# terms

id: PBO:0050370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 73","termid":"PBO:0050370"}


id: MONDO:0013971
data:
  {"annotated_genes":["SJAG_03071"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86971],"is_not":false,"summary":null,"term":"MONDO:0013971"}]},"cv_name":"mondo","definition":"Leukoencephalopathy-thalamus and brainstem anomalies-high lactate (LTBL) syndrome is a rare, genetic neurological disorder defined by early-onset of neurologic symptoms, biphasic clinical course, unique MRI features (incl. extensive, symmetrical, deep white matter abnormalities), and increased lactate in body fluids. The severe form is characterized by delayed psychomotor development, seizures, early-onset hypotonia, and persistently increased lactate levels. The mild form usually presents with irritability, psychomotor regression after six months of age, and temporary high lactate levels, with overall clinical improvement from the second year onward.","definition_xrefs":["Orphanet:314051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:763366000","MEDGEN:1645614","GARD:12893","OMIM:614924","DOID:0111493","UMLS:C4706421"],"synonyms":[{"name":"COXPD12","type":"exact"},{"name":"EARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"LTBL","type":"exact"},{"name":"combined oxidative phosphorylation defect type 12","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 12","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in EARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 12","type":"exact"},{"name":"leukoencephalopathy with thalamus and brainstem involvement and high lactate","type":"related"},{"name":"leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome","type":"exact"}],"termid":"MONDO:0013971","terms_by_termid":{"MONDO:0013971":null},"xrefs":{"Monarch":{"xref_id":"0013971"}}}


id: GO:2000780
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000780","terms_by_termid":{"GO:2001033":null}}


id: GO:0070833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with an initial N-methylation with phospho-base phosphoethanolamine, followed by two downstream N-methylations on phosphatidyl-bases, phosphatidyl-N-methylethanolamine and phosphatidyl-N-dimethylethanolamine. The process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via CDP-N-methylethanolamine","termid":"GO:0070833"}


id: GO:0050322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taurine + 2-oxoglutarate = sulfoacetaldehyde + L-glutamate.","definition_xrefs":["RHEA:16353","PMID:16535664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"taurine-2-oxoglutarate transaminase activity","secondary_identifiers":["MetaCyc:RXN-2301","EC:2.6.1.55"],"synonyms":[{"name":"taurine aminotransferase activity","type":"exact"},{"name":"taurine transaminase activity","type":"exact"},{"name":"taurine--alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"taurine--glutamate transaminase activity","type":"related"},{"name":"taurine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0050322"}


id: PBO:0048773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geminin DNA replication inhibitor","termid":"PBO:0048773"}


id: GO:0015196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-tryptophan from one side of a membrane to the other. Tryptophan is 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-tryptophan transmembrane transporter activity","secondary_identifiers":["GO:0005299","Reactome:R-HSA-8870352"],"synonyms":[{"name":"L-tryptophan permease activity","type":"exact"},{"name":"L-tryptophan transporter activity","type":"broad"},{"name":"valine/tyrosine/tryptophan permease activity","type":"narrow"}],"termid":"GO:0015196"}


id: PBO:0034812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Ekc1","termid":"PBO:0034812"}


id: PBO:0070198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 123 pseudogene","termid":"PBO:0070198"}


id: PBO:0046758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOG pseudogene 1","termid":"PBO:0046758"}


id: PBO:0058180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4474","termid":"PBO:0058180"}


id: MOD:00693
data:
  {"annotated_genes":["SJAG_01488","SJAG_04819","SJAG_03009"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80460,80406,80482,80464,80410,80408,80461,80462,80463,80409,80465,80407,80483,80485,80486,80487,80466,80484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00006"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01488":null,"SJAG_03009":null,"SJAG_04819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"glycosylated residue","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"GlycoRes","type":"exact"}],"termid":"MOD:00693","terms_by_termid":{"MOD:00006":null}}


id: PBO:0044080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin pseudogene 2","termid":"PBO:0044080"}


id: PBO:0065998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ralA binding protein 1","termid":"PBO:0065998"}


id: PBO:0059101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 7","termid":"PBO:0059101"}


id: PR:O14177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 2a that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10476:SF4","PRO:DNx","OMA:SCHPO01120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-III complex subunit did4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.01","secondary_identifiers":["UniProtKB:O14177"],"synonyms":[{"name":"Spom972h-CHMP2A","type":"exact"},{"name":"vacuolar protein-sorting-associated protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14177"}


id: PBO:0085725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the initiation of DNA replication; required for proper assembly of replication proteins at the origins of replication; interacts with the DDK-phosphorylated MCM complex and required for the recruitment of Cdc45p; localizes to nuclear foci that become diffuse upon DNA replication stress; homologous to the human Treslin/Ticrr protein","termid":"PBO:0085725"}


id: PBO:0003970
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mental retardation","termid":"PBO:0003970"}


id: PBO:0081348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 157","termid":"PBO:0081348"}


id: SO:0001031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Reverse is an attribute of the feature, where the feature is in the 3' to 5' direction. Again could be applied to primer.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction_attribute","termid":"SO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reverse","termid":"SO:0001031"}


id: MONDO:0005677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rickettsia conorii infectious disease","secondary_identifiers":["EFO:0007179"],"termid":"MONDO:0005677","xrefs":{"Monarch":{"xref_id":"0005677"}}}


id: GO:0045203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mtg_sensu","GOC:dos","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of cell outer membrane (obsolete GO:0045203)","synonyms":[{"name":"integral to cell outer membrane","type":"narrow"},{"name":"integral to external membrane","type":"related"},{"name":"integral to outer membrane","type":"related"}],"termid":"GO:0045203"}


id: GO:0075108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of the host adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host adenylate cyclase activity (obsolete GO:0075108)","synonyms":[{"name":"Negative regulation by symbiont of host 3',5'-cyclic AMP synthetase activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing ; 3',5'-cyclic-AMP-forming) activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing) activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP pyrophosphate-lyase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenyl cyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenylyl cyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenylylcyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host cAMP generating peptide activity","type":"related"}],"termid":"GO:0075108"}


id: GO:0032231
data:
  {"annotated_genes":["SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107367],"is_not":false,"summary":null,"term":"GO:0032231"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of actin filament bundles.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament bundle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin cable assembly","type":"exact"},{"name":"regulation of actin filament bundle formation","type":"related"}],"termid":"GO:0032231","terms_by_termid":{"GO:0032231":null}}


id: PBO:0018212
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARP","termid":"PBO:0018212"}


id: PR:Q09923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YdjG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01759","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase yakc [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.12","secondary_identifiers":["UniProtKB:Q09923"],"synonyms":[{"name":"Spom972h-ydjG","type":"exact"}],"termid":"PR:Q09923"}


id: MONDO:0007646
data:
  {"annotated_genes":["SJAG_01231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86428],"is_not":false,"summary":null,"term":"MONDO:0007646"}]},"cv_name":"mondo","definition":"A rare peripheral neuropathy characterized by slowly progressive axonal, motor greater than sensory polyneuropathy combined with neuromytonia (including spontaneous muscular activity at rest (myokymia), impaired muscle relaxation (pseudomyotonia), and contractures of hands and feet) and neuromyotonic or myokymic discharges on needle EMG. It presents with distal lower limb weakness with gait impairment, muscle stiffness, fasciculations and cramps in hands and legs worsened by cold, decreased to absent tendon reflexes, intrinsic hand muscle atrophy and, variably, mild distal sensory impairment.","definition_xrefs":["Orphanet:324442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01231":null},"genotype_count":0,"is_obsolete":false,"name":"Gamstorp-Wohlfart syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1738677442","OMIM:137200","MEDGEN:1814513","SCTID:711406009","UMLS:C5700127","DOID:0050526","GARD:12353"],"synonyms":[{"name":"ARAN-NM","type":"exact"},{"name":"ARCMT2-NM","type":"exact"},{"name":"Gamstorp-Wohlfart syndrome","type":"exact"},{"name":"NMAN","type":"related"},{"name":"autosomal recessive Charcot-Marie-Tooth disease type 2 with neuromyotonia","type":"exact"},{"name":"autosomal recessive axonal neuropathy with neuromyotonia","type":"related"},{"name":"autosomal recessive neuromyotonia and axonal neuropathy","type":"exact"},{"name":"myokymia, myotonia and muscle wasting","type":"exact"},{"name":"myokymia, myotonia, and muscle wasting","type":"related"},{"name":"neuromyotonia and axonal neuropathy, autosomal recessive","type":"related"}],"termid":"MONDO:0007646","terms_by_termid":{"MONDO:0007646":null},"xrefs":{"Monarch":{"xref_id":"0007646"}}}


id: PBO:0009350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP helicase Irc3 (predicted)","termid":"PBO:0009350"}


id: PBO:0071795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p40 pseudogene 1","termid":"PBO:0071795"}


id: GO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a transcription ternary complex, composed of RNA polymerase, template DNA, and an RNA transcript, into its constituent components.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex disassembly","termid":"GO:0001117"},{"relation_name":"part_of","term_name":"DNA-templated transcription termination","termid":"GO:0006353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"transcription ternary complex disassembly","synonyms":[{"name":"transcription protein-DNA-RNA complex disassembly","type":"exact"}],"termid":"GO:0001118"}


id: PBO:0087834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiol oxidase required for oxidative protein folding in the ER; essential for maintaining ER redox balance; feedback regulated via reduction and oxidation of regulatory bonds; reduced Pdi1p activates Ero1p by direct reduction of Ero1p regulatory bonds; depletion of thiol substrates and accumulation of oxidized Pdi1p results in inactivation of Ero1p by both Pdi1p-mediated oxidation and autonomous oxidation of Ero1p regulatory bonds; ero1-1 mutation complemented by human ERO1L","termid":"PBO:0087834"}


id: MONDO:0002146
data:
  {"annotated_genes":["SJAG_04110","SJAG_04950","SJAG_00301","SJAG_03077","SJAG_03051","SJAG_04398","SJAG_02829","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[86094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[86636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[85269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[84979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[86724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[86469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","definition":"A disorder characterized by decreased function of the gonads. Clinical manifestations in both males and females include poor libido, infertility, and osteoporosis. Additional signs in males include erectile dysfunction, muscle atrophy, gynecomastia and increased abdominal fat. In females, additional signs include shrinking of the breasts and loss of, or failure to develop menstruation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal disorder","termid":"MONDO:0002259"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_02829":null,"SJAG_03051":null,"SJAG_03077":null,"SJAG_04110":null,"SJAG_04148":null,"SJAG_04398":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"hypogonadism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D007006","NCIT:C9227","DOID:1924","ICD9:253.4","SCTID:48130008","UMLS:C0020619","MEDGEN:5711"],"synonyms":[{"name":"gonadotropin deficiency","type":"exact"},{"name":"hypogonadotropism","type":"exact"}],"termid":"MONDO:0002146","terms_by_termid":{"MONDO:0008980":null,"MONDO:0009514":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0013689":null,"MONDO:0014497":null,"MONDO:0030736":null,"MONDO:0054850":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0002146"}}}


id: PBO:0002588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-tyrosine ligase (predicted)","termid":"PBO:0002588"}


id: PBO:0065349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked","termid":"PBO:0065349"}


id: GO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural fold is formed. The edges of the neural plate thicken and move up to form a U-shaped structure called the neural groove.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"primary neural tube formation","termid":"GO:0014020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold formation","synonyms":[{"name":"neural groove formation","type":"related"}],"termid":"GO:0001842"}


id: PBO:0082161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenosine kinase; required for the utilization of S-adenosylmethionine (AdoMet); may be involved in recycling adenosine produced through the methyl cycle","termid":"PBO:0082161"}


id: PBO:0034386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_dendrite_location","termid":"PBO:0034386"}


id: PBO:0116623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 1 pseudogene 2","termid":"PBO:0116623"}


id: PBO:0060067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 14","termid":"PBO:0060067"}


id: RO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a biological entity and a phenotype. Here a phenotype is construed broadly as any kind of quality of an organism part, a collection of these qualities, or a change in quality or qualities (e.g. abnormally increased temperature). The subject of this relationship can be an organism (where the organism has the phenotype, i.e. the qualities inhere in parts of this organism), a genomic entity such as a gene or genotype (if modifications of the gene or the genotype causes the phenotype), or a condition such as a disease (such that if the condition inheres in an organism, then the organism has the phenotype).","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_phenotype","termid":"RO:0002200"}


id: MONDO:0700119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal chromosome 18q deletion syndrome is a chromosome abnormality that occurs when there is a missing (deleted) copy of genetic material at the end of the long arm (q) of chromosome 18.","definition_xrefs":["GARD:0010865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 18q deletion syndrome","termid":"MONDO:0011147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal chromosome 18q deletion syndrome","secondary_identifiers":["UMLS:C4329736","MEDGEN:1382173"],"synonyms":[{"name":"distal 18q deletion","type":"exact"},{"name":"distal 18q deletion syndrome","type":"exact"},{"name":"distal 18q-","type":"exact"}],"termid":"MONDO:0700119","xrefs":{"Monarch":{"xref_id":"0700119"}}}


id: GO:0008489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + UDP-alpha-D-galactose = a beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + H+ + UDP.","definition_xrefs":["RHEA:31495","PMID:9593693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity","secondary_identifiers":["EC:2.4.1.274","MetaCyc:RXN-12119","Reactome:R-HSA-9851347"],"synonyms":[{"name":"LacCer synthase activity","type":"exact"},{"name":"UDP-galactose glucosylceramide beta-1,4-galactosyltransferase activity","type":"exact"},{"name":"lactosylceramide synthase activity","type":"exact"}],"termid":"GO:0008489"}


id: PBO:0044290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 65","termid":"PBO:0044290"}


id: GO:0090574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase V promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase V transcription repressor complex","termid":"GO:0090574"}


id: GO:0060981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the formation of new blood vessels in the heart from pre-existing blood vessels.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"angiogenesis involved in coronary vascular morphogenesis","termid":"GO:0060978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in coronary angiogenesis","termid":"GO:0060981"}


id: PR:O14041
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2C4.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized nucleolar protein C2C4.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.08","synonyms":[{"name":"Spom972h-SPAC2C4.08","type":"exact"}],"termid":"PR:O14041"}


id: PBO:0041628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 B","termid":"PBO:0041628"}


id: FYECO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing water only.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"water medium","termid":"FYECO:0000100"}


id: PBO:0067360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 459, pseudogene","termid":"PBO:0067360"}


id: PBO:0044710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10 pseudogene 1","termid":"PBO:0044710"}


id: GO:0055077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables the transport of a solute across a membrane via a gap junction hemi-channel. Two gap junction hemi-channels coupled together form a complete gap junction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wide pore channel activity","termid":"GO:0022829"},{"relation_name":"part_of","term_name":"gap junction channel activity","termid":"GO:0005243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"part_of","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"gap junction hemi-channel activity","synonyms":[{"name":"connexon channel activity","type":"exact"}],"termid":"GO:0055077"}


id: GO:1990462
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94380],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097629"}]},"cv_name":"cellular_component","definition":"Omega-shaped (as in the Greek capital letter) intracellular membrane-bounded organelle enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum. Omegasomes are the first step of the formation of autophagosomes via the phagophore assembly sites.","definition_xrefs":["GOC:autophagy","PMID:18725538","PMID:24591649","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"omegasome","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990462","terms_by_termid":{"GO:0097629":null}}


id: MONDO:0033864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile hypotonia-oculomotor anomalies-hyperkinetic movements-developmental delay syndrome","secondary_identifiers":["UMLS:C4748715","GARD:17962","MEDGEN:1648431","OMIM:618218","Orphanet:522077"],"synonyms":[{"name":"Baker-Gordon syndrome","type":"exact"}],"termid":"MONDO:0033864","xrefs":{"Monarch":{"xref_id":"0033864"}}}


id: PBO:0004339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP assembly factor Naf1 (predicted)","termid":"PBO:0004339"}


id: GO:1900725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving osmoregulated periplasmic glucan.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"osmoregulated periplasmic glucan metabolic process","synonyms":[{"name":"osmoregulated periplasmic glucan metabolism","type":"exact"}],"termid":"GO:1900725"}


id: PBO:0004685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS family protein Rtc3 (predicted)","termid":"PBO:0004685"}


id: MONDO:0006590
data:
  {"annotated_genes":["SJAG_02698","SJAG_03158","SJAG_00104","SJAG_02488","SJAG_01878","SJAG_04565","SJAG_01938","SJAG_05011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[85790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[85503,85504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[84803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"},{"annotations":[86505,86504,86503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"}]},"cv_name":"mondo","definition":"A group of autosomal dominant, autosomal recessive, X-linked inherited or acquired disorders characterized by the thickening of the palms and soles due to hyperkeratosis.","definition_xrefs":["NCIT:C34748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_03158":null,"SJAG_04565":null,"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:706885006","MEDGEN:44017","DOID:3390","ICD9:757.39","UMLS:C0022596","EFO:1000745"],"synonyms":[{"name":"keratoderma, palmoplantar","type":"related"},{"name":"keratosis palmaris et plantaris","type":"exact"},{"name":"palmoplantar keratoderma","type":"exact"}],"termid":"MONDO:0006590","terms_by_termid":{"MONDO:0007858":null,"MONDO:0008416":null,"MONDO:0009440":null,"MONDO:0014131":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0006590"}}}


