition of TORC1 signaling in response to amino acid deprivation; the Iml1p/SEACIT complex is required for non-nitrogen-starvation (NNS)-induced autophagy","termid":"PBO:0084062"}


id: PBO:0061098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroligin 2","termid":"PBO:0061098"}


id: GO:0042896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of chloramphenicol, a broad-spectrum antibiotic that inhibits bacterial protein synthesis, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chloramphenicol transmembrane transporter activity","synonyms":[{"name":"chloramphenicol transporter activity","type":"related"}],"termid":"GO:0042896"}


id: GO:0051922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + cholesterol = adenosine 3',5'-bisphosphate + cholesterol sulfate + H+.","definition_xrefs":["PMID:11416019","RHEA:52368","PMID:12145317","PMID:12730293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol sulfotransferase activity","termid":"GO:0004027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"cholesterol sulfotransferase activity","termid":"GO:0051922"}


id: GO:0009524
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The phragmoplast is a plant cell specific cytoplasmic structure composed of cytoskeletal polymers, membranes, and associated cytosolic proteins that functions as the focused secretory module for assembling the cell plate.","definition_xrefs":["PMID:28943203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phragmoplast","secondary_identifiers":["Wikipedia:Phragmoplast"],"termid":"GO:0009524"}


id: PBO:0075869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 9","termid":"PBO:0075869"}


id: GO:0033549
data:
  {"annotated_genes":["SJAG_03185","SJAG_03263","SJAG_02000","SJAG_02013","SJAG_03893","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97384],"is_not":false,"summary":null,"term":"GO:0033549"},{"annotations":[116822,95730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990439"},{"annotations":[91427,94795,70802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033550"},{"annotations":[70807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017017"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate.","definition_xrefs":["PMID:17208316","GOC:mah","PMID:12184814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02000":null,"SJAG_02013":null,"SJAG_02433":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03893":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0140096","GO:0016788","GO:0003824","GO:0016787","GO:0003674","GO:0004721"],"is_obsolete":false,"name":"MAP kinase phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"MAPK phosphatase activity","type":"exact"}],"termid":"GO:0033549","terms_by_termid":{"GO:0017017":null,"GO:0033549":null,"GO:0033550":null,"GO:1990439":null}}


id: PBO:0064211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B domain containing 1","termid":"PBO:0064211"}


id: MONDO:0700075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital muscular dystrophy in which the cause of the disease is a variation in the POMGNT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"},{"relation_name":"is_a","term_name":"myopathy caused by variation in POMGNT2","termid":"MONDO:0700069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005336","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy caused by variation in POMGNT2","synonyms":[{"name":"congenital muscular dystrophy caused by mutation in POMGNT2","type":"exact"},{"name":"congenital muscular dystrophy-POMGNT2 related","type":"exact"}],"termid":"MONDO:0700075","xrefs":{"Monarch":{"xref_id":"0700075"}}}


id: PBO:0002774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vigtamin H transporter (predicted)","termid":"PBO:0002774"}


id: PBO:0057759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1972-2","termid":"PBO:0057759"}


id: MONDO:0030937
data:
  {"annotated_genes":["SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85359],"is_not":false,"summary":null,"term":"MONDO:0030937"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex II deficiency, nuclear type","termid":"MONDO:0031230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"mitochondrial complex 2 deficiency, nuclear type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436934","GARD:16430","OMIM:619167","MEDGEN:1751884"],"synonyms":[{"name":"MC2DN3","type":"exact"},{"name":"mitochondrial complex 2 deficiency, nuclear type 3","type":"exact"},{"name":"mitochondrial complex II deficiency, nuclear type 3","type":"exact"}],"termid":"MONDO:0030937","terms_by_termid":{"MONDO:0030937":null},"xrefs":{"Monarch":{"xref_id":"0030937"}}}


id: PBO:0069759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1042, pseudogene","termid":"PBO:0069759"}


id: MONDO:0007280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 1pter-p36.13.","definition_xrefs":["PMID:7607651","DOID:0110228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 8 multiple types","secondary_identifiers":["MEDGEN:396230","UMLS:C1861833","MESH:C538285","OMIM:115665","Orphanet:98983"],"synonyms":[{"name":"CTRCT8","type":"exact"},{"name":"cataract 8, multiple types","type":"related"},{"name":"cataract congenital Volkmann type","type":"related"},{"name":"cataract, congenital, Volkmann type","type":"exact"}],"termid":"MONDO:0007280","xrefs":{"Monarch":{"xref_id":"0007280"}}}


id: GO:2001020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of response to DNA damage stimulus.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of response to DNA damage stimulus (obsolete GO:2001020)","synonyms":[{"name":"regulation of DNA damage response","type":"exact"},{"name":"regulation of cellular DNA damage response","type":"exact"},{"name":"regulation of cellular response to DNA damage stimulus","type":"exact"},{"name":"regulation of response to genotoxic stress","type":"exact"}],"termid":"GO:2001020"}


id: FYPO:0001021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth during cellular response to osmotic stress","synonyms":[{"name":"normal cell population growth during cellular response to osmotic stress","type":"exact"},{"name":"normal cellular response to osmotic stress","type":"related"},{"name":"normal vegetative cell population growth during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0001021"}


id: PBO:0039579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1","termid":"PBO:0039579"}


id: GO:0009951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the establishment of polarity along the dorsal/ventral axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"dorsal/ventral axis specification","termid":"GO:0009950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polarity specification of dorsal/ventral axis","synonyms":[{"name":"polarity specification of dorsal-ventral axis","type":"exact"},{"name":"polarity specification of dorsoventral axis","type":"exact"}],"termid":"GO:0009951"}


id: PBO:0081049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 7","termid":"PBO:0081049"}


id: GO:0060543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"negatively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"negative regulation of strand invasion","synonyms":[{"name":"negative regulation of D-loop biosynthesis","type":"related"},{"name":"negative regulation of D-loop formation","type":"related"},{"name":"negative regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0060543"}


id: MONDO:0018298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic chronic skeletal disorder characterized by peripheral osteolysis (especially carpal and tarsal bones), interphalangeal joint erosions, subcutaneous fibrocollagenous nodules, facial dysmorphism, and a wide range of associated manifestations.","definition_xrefs":["Orphanet:371428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multicentric osteolysis-nodulosis-arthropathy spectrum","secondary_identifiers":["SCTID:716868003","UMLS:C1850155","GARD:17610","MEDGEN:342428"],"synonyms":[{"name":"MONA spectrum","type":"exact"}],"termid":"MONDO:0018298","xrefs":{"Monarch":{"xref_id":"0018298"}}}


id: PBO:0076993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 8","termid":"PBO:0076993"}


id: PBO:0072426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28","termid":"PBO:0072426"}


id: PBO:0049575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.W histone 3, pseudogene","termid":"PBO:0049575"}


id: MONDO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine adnexa cancer","secondary_identifiers":["DOID:11747","ICD9:183.9","MEDGEN:509333","ICD9:183","UMLS:C0153584"],"termid":"MONDO:0001351","xrefs":{"Monarch":{"xref_id":"0001351"}}}


id: GO:0046165
data:
  {"annotated_genes":["SJAG_01148","SJAG_03509","SJAG_03362","SJAG_02305","SJAG_00413","SJAG_02734","SJAG_02855","SJAG_03018","SJAG_04282","SJAG_02706","SJAG_04018","SJAG_00880","SJAG_04270","SJAG_02321","SJAG_02044","SJAG_04954","SJAG_03024","SJAG_01970","SJAG_02163","SJAG_00381","SJAG_03750","SJAG_03531","SJAG_04217","SJAG_02421","SJAG_02982","SJAG_03249","SJAG_02719","SJAG_03098","SJAG_03929","SJAG_00244","SJAG_02406","SJAG_04842","SJAG_03715","SJAG_00453","SJAG_00321","SJAG_02429","SJAG_00624","SJAG_02104","SJAG_04067","SJAG_00409","SJAG_02420","SJAG_00370","SJAG_01307","SJAG_00770","SJAG_03739","SJAG_04499","SJAG_01057","SJAG_03235","SJAG_03275","SJAG_00717","SJAG_03409","SJAG_04866","SJAG_04178","SJAG_00827","SJAG_03743","SJAG_00554","SJAG_03538","SJAG_01012","SJAG_03598","SJAG_04810","SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70940,71180,73650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[99768,71751,74235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[71520,107283,89418,76913,72917,79932,80151,76006,107596,109835,65653,76103,88234,94394,80016,71344,114975,70596,116285,73753,74031,108997,69634,75930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[93740,106258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[65727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"},{"annotations":[74538,114787,75548,93150,70993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[93645],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[109600],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[88797,113427],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[75359],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[105603,88324],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"},{"annotations":[96660,78689,105749,73517,76656,109463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[69673,108279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"},{"annotations":[73700,61509,76842,73804,69799,78223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[110198,99288,110197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"small molecule biosynthetic 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biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"alcohol anabolism","type":"exact"},{"name":"alcohol biosynthesis","type":"exact"},{"name":"alcohol formation","type":"exact"},{"name":"alcohol synthesis","type":"exact"}],"termid":"GO:0046165","terms_by_termid":{"GO:0000949":null,"GO:0006021":null,"GO:0006114":null,"GO:0006696":null,"GO:0006729":null,"GO:0009228":null,"GO:0010895":null,"GO:0019408":null,"GO:0032443":null,"GO:0032958":null,"GO:0036172":null,"GO:0045540":null,"GO:0046512":null,"GO:0070452":null,"GO:0090180":null}}


id: PBO:0039136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune regulator","termid":"PBO:0039136"}


id: PBO:0052169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 18","termid":"PBO:0052169"}