id: MONDO:0005802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by tapeworms. Most infected individuals do not have symptoms. When symptoms appear, they include diarrhea, abdominal pain, restlessness, and irritability.","definition_xrefs":["NCIT:C84768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hymenolepiasis","secondary_identifiers":["ICD10CM:B71.0","DOID:10074","MedDRA:10020546","EFO:0007317","icd11.foundation:2028864113","ICD9:123.6","MEDGEN:43772","MESH:D006925","Orphanet:401","UMLS:C0020413","SCTID:44917000","GARD:2787"],"synonyms":[{"name":"Hymenolepis infectious disease","type":"exact"},{"name":"Hymenolepsis infection","type":"related"},{"name":"dwarf tapeworm infection","type":"exact"},{"name":"hymenolepiasis","type":"exact"}],"termid":"MONDO:0005802","xrefs":{"Monarch":{"xref_id":"0005802"}}}


id: MONDO:1010830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radial hemimelia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial hemimelia, non-human animal","termid":"MONDO:1010162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial hemimelia, domestic cat","secondary_identifiers":["OMIA:002225-9685"],"termid":"MONDO:1010830","xrefs":{"Monarch":{"xref_id":"1010830"}}}


id: MONDO:0008485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sebocystomatosis is characterized by multiple (100 to 2000) asymptomatic dermal cysts that usually occur on the sternal region, upper back, axillae and proximal parts of the extremities.","definition_xrefs":["Orphanet:841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sebocystomatosis","secondary_identifiers":["GARD:5003","MEDGEN:75476","OMIM:184500","SCTID:109433009","UMLS:C0259771","DOID:0111556"],"synonyms":[{"name":"STEATOCYSTOMA multiplex","type":"related"},{"name":"Steatocystoma multiplex","type":"exact"},{"name":"multiple sebaceous cysts","type":"related"},{"name":"multiplex steatocystoma","type":"related"},{"name":"sebaceous cysts, multiple","type":"related"}],"termid":"MONDO:0008485","xrefs":{"Monarch":{"xref_id":"0008485"}}}


id: PBO:0042349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD83 molecule pseudogene 1","termid":"PBO:0042349"}


id: PBO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAS1 domain protein Mug57","termid":"PBO:0016997"}


id: PBO:0113289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of the Gcn2p kinase activity; important for disaggregation of ordered and disordered protein aggregates; forms a complex with Gcn1p; proposed to stimulate Gcn2p activation by an uncharged tRNA; suppresses frameshifting at stalled ribosomes","termid":"PBO:0113289"}


id: GO:0046428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-dihydroxy-2-naphthoate + an all-trans-polyprenyl diphosphate + H+ = a 2-demethylmenaquinol + CO2 + diphosphate.","definition_xrefs":["RHEA:26478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoate polyprenyltransferase activity","secondary_identifiers":["EC:2.5.1.74","MetaCyc:RXN-11047"],"synonyms":[{"name":"1,4-dihydroxy-2-naphtoate prenyltransferase activity","type":"exact"}],"termid":"GO:0046428"}


id: FYPO:0006067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, does not occur.","definition_xrefs":["PMID:22696680","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished microtubule polymerization","synonyms":[{"name":"abolished microtubule catastrophe","type":"related"},{"name":"abolished microtubule polymerisation","type":"exact"},{"name":"abolished microtubule polymerization","type":"related"},{"name":"abolished microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abolished microtubule polymerization during vegetative growth","type":"exact"},{"name":"abolished microtubule shrinkage","type":"related"},{"name":"microtubule polymerization abolished","type":"exact"}],"termid":"FYPO:0006067"}


id: MONDO:0002775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The absence of ovulation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anovulation","secondary_identifiers":["MESH:D000858","MEDGEN:1951","icd11.foundation:563648258","DOID:3781","UMLS:C0003128"],"termid":"MONDO:0002775","xrefs":{"Monarch":{"xref_id":"0002775"}}}


id: PBO:0004813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase subunit Arg5 (predicted)","termid":"PBO:0004813"}


id: GO:1905953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lipid localization.","definition_xrefs":["PMID:17564681","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of lipid localization","termid":"GO:1905952"},{"relation_name":"negatively_regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid localization","synonyms":[{"name":"down regulation of lipid localisation","type":"exact"},{"name":"down regulation of lipid localization","type":"exact"},{"name":"down-regulation of lipid localisation","type":"exact"},{"name":"down-regulation of lipid localization","type":"exact"},{"name":"downregulation of lipid localisation","type":"exact"},{"name":"downregulation of lipid localization","type":"exact"},{"name":"inhibition of lipid localisation","type":"narrow"},{"name":"inhibition of lipid localization","type":"narrow"},{"name":"negative regulation of lipid localisation","type":"exact"}],"termid":"GO:1905953"}


id: PBO:0075973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STARD13 intronic transcript 1","termid":"PBO:0075973"}


id: PBO:0091478
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 Homology Domain","termid":"PBO:0091478"}


id: PBO:0061041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 2","termid":"PBO:0061041"}


id: PBO:0114296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing protein Dbl1, implicated in DNA repair","termid":"PBO:0114296"}


id: PBO:0000935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic ester hydrolase activity (predicted)","termid":"PBO:0000935"}


id: GO:0051176
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113427,88797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"positively_regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"positive regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of sulfur metabolic process","type":"narrow"},{"name":"positive regulation of sulfur metabolism","type":"exact"},{"name":"positive regulation of sulphur metabolic process","type":"exact"},{"name":"positive regulation of sulphur metabolism","type":"exact"},{"name":"stimulation of sulfur metabolic process","type":"narrow"},{"name":"up regulation of sulfur metabolic process","type":"exact"},{"name":"up-regulation of sulfur metabolic process","type":"exact"},{"name":"upregulation of sulfur metabolic process","type":"exact"}],"termid":"GO:0051176","terms_by_termid":{"GO:0090180":null}}


id: FYPO:0007908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lesser extent than normal when a cell is subject to amino acid starvation.","definition_xrefs":["PMID:34805795","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation during amino acid starvation","termid":"FYPO:0007908"}


id: PBO:0018082
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutants lacking primase activity fail to complement S. cerevisiae MCM10 deletion","termid":"PBO:0018082"}


id: MONDO:0010049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-glaucoma-intellectual disability syndrome is characterized by progressive spastic paraplegia, glaucoma and intellectual deficit. It has been described in two families. The second described sibship was born to consanguineous parents. The mode of inheritance is autosomal recessive.","definition_xrefs":["Orphanet:2818"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia-glaucoma-intellectual disability syndrome","secondary_identifiers":["MEDGEN:376520","UMLS:C1849113","OMIM:270850","GARD:4931","MESH:C564809"],"synonyms":[{"name":"spastic paresis glaucoma intellectual disability","type":"related"},{"name":"spastic paresis glaucoma mental retardation","type":"related"},{"name":"spastic paresis, glaucoma, and intellectual disability","type":"related"},{"name":"spastic paresis, glaucoma, and mental retardation","type":"related"}],"termid":"MONDO:0010049","xrefs":{"Monarch":{"xref_id":"0010049"}}}


id: GO:0048726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the labrum over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labrum development","termid":"GO:0048726"}


id: GO:0050202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(4-hydroxyphenyl)-2-aminoethanol = (4-hydroxyphenyl)acetaldehyde + NH4.","definition_xrefs":["RHEA:18173","EC:4.2.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"octopamine dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03358","MetaCyc:OCTOPAMINE-DEHYDRATASE-RXN"],"synonyms":[{"name":"octopamine hydro-lyase (deaminating)","type":"related"},{"name":"octopamine hydro-lyase [deaminating; (4-hydroxyphenyl)acetaldehyde-forming]","type":"related"},{"name":"octopamine hydrolyase activity","type":"related"}],"termid":"GO:0050202"}


id: MONDO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the male or female reproductive system. Representative examples include benign prostate phyllodes tumor, benign Sertoli cell tumor, uterine corpus leiomyoma, and benign ovarian serous tumor.","definition_xrefs":["NCIT:C7617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"reproductive system neoplasm","termid":"MONDO:0006054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign reproductive system neoplasm","secondary_identifiers":["DOID:0050622","MEDGEN:234034","UMLS:C1332536"],"synonyms":[{"name":"benign reproductive system neoplasm","type":"exact"},{"name":"reproductive organ benign neoplasm","type":"exact"}],"termid":"MONDO:0000383","xrefs":{"Monarch":{"xref_id":"0000383"}}}


id: GO:0070057
data:
  {"annotated_genes":["SJAG_00405","SJAG_04080","SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102669,105049,118271],"is_not":false,"summary":null,"term":"GO:0070057"}]},"cv_name":"cellular_component","definition":"The region of the prospore membrane to which the spindle pole body (SPB) is anchored; the prospore membrane extends from the SPB attachment site to surround the spore nucleus.","definition_xrefs":["PMID:14702385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"prospore membrane","termid":"GO:0005628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_03536":null,"SJAG_04080":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005628"}],"interesting_parent_ids":["GO:0005575","GO:0005628"],"is_obsolete":false,"name":"prospore membrane spindle pole body attachment site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore membrane SPB attachment site","type":"exact"},{"name":"forespore membrane spindle pole body attachment site","type":"exact"},{"name":"prospore membrane SPB attachment site","type":"exact"}],"termid":"GO:0070057","terms_by_termid":{"GO:0070057":null}}


id: PATO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue the bearer's disposition to having an affinity for water; it is readily absorbing or dissolving in water.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophilicity","termid":"PATO:0001886"}


id: FYPO:0001590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"decreased lysine import","termid":"FYPO:0001650"},{"relation_name":"is_a","term_name":"abnormal lysine import during vegetative growth","termid":"FYPO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased lysine import during vegetative growth","synonyms":[{"name":"decreased L-lysine import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased L-lysine import during vegetative growth","type":"exact"},{"name":"decreased lysine import during mitotic cell cycle","type":"related"},{"name":"decreased lysine import into cell during vegetative growth","type":"exact"},{"name":"decreased lysine uptake during vegetative growth","type":"exact"},{"name":"reduced lysine import during vegetative growth","type":"exact"}],"termid":"FYPO:0001590"}


id: GO:0072257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the metanephric nephron tubule as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072257"}


id: GO:0050901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transient adhesive interactions between leukocytes and endothelial cells lining blood vessels. Carbohydrates on circulating leukocytes bind selectins on the vessel wall causing the leukocytes to slow down and roll along the inner surface of the vessel wall. During this rolling motion, transitory bonds are formed and broken between selectins and their ligands. Typically the first step in cellular extravasation (the movement of leukocytes out of the circulatory system, towards the site of tissue damage or infection).","definition_xrefs":["ISBN:0781735149","PMID:14680625","PMID:7507411","PMID:14708592","Wikipedia:Leukocyte_extravasation","PMID:8600538","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"leukocyte tethering or rolling","termid":"GO:0050901"}


id: GO:0061528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aspartate by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"aspartate secretion","termid":"GO:0061528"}


id: MONDO:0015879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic diaphragmatic or thoracic malformation (obsolete MONDO:0015879)","secondary_identifiers":["Orphanet:180776"],"synonyms":[{"name":"isolated diaphragmatic or thoracic malformation","type":"related"},{"name":"nonsyndromic diaphragmatic or thoracic malformation","type":"exact"}],"termid":"MONDO:0015879","xrefs":{"Monarch":{"xref_id":"0015879"}}}


id: PBO:0056209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B4","termid":"PBO:0056209"}


id: PBO:0034404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_development_of","termid":"PBO:0034404"}


id: PBO:0058126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4428","termid":"PBO:0058126"}


id: GO:0071598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is found in the cytoplasm of axons and dendrites, and transports translationally silenced mRNAs to dendritic synapses, where they are released and translated in response to specific exogenous stimuli.","definition_xrefs":["PMID:20368989","GOC:BHF","GOC:go_curators","GOC:mah","PMID:19015237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"},{"relation_name":"part_of","term_name":"neuron projection cytoplasm","termid":"GO:0120111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"neuronal ribonucleoprotein granule","synonyms":[{"name":"neuronal RNA granule","type":"narrow"},{"name":"neuronal RNP granule","type":"exact"}],"termid":"GO:0071598"}


id: PBO:0066690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of microtubule dynamics 1","termid":"PBO:0066690"}


id: PBO:0082434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Broad specificity amino acid permease; high-affinity glutamine permease; major serine permease with minor contributions from paralog Agp1p; role in serine uptake impacts cellular sphingolipid homeostasis; also transports Leu, Thr, Cys, Met and Asn; expression is fully dependent on Grr1p and modulated by the Ssy1p-Ptr3p-Ssy5p (SPS) sensor of extracellular amino acids","termid":"PBO:0082434"}


id: PBO:0052369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 17","termid":"PBO:0052369"}


id: PBO:0030074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_asparagine_import","termid":"PBO:0030074"}


id: PATO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased position","termid":"PATO:0001475"},{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased angle to","termid":"PATO:0002327"}


id: PBO:0053215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 12","termid":"PBO:0053215"}


id: PBO:0054078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1428","termid":"PBO:0054078"}


id: PBO:0040163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte associated metabolic related lncRNA 1","termid":"PBO:0040163"}


id: PBO:0086096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to be associated with the nuclear pore complex; null mutant is viable, displays elevated frequency of mitochondrial genome loss and is sensitive to freeze-thaw stress","termid":"PBO:0086096"}


id: PBO:0005869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide Mi","termid":"PBO:0005869"}


id: GO:0019320
data:
  {"annotated_genes":["SJAG_00027","SJAG_00605","SJAG_02107","SJAG_02135","SJAG_03373","SJAG_03660","SJAG_00839","SJAG_04334","SJAG_04192","SJAG_03818","SJAG_02009","SJAG_02945","SJAG_02950","SJAG_02951","SJAG_02369","SJAG_06621","SJAG_02954","SJAG_02796","SJAG_00461","SJAG_01310","SJAG_04495","SJAG_03828","SJAG_06622","SJAG_03903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105587,94773,105218,103393,109142,109144,109147,109143,116092,105588,109145,109146,109141,97749,77638,94284,98022,103136,105219,105217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[113456,113463,113462,113474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03818":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"hexose catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"hexose breakdown","type":"exact"},{"name":"hexose catabolism","type":"exact"},{"name":"hexose degradation","type":"exact"}],"termid":"GO:0019320","terms_by_termid":{"GO:0033499":null,"GO:0061621":null}}


id: PBO:0088522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd4","termid":"PBO:0088522"}


id: GO:0075266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of oogonium development","termid":"GO:0075264"},{"relation_name":"negatively_regulates","term_name":"oogonium development","termid":"GO:0075263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oogonium development","termid":"GO:0075266"}


id: MONDO:0015412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete median facial cleft (obsolete MONDO:0015412)","secondary_identifiers":["Orphanet:141234"],"synonyms":[{"name":"Midline facial cleft","type":"exact"},{"name":"Tessier number 0-14 and 30 facial cleft","type":"exact"}],"termid":"MONDO:0015412","xrefs":{"Monarch":{"xref_id":"0015412"}}}


id: GO:0006261
data:
  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id: GO:0075134
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host calcium or calmodulin-mediated signal transduction (obsolete GO:0075134)","synonyms":[{"name":"positive regulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075134"}


id: PBO:0070946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 1","termid":"PBO:0070946"}


id: MONDO:0006648
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rapid swelling, increased tension, pain, and ischemic necrosis of the muscles of the anterior tibial compartment of the leg, often following excessive physical exertion.","definition_xrefs":["MESH:D000868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compartment syndrome","termid":"MONDO:0004001"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior compartment of tibia syndrome","secondary_identifiers":["DOID:3933","UMLS:C0003152","SCTID:12694001","MEDGEN:1569"],"synonyms":[{"name":"anterior compartment syndrome","type":"exact"}],"termid":"MONDO:0006648","xrefs":{"Monarch":{"xref_id":"0006648"}}}


id: GO:0018748
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: iprodione + OH- = 3,5-dichlorophenylcarboximide + N-isopropylcarbamate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete iprodione amidohydrolase activity (obsolete GO:0018748)","termid":"GO:0018748"}


id: MOD:00093
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartic acid 1-amide.","definition_xrefs":["PubMed:2542051","RESID:AA0084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid 1-amide","synonyms":[{"name":"(2S)-2-amino-1-butanediamic acid","type":"exact"},{"name":"1-amidated L-aspartic acid","type":"exact"},{"name":"3,4-diamino-4-oxobutanoic acid","type":"exact"},{"name":"3-amino-succinamic acid","type":"exact"},{"name":"AspN","type":"exact"},{"name":"L-aspartic acid 1-amide","type":"exact"},{"name":"MOD_RES Aspartic acid 1-amide","type":"exact"},{"name":"alpha-asparagine","type":"exact"},{"name":"isoasparagine","type":"exact"}],"termid":"MOD:00093"}


id: GO:1904970
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id: MONDO:0006350
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive or invasive transitional cell carcinoma characterized by a papillary growth pattern. It may occur in the bladder or the renal pelvis.","definition_xrefs":["NCIT:C4122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"},{"relation_name":"is_a","term_name":"papillary carcinoma","termid":"MONDO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary transitional cell carcinoma","secondary_identifiers":["MEDGEN:137736","ICDO:8130/3","UMLS:C0334274","DOID:4012","EFO:1000450"],"synonyms":[{"name":"papillary transitional carcinoma","type":"exact"},{"name":"papillary transitional cell carcinoma","type":"exact"},{"name":"papillary transitional cell carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006350","xrefs":{"Monarch":{"xref_id":"0006350"}}}


id: PBO:0046736
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 3'-5' domain containing 2","termid":"PBO:0046736"}


id: PBO:0088536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Gcn20","termid":"PBO:0088536"}


id: PBO:0089847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, protein phosphatase regulatory subunit","termid":"PBO:0089847"}


id: RO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type III bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_III_bouton_to","termid":"RO:0002114"}


id: GO:1901082
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of relaxation of smooth muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of relaxation of muscle","termid":"GO:1901079"},{"relation_name":"is_a","term_name":"regulation of relaxation of smooth muscle","termid":"GO:1901080"},{"relation_name":"positively_regulates","term_name":"relaxation of smooth muscle","termid":"GO:0044557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of relaxation of smooth muscle","synonyms":[{"name":"activation of relaxation of smooth muscle","type":"narrow"},{"name":"activation of smooth muscle relaxation","type":"exact"},{"name":"positive regulation of smooth muscle relaxation","type":"exact"},{"name":"up regulation of relaxation of smooth muscle","type":"exact"},{"name":"up regulation of smooth muscle relaxation","type":"exact"},{"name":"up-regulation of relaxation of smooth muscle","type":"exact"},{"name":"up-regulation of smooth muscle relaxation","type":"exact"},{"name":"upregulation of relaxation of smooth muscle","type":"exact"},{"name":"upregulation of smooth muscle relaxation","type":"exact"}],"termid":"GO:1901082"}


id: GO:0034337
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  {"annotated_genes":["SJAG_00886","SJAG_04266","SJAG_00195"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61028,113566],"is_not":false,"summary":null,"term":"GO:0034337"},{"annotations":[98237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061818"}]},"cv_name":"biological_process","definition":"The process of assisting in the covalent and noncovalent assembly of single or multimeric RNAs into the correct tertiary structure.","definition_xrefs":["GOC:mah","PMID:10393192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00886":null,"SJAG_04266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA folding","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA chaperone","type":"related"}],"termid":"GO:0034337","terms_by_termid":{"GO:0034337":null,"GO:0061818":null}}


id: GO:0140790
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: histone serine phosphate + H2O = histone serine + phosphate, and histone threonine phosphate + H2O = histone threonine + phosphate.","definition_xrefs":["PMID:18614045"],"gene_count":0,"genotype_count":0,"name":"obsolete histone serine/threonine phosphatase activity (obsolete GO:0140790)","termid":"GO:0140790"}


id: GO:2000625
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of miRNA catabolic process","synonyms":[{"name":"regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000625"}


id: PBO:0060672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4 family interacting protein 1 pseudogene 1","termid":"PBO:0060672"}


id: PBO:0029910
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sterol_level","termid":"PBO:0029910"}


id: GO:1902262
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in blood vessel morphogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:16163358","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in blood vessel morphogenesis","synonyms":[{"name":"apoptosis involved in patterning of blood vessels","type":"narrow"},{"name":"apoptotic cell death involved in patterning of blood vessels","type":"exact"},{"name":"apoptotic program involved in patterning of blood vessels","type":"narrow"},{"name":"apoptotic programmed cell death involved in patterning of blood vessels","type":"exact"},{"name":"programmed cell death by apoptosis involved in patterning of blood vessels","type":"exact"},{"name":"signaling (initiator) caspase activity involved in patterning of blood vessels","type":"related"},{"name":"type I programmed cell death involved in patterning of blood vessels","type":"narrow"}],"termid":"GO:1902262"}


id: MONDO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic lesion that affects the vulva and is characterized by thinning or thickening of the skin and dryness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar disease","termid":"MONDO:0002187"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar dystrophy","secondary_identifiers":["DOID:14292","ICD9:624.09","UMLS:C0013426","MEDGEN:3942","ICD9:624.0","NCIT:C34565","SCTID:51689003"],"synonyms":[{"name":"dystrophy of vulva","type":"exact"}],"termid":"MONDO:0001938","xrefs":{"Monarch":{"xref_id":"0001938"}}}


id: PBO:0072322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 8","termid":"PBO:0072322"}


id: PBO:0072823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1","termid":"PBO:0072823"}


id: RO:0008508
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which organism a lays eggs on the outside surface of organism b. Organism b is neither helped nor harmed in the process of egg laying or incubation.","direct_ancestors":[{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_eggs_laid_on_by","termid":"RO:0008508"}


id: PATO:0000361
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000361 gel consistency value (obsolete PATO:0000361)","termid":"PATO:0000361"}


id: MOD:00496
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 125 is merged with entry 199, remap to id: MOD:00552","definition_xrefs":["Unimod:125"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00496 reductive amination-D (obsolete MOD:00496)","termid":"MOD:00496"}


id: MONDO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with dilated cardiomyopathy (obsolete MONDO:0018289)","secondary_identifiers":["Orphanet:371176"],"synonyms":[{"name":"CDG with dilated cardiomyopathy","type":"exact"}],"termid":"MONDO:0018289","xrefs":{"Monarch":{"xref_id":"0018289"}}}


id: PR:Q9HDZ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC589.06c gene.","definition_xrefs":["UniProtKB:Q9HDZ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C589.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.06c","synonyms":[{"name":"Spom972h-SPAC589.06c","type":"exact"}],"termid":"PR:Q9HDZ8"}


id: GO:2001074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric ureteric bud development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"regulates","term_name":"metanephric part of ureteric bud development","termid":"GO:0035502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric ureteric bud development","termid":"GO:2001074"}


id: GO:0015884
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61673],"is_not":false,"summary":null,"term":"GO:0015884"}]},"cv_name":"biological_process","definition":"The directed movement of folic acid (pteroylglutamic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"folic acid transport","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"folate transport","type":"exact"},{"name":"vitamin B9 transport","type":"exact"},{"name":"vitamin M transport","type":"exact"}],"termid":"GO:0015884","terms_by_termid":{"GO:0015884":null}}


id: PR:Q9Y7Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set7 gene.","definition_xrefs":["UniProtKB:Q9Y7Q6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.04c","synonyms":[{"name":"Spom972h-set7","type":"exact"}],"termid":"PR:Q9Y7Q6"}


id: GO:0051307
data:
  {"annotated_genes":["SJAG_03327","SJAG_04457","SJAG_02104","SJAG_01837","SJAG_04259","SJAG_02542","SJAG_00145","SJAG_04126","SJAG_01082","SJAG_01515","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70606],"is_not":false,"summary":null,"term":"GO:0051307"},{"annotations":[106075,114241],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[109933,93644],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"},{"annotations":[116410,75074],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[98450],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[113529],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[94917],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[101093],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"The process in which chromosomes are physically detached from each other during meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome separation","termid":"GO:0051304"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_02104":null,"SJAG_02542":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromosome separation during meiosis","type":"exact"},{"name":"meiotic chromosome resolution","type":"exact"}],"termid":"GO:0051307","terms_by_termid":{"GO:0033316":null,"GO:0051307":null,"GO:0051755":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0039129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent in melanoma 2","termid":"PBO:0039129"}


id: MONDO:0018506
data:
  {"annotated_genes":["SJAG_00260","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86578,86579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"mesenchymal tumor of small intestine","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843104","Orphanet:423798","GARD:21761","UMLS:C5680077"],"synonyms":[{"name":"mesenchymal tumor of small bowel","type":"exact"},{"name":"mesenchymal tumour of small bowel","type":"exact"}],"termid":"MONDO:0018506","terms_by_termid":{"MONDO:0011719":null},"xrefs":{"Monarch":{"xref_id":"0018506"}}}


id: GO:0003913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA.","definition_xrefs":["GOC:mah","PMID:11124949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA photolyase activity","termid":"GO:0003913"}


id: PBO:0072268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 6","termid":"PBO:0072268"}


id: MONDO:0019733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial visceral amyloidosis","termid":"MONDO:0007099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"AFib amyloidosis","secondary_identifiers":["Orphanet:93562","GARD:19226","icd11.foundation:141110588","MEDGEN:1826152","UMLS:C5680267"],"synonyms":[{"name":"familial amyloid nephropathy due to fibrinogen A alpha-chain variant","type":"exact"},{"name":"fibrinogen A alpha-chain amyloidosis","type":"exact"},{"name":"hereditary amyloid nephropathy due to fibrinogen A alpha-chain variant","type":"exact"},{"name":"hereditary renal amyloidosis due to fibrinogen A alpha-chain variant","type":"exact"}],"termid":"MONDO:0019733","xrefs":{"Monarch":{"xref_id":"0019733"}}}


id: PBO:0063752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 17","termid":"PBO:0063752"}


id: MONDO:0011126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute insulin response","secondary_identifiers":["MEDGEN:355729","UMLS:C1866503","OMIM:601676"],"synonyms":[{"name":"AIR","type":"exact"},{"name":"acute insulin response","type":"exact"}],"termid":"MONDO:0011126","xrefs":{"Monarch":{"xref_id":"0011126"}}}


id: FYPO:0007990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize isoleucine, and therefore requires isoleucine in the medium for vegetative cell growth.","definition_xrefs":["PMID:35325114","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for isoleucine","synonyms":[{"name":"growth auxotrophic for isoleucine during mitotic cell cycle","type":"exact"},{"name":"growth auxotrophic for isoleucine during vegetative growth","type":"exact"},{"name":"isoleucine auxotrophy","type":"exact"}],"termid":"FYPO:0007990"}


id: MONDO:0002682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that involves a brain ventricle. It may be a primary neoplasm arising from a brain ventricle, a metastasis from a distant anatomic site, or an extension of an invasive neoplasm from an adjacent brain structure.","definition_xrefs":["NCIT:C2937"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cerebral ventricle cancer","secondary_identifiers":["MEDGEN:3325","MESH:D002551","ICD9:191.5","SCTID:126958000","DOID:3541","UMLS:C0007798"],"synonyms":[{"name":"brain neoplasms, intraventricular","type":"exact"},{"name":"brain ventricle cancer","type":"exact"},{"name":"cancer of brain ventricle","type":"exact"},{"name":"cerebral ventricle neoplasm","type":"exact"},{"name":"intraventricular brain neoplasm","type":"exact"},{"name":"intraventricular brain neoplasms","type":"exact"},{"name":"intraventricular brain tumor","type":"exact"},{"name":"intraventricular brain tumour","type":"exact"},{"name":"intraventricular neoplasm of brain","type":"exact"},{"name":"intraventricular neoplasm of the brain","type":"exact"},{"name":"intraventricular neoplasms","type":"exact"},{"name":"intraventricular tumor of brain","type":"exact"},{"name":"intraventricular tumor of the brain","type":"exact"},{"name":"intraventricular tumour of brain","type":"exact"},{"name":"intraventricular tumour of the brain","type":"exact"},{"name":"malignant brain ventricle neoplasm","type":"exact"},{"name":"malignant neoplasm of brain ventricle","type":"exact"}],"termid":"MONDO:0002682","xrefs":{"Monarch":{"xref_id":"0002682"}}}


id: PR:O60148
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18H10.18c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C18H10.18c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.18c","synonyms":[{"name":"Spom972h-SPBC18H10.18c","type":"exact"}],"termid":"PR:O60148"}


id: GO:0045173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of O-sialoglycoproteins, glycoproteins which contain sialic acid as one of their carbohydrates. They are often found on or in the cell or tissue membranes and participate in a variety of biological activities.","definition_xrefs":["PMID:8824323","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"O-sialoglycoprotein catabolic process","synonyms":[{"name":"O-sialoglycoprotein breakdown","type":"exact"},{"name":"O-sialoglycoprotein catabolism","type":"exact"},{"name":"O-sialoglycoprotein degradation","type":"exact"}],"termid":"GO:0045173"}


id: MONDO:0009065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cystinosis, nephropathic (obsolete MONDO:0009065)","termid":"MONDO:0009065","xrefs":{"Monarch":{"xref_id":"0009065"}}}


id: GO:0071505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycophenolic acid stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mycophenolic acid","synonyms":[{"name":"response to mycophenolate","type":"exact"}],"termid":"GO:0071505"}


id: PBO:0070361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 37","termid":"PBO:0070361"}


id: MONDO:0044001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing loss characterized by a combination of conductive and sensorineural hearing loss. It is caused by problems in both the inner ear and middle or outer ear.","definition_xrefs":["NCIT:C26974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing loss, mixed conductive-sensorineural","secondary_identifiers":["MEDGEN:102336","SCTID:77507001","MESH:D046089","UMLS:C0155552"],"synonyms":[{"name":"Losses, mixed hearing","type":"related"},{"name":"hearing loss, mixed","type":"related"},{"name":"hearing loss, mixed conductive sensorineural","type":"related"},{"name":"loss, mixed hearing","type":"related"},{"name":"mixed conductive and sensorineural deafness","type":"exact"},{"name":"mixed conductive and sensorineural hearing loss","type":"exact"},{"name":"mixed deafness","type":"related"},{"name":"mixed hearing loss","type":"exact"},{"name":"mixed type deafness","type":"related"}],"termid":"MONDO:0044001","xrefs":{"Monarch":{"xref_id":"0044001"}}}


id: MONDO:0700033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 13 in which the presence of an extra copy of chromosome 13 is present in all the cells of the organism.","definition_xrefs":["doi:10.1186/1753-6561-9-S1-A51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisomy 13","termid":"MONDO:0018068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"complete trisomy 13","termid":"MONDO:0700033","xrefs":{"Monarch":{"xref_id":"0700033"}}}


id: GO:0030836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of protein depolymerization","termid":"GO:1901881"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"positive regulation of actin filament depolymerization","secondary_identifiers":["GO:0030045"],"synonyms":[{"name":"actin filament destabilization","type":"exact"},{"name":"activation of actin filament depolymerization","type":"narrow"},{"name":"positive regulation of actin depolymerization","type":"exact"},{"name":"positive regulation of actin polymerization and/or depolymerization","type":"broad"},{"name":"stimulation of actin filament depolymerization","type":"narrow"},{"name":"up regulation of actin filament depolymerization","type":"exact"},{"name":"up-regulation of actin filament depolymerization","type":"exact"},{"name":"upregulation of actin filament depolymerization","type":"exact"}],"termid":"GO:0030836"}


id: MONDO:0013316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Occult macular dystrophy is a rare, genetic retinal dystrophy disease characterized by bilateral progressive decline of visual acuity, due to retinal dysfunction confined only to the macula, associated with normal fundus and fluorescein angiograms and severely attenuated focal macular and multifocal electroretinograms.","definition_xrefs":["Orphanet:247834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"occult macular dystrophy","secondary_identifiers":["NANDO:1200934","icd11.foundation:863463706","ICD10CM:H35.5","MEDGEN:462183","DOID:0050578","UMLS:C3150833","GARD:17200","OMIM:613587"],"synonyms":[{"name":"OCMD","type":"exact"},{"name":"OMD","type":"exact"},{"name":"Omd","type":"related"},{"name":"occult macular dystrophy","type":"exact"}],"termid":"MONDO:0013316","xrefs":{"Monarch":{"xref_id":"0013316"}}}


id: GO:0099551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the vesicular release and reception of neuropeptide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by neuropeptide","termid":"GO:0099540"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099551"}


id: MONDO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fungal infections caused by trichosporon that may become systemic especially in an immunocompromised host. Clinical manifestations range from superficial cutaneous infections to systemic lesions in multiple organs.","definition_xrefs":["MESH:D060586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic systemic mycosis","termid":"MONDO:0045033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichosporonosis","secondary_identifiers":["SCTID:240761008","UMLS:C0343939","DOID:0050290","MEDGEN:452453"],"synonyms":[{"name":"Trichosporon caused disease or disorder","type":"exact"},{"name":"Trichosporon disease or disorder","type":"exact"},{"name":"Trichosporon infectious disease","type":"exact"}],"termid":"MONDO:0000306","xrefs":{"Monarch":{"xref_id":"0000306"}}}


id: MONDO:0006504
data:
  {"annotated_genes":["SJAG_00846","SJAG_04881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[85734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"An instance of metabolic disease that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_04881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"acquired metabolic disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060158","EFO:1000639"],"synonyms":[{"name":"acquired metabolic disease","type":"exact"}],"termid":"MONDO:0006504","terms_by_termid":{"MONDO:0010438":null,"MONDO:0014166":null},"xrefs":{"Monarch":{"xref_id":"0006504"}}}


id: PATO:0001008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001008 absolute latency value (obsolete PATO:0001008)","termid":"PATO:0001008"}


id: PBO:0077634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and ubiquitin like domain containing 2","termid":"PBO:0077634"}


id: PBO:0046889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 13 member A","termid":"PBO:0046889"}


id: GO:0051312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration of chromosome structure from the condensed form to a relaxed disperse form.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome decondensation (obsolete GO:0051312)","termid":"GO:0051312"}


id: PBO:0086014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP fusion protein localizes to endoplasmic reticulum (ER) while mCherry fusion localizes to both ER and vacuole","termid":"PBO:0086014"}


id: GO:0150023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic tree are generated on the apical neuron side and organized into dendritic branches.","definition_xrefs":["PMID:22683681","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite arborization","termid":"GO:0140059"},{"relation_name":"is_a","term_name":"apical dendrite morphogenesis","termid":"GO:0150021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical dendrite arborization","termid":"GO:0150023"}