id: PBO:0055417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2847","termid":"PBO:0055417"}


id: PBO:0026676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_aluminium","termid":"PBO:0026676"}


id: PBO:0052342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 1C","termid":"PBO:0052342"}


id: GO:1900873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"pentadec-1-ene metabolic process","termid":"GO:1900872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentadec-1-ene biosynthetic process","synonyms":[{"name":"pentadec-1-ene anabolism","type":"exact"},{"name":"pentadec-1-ene biosynthesis","type":"exact"},{"name":"pentadec-1-ene formation","type":"exact"},{"name":"pentadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900873"}


id: PBO:0045300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 2","termid":"PBO:0045300"}


id: FYPO:0001453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethanol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to ethanol","synonyms":[{"name":"resistance to ethanol during mitotic cell cycle","type":"related"},{"name":"resistance to ethanol during vegetative growth","type":"exact"},{"name":"resistance to ethyl alcohol","type":"exact"},{"name":"resistant to ethanol","type":"exact"}],"termid":"FYPO:0001453"}


id: PBO:0055821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leupaxin","termid":"PBO:0055821"}


id: GO:0140438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a stearoyl group to an amino acid in a protein.","definition_xrefs":["PMID:26214738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"protein stearoylation","termid":"GO:0140438"}


id: GO:0031730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR5 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CCR5 chemokine receptor binding","synonyms":[{"name":"CCR5 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031730"}


id: GO:0141166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that chemically modifies 5-methylcytosine (5meC) to make it a substrate for the base excision repair pathway, which then restores the unmodified cytosine.","definition_xrefs":["PMID:31546611","PMID:36478523","PMID:21862972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"chromosomal 5-methylcytosine DNA demethylation pathway","synonyms":[{"name":"epigenetic 5-methylcytosine DNA demethylation","type":"related"},{"name":"epigenetic 5-methylcytosine DNA demethylation pathway","type":"related"},{"name":"epigenetic DNA demethylation","type":"related"}],"termid":"GO:0141166"}


id: MONDO:0015479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submucosal cleft palate","secondary_identifiers":["Orphanet:155878","GARD:19976","icd11.foundation:1848627578","MEDGEN:98472","UMLS:C0432103"],"termid":"MONDO:0015479","xrefs":{"Monarch":{"xref_id":"0015479"}}}


id: PBO:0082114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-CoA carboxylase, biotin containing enzyme; catalyzes carboxylation of cytosolic acetyl-CoA to form malonyl-CoA and regulates histone acetylation by regulating the availability of acetyl-CoA; rate-limiting step for de novo biosynthesis of long-chain fatty acids; translational regulation in response to nutrients and cell cycle stage depends on its upstream ORF; ACC1 has a paralog, HFA1, that arose from the whole genome duplication","termid":"PBO:0082114"}


id: PBO:0054463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1861","termid":"PBO:0054463"}


id: PBO:0030685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_morphology","termid":"PBO:0030685"}


id: GO:0048226
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Region of plant cell wall specialised to act as a seal to prevent back leakage of secreted material (analogous to tight junction between epithelial cells). Found particularly where root parenchymal cells secrete solutes into xylem vessels. The barrier is composed of suberin; a fatty substance, containing long chain fatty acids and fatty esters, also found in the cell walls of cork cells (phellem) in higher plants.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"Casparian strip","secondary_identifiers":["Wikipedia:Casparian_strip"],"termid":"GO:0048226"}


id: PR:O14226
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- exo84 gene.","definition_xrefs":["UniProtKB:O14226","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo84 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.08c","synonyms":[{"name":"Spom972h-exo84","type":"exact"}],"termid":"PR:O14226"}


id: GO:0051976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine via the intermediates alpha-aminoadipic acid and N2-acetyl-alpha-aminoadipate. This pathway of prokaryotic lysine biosynthesis via alpha-aminoadipate was discovered in the hyper-thermophilic Gram-negative eubacterium Thermus thermophilus. The pathway proceeds as follows: alpha-ketoglutarate is converted to homocitrate, which is metabolized to 3-carboxyhex-2-enedioate and then homoisocitrate. This is then decarboxylated to form alpha-ketoadipate, which is then converted to alpha-aminoadipate. This undergoes acetylation, to form N2-acetyl-alpha-aminoadipate, and is then phosphorylated to give N2-acetyl-alpha-aminoadipyl-delta-phosphate. This is converted to N2-acetyl-alpha-aminoadipate semialdehyde, which is then converted to N2-acetyl-L-lysine. A final deacetylation reaction produces L-lysine.","definition_xrefs":["MetaCyc:PWY-3081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via aminoadipic acid","termid":"GO:0019878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"lysine biosynthetic process via alpha-aminoadipate and N2-acetyl-alpha-aminoadipate","synonyms":[{"name":"lysine biosynthesis via aminoadipic acid and N2-acetyl-alpha-aminoadipate","type":"exact"},{"name":"lysine biosynthetic process via aminoadipic acid and N2-acetyl-alpha-aminoadipate","type":"exact"}],"termid":"GO:0051976"}


id: PBO:0112987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase required for biogenesis of small ribosomal subunit; conserved 18S rRNA cytosine acetyltransferase that modifies tRNAs assisted by adaptor Tan1p; responsible for incorporation of N4-acetylcytidine into mRNAs; human homolog NAT10 implicated in several types of cancer and premature aging","termid":"PBO:0112987"}


id: PBO:0059167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPV17 mitochondrial inner membrane protein like 2","termid":"PBO:0059167"}


id: PBO:0068251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N3","termid":"PBO:0068251"}


id: PATO:0000511
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000511 absolute disease sensitivity value (obsolete PATO:0000511)","termid":"PATO:0000511"}


id: PBO:0046283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 2","termid":"PBO:0046283"}


id: PBO:0024842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor GTPase Guf1 (predicted)","termid":"PBO:0024842"}


id: PBO:0088155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vesicle membrane protein (v-SNARE) with acyltransferase activity; involved in trafficking to and within the Golgi, endocytic trafficking to the vacuole, and vacuolar fusion; membrane localization due to prenylation at the carboxy-terminus; human homolog YKT6 can complement yeast ykt6 mutant","termid":"PBO:0088155"}


id: PBO:0034323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phenotype_of","termid":"PBO:0034323"}


id: FYECO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mycophenolic acid (MPA) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MPA","synonyms":[{"name":"+ mycophenolic acid","type":"exact"}],"termid":"FYECO:0000388"}


id: MOD:00291
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-aspartic acid residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-aspartato tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0286","PubMed:7819255","PubMed:9283079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-aspartato tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"tetra-mu3-sulfidotris(S-cysteinyliron)(O4-aspartatoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-aspartato tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00291"}


id: FYPO:0003475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arsenate reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal arsenate reductase activity","termid":"FYPO:0003475"}


id: GO:0060443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary gland are generated and organized. Morphogenesis refers to the creation of shape. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland morphogenesis","termid":"GO:0060443"}


id: PBO:0044874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 4B","termid":"PBO:0044874"}


id: GO:1990592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ufmylation process in which a polymer of the ubiquitin-like protein UFM1 is formed by linkages between lysine residues at position 69 of the UFM1 monomers, is added to a protein.","definition_xrefs":["PMID:25219498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyufmylation","termid":"GO:1990564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K69-linked ufmylation","termid":"GO:1990592"}


id: GO:0072391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"phenol metabolic process","termid":"GO:0072390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol biosynthetic process","termid":"GO:0072391"}


id: MONDO:0033010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 1","secondary_identifiers":["MEDGEN:1633225","DOID:0111195","UMLS:C4551486","OMIM:133200"],"synonyms":[{"name":"EKVP1","type":"related"},{"name":"Greither disease","type":"related"},{"name":"erythrokeratodermia Figurata, congenital familial, in plaques","type":"related"},{"name":"erythrokeratodermia variabilis","type":"related"},{"name":"erythrokeratodermia variabilis ET progressiva 1","type":"related"},{"name":"erythrokeratodermia variabilis Et progressiva","type":"related"},{"name":"erythrokeratodermia variabilis with erythema Gyratum Repens","type":"related"},{"name":"erythrokeratodermia, progressive symmetric","type":"related"},{"name":"keratosis palmoplantaris transgrediens Et progrediens","type":"related"}],"termid":"MONDO:0033010","xrefs":{"Monarch":{"xref_id":"0033010"}}}


id: FYPO:0002221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through the anaphase of meiosis II is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of meiotic cell cycle phase","termid":"FYPO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of meiotic anaphase II","synonyms":[{"name":"delayed meiotic anaphase II progression","type":"related"},{"name":"increased duration of meiotic anaphase II progression","type":"exact"},{"name":"prolonged meiotic anaphase II","type":"exact"}],"termid":"FYPO:0002221"}


id: PBO:0056679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEF2C antisense RNA 1","termid":"PBO:0056679"}


id: GO:0050997
data:
  {"annotated_genes":["SJAG_04842","SJAG_03743","SJAG_00946","SJAG_02464","SJAG_02734","SJAG_00706","SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031210"},{"annotations":[58566,64384,58855,72965,61663,57592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030976"}]},"cv_name":"molecular_function","definition":"Binding to a quaternary ammonium group, including glycine betaine, choline, carnitine and proline. A quaternary ammonium group is any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_00946":null,"SJAG_02464":null,"SJAG_02734":null,"SJAG_03743":null,"SJAG_03985":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"quaternary ammonium group binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"quaternary amine binding","type":"exact"}],"termid":"GO:0050997","terms_by_termid":{"GO:0030976":null,"GO:0031210":null}}