id: MONDO:1011992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital keratoconjunctivitis sicca and ichthyosiform dermatosis, non-human animal","secondary_identifiers":["OMIA:001683"],"termid":"MONDO:1011992","xrefs":{"Monarch":{"xref_id":"1011992"}}}


id: PR:000050529
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf1 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been monomethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00085.","definition_xrefs":["PomBase:VW","PMID:22150589","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf1/Me1(K20)","pombase_gene_id":"SPAC1834.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00085","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf1 gene translation product, initiator methionine removed monomethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf1/InitMet-/Me1:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00085","type":"broad"},{"name":"hhf1/Me1(K20)","type":"exact"},{"name":"histone H4 K20me1 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf1 K20me1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050529"}


id: MONDO:0025271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection in cattle caused by various species of trypanosomes.","definition_xrefs":["MESH:D014354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"trypanosomiasis, non-human animal","termid":"MONDO:0700213"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trypanosomiasis, bovine","synonyms":[{"name":"Trypanosomiases, bovine","type":"related"},{"name":"bovine Trypanosomiases","type":"related"},{"name":"bovine trypanosomiasis","type":"related"}],"termid":"MONDO:0025271","xrefs":{"Monarch":{"xref_id":"0025271"}}}


id: GO:0051332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S phase","termid":"GO:0051320"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051328"}],"interesting_parent_ids":["GO:0051328","GO:0008150"],"is_obsolete":false,"name":"meiotic S phase","synonyms":[{"name":"S phase of meiotic cell cycle","type":"exact"},{"name":"S-phase of meiotic cell cycle","type":"exact"},{"name":"premeiotic S-phase","type":"exact"}],"termid":"GO:0051332"}


id: PBO:0079880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 1B","termid":"PBO:0079880"}


id: GO:0008929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerone phosphate = methylglyoxal + phosphate.","definition_xrefs":["EC:4.2.3.3","RHEA:17937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylglyoxal synthase activity","secondary_identifiers":["KEGG_REACTION:R01016","MetaCyc:METHGLYSYN-RXN"],"synonyms":[{"name":"glycerone-phosphate phospho-lyase (methylglyoxal-forming)","type":"related"},{"name":"glycerone-phosphate phospho-lyase activity","type":"related"},{"name":"methylglyoxal synthetase activity","type":"related"}],"termid":"GO:0008929"}


id: PBO:0071422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 28","termid":"PBO:0071422"}


id: GO:0047169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-CoA + galactarate = 2-(E)-O-feruloyl-D-galactarate + CoA.","definition_xrefs":["EC:2.3.1.130","RHEA:12997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"galactarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03727","MetaCyc:2.3.1.130-RXN"],"synonyms":[{"name":"feruloyl-CoA:galactarate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"galacturate hydroxycinnamoyltransferase activity","type":"related"}],"termid":"GO:0047169"}


id: MONDO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic bone disease that results from either a deficiency in vitamin D, or an abnormality in the metabolism of vitamin D, or a deficiency of calcium in the diet. The most common symptoms are bone pain and muscle weakness. When it occurs in children it is commonly referred to as rickets. (Diagnostic Surgical Pathology, 3rd ed.) --2003","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone remodeling disease","termid":"MONDO:0000833"},{"relation_name":"is_a","term_name":"metabolic bone disorder","termid":"MONDO:0800486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteomalacia","secondary_identifiers":["DOID:10573","MEDGEN:14533","NCIT:C26838","MESH:D010018","ICD9:268.2","HP:0002749","UMLS:C0029442","SCTID:4598005"],"synonyms":[{"name":"osteomalacia","type":"exact"},{"name":"osteomalacia (disease)","type":"exact"}],"termid":"MONDO:0001068","xrefs":{"Monarch":{"xref_id":"0001068"}}}


id: GO:0035746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granzyme A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"granzyme A production","termid":"GO:0035746"}


id: PBO:0074739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 99","termid":"PBO:0074739"}


id: FYPO:0006417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the cleavage and rejoining of intermediates formed during meiotic recombination is longer than normal. All intermediates or a subset (such as a specific type or configuration of intermediate) may remain present for longer than normal.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of resolution of meiotic recombination intermediates","synonyms":[{"name":"increased duration of joint molecule resolution","type":"exact"},{"name":"persistent meiotic joint molecules","type":"related"},{"name":"prolonged resolution of meiotic recombination intermediates","type":"exact"}],"termid":"FYPO:0006417"}


id: PATO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being free of curves, bends, or angles.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straight","termid":"PATO:0002180"}


id: MOD:00232
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and 5'-phosphoadenosine through a phosphoramide ester bond to form N6-(phospho-5'-adenosine)-L-lysine.","definition_xrefs":["PubMed:3882425","PubMed:4944632","Unimod:405#K","DeltaMass:316","RESID:AA0227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(phospho-5'-adenosine)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(5'-adenosine phosphonamino)hexanoic acid","type":"exact"},{"name":"5'-adenylic-N6-L-lysine","type":"exact"},{"name":"ACT_SITE N6-AMP-lysine intermediate","type":"exact"},{"name":"AMP Lysyl","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"L-lysine monoanhydride with 5'-adenylic acid","type":"exact"},{"name":"N(zeta)-5'-adenylic-L-lysine","type":"exact"},{"name":"N6-(phospho-5'-adenosine)-L-lysine","type":"exact"},{"name":"N6-L-lysine 5'-adenosine phosphoramidester","type":"exact"},{"name":"N6AMPLys","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"epsilon-5'-adenylic-L-lysine","type":"exact"}],"termid":"MOD:00232"}


id: PBO:0063643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1","termid":"PBO:0063643"}


id: GO:0035260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the internal genitalia are generated and organized. The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals.","definition_xrefs":["PMID:24793987","PMID:25247640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal genitalia morphogenesis","termid":"GO:0035260"}


id: MONDO:0016337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","secondary_identifiers":["Orphanet:217619"],"termid":"MONDO:0016337","xrefs":{"Monarch":{"xref_id":"0016337"}}}


id: MONDO:0014267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency due to IKK2 deficiency is a rare, genetic form of primary immunodeficiency characterized by life-threatening bacterial, fungal and viral infections with the onset in infancy, and failure to thrive. Typically, hypogammaglobulinemia or agammaglobulinemia and normal levels of T and B cells are present.","definition_xrefs":["Orphanet:397787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T+ B+ severe combined immunodeficiency","termid":"MONDO:0044201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency due to IKK2 deficiency","secondary_identifiers":["GARD:17641","MEDGEN:1648569","OMIM:615592","UMLS:C4747743","DOID:0111959"],"synonyms":[{"name":"IMD15","type":"related"},{"name":"SCID due to IKK2 deficiency","type":"exact"},{"name":"immunodeficiency 15","type":"related"},{"name":"immunodeficiency 15B","type":"exact"},{"name":"immunodeficiency type 15","type":"exact"}],"termid":"MONDO:0014267","xrefs":{"Monarch":{"xref_id":"0014267"}}}


id: PBO:0085128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein implicated in ribosome biogenesis; deletion extends chronological lifespan","termid":"PBO:0085128"}


id: PBO:0074260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO4A1 antisense RNA 1","termid":"PBO:0074260"}


id: PBO:0027115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_shmoo_tip","termid":"PBO:0027115"}


id: FYPO:0007940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is normal (i.e. indistinguishable from wild type). Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal chromatin organization","termid":"FYPO:0007940"}


id: PBO:0079461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 1","termid":"PBO:0079461"}


id: MONDO:0022409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nephropathy-associated ciliopathy (obsolete MONDO:0022409)","secondary_identifiers":["Orphanet:156162"],"termid":"MONDO:0022409","xrefs":{"Monarch":{"xref_id":"0022409"}}}


id: PBO:0031235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_horsetail_movement","termid":"PBO:0031235"}


id: GO:0050511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate + UDP-N-acetyl-alpha-D-glucosamine = beta-D-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamm-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate + H+ + UDP.","definition_xrefs":["RHEA:23192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8976"],"synonyms":[{"name":"MurG transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:N-acetyl-alpha-D-muramyl(oyl-L-Ala- gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol beta-1,4-N-acetylglucosaminlytransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase activity","type":"related"},{"name":"undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase activity","type":"related"},{"name":"undecaprenyldiphospho-muramoylpentapeptide b-N-acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0050511"}


id: PBO:0072341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 27","termid":"PBO:0072341"}


id: GO:0071516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initial formation of a stable single-strand DNA lesion that triggers programmed gene conversion at the mating-type locus, thereby restricting mating-type interconversion to one of the two sister chromatids during DNA replication.","definition_xrefs":["GOC:mah","PMID:18723894"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of imprinting at mating-type locus (obsolete GO:0071516)","synonyms":[{"name":"mating type determination, establishment of imprinting","type":"exact"}],"termid":"GO:0071516"}


id: PBO:0047345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 2 pseudogene 1","termid":"PBO:0047345"}


id: GO:0002605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"negatively_regulates","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic cell antigen processing and presentation","synonyms":[{"name":"down regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"down-regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"downregulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"inhibition of dendritic cell antigen processing and presentation","type":"narrow"}],"termid":"GO:0002605"}


id: MONDO:0010467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xq27.3q28 duplication syndrome is a recently described syndrome characterized by short stature, hypogonadism, developmental delay and facial dysmorphism.","definition_xrefs":["Orphanet:261483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome X","termid":"MONDO:0017010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xq27.3q28 duplication syndrome","secondary_identifiers":["OMIM:300869","MEDGEN:477152","GARD:17247","UMLS:C3275521"],"synonyms":[{"name":"Xq27.3-q28 microduplication syndrome","type":"exact"},{"name":"chromosome Xq27.3-q28 DUPLICATION syndrome","type":"related"},{"name":"chromosome xq27.3-q28 duplication syndrome, X-linked recessive","type":"exact"},{"name":"dup(X)(q27.3q28)","type":"exact"},{"name":"trisomy Xq27.3-q28","type":"exact"},{"name":"trisomy Xq27.3q28","type":"exact"}],"termid":"MONDO:0010467","xrefs":{"Monarch":{"xref_id":"0010467"}}}


id: FYPO:0000907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion inheritance is abolished, resulting in the formation of a daughter cell that lacks mitochondria.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance during vegetative growth","termid":"FYPO:0000906"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitochondrion inheritance during vegetative growth","synonyms":[{"name":"abolished mitochondrion inheritance during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial inheritance during vegetative growth","type":"related"},{"name":"mitochondrion inheritance abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000907"}


id: FYECO:0000081
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119268],"is_not":false,"summary":null,"term":"FYECO:0000081"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract and other components. The concentration of glucose is very low (eg around 0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"is_obsolete":false,"name":"low glucose YES","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"low glucose YE","type":"related"},{"name":"low glucose rich medium","type":"related"}],"termid":"FYECO:0000081","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000081":null}}


id: PBO:0034316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sequentially_related_to","termid":"PBO:0034316"}


id: PBO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBPL divergent transcript","termid":"PBO:0061603"}


id: GO:1905405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic cohesin loading.","definition_xrefs":["GOC:TermGenie","PMID:26687354","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic cohesin loading (obsolete GO:1905405)","termid":"GO:1905405"}


id: PBO:0078991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 1-1","termid":"PBO:0078991"}


id: PBO:0053737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 960","termid":"PBO:0053737"}


id: PBO:0092009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Methionine (cau), mitochondrial","termid":"PBO:0092009"}


id: PBO:0047115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 162 member B","termid":"PBO:0047115"}


id: MONDO:0031447
data:
  {"annotated_genes":["SJAG_02509","SJAG_04003","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800047"},{"annotations":[86726,86727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030827"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"macrothrombocytopenia, isolated","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:613112"],"termid":"MONDO:0031447","terms_by_termid":{"MONDO:0030827":null,"MONDO:0800047":null},"xrefs":{"Monarch":{"xref_id":"0031447"}}}


id: PBO:0057107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 197","termid":"PBO:0057107"}


id: GO:1990100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing homohexameric DNA helicase DnaB, and the DNA helicase loader DnaC. The helicase loader DnaC delivers DnaB to the chromosomal origin (oriC).","definition_xrefs":["PMID:20129058","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"DnaB-DnaC complex","synonyms":[{"name":"DnaB6-DnaC3 complex","type":"narrow"},{"name":"DnaB6-DnaC6 complex","type":"narrow"},{"name":"helicase-loading complex","type":"broad"}],"termid":"GO:1990100"}


id: PBO:0050877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate delta isomerase 1","termid":"PBO:0050877"}


id: GO:0033483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of an internal steady state of a gas within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete gas homeostasis (obsolete GO:0033483)","termid":"GO:0033483"}


id: PBO:0090077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic aspartate aminotransferase Caa1","termid":"PBO:0090077"}


id: PBO:0004502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp102","termid":"PBO:0004502"}


id: GO:0045326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-3'-DNA)-L-tyrosine.","definition_xrefs":["RESID:AA0323"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via the 3'-end to peptidyl-tyrosine (obsolete GO:0045326)","synonyms":[{"name":"DNA-protein covalent cross-linking via the 3'-end to peptidyl-tyrosine","type":"exact"}],"termid":"GO:0045326"}


id: PBO:0061342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1","termid":"PBO:0061342"}


id: GO:0046401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the core region of bacterial lipopolysaccharides, which contains ten saccharide residues. The structure of this core oligosaccharide appears to be similar in closely related bacterial strains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"part_of","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipopolysaccharide core region metabolic process","synonyms":[{"name":"LPS core region metabolic process","type":"exact"},{"name":"lipopolysaccharide core region metabolism","type":"exact"}],"termid":"GO:0046401"}


id: FYPO:0004642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein farnesyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal protein farnesyltransferase activity","termid":"FYPO:0004642"}


id: MONDO:0032775
data:
  {"annotated_genes":["SJAG_04130"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86943],"is_not":false,"summary":null,"term":"MONDO:0032775"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04130":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures and speech and walking impairment","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618480","UMLS:C5193119","MEDGEN:1672912"],"synonyms":[{"name":"NEDSSWI","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH SEIZURES AND SPEECH AND WALKING IMPAIRMENT","type":"related"},{"name":"deoxyhypusine synthase disorder","type":"exact"}],"termid":"MONDO:0032775","terms_by_termid":{"MONDO:0032775":null},"xrefs":{"Monarch":{"xref_id":"0032775"}}}


id: MONDO:0030930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without early-onset generalized epilepsy","secondary_identifiers":["OMIM:619157","GARD:18539","MEDGEN:1737097","UMLS:C5436914"],"synonyms":[{"name":"NEDEGE","type":"exact"}],"termid":"MONDO:0030930","xrefs":{"Monarch":{"xref_id":"0030930"}}}


id: PBO:0046324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 2","termid":"PBO:0046324"}


id: MONDO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wolfram syndrome (WS) also known as DIDMOAD, is a neurodegenerative disorder characterized by type I diabetes mellitus (DM), diabetes insipidus (DI), sensorineural deafness (D), bilateral optical atrophy (OA) and neurological signs. Other related problems are urinary tract atony, ataxia, peripheral neuropathy, psychiatric disorders and/or seizures. 2 types of WS may be distinguished: type 1 and type 2 (WS1 and WS2).","definition_xrefs":["Orphanet:3463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolfram syndrome","secondary_identifiers":["NANDO:1200757","DOID:10632","MESH:D014929","ICD9:250.80","NCIT:C35133","icd11.foundation:151381747","GARD:7898","SCTID:70694009","MEDGEN:21923","UMLS:C0043207"],"synonyms":[{"name":"DIDMOAD","type":"exact"},{"name":"DIDMOAD syndrome","type":"exact"},{"name":"WFS","type":"exact"},{"name":"Wolfram syndrome","type":"exact"},{"name":"diabetes insipidus, diabetes mellitus, optic atrophy, and deafness syndrome","type":"exact"},{"name":"diabetes insipidus-diabetes mellitus-optic atrophy-deafness syndrome","type":"exact"},{"name":"diabetes mellitus and insipidus with optic atrophy and deafness","type":"exact"}],"termid":"MONDO:0018105","xrefs":{"Monarch":{"xref_id":"0018105"}}}


id: GO:0060271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:BHF","GOC:pr","GOC:cilia","PMID:13978319","ISBN:0198506732","PMID:27350441","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium organization","termid":"GO:0044782"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cilium assembly","secondary_identifiers":["GO:0042384","Reactome:R-HSA-5617833"],"synonyms":[{"name":"ciliogenesis","type":"exact"},{"name":"cilium biogenesis","type":"related"},{"name":"cilium formation","type":"exact"},{"name":"cilium morphogenesis","type":"related"},{"name":"cilium organization","type":"related"},{"name":"microtubule-based flagellum assembly","type":"exact"}],"termid":"GO:0060271"}


id: GO:0071224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptidoglycan","termid":"GO:0032494"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptidoglycan","termid":"GO:0071224"}


id: GO:0030899
data:
  {"annotated_genes":["SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117626],"is_not":false,"summary":null,"term":"GO:0030899"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. This reaction requires the presence of calcium ion (Ca2+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"calcium-dependent ATPase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030899","terms_by_termid":{"GO:0030899":null}}