id: GO:0033982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate 6-phosphate + H+ = L-xylulose 5-phosphate + CO2.","definition_xrefs":["RHEA:14353","EC:4.1.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"3-dehydro-L-gulonate-6-phosphate decarboxylase activity","secondary_identifiers":["MetaCyc:RXN0-705","KEGG_REACTION:R07125"],"synonyms":[{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase (L-xylulose-5-phosphate-forming) activity","type":"related"},{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase activity","type":"related"},{"name":"3-keto-L-gulonate 6-phosphate decarboxylase activity","type":"related"},{"name":"KGPDC","type":"related"},{"name":"SgaH","type":"related"},{"name":"SgbH","type":"related"},{"name":"UlaD","type":"related"}],"termid":"GO:0033982"}


id: GO:0045433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during wing vibration where the male insect produces a species-specific acoustic signal called a love song.","definition_xrefs":["PMID:11092827","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"},{"relation_name":"part_of","term_name":"male courtship behavior, veined wing vibration","termid":"GO:0016545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, veined wing generated song production","synonyms":[{"name":"male courtship behavior, song production","type":"broad"},{"name":"male courtship behaviour, song production","type":"broad"},{"name":"male courtship behaviour, veined wing generated song production","type":"exact"}],"termid":"GO:0045433"}


id: GO:0150072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arginase activity.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:26670206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of arginase activity","termid":"GO:0150072"}


id: MONDO:0010210
data:
  {"annotated_genes":["SJAG_02334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86421],"is_not":false,"summary":null,"term":"MONDO:0010210"}]},"cv_name":"mondo","definition":"Any xeroderma pigmentosum in which the cause of the disease is a mutation in the XPA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0021190"],"is_obsolete":false,"name":"xeroderma pigmentosum group A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5624","MEDGEN:82775","NCIT:C3965","SCTID:43477006","UMLS:C0268135","DOID:0110843","Orphanet:276249","OMIM:278700"],"synonyms":[{"name":"XP group A","type":"exact"},{"name":"XP, group A","type":"related"},{"name":"XP-A","type":"exact"},{"name":"XP1","type":"exact"},{"name":"XPA","type":"exact"},{"name":"XPA xeroderma pigmentosum","type":"exact"},{"name":"xeroderma pigmentosum 1","type":"exact"},{"name":"xeroderma pigmentosum caused by mutation in XPA","type":"exact"},{"name":"xeroderma pigmentosum complementation group A","type":"exact"},{"name":"xeroderma pigmentosum group A","type":"exact"},{"name":"xeroderma pigmentosum group type A","type":"exact"},{"name":"xeroderma pigmentosum, complementation group A","type":"related"},{"name":"xeroderma pigmentosum, complementation group type a","type":"exact"},{"name":"xeroderma pigmentosum, group A","type":"exact"},{"name":"xeroderma pigmentosum, type 1","type":"related"}],"termid":"MONDO:0010210","terms_by_termid":{"MONDO:0010210":null},"xrefs":{"Monarch":{"xref_id":"0010210"}}}


id: PBO:0079835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 netrin receptor A","termid":"PBO:0079835"}


id: GO:0070522
data:
  {"annotated_genes":["SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75498],"is_not":false,"summary":null,"term":"GO:0070522"}]},"cv_name":"cellular_component","definition":"A heterodimeric nucleotide-excision repair complex that has endonuclease activity specific for bubble structures characteristic of certain DNA lesions. The subunits are known as XPF/ERCC4 and ERCC1 in mammals, and Rad1p and Rad10p in S. cerevisiae.","definition_xrefs":["PMID:14734547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02828":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"ERCC4-ERCC1 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Rad1-Rad10 complex","type":"exact"},{"name":"XPF-ERCC1 complex","type":"exact"}],"termid":"GO:0070522","terms_by_termid":{"GO:0070522":null}}


id: PBO:0039772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AQP5 and AQP2 antisense RNA 2","termid":"PBO:0039772"}


id: PBO:0047986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member C","termid":"PBO:0047986"}


id: PBO:0028271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_malate_dehydrogenase_(decarboxylating)_(NAD+)_activity","termid":"PBO:0028271"}


id: GO:2000541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein geranylgeranylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein geranylgeranylation","termid":"GO:2000539"},{"relation_name":"positively_regulates","term_name":"protein geranylgeranylation","termid":"GO:0018344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein geranylgeranylation","synonyms":[{"name":"positive regulation of C-terminal protein geranylgeranylation","type":"related"},{"name":"positive regulation of protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:2000541"}


id: GO:0018712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-5-oxohexanoyl-CoA + CoASH = 3-hydroxybutyryl-CoA + acetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA thiolase activity","secondary_identifiers":["MetaCyc:R7-RXN"],"termid":"GO:0018712"}


id: PBO:0074255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1C1","termid":"PBO:0074255"}


id: FYPO:0005898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is increased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during mitotic G1 phase","termid":"FYPO:0005897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to centromeric chromatin during mitotic G1 phase","synonyms":[{"name":"increased protein localisation to centromeric chromatin during mitotic G1 phase","type":"exact"},{"name":"increased protein localization to centromeric chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein localization to centromeric chromatin during G1 phase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0005898"}


id: FYPO:0008170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is decreased.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased cyclin-dependent protein kinase activity","termid":"FYPO:0008170"}


id: MONDO:0014113
data:
  {"annotated_genes":["SJAG_00993","SJAG_01181","SJAG_02342"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84799,84800,84801],"is_not":false,"summary":null,"term":"MONDO:0014113"}]},"cv_name":"mondo","definition":"Any cardiofaciocutaneous syndrome in which the cause of the disease is a mutation in the MAP2K1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiofaciocutaneous syndrome","termid":"MONDO:0015280"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005267"],"is_obsolete":false,"name":"cardiofaciocutaneous syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615279","UMLS:C3809006","DOID:0111462","GARD:15936","MEDGEN:815336"],"synonyms":[{"name":"CFC3","type":"related"},{"name":"MAP2K1 cardiofaciocutaneous syndrome","type":"exact"},{"name":"cardiofaciocutaneous syndrome 3","type":"exact"},{"name":"cardiofaciocutaneous syndrome caused by mutation in MAP2K1","type":"exact"},{"name":"cardiofaciocutaneous syndrome type 3","type":"exact"}],"termid":"MONDO:0014113","terms_by_termid":{"MONDO:0014113":null},"xrefs":{"Monarch":{"xref_id":"0014113"}}}


id: GO:0006805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:cab2","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"part_of","term_name":"cellular response to xenobiotic stimulus","termid":"GO:0071466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xenobiotic metabolic process","secondary_identifiers":["GO:0017144","Reactome:R-HSA-211981","Wikipedia:Drug_metabolism","Reactome:R-HSA-211859","Reactome:R-HSA-2161541","Reactome:R-HSA-9748784","Wikipedia:Xenobiotic_metabolism"],"synonyms":[{"name":"drug metabolic process","type":"related"},{"name":"drug metabolism","type":"related"},{"name":"xenobiotic metabolism","type":"exact"}],"termid":"GO:0006805"}


id: MONDO:1010858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lysosomal storage disease that occurs in emu.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disease, emu","secondary_identifiers":["OMIA:000616-8790"],"termid":"MONDO:1010858","xrefs":{"Monarch":{"xref_id":"1010858"}}}


id: PBO:0085720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in telomeric and mating-type locus silencing; interacts with Sir2p and also interacts with Gal11p, which is a component of the RNA pol II mediator complex; ESC8 has a paralog, IOC3, that arose from the whole genome duplication","termid":"PBO:0085720"}


id: PBO:0071899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 37","termid":"PBO:0071899"}


id: PR:Q9P371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sst2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMSH-like protease sst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.10","synonyms":[{"name":"Spom972h-sst2","type":"exact"},{"name":"suppressor of ste12 deletion protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P371"}


id: PBO:0000258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin Cdc12","termid":"PBO:0000258"}


id: PBO:0064507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit H","termid":"PBO:0064507"}


id: GO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeraniol + nucleoside triphosphate = all-trans-geranyl-geranyl monophosphate + nucleoside diphosphate.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenol kinase activity","termid":"GO:0052673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"geranylgeraniol kinase activity","synonyms":[{"name":"geranylgeraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0052671"}


id: PBO:0082451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2H2-type zinc finger protein required for ribosome assembly; shuttling factor which associates with pre-60S particles in the nucleus, accompanying them to the cytoplasm; cytoplasmic dissociation of Bud20p requires Drg1p; N-terminus harbors a nuclear localization signal (NLS) and a nuclear export signal (NES); cytoplasmic Bud20p is reimported by Kap123-dependent pathway; involved in bud-site selection; diploid mutants display a random budding pattern; similar to human ZNF593","termid":"PBO:0082451"}


id: PBO:0043674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 1B","termid":"PBO:0043674"}


id: PBO:0044103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A11","termid":"PBO:0044103"}


id: GO:0036239
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taxusin + [reduced NADPH-hemoprotein reductase] + O2 = 7beta-hydroxytaxusin + [oxidized NADPH-hemoprotein reductase] + H2O. Also converts 2alpha-hydroxytaxusin to 2alpha,7beta-dihydroxytaxusin.","definition_xrefs":["PMID:15157877","PMID:15178487","EC:1.14.14.182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"taxoid 7beta-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R09868"],"termid":"GO:0036239"}


id: PR:O74814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulation of nuclear pre-mRNA domain-containing protein 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0400 protein C337.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.03","secondary_identifiers":["UniProtKB:O74814"],"synonyms":[{"name":"Spom972h-RPRD1A","type":"exact"}],"termid":"PR:O74814"}


id: MOD:01329
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because duplicate and redundant with MOD:01061. Remap to MOD:01061","definition_xrefs":["DeltaMass:197"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01329 iodoacetic acid - site C (obsolete MOD:01329)","synonyms":[{"name":"Carboxymethyl","type":"related"},{"name":"Iodoacetic acid derivative","type":"related"}],"termid":"MOD:01329"}