id: PBO:0057184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 339","termid":"PBO:0057184"}


id: PBO:0049884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 3","termid":"PBO:0049884"}


id: GO:0014013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gliogenesis","termid":"GO:0014013"}


id: MONDO:0009382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperbilirubinemia","termid":"MONDO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperbilirubinemia, shunt, primary","secondary_identifiers":["MEDGEN:763312","UMLS:C3550398","OMIM:237800"],"synonyms":[{"name":"PSHB","type":"exact"},{"name":"hyperbilirubinemia, shunt, primary","type":"exact"}],"termid":"MONDO:0009382","xrefs":{"Monarch":{"xref_id":"0009382"}}}


id: MONDO:1010434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrial septal defect that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect, non-human animal","termid":"MONDO:1010009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrial septal defect, dog","secondary_identifiers":["OMIA:000089-9615"],"termid":"MONDO:1010434","xrefs":{"Monarch":{"xref_id":"1010434"}}}


id: PBO:0109053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule associated protein 2 like","termid":"PBO:0109053"}


id: PBO:0012038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, involved in ribosomal large subunit biogenesis (predicted)","termid":"PBO:0012038"}


id: MONDO:0021444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the large intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal benign neoplasm","termid":"MONDO:0003062"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of large intestine","secondary_identifiers":["NCIT:C4610","UMLS:C0347272","SCTID:92170008","MEDGEN:91125"],"synonyms":[{"name":"benign colorectal neoplasm","type":"exact"},{"name":"benign colorectal neoplasms","type":"exact"},{"name":"benign colorectal tumor","type":"exact"},{"name":"benign colorectal tumors","type":"exact"},{"name":"benign colorectal tumour","type":"exact"},{"name":"benign colorectal tumours","type":"exact"},{"name":"benign large bowel neoplasm","type":"exact"},{"name":"benign large bowel tumor","type":"exact"},{"name":"benign large bowel tumour","type":"exact"},{"name":"benign large intestine neoplasm","type":"exact"},{"name":"benign large intestine tumor","type":"exact"},{"name":"benign large intestine tumour","type":"exact"},{"name":"benign neoplasm of large bowel","type":"exact"},{"name":"benign neoplasm of the large bowel","type":"exact"},{"name":"benign neoplasm of the large intestine","type":"exact"},{"name":"benign tumor of large bowel","type":"exact"},{"name":"benign tumor of large intestine","type":"exact"},{"name":"benign tumor of the large bowel","type":"exact"},{"name":"benign tumor of the large intestine","type":"exact"},{"name":"benign tumour of large bowel","type":"exact"},{"name":"benign tumour of large intestine","type":"exact"},{"name":"benign tumour of the large bowel","type":"exact"},{"name":"benign tumour of the large intestine","type":"exact"},{"name":"colorectal neoplasms, benign","type":"exact"},{"name":"colorectal tumors, benign","type":"exact"},{"name":"large intestine benign neoplasm","type":"exact"},{"name":"neoplasms, colorectal, benign","type":"exact"},{"name":"tumors, colorectal, benign","type":"exact"}],"termid":"MONDO:0021444","xrefs":{"Monarch":{"xref_id":"0021444"}}}


id: PBO:0042008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 63","termid":"PBO:0042008"}


id: MONDO:0037742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of mesenchymal gynecologic neoplasms. It includes endometrial stromal nodule, endometrioid stromal sarcoma, and undifferentiated sarcoma. Endometrial stromal nodule has been described in the uterine corpus only. Histologically, it is characterized by the lack of infiltration of the surrounding tissues. Endometrioid stromal sarcoma affects the uterine corpus, and rarely, the ovaries, cervix, and vagina. In the uterine corpus it is classified as low grade or high grade endometrial stromal sarcoma. In the remainder of the anatomic sites it is classified as low grade endometrioid stromal sarcoma. Undifferentiated sarcoma was previously also known as high grade endometrial stromal sarcoma. In 2014, high grade endometrial stromal sarcoma was reclassified and is currently considered a distinct and rare neoplasm that affects the uterine corpus only. It appears to have a prognosis that falls between low grade endometrial stromal sarcoma and undifferentiated sarcoma. The latter affects the uterine corpus and rarely the remainder of the anatomic sites.","definition_xrefs":["NCIT:C8384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrioid stromal and related neoplasms","secondary_identifiers":["MEDGEN:925400","UMLS:C4287868"],"synonyms":[{"name":"endometrioid stromal and related neoplasms","type":"exact"},{"name":"endometrioid stromal and related tumors","type":"exact"},{"name":"endometrioid stromal and related tumours","type":"exact"}],"termid":"MONDO:0037742","xrefs":{"Monarch":{"xref_id":"0037742"}}}


id: FYPO:0002547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nicotinamide. Cells stop growing (and may die) at a concentration of nicotinamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to nicotinamide","synonyms":[{"name":"hypersensitive to nicotinamide","type":"exact"},{"name":"sensitive to nicotinamide during mitotic cell cycle","type":"related"},{"name":"sensitive to nicotinamide during vegetative growth","type":"exact"}],"termid":"FYPO:0002547"}


id: MONDO:0005767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe condition resulting from bacteria invading healthy muscle from adjacent traumatized muscle or soft tissue. The infection originates in a wound contaminated with bacteria of the genus clostridium. C. perfringens accounts for the majority of cases (over eighty percent), while C. noyvi, C. septicum, and C. histolyticum cause most of the other cases.","definition_xrefs":["MESH:D005738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"bacterial infectious disease with sepsis","termid":"MONDO:0005229"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"infection due to clostridium perfringens","termid":"MONDO:0023149"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gas gangrene","secondary_identifiers":["DOID:9159","ICD9:040.0","MEDGEN:8959","SCTID:80466000","icd11.foundation:1920227791","UMLS:C0017105","EFO:0007279","ICD10CM:A48.0"],"synonyms":[{"name":"gas bacillus infection","type":"exact"},{"name":"gas gangrene","type":"exact"},{"name":"myonecrosis","type":"exact"}],"termid":"MONDO:0005767","xrefs":{"Monarch":{"xref_id":"0005767"}}}


id: MONDO:0012936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 5","secondary_identifiers":["OMIM:612559","MEDGEN:436452","UMLS:C2675514"],"synonyms":[{"name":"Clls5","type":"related"},{"name":"leukemia, chronic lymphocytic susceptibility to, 5","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 5","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 5","type":"exact"}],"termid":"MONDO:0012936","xrefs":{"Monarch":{"xref_id":"0012936"}}}


id: PBO:0068442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 16, pseudogene","termid":"PBO:0068442"}


id: PBO:0082710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; interacts with Spc110p at the spindle pole body (SPB) inner plaque and with Spc72p at the SPB outer plaque","termid":"PBO:0082710"}


id: MONDO:0015845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine cervical aplasia and agenesis","secondary_identifiers":["GARD:20186","UMLS:C5190813","icd11.foundation:1670353767","Orphanet:180145","MEDGEN:1673872"],"termid":"MONDO:0015845","xrefs":{"Monarch":{"xref_id":"0015845"}}}


id: GO:1905848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to oxidopamine.","definition_xrefs":["PMID:23721876","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidopamine","termid":"GO:1905846"},{"relation_name":"positively_regulates","term_name":"cellular response to oxidopamine","termid":"GO:1905842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to oxidopamine","synonyms":[{"name":"activation of cellular response to oxidopamine","type":"narrow"},{"name":"up regulation of cellular response to oxidopamine","type":"exact"},{"name":"up-regulation of cellular response to oxidopamine","type":"exact"},{"name":"upregulation of cellular response to oxidopamine","type":"exact"}],"termid":"GO:1905848"}


id: PBO:0056342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP4K1 antisense RNA 1","termid":"PBO:0056342"}


id: PBO:0002779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S18 (predicted)","termid":"PBO:0002779"}


id: MONDO:1012127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency disease, llama","secondary_identifiers":["OMIA:000550-9844"],"termid":"MONDO:1012127","xrefs":{"Monarch":{"xref_id":"1012127"}}}


id: GO:0140975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of a cellular component of another organism, leading to damage or temporary subversion of that structure. In some cases this can cause malfunctioning of the cells and death of the target organism.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of cellular anatomical structure in another organism","synonyms":[{"name":"disruption of cellular component of another organism","type":"broad"}],"termid":"GO:0140975"}


id: PBO:0031709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitophagy","termid":"PBO:0031709"}


id: PBO:0068427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, ribosomal 45S cluster 2","termid":"PBO:0068427"}


id: GO:0019496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A one-carbon metabolic process in which acetyl-CoA is produced from formaldehyde and carbon dioxide.","definition_xrefs":["ISBN:0387961534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"one-carbon metabolic process","termid":"GO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"serine-isocitrate lyase pathway","termid":"GO:0019496"}


id: GO:0033238
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amine metabolism","type":"exact"},{"name":"regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033238","terms_by_termid":{"GO:0010967":null}}


id: PBO:0089278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L2","termid":"PBO:0089278"}


id: SO:0001359
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxyhydroxymethyl_uridine_methyl_ester is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxyhydroxymethyl_uridine_methyl_ester","secondary_identifiers":["RNAMOD:067"],"synonyms":[{"name":"5-(carboxyhydroxymethyl)uridine methyl ester","type":"exact"},{"name":"five carboxyhydroxymethyl uridine methyl ester","type":"exact"},{"name":"mchm5U","type":"exact"}],"termid":"SO:0001359"}


id: PBO:0071601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 18","termid":"PBO:0071601"}


id: PBO:0026714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_RNA_polymerase_II_promoter_during_vegetative_growth","termid":"PBO:0026714"}


id: PBO:0030689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_M-factor","termid":"PBO:0030689"}


id: GO:0045521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-25 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-25 receptor binding","synonyms":[{"name":"IL-25","type":"narrow"},{"name":"interleukin-25 receptor ligand","type":"narrow"}],"termid":"GO:0045521"}


id: FYPO:0007590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is abnormal.","definition_xrefs":["GO:0000422","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"},{"relation_name":"is_a","term_name":"abnormal autophagy","termid":"FYPO:0008082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitophagy","synonyms":[{"name":"abnormal autophagy of mitochondrion","type":"exact"}],"termid":"FYPO:0007590"}


id: GO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Immune response taking place in the gut-associated lymphoid tissue (GALT). GALT includes Peyer's patches, appendix, and solitary lymph nodules.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response in gut-associated lymphoid tissue","synonyms":[{"name":"immune response in GALT","type":"exact"}],"termid":"GO:0002387"}


id: GO:0021644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the vagus nerve is generated and organized. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"vagus nerve development","termid":"GO:0021564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve morphogenesis","synonyms":[{"name":"CN X morphogenesis","type":"related"}],"termid":"GO:0021644"}


id: PR:Q09918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3105 gene.","definition_xrefs":["UniProtKB:Q09918","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3105 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.06","synonyms":[{"name":"Spom972h-hsp3105","type":"exact"},{"name":"glyoxalase 3 homolog 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09918"}


id: GO:0008396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-oxocholesterol + H+ + NADPH = 7alpha-hydroxycholesterol + NADP+.","definition_xrefs":["RHEA:68740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 7-alpha-hydroxylase activity","termid":"GO:0008387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxysterol 7-alpha-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-192065","Reactome:R-HSA-192178","Reactome:R-HSA-191972","Reactome:R-HSA-5602885"],"synonyms":[{"name":"cytochrome P450 CYP7B1","type":"narrow"}],"termid":"GO:0008396"}


id: PBO:0082709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic60p is also involved in import of intermembrane space (IMS) proteins, probably by positioning Mia40p relative to the TOM complex to receive incoming proteins; ortholog of mammalian mitofilin","termid":"PBO:0082709"}


id: GO:1990922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of hepatic stellate cells, resulting in the expansion of a hepatic stellate cell population. Hepatic stellate cells are found in the perisinusoidal space of the liver, and are capable of multiple roles including storage of retinol, presentation of antigen to T cells (including CD1d-restricted NKT cells), and upon activation, production of extracellular matrix components. This cell type comprises approximately 8-15% of total cells in the liver.","definition_xrefs":["PMID:18466260","PMID:15358192","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell proliferation","synonyms":[{"name":"Ito cell proliferation","type":"exact"},{"name":"hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1990922"}


id: PBO:0047449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIIb","termid":"PBO:0047449"}


id: GO:0120323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one or more ubiquitin groups are added to a lipid.","definition_xrefs":["PMID:34012115","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification by small protein conjugation","termid":"GO:0120322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid ubiquitination","termid":"GO:0120323"}


id: MONDO:0800356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short-rib thoracic dysplasia 7/20 with polydactyly, digenic","secondary_identifiers":["UMLS:C4747658","MEDGEN:1662086"],"synonyms":[{"name":"SRTD7/20","type":"exact"}],"termid":"MONDO:0800356","xrefs":{"Monarch":{"xref_id":"0800356"}}}


id: GO:0106310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate.","definition_xrefs":["RHEA:17989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0016740","GO:0016301","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"protein serine kinase activity","secondary_identifiers":["Reactome:R-HSA-9821967","Reactome:R-HSA-9841265","Reactome:R-HSA-9860792","Reactome:R-HSA-9860808","Reactome:R-HSA-9821982","Reactome:R-HSA-9729330"],"synonyms":[{"name":"protein-serine kinase activity","type":"exact"}],"termid":"GO:0106310"}


id: PBO:0027837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton","termid":"PBO:0027837"}


id: GO:0120237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a terminal acetylenic compound, a compound which contains a terminal alkyne moiety in which a carbon of the carbon-carbon triple bond (aka C#C) moiety is attached to a hydrogen atom.","definition_xrefs":["GOC:krc","DOI:10.1007/978-1-4615-4913-0_3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal acetylenic compound metabolic process","termid":"GO:0120244"},{"relation_name":"is_a","term_name":"acetylenic compound biosynthetic process","termid":"GO:0120247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal acetylenic compound biosynthetic process","synonyms":[{"name":"terminal alkyne substituted compound anabolic process","type":"exact"},{"name":"terminal alkyne substituted compound anabolism","type":"exact"},{"name":"terminal alkyne substituted compound biosynthesis","type":"exact"},{"name":"terminal alkyne substituted compound biosynthetic process","type":"exact"},{"name":"terminal alkyne substituted compound synthesis","type":"exact"}],"termid":"GO:0120237"}


id: MONDO:0012944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tibial aplasia-ectrodactyly syndrome","termid":"MONDO:0018050"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"chromosome 17P13.3, telomeric, duplication syndrome","secondary_identifiers":["OMIM:612576","GARD:15572","UMLS:C2675492","MESH:C567245","MEDGEN:390813"],"synonyms":[{"name":"chromosome 17P13.3, telomeric, duplication syndrome","type":"exact"},{"name":"split-hand/foot malformation with long bone deficiency 3","type":"related"}],"termid":"MONDO:0012944","xrefs":{"Monarch":{"xref_id":"0012944"}}}


id: GO:1904518
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96736],"is_not":false,"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at a cytoplasmic microtubule plus-end.","definition_xrefs":["GO_REF:0000087","PMID:15772152","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule plus-end","termid":"GO:1904825"},{"relation_name":"is_a","term_name":"protein localization to cytoplasmic microtubule","termid":"GO:1905755"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cytoplasmic microtubule plus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in cytoplasmic microtubule plus-end","type":"exact"},{"name":"protein localisation to cytoplasmic microtubule plus-end","type":"exact"},{"name":"protein localization in cytoplasmic microtubule plus-end","type":"exact"}],"termid":"GO:1904518","terms_by_termid":{"GO:1904518":null}}


id: PBO:0071821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 16","termid":"PBO:0071821"}


id: MONDO:1012961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cancer that occurs in dogs due to a somatic mutation in the TP53 gene.","definition_xrefs":["PMID:37414794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, TP53-related, dog","secondary_identifiers":["OMIA:001990-9615"],"termid":"MONDO:1012961","xrefs":{"Monarch":{"xref_id":"1012961"}}}


id: PBO:0046796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor II thrombin receptor like 2","termid":"PBO:0046796"}


id: MONDO:0002562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A broad group of disorders that affect the myelin sheaths that cover the neurons. Myelin sheathes cover neuronal axons in the central and peripheral nervous system and function to increase traveling impulse speeds. Disruption of this sheath impairs neuronal transmission and can result in disorders such as multiple sclerosis and Guillain-Barre syndrome, among others.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"demyelinating disease","secondary_identifiers":["MESH:D003711","UMLS:C0011303","NCIT:C34527","MEDGEN:4189","DOID:3213"],"synonyms":[{"name":"demyelinating disorder","type":"exact"}],"termid":"MONDO:0002562","xrefs":{"Monarch":{"xref_id":"0002562"}}}


id: PBO:0050061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLCS antisense RNA 1","termid":"PBO:0050061"}


id: PBO:0069740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1021, pseudogene","termid":"PBO:0069740"}


id: GO:0003874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroneopterin 3'-triphosphate = 6-pyruvoyl-5,6,7,8-tetrahydropterin + H+ + triphosphate.","definition_xrefs":["EC:4.2.3.12","RHEA:22048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin synthase activity","secondary_identifiers":["MetaCyc:4.2.3.12-RXN","Reactome:R-HSA-1474184","KEGG_REACTION:R04286"],"synonyms":[{"name":"2-amino-4-oxo-6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydroxypteridine triphosphate lyase activity","type":"related"},{"name":"2-amino-4-oxo-6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydroxypteridine triphosphate-lyase (6-pyruvoyl-5,6,7,8-tetrahydropterin-forming)","type":"related"},{"name":"6-pyruvoyl tetrahydrobiopterin synthase activity","type":"related"},{"name":"PTPS activity","type":"related"}],"termid":"GO:0003874"}