id: PBO:0108937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 16","termid":"PBO:0108937"}


id: GO:0075049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont cell wall strengthening during entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of symbiont cell wall strengthening involved in entry into host (obsolete GO:0075049)","synonyms":[{"name":"modulation of symbiont cell wall strengthening during entry into host","type":"related"}],"termid":"GO:0075049"}


id: FYPO:0006007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the site of cell division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:26941334","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal duration of protein localization to cell division site","synonyms":[{"name":"normal duration of protein localisation to cell division site","type":"exact"},{"name":"normal duration of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"normal duration of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"normal duration of protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0006007"}


id: PBO:0017589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated beclin family protein Atg6","termid":"PBO:0017589"}


id: PBO:0067845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 147","termid":"PBO:0067845"}


id: PBO:0056705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal embryonic leucine zipper kinase","termid":"PBO:0056705"}


id: PBO:0071262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 7","termid":"PBO:0071262"}


id: MONDO:0005671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with organisms of the genus blastocystis. The species B. hominis is responsible for most infections. Parasitologic surveys have generally found small numbers of this species in human stools, but higher positivity rates and organism numbers in aids patients and other immunosuppressed patients (immunocompromised host). Symptoms include abdominal pain; diarrhea; constipation; vomiting; and fatigue.","definition_xrefs":["MESH:D016776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amebiasis","termid":"MONDO:0005644"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Blastocystis infectious disease","secondary_identifiers":["EFO:0007173","SCTID:721809007"],"synonyms":[{"name":"Blastocystis infection","type":"exact"},{"name":"infection, Blastocystis","type":"related"},{"name":"infections, Blastocystis","type":"related"}],"termid":"MONDO:0005671","xrefs":{"Monarch":{"xref_id":"0005671"}}}


id: GO:1905213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic chromosome condensation.","definition_xrefs":["GOC:TermGenie","PMID:23219725","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of chromosome condensation","termid":"GO:1902340"},{"relation_name":"is_a","term_name":"regulation of mitotic chromosome condensation","termid":"GO:1903379"},{"relation_name":"negatively_regulates","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic chromosome condensation","termid":"GO:1905213"}


id: MONDO:0005243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cushing syndrome (obsolete MONDO:0005243)","termid":"MONDO:0005243","xrefs":{"Monarch":{"xref_id":"0005243"}}}


id: GO:0034575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-isopropylaniline + H2O = 4'-(2-hydroxyisopropyl)phenylaniline + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0901"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-isopropylaniline dehydrogenase activity (obsolete GO:0034575)","termid":"GO:0034575"}


id: GO:2000901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cyclodextrin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"dextrin catabolic process","termid":"GO:1901027"},{"relation_name":"is_a","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cyclodextrin catabolic process","synonyms":[{"name":"cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000901"}


id: PBO:0073633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 18, pseudogene","termid":"PBO:0073633"}


id: PR:C6Y4D4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.09 gene.","definition_xrefs":["UniProtKB:C6Y4D4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C569.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.09","synonyms":[{"name":"Spom972h-SPCC569.09","type":"exact"}],"termid":"PR:C6Y4D4"}


id: PBO:0004649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb4","termid":"PBO:0004649"}


id: GO:0140636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which copper is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:32979421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"copper import into the mitochondrion","termid":"GO:0140636"}


id: GO:0007304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The construction of a chorion-containing eggshell. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eggshell formation","termid":"GO:0030703"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorion-containing eggshell formation","synonyms":[{"name":"eggshell formation","type":"broad"}],"termid":"GO:0007304"}


id: PBO:0081405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF252P antisense RNA 1","termid":"PBO:0081405"}


id: PBO:0111066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA, antisense cnt5","termid":"PBO:0111066"}


id: PBO:0048201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha5","termid":"PBO:0048201"}


id: FYPO:0005207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle is normal (i.e. indistinguishable from wild type) when cells are shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:21965528","PomBase:mah","PMID:872891","PMID:689088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation upon nitrogen source shift","synonyms":[{"name":"normal cell cycle regulation upon nitrogen source shift","type":"exact"},{"name":"normal cell cycle regulation upon nitrogen source shift during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to nitrogen source shift","type":"exact"},{"name":"normal mitotic cell cycle regulation upon nitrogen source shift during vegetative growth","type":"exact"}],"termid":"FYPO:0005207"}


id: GO:0016286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["OMIM:602754","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel activity","synonyms":[{"name":"SK KCa channels","type":"exact"},{"name":"SK calcium-activated potassium channel activity","type":"exact"},{"name":"small conductance KCa channels","type":"exact"}],"termid":"GO:0016286"}


id: GO:0022904
data:
  {"annotated_genes":["SJAG_02504","SJAG_01763","SJAG_00260","SJAG_01190","SJAG_MIT04","SJAG_MIT20","SJAG_02646","SJAG_01671","SJAG_03920","SJAG_00755","SJAG_01490","SJAG_00080","SJAG_MIT03","SJAG_04152","SJAG_01077","SJAG_00601","SJAG_03490","SJAG_02744","SJAG_02398","SJAG_MIT13","SJAG_01355","SJAG_07007","SJAG_05629","SJAG_00976","SJAG_07006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74083,113969,118770,108037,76217,115200,71633,118819,78512,114401,118792],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006123"},{"annotations":[112601],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[88944,88576,116497,112940],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006121"},{"annotations":[76216,103831,75491,61678,73455,113147,117427,71912,75390,118797],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006122"}]},"cv_name":"biological_process","definition":"A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.","definition_xrefs":["GOC:mtg_electron_transport","ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transport chain","termid":"GO:0022900"},{"relation_name":"part_of","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_04152":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"respiratory electron transport chain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-611105","Wikipedia:Electron_transfer"],"synonyms":[{"name":"6-phosphofructokinase reduction","type":"related"},{"name":"dihydrobiopterin reduction","type":"related"},{"name":"dihydrolipoamide reduction","type":"related"},{"name":"dihydrolipoylprotein reduction","type":"related"},{"name":"dihydropteridine reduction","type":"related"},{"name":"electron transfer","type":"exact"},{"name":"other pathways of electron transport","type":"related"},{"name":"oxidized glutathione reduction","type":"related"},{"name":"protein-disulfide reduction","type":"related"}],"termid":"GO:0022904","terms_by_termid":{"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null}}


id: GO:2001158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine catabolic process","termid":"GO:0033243"},{"relation_name":"is_a","term_name":"positive regulation of glutamate metabolic process","termid":"GO:2000213"},{"relation_name":"is_a","term_name":"positive regulation of proline metabolic process","termid":"GO:2000216"},{"relation_name":"is_a","term_name":"regulation of proline catabolic process to glutamate","termid":"GO:2001156"},{"relation_name":"positively_regulates","term_name":"proline catabolic process to glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of proline catabolic process to glutamate","synonyms":[{"name":"positive regulation of proline breakdown to glutamate","type":"exact"},{"name":"positive regulation of proline degradation to glutamate","type":"exact"},{"name":"positive regulation of proline oxidation","type":"related"}],"termid":"GO:2001158"}


id: PBO:0088058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase; involved in proteasome-dependent degradation of aberrant nuclear proteins; targets substrates with regions of exposed hydrophobicity containing 5 or more contiguous hydrophobic residues; contains intrinsically disordered regions that contribute to substrate recognition; prefers a window of exposed hydrophobicity that causes a particular level of protein insolubility, suggesting that San1p evolved to target highly aggregation-prone proteins","termid":"PBO:0088058"}


id: PBO:0065791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain and coiled-coil containing 1 like","termid":"PBO:0065791"}


id: MONDO:0015343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Secondary acute transverse myelitis (ATM) is characterized by focal inflammation within the spinal cord due to a known cause, usually an inflammatory disease.","definition_xrefs":["Orphanet:139420"],"gene_count":0,"genotype_count":0,"name":"obsolete secondary acute transverse myelitis (obsolete MONDO:0015343)","synonyms":[{"name":"disease-associated transverse myelitis","type":"exact"}],"termid":"MONDO:0015343","xrefs":{"Monarch":{"xref_id":"0015343"}}}


id: FYPO:0003326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal interphase microtubule nucleation","synonyms":[{"name":"normal interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"normal microtubule nucleation during interphase during vegetative growth","type":"exact"},{"name":"normal microtubule nucleation during interphase of mitotic cell cycle","type":"related"},{"name":"normal microtubule nucleation during mitotic interphase","type":"exact"}],"termid":"FYPO:0003326"}


id: PBO:0051374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR2-5 (pseudogene)","termid":"PBO:0051374"}


id: GO:0160040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A migrasome-mediated selective removal of damaged mitochondria process that maintains mitochondrion homeostasis in migrating cells.","definition_xrefs":["PMID:34108688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion distribution","termid":"GO:0048311"},{"relation_name":"is_a","term_name":"establishment of mitochondrion localization","termid":"GO:0051654"},{"relation_name":"is_a","term_name":"migracytosis","termid":"GO:0140495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"mitocytosis","termid":"GO:0160040"}


id: GO:0043582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sporangium over time, from its formation to the mature structure. A sporangium is a structure producing and containing spores.","definition_xrefs":["Wikipedia:Sporagium","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporangium development","synonyms":[{"name":"sporangia development","type":"exact"}],"termid":"GO:0043582"}


id: PR:Q10095
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.16c gene.","definition_xrefs":["UniProtKB:Q10095","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.16c","synonyms":[{"name":"Spom972h-SPAC11D3.16c","type":"exact"}],"termid":"PR:Q10095"}


id: PBO:0047001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A4, pseudogene","termid":"PBO:0047001"}


id: PBO:0077083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF interacting protein with forkhead associated domain","termid":"PBO:0077083"}


id: MONDO:0016899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Duchenne and Becker muscular dystrophies (DMD and BMD) are neuromuscular diseases characterized by progressive muscle wasting and weakness due to degeneration of skeletal, smooth and cardiac muscle.","definition_xrefs":["Orphanet:262"],"gene_count":0,"genotype_count":0,"name":"obsolete Duchenne and Becker muscular dystrophy (obsolete MONDO:0016899)","synonyms":[{"name":"severe dystrophinopathy, Duchenne and Becker type","type":"exact"}],"termid":"MONDO:0016899","xrefs":{"Monarch":{"xref_id":"0016899"}}}


id: GO:1903282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutathione peroxidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glutathione peroxidase activity","synonyms":[{"name":"regulation of GSH peroxidase activity","type":"exact"},{"name":"regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"regulation of selenium-glutathione peroxidase activity","type":"exact"}],"termid":"GO:1903282"}


id: PR:O13696
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD] subunit 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.03","secondary_identifiers":["UniProtKB:O13696"],"synonyms":[{"name":"NAD(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"SPAC11G7.03","type":"related"},{"name":"Spom972h-IDH3G","type":"exact"},{"name":"isocitric dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13696"}


id: PBO:0002983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine acetyltransferase (predicted)","termid":"PBO:0002983"}


id: PBO:0052319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1191","termid":"PBO:0052319"}


id: PBO:0073230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 3","termid":"PBO:0073230"}


id: PBO:0059230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L2","termid":"PBO:0059230"}


id: PATO:0001625
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functional quality held by the bearer when the latter exhibits increased ability to perform a regular function(s).","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"functional","termid":"PATO:0001510"},{"relation_name":"is_a","term_name":"having extra function","termid":"PATO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased functionality","synonyms":[{"name":"high functionality","type":"exact"}],"termid":"PATO:0001625"}


id: MONDO:0018472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial isolated trichomegaly is a rare genetic hair anomaly characterized by a prolonged anagen phase of the eyelash hairs, leading to extreme eyelash growth that may result in corneal irritation. Increased growth of hair on other parts of the face (eyebrows, cheeks, forehead) and/or the body (chest, arms, legs) may be associated.","definition_xrefs":["Orphanet:411788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichomegaly","termid":"MONDO:0008593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial isolated trichomegaly","secondary_identifiers":["MEDGEN:1639703","GARD:13167","SCTID:764523004","DOID:0111566","icd11.foundation:1611595637","UMLS:C4706941"],"termid":"MONDO:0018472","xrefs":{"Monarch":{"xref_id":"0018472"}}}


id: PBO:0114490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-coA synthetase isoform; along with Acs2p, acetyl-CoA synthetase isoform is the nuclear source of acetyl-coA for histone acetylation; expressed during growth on nonfermentable carbon sources and under aerobic conditions; metabolites mediate the formation of filament assemblies in meiotic cells, storing Acs1p in an inactive state and promoting efficient return to growth after starvation","termid":"PBO:0114490"}


id: PBO:0082533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-4 has a paralog, ASP3-2, that arose from a segmental duplication","termid":"PBO:0082533"}


id: PATO:0000537
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000537 acid sensitivity value (obsolete PATO:0000537)","termid":"PATO:0000537"}


id: PBO:0073680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 2","termid":"PBO:0073680"}


id: GO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced coenzyme F420 + CoB-S-S-CoM = coenzyme F420 + CoM-SH + CoB-SH.","definition_xrefs":["GOC:mengo_curators","PMID:9914308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"reduced coenzyme F420:heterodisulfide oxidoreductase activity","synonyms":[{"name":"F420-dependent heterodisulfide oxidoreductase activity","type":"exact"},{"name":"F420H2:heterodisulfide oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent heterodisulfide oxidoreductase activity","type":"exact"}],"termid":"GO:0052752"}


id: PATO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A trisomy quality inhering in a bearer by virtue of the bearer's having extra chromosomal material in only some of it's cells.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisomy","termid":"PATO:0001389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy","termid":"PATO:0001391"}


id: GO:0070610
data:
  {"annotated_genes":["SJAG_04666","SJAG_00610","SJAG_02278","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89199,92190,94698,102599],"is_not":false,"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-alpha glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in fungal-type cell walls, including those of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall biogenesis","termid":"GO:0032995"},{"relation_name":"is_a","term_name":"regulation of cell wall (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070608"},{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070609"},{"relation_name":"regulates","term_name":"fungal-type cell wall (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070600"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085","GO:0005975"],"is_obsolete":false,"name":"regulation of fungal-type cell wall (1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of fungal type cell wall 1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan anabolism","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan formation","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan synthesis","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan anabolism","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan biosynthesis","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan biosynthetic process","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan formation","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0070610","terms_by_termid":{"GO:0070610":null}}


id: PBO:0074922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 91A","termid":"PBO:0074922"}


id: PBO:0004525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucosidase Psu2 (predicted)","termid":"PBO:0004525"}


id: MONDO:0859367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 96","secondary_identifiers":["OMIM:620228","MEDGEN:1824076","UMLS:C5774303"],"termid":"MONDO:0859367","xrefs":{"Monarch":{"xref_id":"0859367"}}}


id: PBO:0038360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transports","termid":"PBO:0038360"}


id: PBO:0052095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 12","termid":"PBO:0052095"}


id: PBO:0039062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylglycerol kinase","termid":"PBO:0039062"}


id: PBO:0026677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_sodium_dodecyl_sulfate","termid":"PBO:0026677"}


id: PBO:0117244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptidyl tRNA hydrolase, stalled-ribosome rescue factor srRF1, Pth4","termid":"PBO:0117244"}


id: PBO:0046166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF3 antisense RNA 1","termid":"PBO:0046166"}


id: PBO:0110476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERRY endosomal RAB5 effector complex subunit 3","termid":"PBO:0110476"}


id: PBO:0044996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIAPH2 antisense RNA 1","termid":"PBO:0044996"}


id: PR:Q9UT18
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi9 gene.","definition_xrefs":["UniProtKB:Q9UT18","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transporter thi9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.10","synonyms":[{"name":"Spom972h-thi9","type":"exact"}],"termid":"PR:Q9UT18"}


id: GO:0047827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysopine + H2O + NADP+ = L-lysine + H+ + NADPH + pyruvate.","definition_xrefs":["EC:1.5.1.16","RHEA:17625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-lysopine dehydrogenase activity","secondary_identifiers":["MetaCyc:D-LYSOPINE-DEHYDROGENASE-RXN","KEGG_REACTION:R00452"],"synonyms":[{"name":"2-N-(D-1-carboxyethyl)-L-lysine:NADP+ oxidoreductase (L-lysine-forming)","type":"related"},{"name":"D(+)-lysopine dehydrogenase activity","type":"related"},{"name":"D-lysopine synthase activity","type":"related"},{"name":"N2-(D-1-carboxyethyl)-L-lysine:NADP+ oxidoreductase (L-lysine-forming)","type":"related"},{"name":"lysopine dehydrogenase activity","type":"related"}],"termid":"GO:0047827"}


id: PATO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morphology","termid":"PATO:0000051"}


id: PBO:0002816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set3","termid":"PBO:0002816"}


id: PBO:0042417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 1","termid":"PBO:0042417"}


id: GO:2000698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation involved in kidney development.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"positively_regulates","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"}


id: PBO:0030921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_plasmid_loss","termid":"PBO:0030921"}


id: PBO:0083245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; extensive overlap with PGA2/YNL149C, an uncharacterized gene with a proposed role in protein trafficking","termid":"PBO:0083245"}


id: PBO:0114290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain-containing protein, involved in endocytosis pathway","termid":"PBO:0114290"}


id: PBO:0027769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_during_anaphase","termid":"PBO:0027769"}


id: PBO:0050586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HS6ST2 antisense RNA 1","termid":"PBO:0050586"}


id: MOD:00566
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"label cysteine with IGBP reagent","synonyms":[{"name":"IGBP","type":"related"},{"name":"Light IDBEST tag for quantitation","type":"related"}],"termid":"MOD:00566"}


id: PBO:0111784
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-UBP type","termid":"PBO:0111784"}


id: PBO:0054330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1723","termid":"PBO:0054330"}


id: MONDO:0004137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0004137 (obsolete MONDO:0004137)","termid":"MONDO:0004137","xrefs":{"Monarch":{"xref_id":"0004137"}}}


id: GO:1905232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-glutamate(1-) stimulus.","definition_xrefs":["GOC:TermGenie","PMID:25962137","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to L-glutamate","termid":"GO:1902065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-glutamate","synonyms":[{"name":"cellular response to L-glutamate(1-)","type":"related"}],"termid":"GO:1905232"}


id: GO:0032877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA endoreduplication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA endoreduplication","termid":"GO:0032875"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication","termid":"GO:2000105"},{"relation_name":"positively_regulates","term_name":"DNA endoreduplication","termid":"GO:0042023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA endoreduplication","synonyms":[{"name":"activation of DNA endoreduplication","type":"narrow"},{"name":"positive regulation of DNA endoreplication","type":"exact"},{"name":"positive regulation of DNA re-duplication","type":"exact"},{"name":"stimulation of DNA endoreduplication","type":"narrow"},{"name":"up regulation of DNA endoreduplication","type":"exact"},{"name":"up-regulation of DNA endoreduplication","type":"exact"},{"name":"upregulation of DNA endoreduplication","type":"exact"}],"termid":"GO:0032877"}


id: PBO:0001923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Ucp14","termid":"PBO:0001923"}