id: PBO:0073455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant associated 1, lncRNA","termid":"PBO:0073455"}


id: FYPO:0005469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and eventually lyses.","definition_xrefs":["PomBase:mah","PMID:8978670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, lysed cell","synonyms":[{"name":"inviable after spore germination, undivided lysed cell","type":"exact"},{"name":"inviable following spore germination, without cell division, with cell lysis","type":"exact"},{"name":"inviable germinated spore, without cell division, with cell lysis","type":"exact"},{"name":"lethal after spore germination, without cell division, with cell lysis","type":"exact"}],"termid":"FYPO:0005469"}


id: PBO:0030455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_homocitrate_synthase_activity","termid":"PBO:0030455"}


id: PBO:0027146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_farnesyltranstransferase_activity","termid":"PBO:0027146"}


id: PBO:0026722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_oligomerization","termid":"PBO:0026722"}


id: PBO:0043464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 4 pseudogene 1","termid":"PBO:0043464"}


id: GO:0150058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A G protein-coupled receptor complex that serves as a receptor for amylin polypeptide (AMY) and consists of a calcitonin receptor (CTR/CALCR) and a receptor activity-modifying protein (RAMP) 3. Amylin receptor complex 3 (AMY3) also serves as a receptor for the amyloid-beta complex. Ligand binding to AMY3 results in increased cytosolic calcium ion levels and in activation on multiple intracellular signaling pathways.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:22500019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor complex","termid":"GO:1903440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"amylin receptor complex 3","synonyms":[{"name":"AMY3 complex","type":"exact"}],"termid":"GO:0150058"}


id: PBO:0044181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin delta 1","termid":"PBO:0044181"}


id: GO:0031871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proteinase activated receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"proteinase activated receptor binding","synonyms":[{"name":"proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031871"}


id: PBO:0077577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 2","termid":"PBO:0077577"}


id: GO:0038061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette characterized by the NIK-dependent processing and activation of NF-kappaB. Begins with activation of the NF-kappaB-inducing kinase (NIK), which in turn phosphorylates and activates IkappaB kinase alpha (IKKalpha). IKKalpha phosphorylates the NF-kappa B2 protein (p100) leading to p100 processing and release of an active NF-kappaB (p52). The non-canonical NF-kappaB signaling pathway is generally activated by ligands of the TNF receptor superfamily, including lymphotoxin beta (LTB), CD40, OX40, RANK, TWEAK and B cell-activating factor (BAFF).","definition_xrefs":["PMID:11239468","GOC:bf","GOC:vs","PMID:34659217","GOC:mg2","PMID:15140882","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"non-canonical NF-kappaB signal transduction","secondary_identifiers":["Reactome:R-HSA-5676590"],"synonyms":[{"name":"NF-kappaB cascade","type":"broad"},{"name":"NIK-IKK kinase cascade","type":"exact"},{"name":"NIK-IKK signaling pathway","type":"exact"},{"name":"NIK-IKK-alpha cascade","type":"exact"},{"name":"NIK/NF-kappaB cascade","type":"exact"},{"name":"NIK/NF-kappaB signal transduction","type":"exact"},{"name":"NIK/NF-kappaB signaling","type":"exact"},{"name":"non-canonical NF-KB signaling","type":"exact"},{"name":"noncanonical NF-kappaB signaling","type":"exact"},{"name":"noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"p52-dependent NF-kappaB signaling","type":"narrow"}],"termid":"GO:0038061"}


id: GO:0031976
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any thylakoid within a plastid.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid","termid":"GO:0009579"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid thylakoid","termid":"GO:0031976"}


id: MONDO:0004496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myocarditis is a condition that is characterized by inflammation of the heart muscle (myocardium). Some affected people have no noticeable symptoms of the condition. When present, signs and symptoms may include chest pain, abnormal heartbeat, shortness of breath, fatigue, signs of infection (i.e. fever, headache, sore throat, diarrhea), and leg swelling. Myocarditis can be caused by a variety of factors including infections (viral, bacterial, parasitic, and fungal), allergic reactions to certain medications, and exposure to certain chemicals. It can also be associated with other inflammatory conditions such as lupus, Wegener's granulomatosis, giant cell arteritis and Takayasu's arteritis. Most cases occur sporadically in people with no family history of the condition. Treatment aims to address the underlying cause of the condition. Medications and rarely, a heart transplant may be needed if the heart muscle becomes weak.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"extrinsic cardiomyopathy","termid":"MONDO:0002824"},{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"},{"relation_name":"is_a","term_name":"inflammation of heart layer","termid":"MONDO:0024636"},{"relation_name":"is_a","term_name":"myocardial disorder","termid":"MONDO:0024643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"myocarditis","secondary_identifiers":["SCTID:50920009","UMLS:C0027059","DOID:820","ICD10CM:I40","GARD:7137","ICD9:429.0","EFO:0009609","icd11.foundation:1018829714","MEDGEN:44553","MESH:D009205","NCIT:C34831","NORD:1882"],"synonyms":[{"name":"inflammation of myocardium","type":"exact"},{"name":"myocardial inflammation","type":"exact"},{"name":"myocardial inflammation (finding)","type":"exact"},{"name":"myocardium inflammation","type":"exact"}],"termid":"MONDO:0004496","xrefs":{"Monarch":{"xref_id":"0004496"}}}


id: GO:1900876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nonadec-1-ene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonadec-1-ene metabolic process","synonyms":[{"name":"nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900876"}


id: GO:1903297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hypoxia-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of hypoxia-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of hypoxia-induced apoptosis","type":"related"},{"name":"regulation of hypoxic stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"}],"termid":"GO:1903297"}


id: SO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that results from recombination between attP_site and attB_site, composed of the 5' portion of attP_site and the 3' portion of attB_site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attR_site","synonyms":[{"name":"attPB'","type":"related"},{"name":"attR site","type":"exact"}],"termid":"SO:0000945"}


id: PR:O94521
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1281.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.04","synonyms":[{"name":"PL reductase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PL-red 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1281.04","type":"exact"}],"termid":"PR:O94521"}


id: PBO:0064386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 8","termid":"PBO:0064386"}


id: MONDO:0023607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laurence-Prosser-Rocker syndrome","secondary_identifiers":["UMLS:C2931651","MEDGEN:419133","MESH:C537882"],"synonyms":[{"name":"Hirschsprung's disease associated with congenital heart malformation, broad big toes, and ulnar polydactyly","type":"related"},{"name":"Hirschsprung's disease associated with ulnar polydactyly, polysyndactyly of big toes and ventricular septal defect","type":"related"}],"termid":"MONDO:0023607","xrefs":{"Monarch":{"xref_id":"0023607"}}}


id: PBO:0084888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial threonyl-tRNA synthetase; aminoacylates both the canonical threonine tRNA tT(UGU)Q1 and the unusual threonine tRNA tT(UAG)Q2 in vitro; lacks a typical editing domain, but has pre-transfer editing activity stimulated by the unusual tRNA-Thr","termid":"PBO:0084888"}


id: PBO:0083808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that promotes the first step of splicing; required for the final stages of spliceosome maturation and activation; interacts with Prp2p, which may release Spp2p from the spliceosome following the first cleavage reaction; stimulates Prp2p ATPase activity","termid":"PBO:0083808"}


id: MOD:00894
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified resiues with a mass of 128.058578 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 128.058578 Da","termid":"MOD:00894"}


id: MONDO:0000667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to distinguishing environmental and non-verbal auditory cues including difficulty distinguishing speech from non-speech sounds even though hearing is usually normal.","definition_xrefs":["DOID:0060137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"},{"relation_name":"is_a","term_name":"auditory perceptual disorders","termid":"MONDO:0024422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auditory agnosia","secondary_identifiers":["MEDGEN:68602","UMLS:C0234501"],"termid":"MONDO:0000667","xrefs":{"Monarch":{"xref_id":"0000667"}}}


id: PBO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15 (predicted)","termid":"PBO:0002260"}


id: PBO:0004978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"18S ribosomal RNA","termid":"PBO:0004978"}


id: GO:0042494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a bacterial lipoprotein stimulus is received by a cell and converted into a molecular signal. Bacterial lipoproteins are lipoproteins characterized by the presence of conserved sequence motifs called pathogen-associated molecular patterns (PAMPs).","definition_xrefs":["GOC:jl","PMID:12077222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of molecule of bacterial origin","termid":"GO:0032490"},{"relation_name":"is_a","term_name":"response to bacterial lipoprotein","termid":"GO:0032493"},{"relation_name":"part_of","term_name":"detection of bacterium","termid":"GO:0016045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of bacterial lipoprotein","synonyms":[{"name":"detection of BLP","type":"related"},{"name":"detection of Lpp","type":"related"},{"name":"perception of BLP","type":"related"},{"name":"perception of Lpp","type":"related"},{"name":"perception of bacterial lipoprotein","type":"related"}],"termid":"GO:0042494"}


id: PBO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog","termid":"PBO:0001511"}


id: PR:C6Y4C2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.14","synonyms":[{"name":"Spom972h-spo2","type":"exact"}],"termid":"PR:C6Y4C2"}


id: PBO:0055278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2705","termid":"PBO:0055278"}


id: MONDO:1011341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Omphalitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalitis, non-human animal","termid":"MONDO:1011341","xrefs":{"Monarch":{"xref_id":"1011341"}}}


id: MONDO:0017348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphoepithelial-like carcinoma is a rare, malignant epithelial tumor, composed of undifferentiated epithelial cells with dense lymphoid stroma, mimicking lymphoepithelioma. It often shows association with Epstein-Barr virus infection and can develop in various organs, such as the nasopharynx, stomach, skin, breast and lungs, among others. The presenting symptoms, as well as the radiologic features, are usually nonspecific and depend on the affected site and organ.","definition_xrefs":["Orphanet:289682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated carcinoma","termid":"MONDO:0017344"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoepithelial-like carcinoma","secondary_identifiers":["GARD:21151"],"termid":"MONDO:0017348","xrefs":{"Monarch":{"xref_id":"0017348"}}}


id: GO:0004360
data:
  {"annotated_genes":["SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78107],"is_not":false,"summary":null,"term":"GO:0004360"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate.","definition_xrefs":["RHEA:13237","EC:2.6.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine aminotransferase activity","termid":"GO:0070548"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"glutamine-fructose-6-phosphate transaminase (isomerizing) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00768","MetaCyc:L-GLN-FRUCT-6-P-AMINOTRANS-RXN","Reactome:R-HSA-4085027","Reactome:R-HSA-449715"],"synonyms":[{"name":"D-fructose-6-phosphate amidotransferase activity","type":"related"},{"name":"GlcN6P synthase activity","type":"related"},{"name":"L-glutamine-D-fructose-6-phosphate amidotransferase activity","type":"related"},{"name":"L-glutamine:D-fructose-6-phosphate isomerase (deaminating)","type":"related"},{"name":"glucosamine 6-phosphate synthase activity","type":"related"},{"name":"glucosamine--fructose-6-phosphate aminotransferase (isomerizing) activity","type":"related"},{"name":"glucosamine-6-phosphate isomerase (glutamine-forming) activity","type":"exact"},{"name":"glucosamine-6-phosphate synthase activity","type":"related"},{"name":"glucosaminephosphate isomerase","type":"broad"},{"name":"hexosephosphate aminotransferase activity","type":"related"}],"termid":"GO:0004360","terms_by_termid":{"GO:0004360":null}}


id: GO:0010640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the platelet-derived growth factor receptor signaling pathway.","definition_xrefs":["GOC:tb","GOC:dph","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"regulation of platelet-derived growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0010640"}


id: PBO:0041175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 1 member A1 pseudogene 1","termid":"PBO:0041175"}


id: PR:P22190
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P22190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cox1 intron-2 37.2 kDa protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.03","synonyms":[{"name":"Spom972h-SPMIT.03","type":"exact"},{"name":"maturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22190"}


id: PBO:0087004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein (RhoGAP); involved in control of the cytoskeleton organization; targets the essential Rho-GTPase Cdc42p, which controls establishment and maintenance of cell polarity, including bud-site assembly","termid":"PBO:0087004"}


id: GO:0046136
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88797,113427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"vitamin metabolic process","termid":"GO:0006766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vitamin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of vitamin metabolic process","type":"narrow"},{"name":"positive regulation of vitamin metabolism","type":"exact"},{"name":"stimulation of vitamin metabolic process","type":"narrow"},{"name":"up regulation of vitamin metabolic process","type":"exact"},{"name":"up-regulation of vitamin metabolic process","type":"exact"},{"name":"upregulation of vitamin metabolic process","type":"exact"}],"termid":"GO:0046136","terms_by_termid":{"GO:0090180":null}}


id: GO:2001019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde axon cargo transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of retrograde axon cargo transport","termid":"GO:2001017"},{"relation_name":"positively_regulates","term_name":"retrograde axonal transport","termid":"GO:0008090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of retrograde axon cargo transport","synonyms":[{"name":"positive regulation of retrograde axonal transport","type":"exact"}],"termid":"GO:2001019"}


id: PBO:0088252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mRNA processing protein Cox24/Pet20","termid":"PBO:0088252"}


id: MONDO:0011006
data:
  {"annotated_genes":["SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86262,86263],"is_not":false,"summary":null,"term":"MONDO:0011006"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant spastic paraplegia type 9","termid":"MONDO:0015091"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 9A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1800401","DOID:0110824","GARD:9583","OMIM:601162","MESH:C536868","Orphanet:447753","UMLS:C5568978"],"synonyms":[{"name":"AD-SPG9A","type":"exact"},{"name":"SPG9A","type":"exact"},{"name":"autosomal dominant complex spastic paraplegia type 9A","type":"exact"},{"name":"autosomal dominant spastic paraplegia 9A","type":"exact"},{"name":"cataracts motor neuropathy-short stature-skeletal anomalies syndrome","type":"exact"},{"name":"cataracts with motor neuronopathy, short stature and skeletal abnormalities","type":"exact"},{"name":"cataracts with motor neuronopathy, short stature, and skeletal abnormalities","type":"related"},{"name":"hereditary spastic paraplegia type 9A","type":"exact"},{"name":"spastic paraparesis with amyopathy, cataracts and gastroesophageal reflux","type":"exact"},{"name":"spastic paraparesis with amyopathy, cataracts, and gastroesophageal reflux","type":"related"},{"name":"spastic paraparesis with amyotrophy, cataracts, and gastroesophageal reflux","type":"related"},{"name":"spastic paraplegia 9A, autosomal dominant","type":"related"}],"termid":"MONDO:0011006","terms_by_termid":{"MONDO:0011006":null},"xrefs":{"Monarch":{"xref_id":"0011006"}}}


id: FYPO:0003165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell undergoes mitotic catastrophe (i.e. enters mitosis prematurely and with defective chromosome segregation), and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal mitosis, such that the septum physically divides the nucleus into two parts, and produces inviable daughter cells.","definition_xrefs":["PomBase:mah","PomBase:jh","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mistimed mitosis","termid":"FYPO:0001204"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"mistimed mitosis","termid":"FYPO:0001204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000032","FYPO:0000002","FYPO:0000631","FYPO:0000004","FYPO:0000337","FYPO:0001320","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"cut with abnormal chromosome segregation","secondary_identifiers":["FYPO:0001048"],"synonyms":[{"name":"cut with abnormal chromosome segregation during mitotic cell cycle","type":"related"},{"name":"cut with abnormal chromosome segregation during vegetative growth","type":"exact"},{"name":"cut with mitotic catastrophe","type":"related"},{"name":"mitotic catastrophe with cut","type":"related"},{"name":"septation following abnormal chromosome segregation, with septum dividing nucleus","type":"exact"}],"termid":"FYPO:0003165"}


id: GO:1900156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone trabecula formation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of bone trabecula formation","termid":"GO:1900154"},{"relation_name":"positively_regulates","term_name":"bone trabecula formation","termid":"GO:0060346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone trabecula formation","synonyms":[{"name":"activation of bone trabecula biogenesis","type":"related"},{"name":"activation of bone trabecula formation","type":"narrow"},{"name":"activation of bone trabeculation","type":"narrow"},{"name":"activation of skeletal trabecula biogenesis","type":"related"},{"name":"activation of skeletal trabecula formation","type":"narrow"},{"name":"activation of skeletal trabeculation","type":"narrow"},{"name":"positive regulation of bone trabecula biogenesis","type":"related"},{"name":"positive regulation of bone trabeculation","type":"exact"},{"name":"positive regulation of skeletal trabecula biogenesis","type":"related"},{"name":"positive regulation of skeletal trabecula formation","type":"exact"},{"name":"positive regulation of skeletal trabeculation","type":"exact"},{"name":"up regulation of bone trabecula biogenesis","type":"related"},{"name":"up regulation of bone trabecula formation","type":"exact"},{"name":"up regulation of bone trabeculation","type":"exact"},{"name":"up regulation of skeletal trabecula biogenesis","type":"related"},{"name":"up regulation of skeletal trabecula formation","type":"exact"},{"name":"up regulation of skeletal trabeculation","type":"exact"},{"name":"up-regulation of bone trabecula biogenesis","type":"related"},{"name":"up-regulation of bone trabecula formation","type":"exact"},{"name":"up-regulation of bone trabeculation","type":"exact"},{"name":"up-regulation of skeletal trabecula biogenesis","type":"related"},{"name":"up-regulation of skeletal trabecula formation","type":"exact"},{"name":"up-regulation of skeletal trabeculation","type":"exact"},{"name":"upregulation of bone trabecula biogenesis","type":"related"},{"name":"upregulation of bone trabecula formation","type":"exact"},{"name":"upregulation of bone trabeculation","type":"exact"},{"name":"upregulation of skeletal trabecula biogenesis","type":"related"},{"name":"upregulation of skeletal trabecula formation","type":"exact"},{"name":"upregulation of skeletal trabeculation","type":"exact"}],"termid":"GO:1900156"}