id: PBO:0089174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L21/aconitate hydratase, fusion protein","termid":"PBO:0089174"}


id: MONDO:1010098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital heart disease caused by pathogenic variation(s) in the TFAP2B gene, which encodes the transcription factor AP-2β. This disorder is characterized by patent ductus arteriosus, facial dysmorphism and hand anomalies. Additional features include sensorineural hearing loss, scoliosis, dental anomalies, and central diabetes insipidus. Given the spectrum of symptoms associated with this condition, patients may exhibit a combination of these features. The underlying mechanism of the spectrum disorder is both dominant negative and loss-of-function. Pathogenic missense variants reported in Char syndrome patients appear to be dominant negative while loss-of-function alleles in PDA patients are likely to act through haploinsufficiency.","definition_xrefs":["PMID:31012281","Orphanet:466729","Orphanet:46627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"TFAP2B-related congenital heart disease spectrum disorder","synonyms":[{"name":"TFAP2B-related PDA and Char syndrome spectrum disorder","type":"exact"}],"termid":"MONDO:1010098","xrefs":{"Monarch":{"xref_id":"1010098"}}}


id: PBO:0044690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDR1 divergent transcript","termid":"PBO:0044690"}


id: PBO:0059267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPL32 pseudogene 1","termid":"PBO:0059267"}


id: PBO:0114862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein, probable hydrogen sulfide sensing ubiquitin ligase adaptor Pof1","termid":"PBO:0114862"}


id: FYPO:0005223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of histone H2B to chromatin at one or more protein-coding genes is decreased.","definition_xrefs":["PomBase:mah","PMID:23028377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at protein coding gene","termid":"FYPO:0008249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H2B localization to chromatin at protein coding gene","synonyms":[{"name":"decreased histone H2B localisation to chromatin at protein coding gene","type":"exact"},{"name":"decreased histone H2B localization to chromatin at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H2B localization to chromatin at protein-coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H2B localization to chromatin at protein coding gene","type":"exact"}],"termid":"FYPO:0005223"}


id: PBO:0059182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin","termid":"PBO:0059182"}


id: PBO:0031185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_thiamine_level","termid":"PBO:0031185"}


id: MONDO:0011611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, intellectual disability, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","secondary_identifiers":["OMIM:605856","MEDGEN:370814","UMLS:C1970039","MESH:C566989"],"synonyms":[{"name":"short stature, intellectual disability, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","type":"exact"},{"name":"short stature, mental retardation, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","type":"exact"}],"termid":"MONDO:0011611","xrefs":{"Monarch":{"xref_id":"0011611"}}}


id: GO:0052924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5 isopentenyl diphosphate + (2E,6E,10E)-geranylgeranyl diphosphate = all-trans-nonaprenyl diphosphate + 5 diphosphate.","definition_xrefs":["RHEA:27594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity","secondary_identifiers":["MetaCyc:RXN-11486","EC:2.5.1.85","KEGG_REACTION:R09251"],"synonyms":[{"name":"nonaprenyl diphosphate synthase activity","type":"broad"},{"name":"solanesyl diphosphate synthase activity","type":"broad"},{"name":"solanesyl diphosphate synthetase activity","type":"broad"}],"termid":"GO:0052924"}


id: MONDO:0009205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Faciocardiorenal syndrome is a very rare syndrome characterized by intellectual deficit, horseshoe kidney, and congenital heart defects.","definition_xrefs":["Orphanet:1973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faciocardiorenal syndrome","secondary_identifiers":["MEDGEN:208649","GARD:2230","OMIM:227280","SCTID:723333000","UMLS:C0795936","MESH:C536388"],"synonyms":[{"name":"Eastman Bixler syndrome","type":"related"},{"name":"Eastman-Bixler syndrome","type":"exact"},{"name":"faciocardiorenal syndrome","type":"exact"}],"termid":"MONDO:0009205","xrefs":{"Monarch":{"xref_id":"0009205"}}}


id: PBO:0047329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas binding factor 1","termid":"PBO:0047329"}


id: PBO:0029741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spheroid_cell_during_nitrogen_starvation","termid":"PBO:0029741"}


id: MONDO:0016595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acute systemic infection caused by the inhalation of Bacillus anthracis spores (e.g. through infected animal products, bioterrorism) and characterized by an initial stage where patients present with non specific symptoms (fever, cough, chills, fatigue) that is followed by an acute phase during which hemorrhagic mediastinitis occurs that can progress into meningitis, gastrointestinal involvement, and refractory shock, that can be fatal, if left untreated.","definition_xrefs":["Orphanet:247257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anthrax infection","termid":"MONDO:0005119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhalational anthrax","secondary_identifiers":["MESH:C571912","UMLS:C0155866","ICD9:022.1","GARD:20657","DOID:0050160","SCTID:11389007","MedDRA:10035667","MEDGEN:57841"],"synonyms":[{"name":"inhalation anthrax","type":"related"},{"name":"inhalation anthrax disease","type":"exact"},{"name":"pulmonary anthrax","type":"exact"},{"name":"respiratory anthrax","type":"exact"},{"name":"respiratory anthrax disease","type":"exact"},{"name":"wool-sorters' disease","type":"exact"},{"name":"woolsorters' disease","type":"exact"}],"termid":"MONDO:0016595","xrefs":{"Monarch":{"xref_id":"0016595"}}}


id: GO:0034945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA + CoASH = 3-isopropylbut-3-enoyl-CoA + propanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0987"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA C-acetyltransferase activity (obsolete GO:0034945)","termid":"GO:0034945"}


id: MONDO:0012430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dysequilibrium syndrome in which the cause of the disease is a mutation in the WDR81 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, intellectual disability, and dysequilibrium","termid":"MONDO:0009133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 2","secondary_identifiers":["UMLS:C2750234","GARD:15473","MESH:C567656","DOID:0070557","MEDGEN:412914","OMIM:610185"],"synonyms":[{"name":"CAMRQ2","type":"related"},{"name":"WDR81 dysequilibrium syndrome","type":"exact"},{"name":"cerebellar ataxia and intellectual disability with or without quadrupedal locomotion 2","type":"related"},{"name":"cerebellar ataxia and mental retardation with or without quadrupedal locomotion 2","type":"related"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 2","type":"exact"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome type 2","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome 2","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome type 2","type":"exact"},{"name":"dysequilibrium syndrome caused by mutation in WDR81","type":"exact"}],"termid":"MONDO:0012430","xrefs":{"Monarch":{"xref_id":"0012430"}}}


id: MONDO:0022611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Brunoni syndrome","secondary_identifiers":["GARD:1032","MEDGEN:444066","MESH:C537408","UMLS:C2931486"],"synonyms":[{"name":"mesomelia, radial hypoplasia bifid thumb unusual facies","type":"related"},{"name":"mesomelic dwarfism, skeletal abnormalities, and ectodermal dysplasia","type":"related"}],"termid":"MONDO:0022611","xrefs":{"Monarch":{"xref_id":"0022611"}}}


id: PBO:0083053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol pyrophosphate (DGPP) phosphatase; zinc-regulated vacuolar membrane-associated lipid phosphatase, dephosphorylates DGPP to phosphatidate (PA) and Pi, then PA to diacylglycerol; involved in lipid signaling and cell metabolism","termid":"PBO:0083053"}


id: PBO:0066737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 34","termid":"PBO:0066737"}


id: PATO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000852 relative auditory threshold (obsolete PATO:0000852)","termid":"PATO:0000852"}


id: MONDO:0014184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A communication disorder that involves the processing of linguistic information.","direct_ancestors":[{"relation_name":"is_a","term_name":"specific language impairment","termid":"MONDO:0000724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific language impairment 5","secondary_identifiers":["EFO:0005425","UMLS:C3809483","OMIM:615432","MEDGEN:815813"],"synonyms":[{"name":"SLI5","type":"exact"},{"name":"specific language impairment 5","type":"exact"},{"name":"specific language impairment type 5","type":"exact"}],"termid":"MONDO:0014184","xrefs":{"Monarch":{"xref_id":"0014184"}}}


id: PBO:0056338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K20 antisense RNA 1","termid":"PBO:0056338"}


id: GO:2000969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of AMPA selective glutamate receptor activity.","definition_xrefs":["PMID:21423165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"},{"relation_name":"is_a","term_name":"regulation of AMPA receptor activity","termid":"GO:2000311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0023052","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of AMPA receptor activity","synonyms":[{"name":"positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity","type":"broad"}],"termid":"GO:2000969"}


id: PBO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc2 (predicted)","termid":"PBO:0002257"}


id: GO:0044560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of an ion channel in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation perturbing biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of ion channel activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of ion channel activity in other organism","type":"exact"},{"name":"envenomation resulting in regulation of ion channel activity in other organism","type":"exact"}],"termid":"GO:0044560"}


id: PBO:0054042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1378","termid":"PBO:0054042"}


id: MONDO:0016640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibrous dysplasia of bone (obsolete MONDO:0016640)","termid":"MONDO:0016640","xrefs":{"Monarch":{"xref_id":"0016640"}}}


id: SO:0002376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for H_ACA_box_snoRNA. Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.","definition_xrefs":["PMID:12457565","PMID:22065625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_gene","termid":"SO:0001267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_snoRNA_gene","synonyms":[{"name":"box H/ACA snoRNA gene, H ACA box snoRNA gene, H/ACA box snoRNA gene","type":"exact"}],"termid":"SO:0002376"}


id: MONDO:0006530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathologic process characterized by the proliferation of keratinizing squamous epithelium resulting in the accumulation of keratin and cells in the middle ear and/or mastoid. It may be congenital or acquired. If left untreated, it may increase in size and destroy adjacent structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cholesteatoma","secondary_identifiers":["ICD9:385.30","SCTID:363668000","EFO:1000675","UMLS:C0008373","MEDGEN:3043","DOID:869","HP:0009797","MESH:D002781","NCIT:C2944"],"synonyms":[{"name":"cholesteatoma","type":"exact"},{"name":"cholesteatoma (disease)","type":"exact"},{"name":"congenital cholesteatoma (type)","type":"related"},{"name":"primary acquired cholesteatoma (type)","type":"related"},{"name":"secondary acquired cholesteatoma (type)","type":"related"}],"termid":"MONDO:0006530","xrefs":{"Monarch":{"xref_id":"0006530"}}}


id: GO:0099609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the side of a microtubule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule binding","termid":"GO:0008017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008017"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0005488","GO:0008017","GO:0003674"],"is_obsolete":false,"name":"microtubule lateral binding","termid":"GO:0099609"}


id: MONDO:0020033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of digestive system neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare digestive tumor (obsolete MONDO:0020033)","secondary_identifiers":["Orphanet:98059"],"synonyms":[{"name":"rare digestive cancer","type":"exact"},{"name":"rare digestive neoplasm","type":"exact"},{"name":"rare digestive system neoplasm","type":"exact"}],"termid":"MONDO:0020033","xrefs":{"Monarch":{"xref_id":"0020033"}}}


id: GO:0016227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-cysteine + 'activated' tRNA = L-serine + tRNA containing a thionucleotide.","definition_xrefs":["EC:2.8.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA sulfurtransferase activity (obsolete GO:0016227)","synonyms":[{"name":"L-cysteine:tRNA sulfurtransferase activity","type":"related"},{"name":"RNA sulfurtransferase activity","type":"related"},{"name":"ribonucleate sulfurtransferase activity","type":"related"},{"name":"tRNA sulfurtransferase activity","type":"exact"},{"name":"tRNA sulphurtransferase activity","type":"exact"},{"name":"transfer RNA sulfurtransferase activity","type":"related"},{"name":"transfer RNA thiolase activity","type":"related"},{"name":"transfer ribonucleate sulfurtransferase activity","type":"related"}],"termid":"GO:0016227"}


id: MONDO:0957452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"segmental arterial mediolysis","secondary_identifiers":["Orphanet:645350","MEDGEN:1387331","icd11.foundation:1160127418","UMLS:C4517096"],"termid":"MONDO:0957452","xrefs":{"Monarch":{"xref_id":"0957452"}}}


id: MONDO:0003002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor characterized by the presence of a monotonous primitive germ cell population. The neoplastic cells form aggregates and have an abundant pale cytoplasm and uniform nuclei. The aggregates of the germ cells are separated by fibrous septa which contain inflammatory cells, mostly T-lymphocytes. It arises primarily in the ovaries, but can occur both primarily and secondarily at other sites, particularly the central nervous system. It responds to chemotherapy and radiotherapy. Its prognosis is related to the tumor stage.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"germinomatous germ cell tumor","termid":"MONDO:0020580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"dysgerminoma","secondary_identifiers":["HP:0100621","icd11.foundation:817547820","UMLS:C0013377","MEDGEN:41680","NCIT:C2996","MESH:D004407","DOID:4441","NANDO:2200066","ICDO:9060/3"],"synonyms":[{"name":"dysgerminoma","type":"exact"},{"name":"dysgerminoma (disease)","type":"exact"},{"name":"dysgerminoma, malignant","type":"exact"}],"termid":"MONDO:0003002","xrefs":{"Monarch":{"xref_id":"0003002"}}}


id: PATO:0001098
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001098 absolute force (obsolete PATO:0001098)","termid":"PATO:0001098"}


id: MONDO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A potentially life-threatening pregnancy-related disorder characterized by tonic-clonic seizures in association with hypertension after the twentieth week of gestation and up to six weeks postpartum and in the absence of other potential causes of seizures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"preeclampsia","termid":"MONDO:0005081"},{"relation_name":"is_a","term_name":"toxemia of pregnancy","termid":"MONDO:0045048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eclampsia","secondary_identifiers":["NCIT:C87167","ICD9:642.64","MEDGEN:4443","SCTID:303063000","UMLS:C0013537","DOID:13593","ICD10CM:O15","icd11.foundation:1759760659","MESH:D004461"],"synonyms":[{"name":"eclampsia in puerperium","type":"exact"},{"name":"eclampsia, postpartum","type":"exact"},{"name":"postpartum eclampsia","type":"exact"}],"termid":"MONDO:0001754","xrefs":{"Monarch":{"xref_id":"0001754"}}}


id: MONDO:0013163
data:
  {"annotated_genes":["SJAG_01896"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86440],"is_not":false,"summary":null,"term":"MONDO:0013163"}]},"cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the XPNPEP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis-like nephropathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613159","UMLS:C3150419","DOID:0111117","GARD:18180","MEDGEN:461769"],"synonyms":[{"name":"NPHP-XPNPEP3","type":"exact"},{"name":"NPHPL1","type":"exact"},{"name":"XPNPEP3 nephronophthisis (disease)","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in XPNPEP3","type":"exact"},{"name":"nephronophthisis-like nephropathy 1","type":"exact"},{"name":"nephronophthisis-like nephropathy type 1","type":"exact"}],"termid":"MONDO:0013163","terms_by_termid":{"MONDO:0013163":null},"xrefs":{"Monarch":{"xref_id":"0013163"}}}


id: PBO:0073768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 1 adaptor protein pseudogene 2","termid":"PBO:0073768"}


id: PBO:0075906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6","termid":"PBO:0075906"}


id: PBO:0038924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G6","termid":"PBO:0038924"}


id: PBO:0046222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 15","termid":"PBO:0046222"}


id: PBO:0067799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 101","termid":"PBO:0067799"}


id: MONDO:0009237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperplasia characterized by the presence of a focal proliferation of epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"},{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal epithelial hyperplasia","secondary_identifiers":["MEDGEN:60066","UMLS:C0206067","MESH:D017573","DOID:5362","OMIM:229045","EFO:0007275","NCIT:C97083","SCTID:6121001","ICD9:528.79"],"synonyms":[{"name":"FEH, oral","type":"related"},{"name":"focal epithelial hyperplasia, oral","type":"related"},{"name":"heck disease","type":"exact"},{"name":"heck's disease","type":"exact"},{"name":"multifocal epithelial hyperplasia","type":"exact"}],"termid":"MONDO:0009237","xrefs":{"Monarch":{"xref_id":"0009237"}}}


id: PBO:0082459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX box containing protein of unknown function; proposed to be involved in the RAS/cAMP signaling pathway","termid":"PBO:0082459"}


id: PBO:0057400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548h-2","termid":"PBO:0057400"}


id: GO:0043452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an alkyne, any acyclic branched or unbranched hydrocarbon (compound composed only of carbon and hydrogen) having a carbon-carbon triple bond and the general formula CnH2n-2, as carried out by individual cells.","definition_xrefs":["GOC:krc","GOC:jl","Wikipedia:Alkyne"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkyne metabolic process","synonyms":[{"name":"alkyne metabolism","type":"exact"}],"termid":"GO:0043452"}


id: PR:O13811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi2 gene.","definition_xrefs":["UniProtKB:O13811","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide-isomerase C17H9.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.14c","synonyms":[{"name":"Spom972h-pdi2","type":"exact"}],"termid":"PR:O13811"}


id: PBO:0066839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 139","termid":"PBO:0066839"}


id: GO:0036471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glyoxal stimulus.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glyoxal","termid":"GO:0036471"}


id: PBO:0027044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_2-oxoglutarate_dioxygenase_activity","termid":"PBO:0027044"}


id: SO:0100007
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of 4 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i: psi -10 bounds -50 to 30, res i+1: phi -90 bounds -120 to -60, res i+1: psi -10 bounds -50 to 30, res i+2: phi -75 bounds -100 to -50, res i+2: psi 140 bounds 110 to 170. The extra restriction of the length of the O to O distance is similar, that it be less than 5 Angstrom. In this case these two Oxygen atoms are the main chain carbonyl oxygen atoms of residues i-1 and i+2.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"catmat_right_handed_four","synonyms":[{"name":"catmat-4r","type":"exact"}],"termid":"SO:0100007"}


id: GO:0030286
data:
  {"annotated_genes":["SJAG_01370","SJAG_00113","SJAG_02561","SJAG_02286","SJAG_01662"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87513,90748,77128,65785,79421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005868"}]},"cv_name":"cellular_component","definition":"Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_01370":null,"SJAG_01662":null,"SJAG_02286":null,"SJAG_02561":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dynein complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030286","terms_by_termid":{"GO:0005868":null}}


id: PBO:0016097
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POmbe Boi","termid":"PBO:0016097"}


id: PBO:0072199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 16","termid":"PBO:0072199"}


id: PBO:0076069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling receptor and transporter of retinol STRA6","termid":"PBO:0076069"}


id: FYPO:0003350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase B does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:0000092","GO:1902967","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle midzone during anaphase","termid":"FYPO:0004412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone during anaphase B","synonyms":[{"name":"abolished protein localization to spindle midzone during mitotic anaphase B","type":"exact"},{"name":"protein absent from mitotic spindle midzone during anaphase B","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished during anaphase B","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished during anaphase B","type":"exact"},{"name":"protein localization to spindle midzone abolished during anaphase B during vegetative growth","type":"exact"}],"termid":"FYPO:0003350"}


id: GO:0015527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerol phosphate(out) + phosphate(in) = glycerol phosphate(in) + phosphate(out).","definition_xrefs":["TC:2.A.1.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glycerol-phosphate:phosphate antiporter activity","synonyms":[{"name":"glycerol-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0015527"}