id: GO:1903225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:23154389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"negatively_regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endodermal cell differentiation","synonyms":[{"name":"down regulation of endoderm cell differentiation","type":"exact"},{"name":"down regulation of endodermal cell differentiation","type":"exact"},{"name":"down-regulation of endoderm cell differentiation","type":"exact"},{"name":"down-regulation of endodermal cell differentiation","type":"exact"},{"name":"downregulation of endoderm cell differentiation","type":"exact"},{"name":"downregulation of endodermal cell differentiation","type":"exact"},{"name":"inhibition of endoderm cell differentiation","type":"narrow"},{"name":"inhibition of endodermal cell differentiation","type":"narrow"},{"name":"negative regulation of endoderm cell differentiation","type":"exact"}],"termid":"GO:1903225"}


id: PBO:0058846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8075","termid":"PBO:0058846"}


id: PBO:0054120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1486","termid":"PBO:0054120"}


id: MONDO:0013430
data:
  {"annotated_genes":["SJAG_01267"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86670],"is_not":false,"summary":null,"term":"MONDO:0013430"}]},"cv_name":"mondo","definition":"Any Meier-Gorlin syndrome in which the cause of the disease is a mutation in the ORC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01267":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613803","UMLS:C3151113","GARD:15710","DOID:0080514","MEDGEN:462463"],"synonyms":[{"name":"MGORS3","type":"related"},{"name":"Meier-GORLIN syndrome 3","type":"related"},{"name":"Meier-Gorlin syndrome 3","type":"exact"},{"name":"Meier-Gorlin syndrome caused by mutation in ORC6","type":"exact"},{"name":"Meier-Gorlin syndrome type 3","type":"exact"},{"name":"ORC6 Meier-Gorlin syndrome","type":"exact"}],"termid":"MONDO:0013430","terms_by_termid":{"MONDO:0013430":null},"xrefs":{"Monarch":{"xref_id":"0013430"}}}


id: MONDO:0014740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the HOMER2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 68","secondary_identifiers":["GARD:18144","DOID:0110589","MEDGEN:898808","UMLS:C4225240","OMIM:616707"],"synonyms":[{"name":"DFNA68","type":"narrow"},{"name":"HOMER2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 68","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 68","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in HOMER2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 68","type":"narrow"},{"name":"deafness, autosomal dominant 68","type":"narrow"},{"name":"deafness, autosomal dominant type 68","type":"narrow"}],"termid":"MONDO:0014740","xrefs":{"Monarch":{"xref_id":"0014740"}}}


id: PBO:0059567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1J, pseudogene","termid":"PBO:0059567"}


id: MONDO:0019603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopenia-myopia-hearing loss-intellectual disability-facial dysmorphism syndrome is characterized by severe hypertelorism, brachycephaly, abnormal ears, sloping shoulders, enamel hypoplasia, osteopaenia with frequent fractures, severe myopia, mild to moderate sensorineural hearing loss and mild intellectual deficit. It has been described in two brothers born to first-cousin parents. No chromosomal anomalies were detected. Transmission appears to be autosomal recessive or X-linked.","definition_xrefs":["Orphanet:91133"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopenia-myopia-hearing loss-intellectual disability-facial dysmorphism syndrome","secondary_identifiers":["MEDGEN:928492","SCTID:722111004","UMLS:C4302823"],"termid":"MONDO:0019603","xrefs":{"Monarch":{"xref_id":"0019603"}}}


id: PBO:0040399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1","termid":"PBO:0040399"}


id: PBO:0067230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 301, pseudogene","termid":"PBO:0067230"}


id: GO:0061591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a population of galactosylceramide molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet as a result of a calcium stimulus.","definition_xrefs":["GOC:krc","PMID:23532839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium activated phospholipid scrambling","termid":"GO:0061588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"calcium activated galactosylceramide scrambling","termid":"GO:0061591"}


id: PBO:0082718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1 complex; which associates with RNA polymerase II and is involved in histone methylation; plays a role in regulating Ty1 transposition; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay","termid":"PBO:0082718"}


id: PBO:0075620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty related EVH1 domain containing 1","termid":"PBO:0075620"}


id: PBO:0030305
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_activation_of_monopolar_cell_growth","termid":"PBO:0030305"}


id: PBO:0075252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 4","termid":"PBO:0075252"}


id: MONDO:0002531
data:
  {"annotated_genes":["SJAG_01111","SJAG_03453","SJAG_04213","SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[86564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[85656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[85236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[84813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"},{"annotations":[87082,87081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant tumor involving the skin. Representative examples of benign skin neoplasms include the benign melanocytic skin nevus, acanthoma, sebaceous adenoma, sweat gland adenoma, lipoma, hemangioma, fibroma, and benign fibrous histiocytoma. Representative examples of malignant skin neoplasms include basal cell carcinoma, squamous cell carcinoma, melanoma, and Kaposi sarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_02855":null,"SJAG_03453":null,"SJAG_04213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.2","MESH:D012878","DOID:3165","NCIT:C3372","EFO:0004198","UMLS:C0037286","ONCOTREE:SKIN","SCTID:126488004","MEDGEN:19993"],"synonyms":[{"name":"neoplasm of skin","type":"exact"},{"name":"neoplasm of skin by site","type":"exact"},{"name":"neoplasm of the skin","type":"exact"},{"name":"neoplasm of zone of skin","type":"exact"},{"name":"skin","type":"related"},{"name":"skin benign neoplasm","type":"related"},{"name":"skin neoplasm","type":"exact"},{"name":"skin neoplasms","type":"exact"},{"name":"skin tumor","type":"exact"},{"name":"skin tumour","type":"exact"},{"name":"tumor of skin","type":"exact"},{"name":"tumor of the skin","type":"exact"},{"name":"tumor of zone of skin","type":"exact"},{"name":"tumour of skin","type":"exact"},{"name":"tumour of the skin","type":"exact"},{"name":"tumour of zone of skin","type":"exact"},{"name":"zone of skin neoplasm","type":"exact"},{"name":"zone of skin neoplasm (disease)","type":"exact"},{"name":"zone of skin tumor","type":"exact"},{"name":"zone of skin tumour","type":"exact"}],"termid":"MONDO:0002531","terms_by_termid":{"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0024517":null,"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0002531"}}}


id: PBO:0072264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 2","termid":"PBO:0072264"}


id: PBO:0075615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide peptidase like 2A","termid":"PBO:0075615"}


id: MONDO:0013324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphedema-posterior choanal atresia syndrome","secondary_identifiers":["UMLS:C3150875","GARD:16898","Orphanet:99141","MEDGEN:462225","ICD10CM:Q82.0","OMIM:613611"],"synonyms":[{"name":"CATLPH","type":"related"},{"name":"choanal atresia and lymphedema","type":"related"}],"termid":"MONDO:0013324","xrefs":{"Monarch":{"xref_id":"0013324"}}}


id: MONDO:0017415
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86905,86906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008338"},{"annotations":[86930,86931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020746"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis syndrome","termid":"MONDO:0015225"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"multiple pterygium syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21177","UMLS:C5848053","ICD9:755.8","SCTID:205819008","DOID:0080110","icd11.foundation:834369371","MEDGEN:1852087","NORD:1632","Orphanet:294060","MESH:C537377"],"synonyms":[{"name":"Pterygium Syndrome, Multiple","type":"exact"},{"name":"pterygium syndrome","type":"related"}],"termid":"MONDO:0017415","terms_by_termid":{"MONDO:0008338":null,"MONDO:0020746":null},"xrefs":{"Monarch":{"xref_id":"0017415"}}}


id: PBO:0086343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridine synthase; catalyzes only the formation of pseudouridine (Psi)-2819 in mitochondrial 21S rRNA; not essential for viability","termid":"PBO:0086343"}


id: GO:0020007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A group of cytoskeletal structures and associated membrane-bounded organelles found at the anterior end of adult obligate intracellular protozoan parasites in the phylum Apicomplexa. The apical complex is involved in attachment to and penetration of the host cell, and in parasite proliferation.","definition_xrefs":["GOC:mb","GOC:giardia","PMID:16518471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical complex","termid":"GO:0020007"}


id: GO:1990936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a vascular smooth muscle cell (a non-striated, elongated, spindle-shaped cell found lining the blood vessels) loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","PMID:19088079","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell dedifferentiation involved in phenotypic switching","termid":"GO:0090678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell dedifferentiation","synonyms":[{"name":"vascular smooth muscle cell dedifferentiation","type":"exact"}],"termid":"GO:1990936"}


id: GO:0009409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cold","synonyms":[{"name":"freezing tolerance","type":"related"}],"termid":"GO:0009409"}


id: PBO:0002025
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human infertility","termid":"PBO:0002025"}


id: GO:0018085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of a L-amino acid into its enantiomer, the corresponding D-amino acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"},{"relation_name":"is_a","term_name":"chiral amino acid racemization","termid":"GO:0018366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"}


id: SO:1000017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G, or vice versa.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transversion","secondary_identifiers":["http://en.wikipedia.org/wiki/Transversion"],"termid":"SO:1000017"}


id: MONDO:0015948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic skin vascular disorder (obsolete MONDO:0015948)","secondary_identifiers":["Orphanet:183478"],"synonyms":[{"name":"genetic skin vascular disorder","type":"related"}],"termid":"MONDO:0015948","xrefs":{"Monarch":{"xref_id":"0015948"}}}


id: GO:0048331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the axial mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"axial mesoderm morphogenesis","termid":"GO:0048319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm structural organization","synonyms":[{"name":"axial mesoderm structural organisation","type":"exact"}],"termid":"GO:0048331"}


id: PBO:0049803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocretin receptor 2","termid":"PBO:0049803"}


id: MONDO:0005483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hair loss as a result of chemotherapy treatment.","definition_xrefs":["EFO:0005400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemotherapy-induced alopecia","secondary_identifiers":["NCIT:C164162","UMLS:C5236021","MEDGEN:1720394"],"termid":"MONDO:0005483","xrefs":{"Monarch":{"xref_id":"0005483"}}}


id: MONDO:0060562
data:
  {"annotated_genes":["SJAG_01271"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85024],"is_not":false,"summary":null,"term":"MONDO:0060562"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"encephalopathy, neonatal severe, with lactic acidosis and brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4540052","OMIM:617668","MEDGEN:1624694"],"synonyms":[{"name":"NELABA","type":"related"},{"name":"encephalopathy, neonatal severe, with lactic acidosis and brain abnormalities","type":"exact"},{"name":"lipoyltransferase 2 deficiency","type":"related"}],"termid":"MONDO:0060562","terms_by_termid":{"MONDO:0060562":null},"xrefs":{"Monarch":{"xref_id":"0060562"}}}


id: GO:0047663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + kanamycin B = N(6')-acetylkanamycin B + CoA + H+. This is acetylation of the 6'-amino group of the 6-deoxy-6-aminoglucose ring.","definition_xrefs":["EC:2.3.1.82","RHEA:16449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside 6'-N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01889","MetaCyc:AMINOGLYCOSIDE-N6-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"6'-aminoglycoside-N-acetyltransferase activity","type":"related"},{"name":"AAC(6') activity","type":"related"},{"name":"acetyl-CoA:kanamycin-B N6'-acetyltransferase activity","type":"narrow"},{"name":"aminoglycoside N6'-acetyltransferase activity","type":"exact"},{"name":"aminoglycoside-6'-acetyltransferase activity","type":"related"},{"name":"aminoglycoside-6-N-acetyltransferase activity","type":"related"},{"name":"kanamycin 6'-N-acetyltransferase activity","type":"narrow"}],"termid":"GO:0047663"}


id: MONDO:0006326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma arising from and extending beyond the structures of the eye.","definition_xrefs":["NCIT:C7913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular melanoma","termid":"MONDO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"ocular melanoma with extraocular extension","secondary_identifiers":["MEDGEN:75884","UMLS:C0278869"],"synonyms":[{"name":"extraocular extension melanoma","type":"exact"},{"name":"extraocular extension of melanoma","type":"exact"},{"name":"ocular melanoma with extraocular extension","type":"exact"}],"termid":"MONDO:0006326","xrefs":{"Monarch":{"xref_id":"0006326"}}}


id: MONDO:0700221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease that occurs as a consequence of immunosuppression in a recipient of a solid organ transplant, or as a consequence of the transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease related to transplantation","termid":"MONDO:0700220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease related to solid organ transplantation","termid":"MONDO:0700221","xrefs":{"Monarch":{"xref_id":"0700221"}}}


id: GO:0052569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of nitric oxide produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defense-related symbiont nitric oxide production (obsolete GO:0052569)","synonyms":[{"name":"response to defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052569"}


id: PR:O14209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C6B12.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.04c","secondary_identifiers":["UniProtKB:O14209"],"synonyms":[{"name":"Spom972h-ybdL","type":"exact"}],"termid":"PR:O14209"}


id: GO:0006626
data:
  {"annotated_genes":["SJAG_04432","SJAG_01647","SJAG_01597","SJAG_02077","SJAG_01004","SJAG_03560","SJAG_05259","SJAG_02016","SJAG_04996","SJAG_01442","SJAG_04208","SJAG_00404","SJAG_00569","SJAG_04336","SJAG_02809","SJAG_03515","SJAG_03502","SJAG_00564","SJAG_02917","SJAG_01684","SJAG_02398","SJAG_07010","SJAG_01780","SJAG_01640","SJAG_01951","SJAG_03648","SJAG_01120","SJAG_00196","SJAG_04072","SJAG_02355","SJAG_02361","SJAG_04533","SJAG_01615","SJAG_01949","SJAG_00373","SJAG_01560","SJAG_02034","SJAG_01879","SJAG_03416","SJAG_02797","SJAG_03358","SJAG_02524","SJAG_04218","SJAG_00687","SJAG_02397","SJAG_04014","SJAG_03415","SJAG_04641"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98152,102211],"is_not":false,"summary":null,"term":"GO:0006626"},{"annotations":[98246,96892,94809],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160203"},{"annotations":[76923,77386],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045041"},{"annotations":[104949,94277,99004,100076,103034,96641,107342,111545,88091,107263,107320,114972,99188,109627,102447,99302,105934,116522,89299,116991,90659],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030150"},{"annotations":[107343,116009,75406,107321,88417,90154,112941,73288,73772,102675,77599],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[69744,110149,58881,109798,97987,107322,111539,76345,98338],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045040"},{"annotations":[76633,80014,101961,69614,77846,79740],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards and into the mitochondrion, usually mediated by mitochondrial proteins that recognize signals contained within the imported protein.","definition_xrefs":["GOC:mcc","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01647":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02016":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03648":null,"SJAG_04014":null,"SJAG_04072":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006605"],"is_obsolete":false,"name":"protein targeting to mitochondrion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0043681","Reactome:R-HSA-1268020"],"synonyms":[{"name":"mitochondrial protein import","type":"related"},{"name":"mitochondrial translocation","type":"related"},{"name":"protein import into mitochondrion","type":"exact"},{"name":"protein targeting to mitochondria","type":"exact"},{"name":"protein-mitochondrial targeting","type":"exact"}],"termid":"GO:0006626","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0160203":null}}


id: MONDO:0020770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy","termid":"MONDO:0020771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0021190","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 3","secondary_identifiers":["MEDGEN:1673607","OMIM:618387","DOID:0070465","UMLS:C5193070"],"synonyms":[{"name":"SCAN3","type":"related"},{"name":"SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE, WITH AXONAL NEUROPATHY 3","type":"related"}],"termid":"MONDO:0020770","xrefs":{"Monarch":{"xref_id":"0020770"}}}


id: PBO:0048761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMCL1 pseudogene 2","termid":"PBO:0048761"}


id: CHEBI:18420
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A magnesium cation that has formula Mg.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium(2+)","secondary_identifiers":["CHEBI:25112","CHEBI:6635","CHEBI:13379","CHEBI:49736"],"termid":"CHEBI:18420"}


id: PBO:0062396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 18 pseudogene","termid":"PBO:0062396"}


id: PBO:0051197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-15 (pseudogene)","termid":"PBO:0051197"}