id: GO:1902259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:11299204","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"}


id: GO:0004730
data:
  {"annotated_genes":["SJAG_03213"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79422],"is_not":false,"summary":null,"term":"GO:0004730"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + uracil = H2O + pseudouridine 5'-phosphate.","definition_xrefs":["EC:4.2.1.70","RHEA:18337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pseudouridylate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN0-5398","KEGG_REACTION:R01055"],"synonyms":[{"name":"5-ribosyluracil 5-phosphate synthetase activity","type":"related"},{"name":"pseudouridine monophosphate synthase activity","type":"exact"},{"name":"pseudouridine monophosphate synthetase activity","type":"related"},{"name":"pseudouridine-5'-phosphate glycosidase activity","type":"exact"},{"name":"pseudouridylate synthetase activity","type":"related"},{"name":"pseudouridylic acid synthetase activity","type":"related"},{"name":"psiUMP synthetase activity","type":"related"},{"name":"uracil hydro-lyase (adding D-ribose 5-phosphate)","type":"related"},{"name":"uracil hydro-lyase (adding D-ribose 5-phosphate; pseudouridine-5'-phosphate-forming)","type":"related"},{"name":"uracil hydrolyase activity","type":"related"}],"termid":"GO:0004730","terms_by_termid":{"GO:0004730":null}}


id: MONDO:0010955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal dysplasia with intellectual disability and syndactyly","secondary_identifiers":["UMLS:C1833169","MESH:C538018","OMIM:600906","MEDGEN:322135"],"synonyms":[{"name":"ectodermal dysplasia intellectual disability syndactyly","type":"related"},{"name":"ectodermal dysplasia mental retardation syndactyly","type":"related"},{"name":"ectodermal dysplasia with intellectual disability and syndactyly","type":"exact"},{"name":"ectodermal dysplasia with mental retardation and syndactyly","type":"exact"}],"termid":"MONDO:0010955","xrefs":{"Monarch":{"xref_id":"0010955"}}}


id: GO:0061864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of molecules that form the basement membrane, including carbohydrates and glycoproteins by a cell.","definition_xrefs":["PMID:28228250","PMID:26610918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix constituent secretion","termid":"GO:0070278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"basement membrane constituent secretion","termid":"GO:0061864"}


id: GO:1901440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(hydroxyalkanoate).","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) metabolic process","synonyms":[{"name":"poly(hydroxyalkanoate) metabolism","type":"exact"}],"termid":"GO:1901440"}


id: GO:0030930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of four identical subunits that possesses ADPG pyrophosphorylase activity. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADPG pyrophosphorylase complex","termid":"GO:0030929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"homotetrameric ADPG pyrophosphorylase complex","termid":"GO:0030930"}


id: PBO:0054246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1628","termid":"PBO:0054246"}


id: PBO:0073428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a subunit 3","termid":"PBO:0073428"}


id: GO:0008277
data:
  {"annotated_genes":["SJAG_00266","SJAG_02311","SJAG_01245","SJAG_02426","SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92515,91851,107722,100197,116122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"regulation of G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"regulation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of GPCR protein signaling pathway","type":"exact"},{"name":"regulation of GPCR protein signalling pathway","type":"exact"}],"termid":"GO:0008277","terms_by_termid":{"GO:0110034":null}}


id: PBO:0110037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISG20L2 pseudogene 2","termid":"PBO:0110037"}


id: GO:1905573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GM1.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","PMID:1454804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"ganglioside GM1 binding","termid":"GO:1905573"}


id: PBO:0087551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP; RNase MRP processes pre-rRNA and has a role in cell cycle-regulated degradation of daughter cell-specific mRNAs; unlike most subunits, not shared between RNase MRP and nuclear RNase P","termid":"PBO:0087551"}


id: GO:0004026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an alcohol = CoA + an acetyl ester.","definition_xrefs":["EC:2.3.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"},{"relation_name":"is_a","term_name":"alcohol O-acyltransferase activity","termid":"GO:0034318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"alcohol O-acetyltransferase activity","secondary_identifiers":["RHEA:17229","MetaCyc:ALCOHOL-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"AATASE activity","type":"related"},{"name":"acetyl-CoA:alcohol O-acetyltransferase activity","type":"related"},{"name":"alcohol acetyltransferase activity","type":"related"}],"termid":"GO:0004026"}


id: GO:0072196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in pronephric nephron development","synonyms":[{"name":"pronephros proximal/distal pattern formation","type":"exact"}],"termid":"GO:0072196"}


id: PBO:0046751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 5 pseudogene 1","termid":"PBO:0046751"}


id: GO:0043384
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex found on immature T cells consisting of a T cell receptor beta chain and the pre-TCR-alpha chain, along with additional signaling components including CD3 family members and additional signaling proteins.","definition_xrefs":["ISBN:0781735149","PMID:12220932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"pre-T cell receptor complex","synonyms":[{"name":"pre-T lymphocyte receptor complex","type":"exact"},{"name":"pre-T-cell receptor complex","type":"exact"},{"name":"pre-T-lymphocyte receptor complex","type":"exact"},{"name":"pre-TCR complex","type":"exact"}],"termid":"GO:0043384"}


id: MONDO:0033170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"statin toxicity","secondary_identifiers":["Orphanet:413696"],"termid":"MONDO:0033170","xrefs":{"Monarch":{"xref_id":"0033170"}}}


id: PBO:0017525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2, Gim4(predicted)","termid":"PBO:0017525"}


id: MONDO:0041052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"post-infectious neuralgia","termid":"MONDO:0021677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"postherpetic neuralgia","secondary_identifiers":["MEDGEN:18589","Orphanet:466673","SCTID:2177002","icd11.foundation:1797210650","UMLS:C0032768"],"synonyms":[{"name":"PHN - post-herpetic neuralgia","type":"related"},{"name":"post-zoster neuralgia","type":"related"},{"name":"postherpetic neuralgia","type":"exact"}],"termid":"MONDO:0041052","xrefs":{"Monarch":{"xref_id":"0041052"}}}


id: MOD:01035
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlorobenzyl","synonyms":[{"name":"ClBzl","type":"exact"}],"termid":"MOD:01035"}


id: PBO:0050986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 70A","termid":"PBO:0050986"}


id: PBO:0086853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA binding protein; regulates the cell size requirement for passage through Start and commitment to cell division; WHI4 has a paralog, WHI3, that arose from the whole genome duplication","termid":"PBO:0086853"}


id: PBO:0112741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 2 (gene/pseudogene)","termid":"PBO:0112741"}


id: GO:0019316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-allose metabolic process","termid":"GO:0019314"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"D-allose catabolic process","secondary_identifiers":["MetaCyc:PWY0-44"],"synonyms":[{"name":"D-allose breakdown","type":"exact"},{"name":"D-allose catabolism","type":"exact"},{"name":"D-allose degradation","type":"exact"}],"termid":"GO:0019316"}


id: GO:0061568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into GDP, guanosine diphosphate, to produce GTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"gene_count":0,"genotype_count":0,"name":"obsolete GDP phosphorylation (obsolete GO:0061568)","termid":"GO:0061568"}


id: PBO:0017632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 Ufd2 (predicted)","termid":"PBO:0017632"}


id: MONDO:0009979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reticular dystrophy of the retinal pigment epithelium is a patterned dystrophy of the retinal pigment epithelium, of progressive course, characterized by the presence of a bilateral hyperpigmented reticular pattern resembling a fishnet with knots, resulting in a slowly progressive loss of vision that often only becomes apparent in old age. Reticular dystrophy of the retinal pigment epithelium is sometimes associated with scleral staphyloma, choroidal neovascularization, convergent strabismus, spherophakia with myopia and luxated lenses, and partial atrophy of the iris.","definition_xrefs":["Orphanet:99002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned dystrophy of the retinal pigment epithelium","termid":"MONDO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"reticular dystrophy of the retinal pigment epithelium","secondary_identifiers":["UMLS:C1867332","ICD10CM:H35.5","MEDGEN:356753","OMIM:179840","SCTID:723502001","GARD:16891","icd11.foundation:878593681","MESH:C564844","MESH:C566721"],"synonyms":[{"name":"reticular dystrophy of retinal pigment epithelium","type":"exact"},{"name":"retinal dystrophy, reticular pigmentary, of POSTERIOR POLE","type":"related"}],"termid":"MONDO:0009979","xrefs":{"Monarch":{"xref_id":"0009979"}}}


id: MONDO:0011357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eccrine syringofibroadenomatosis with eyelid abnormalities","secondary_identifiers":["UMLS:C1863618","OMIM:603669","MESH:C566347","MEDGEN:355022"],"synonyms":[{"name":"eccrine syringofibroadenomatosis with eyelid abnormalities","type":"exact"}],"termid":"MONDO:0011357","xrefs":{"Monarch":{"xref_id":"0011357"}}}


id: PBO:0029929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_IMP_binding","termid":"PBO:0029929"}


id: PBO:0053975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1287","termid":"PBO:0053975"}


id: PBO:0000741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family","termid":"PBO:0000741"}


id: PBO:0084070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase involved in initiation of Mitotic Exit Network (MEN); GTP-binding protein of the Ras superfamily; accumulates at daughter spindle pole body and activates MEN kinase cascade; controls actomyosin and septin dynamics during cytokinesis","termid":"PBO:0084070"}


id: PATO:0000902
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000902 chinsurah boro type value (obsolete PATO:0000902)","termid":"PATO:0000902"}


id: GO:1905240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in osteoblast differentiation.","definition_xrefs":["GOC:TermGenie","GOC:rph","GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","PMID:19342382"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:1905240)","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"down-regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"downregulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"inhibition of canonical Wnt signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"inhibition of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"narrow"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:1905240"}