id: MONDO:0000888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the mucous membranes lining the gastrointestinal tract.","definition_xrefs":["NCIT:C3853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"mucositis","termid":"MONDO:0020579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastrointestinal mucositis","secondary_identifiers":["ICD9:538","ICD9:558.9","MEDGEN:636691","DOID:0080178","SCTID:95518006","UMLS:C0521585"],"synonyms":[{"name":"gastrointestinal system mucosa inflammation","type":"exact"},{"name":"gastrointestinal system mucosaitis","type":"exact"},{"name":"inflammation of gastrointestinal system mucosa","type":"exact"},{"name":"mucositis","type":"related"}],"termid":"MONDO:0000888","xrefs":{"Monarch":{"xref_id":"0000888"}}}


id: GO:0015080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of silver (Ag+) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"silver ion transmembrane transporter activity","synonyms":[{"name":"silver transporter activity","type":"exact"}],"termid":"GO:0015080"}


id: PBO:0050571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous recombination factor with OB-fold","termid":"PBO:0050571"}


id: PBO:0090024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination mediator Swi5","termid":"PBO:0090024"}


id: PBO:0001294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytochrome c-heme linkage protein Cyc2 (predicted)","termid":"PBO:0001294"}


id: PBO:0061749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 2","termid":"PBO:0061749"}


id: PBO:0049500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 7","termid":"PBO:0049500"}


id: MONDO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplasm usually occurring in infants. It is characterized by the presence of a mixture of melanin-containing epithelial cells and smaller neuroblast-like cells. It may involve the skull and facial bones, or the epididymis. It usually has a benign clinical course.","definition_xrefs":["NCIT:C3717"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"primitive neuroectodermal tumor","termid":"MONDO:0005462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotic neuroectodermal tumor","secondary_identifiers":["SCTID:404042005","MESH:D017600","DOID:166","UMLS:C0206094","ICDO:9363/0","MEDGEN:60073"],"synonyms":[{"name":"MNTI","type":"exact"},{"name":"infantile melanotic neuroectodermal neoplasm","type":"exact"},{"name":"melanotic Progonoma","type":"exact"},{"name":"melanotic neuroectodermal tumor (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumor of infancy","type":"exact"},{"name":"melanotic neuroectodermal tumor of infancy (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumour (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumour of infancy","type":"exact"},{"name":"melanotic neuroectodermal tumour of infancy (morphologic abnormality)","type":"exact"},{"name":"pigmented neuroectodermal tumor","type":"exact"},{"name":"pigmented neuroectodermal tumor of infancy","type":"exact"},{"name":"pigmented neuroectodermal tumour","type":"exact"},{"name":"pigmented neuroectodermal tumour of infancy","type":"exact"},{"name":"retinal anlage neoplasm","type":"exact"}],"termid":"MONDO:0002072","xrefs":{"Monarch":{"xref_id":"0002072"}}}


id: MONDO:0700223
data:
  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id: GO:0046318
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id: GO:1900704
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id: PBO:0045476
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id: _global:indirectly_causally_upstream_of
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id: MOD:00995
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id: MONDO:0014391
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id: PBO:0018017
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id: MONDO:0006658
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id: PBO:0013003
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id: GO:0061970
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id: GO:1905606
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id: PBO:0062691
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id: MONDO:0100475
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id: PBO:0053035
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id: MONDO:0001734
data:
  {"annotated_genes":["SJAG_00289","SJAG_05346","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008612"},{"annotations":[86236,86235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013199"}]},"cv_name":"mondo","definition":"Hereditary disease characterized by seizures, intellectual disability, developmental delay, and skin and ocular lesions. First signs usually occur during infancy or childhood but in rare cases may not occur until 2nd or 3rd decade.","definition_xrefs":["NCIT:C3424"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited nervous system cancer-predisposing syndrome (obsolete MONDO:0016756)","termid":"MONDO:0016756"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited renal cancer-predisposing syndrome (obsolete MONDO:0017891)","termid":"MONDO:0017891"},{"relation_name":"excluded_subClassOf","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"tuberous sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200826","OMIMPS:191100","GARD:7830","icd11.foundation:1903085809","MedDRA:10045138","Orphanet:805","MESH:D014402","DOID:13515","SCTID:7199000","UMLS:C0041341","MEDGEN:22518","ICD9:759.5","NANDO:1200607","NORD:1802"],"synonyms":[{"name":"Bourneville disease","type":"exact"},{"name":"Bourneville syndrome","type":"exact"},{"name":"Bourneville's disease","type":"exact"},{"name":"Bourneville's syndrome","type":"exact"},{"name":"TSC","type":"exact"},{"name":"adenoma sebaceum","type":"related"},{"name":"adenoma sebaceum syndrome","type":"related"},{"name":"cerebral sclerosis","type":"exact"},{"name":"epiloia","type":"exact"},{"name":"tuberose sclerosis","type":"exact"},{"name":"tuberous sclerosis","type":"exact"},{"name":"tuberous sclerosis complex","type":"exact"},{"name":"tuberous sclerosis syndrome","type":"exact"}],"termid":"MONDO:0001734","terms_by_termid":{"MONDO:0008612":null,"MONDO:0013199":null},"xrefs":{"Monarch":{"xref_id":"0001734"}}}


id: GO:0071493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 280 to 315 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV-B","termid":"GO:0010224"},{"relation_name":"is_a","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to UV-B","synonyms":[{"name":"cellular response to UV-B light stimulus","type":"exact"},{"name":"cellular response to UV-B radiation stimulus","type":"exact"},{"name":"cellular response to UVB light stimulus","type":"exact"},{"name":"cellular response to UVB radiation stimulus","type":"exact"},{"name":"cellular response to medium wave ultraviolet light stimulus","type":"exact"},{"name":"cellular response to medium wave ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0071493"}


id: PBO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 3","termid":"PBO:0061064"}


id: PBO:0030720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_polysaccharide_level","termid":"PBO:0030720"}


id: MONDO:0001193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chorioretinal scar (obsolete MONDO:0001193)","secondary_identifiers":["SCTID:53854005","DOID:11086","ICD9:363.3","ICD9:363.30"],"termid":"MONDO:0001193","xrefs":{"Monarch":{"xref_id":"0001193"}}}


id: GO:1990966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of generating ATP in the nucleus from poly-ADP-D-ribose. Nuclear ATP generation is required for extensive chromatin remodeling events that are energy-consuming.","definition_xrefs":["PMID:27257257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"ATP metabolic process","termid":"GO:0046034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ATP generation from poly-ADP-D-ribose","termid":"GO:1990966"}


id: PBO:0063551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEF1 and COL16A1 antisense RNA 1","termid":"PBO:0063551"}


id: PBO:0055805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 1","termid":"PBO:0055805"}


id: MONDO:0002693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation or presence of a blood clot (thrombus) in the lateral sinuses. This condition is often associated with ear infections (otitis media or mastoiditis) without antibiotic treatment. In developed nations, lateral sinus thrombosis can result from craniocerebral trauma; brain neoplasms; neurosurgical procedures; thrombophilia; and other conditions. Clinical features include headache; vertigo; and increased intracranial pressure.","definition_xrefs":["MESH:D020227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial sinus thrombosis","termid":"MONDO:0002692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral sinus thrombosis","secondary_identifiers":["MEDGEN:124359","UMLS:C0270639","DOID:3574","SCTID:192761004"],"synonyms":[{"name":"thrombosis of lateral venous sinus","type":"exact"},{"name":"thrombosis transverse sinus","type":"exact"}],"termid":"MONDO:0002693","xrefs":{"Monarch":{"xref_id":"0002693"}}}


id: PBO:0005447
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sty1 Regulated Kinase","termid":"PBO:0005447"}


id: MONDO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with perineal fistula (obsolete MONDO:0035780)","secondary_identifiers":["Orphanet:600952"],"termid":"MONDO:0035780","xrefs":{"Monarch":{"xref_id":"0035780"}}}


id: PBO:0068719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 8, pseudogene","termid":"PBO:0068719"}


id: PBO:0043543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin pseudogene 2","termid":"PBO:0043543"}


id: MONDO:0850197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and TP53 mutations that may be present or absent.","definition_xrefs":["DOID:0080703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated","secondary_identifiers":["NCIT:C129441","MEDGEN:1375478","UMLS:C4330671"],"termid":"MONDO:0850197","xrefs":{"Monarch":{"xref_id":"0850197"}}}


id: PBO:0081910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 877, pseudogene","termid":"PBO:0081910"}


id: FYPO:0001219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during a cellular response to nitrogen starvation is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein level during cellular response to nitrogen starvation","synonyms":[{"name":"increased protein accumulation during cellular response to nitrogen starvation","type":"related"},{"name":"increased protein level during cellular response to nitrogen depletion","type":"exact"},{"name":"increased protein level during cellular response to nitrogen deprivation","type":"exact"},{"name":"increased protein level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001219"}


id: PBO:0089513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADP ribosylation factor GTPase activating protein family","termid":"PBO:0089513"}


id: PBO:0069497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 764, pseudogene","termid":"PBO:0069497"}


id: MONDO:0017055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycophenolate mofetil (MMF) embryopathy is a malformative syndrome due to the teratogenic effect of MMF, an effective immunosuppressive agent widely used for the prevention of organ rejection after organ transplantation.","definition_xrefs":["Orphanet:268249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycophenolate mofetil embryopathy","secondary_identifiers":["UMLS:C4509879","GARD:20946","icd11.foundation:2111105927","MEDGEN:1387699","SCTID:723406000"],"synonyms":[{"name":"MMF embryopathy","type":"exact"}],"termid":"MONDO:0017055","xrefs":{"Monarch":{"xref_id":"0017055"}}}


id: GO:0150008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endocytosis of large regions of presynaptic membrane after intense stimulation-mediated fusion of multiple synaptic vesicles. Bulk endocytosis is triggered by high loads of membrane addition through exocytosis of synaptic vesicles and elevated concentration of calcium in the presynapse.","definition_xrefs":["PMID:28391090","GOC:ha","GOC:bc","PMID:19266323","PMID:18579735","PMID:26430111","GOC:aruk","PMID:18250322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"bulk synaptic vesicle endocytosis","synonyms":[{"name":"ADBE","type":"exact"},{"name":"activity-dependent bulk endocytosis","type":"exact"},{"name":"activity-dependent bulk synaptic vesicle endocytosis","type":"exact"},{"name":"bulk endocytosis","type":"exact"}],"termid":"GO:0150008"}


id: PBO:0074236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 49 member 3","termid":"PBO:0074236"}


id: FYPO:0001792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body duplication does not occur, leaving the cell with a single spindle pole body later in the cell cycle than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body duplication","termid":"FYPO:0001791"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abolished mitotic spindle pole body duplication","synonyms":[{"name":"abolished mitotic SPB duplication","type":"exact"},{"name":"abolished mitotic spindle pole body duplication during vegetative growth","type":"exact"},{"name":"abolished spindle pole body duplication during mitotic cell cycle","type":"related"},{"name":"mitotic spindle pole body duplication abolished","type":"exact"},{"name":"single mitotic spindle pole body","type":"related"}],"termid":"FYPO:0001792"}


id: GO:1900544
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of purine nucleotide metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide metabolic process","termid":"GO:0045981"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"positively_regulates","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of purine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of purine metabolic process","type":"narrow"},{"name":"activation of purine metabolism","type":"narrow"},{"name":"activation of purine nucleotide metabolic process","type":"narrow"},{"name":"activation of purine nucleotide metabolism","type":"narrow"},{"name":"positive regulation of purine metabolic process","type":"narrow"},{"name":"positive regulation of purine metabolism","type":"narrow"},{"name":"positive regulation of purine nucleotide metabolism","type":"exact"},{"name":"up regulation of purine metabolic process","type":"narrow"},{"name":"up regulation of purine metabolism","type":"narrow"},{"name":"up regulation of purine nucleotide metabolic process","type":"exact"},{"name":"up regulation of purine nucleotide metabolism","type":"exact"},{"name":"up-regulation of purine metabolic process","type":"narrow"},{"name":"up-regulation of purine metabolism","type":"narrow"},{"name":"up-regulation of purine nucleotide metabolic process","type":"exact"},{"name":"up-regulation of purine nucleotide metabolism","type":"exact"},{"name":"upregulation of purine metabolic process","type":"narrow"},{"name":"upregulation of purine metabolism","type":"narrow"},{"name":"upregulation of purine nucleotide metabolic process","type":"exact"},{"name":"upregulation of purine nucleotide metabolism","type":"exact"}],"termid":"GO:1900544","terms_by_termid":{"GO:1905857":null}}


id: PBO:0059903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 26","termid":"PBO:0059903"}


id: PBO:0049708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAS2 antisense RNA 1","termid":"PBO:0049708"}


id: GO:0016243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the autophagosome.","definition_xrefs":["GOC:krc","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"},{"relation_name":"is_a","term_name":"autophagosome organization","termid":"GO:1905037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of autophagosome size","synonyms":[{"name":"regulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0016243"}


id: GO:0100009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any prostaglandin secretion process that regulates fever generation.","definition_xrefs":["GOC:cjm","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin secretion","termid":"GO:0032310"},{"relation_name":"regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"}


id: PBO:0068569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 20, pseudogene","termid":"PBO:0068569"}


id: FYPO:0007368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell's energy charge higher than normal. Energy charge is a measure of energy available to the cell, as reflected in the ATP-ADP-AMP balance and defined as (ATP + 1/2 ADP)/(AMP + ADP + ATP).","definition_xrefs":["PMID:6027798","PMID:32319721","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased energy charge","termid":"FYPO:0007368"}


id: PR:O14460
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23115:SF4","OMA:SCHPO04354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.01c","secondary_identifiers":["UniProtKB:O14460"],"synonyms":[{"name":"EF-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EEF2","type":"exact"}],"termid":"PR:O14460"}


id: GO:2001095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mannotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mannotriose transport","termid":"GO:2001095"}


id: GO:1904610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',4,4',5-pentachlorobiphenyl stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23196670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',4,4',5-pentachlorobiphenyl","synonyms":[{"name":"response to PCB 126","type":"exact"}],"termid":"GO:1904610"}


id: GO:2000978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of forebrain neuron differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of forebrain neuron differentiation","termid":"GO:2000977"},{"relation_name":"negatively_regulates","term_name":"forebrain neuron differentiation","termid":"GO:0021879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of forebrain neuron differentiation","termid":"GO:2000978"}


id: PBO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA poly(A)-bearing (predicted)","termid":"PBO:0000699"}


id: PBO:0069449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 714, pseudogene","termid":"PBO:0069449"}


id: PBO:0042730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein I","termid":"PBO:0042730"}


id: GO:0007468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of rhodopsin gene expression. This includes transcriptional, translational, or posttranslational regulation.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of rhodopsin gene expression (obsolete GO:0007468)","synonyms":[{"name":"regulation of rhodopsin gene activity","type":"exact"}],"termid":"GO:0007468"}


id: PBO:0072515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 44","termid":"PBO:0072515"}


id: PBO:0042756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 19","termid":"PBO:0042756"}


id: PBO:0040153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH2L pseudogene 2","termid":"PBO:0040153"}


id: PATO:0001235
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001235 strength value (obsolete PATO:0001235)","termid":"PATO:0001235"}


id: PBO:0113227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb-related transcription factor; involved in regulating basal and induced expression of genes of the purine and histidine biosynthesis pathways; controls cellular ATP levels; also involved in regulation of meiotic recombination at specific genes","termid":"PBO:0113227"}


id: MONDO:0009292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogen branching enzyme (GBE) deficiency (Andersen's disease or amylopectinosis), or glycogen storage disease type 4 (GSD4), is a rare and severe form of glycogen storage disease which accounts for approximately 3% of all the glycogen storage diseases.","definition_xrefs":["Orphanet:367"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular glycogenosis (obsolete MONDO:0016118)","termid":"MONDO:0016118"},{"relation_name":"excluded_subClassOf","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease due to glycogen branching enzyme deficiency","secondary_identifiers":["NANDO:2200540","SCTID:124267007","NANDO:1200827","DOID:2750","GARD:2520","ICD9:277.6","NANDO:1200850","NCIT:C84737","MedDRA:10053249","NORD:770","OMIM:232500","UMLS:C0017923","MEDGEN:6642"],"synonyms":[{"name":"Andersen Disease (GSD IV)","type":"exact"},{"name":"Andersen disease","type":"exact"},{"name":"Andersen's disease","type":"exact"},{"name":"GBE1 glycogen storage disease","type":"exact"},{"name":"GSD 4","type":"related"},{"name":"GSD IV","type":"related"},{"name":"GSD IV, classic hepatic","type":"related"},{"name":"GSD IV, neuromuscular form, adult, with isolated myopathy","type":"related"},{"name":"GSD IV, neuromuscular form, childhood","type":"related"},{"name":"GSD IV, neuromuscular form, congenital","type":"related"},{"name":"GSD IV, neuromuscular form, fatal perinatal","type":"related"},{"name":"GSD IV, nonprogressive hepatic","type":"related"},{"name":"GSD due to glycogen branching enzyme deficiency","type":"exact"},{"name":"GSD type 4","type":"exact"},{"name":"GSD type IV","type":"exact"},{"name":"GSD4","type":"related"},{"name":"Gbe1 deficiency","type":"related"},{"name":"amylopectinosis","type":"exact"},{"name":"brancher deficiency","type":"related"},{"name":"brancher deficiency glycogenosis","type":"exact"},{"name":"branching-transferase deficiency glycogenosis","type":"exact"},{"name":"cirrhosis, familial, with deposition of abnormal glycogen","type":"related"},{"name":"deficiency of 1,4-alpha-glucan branching enzyme","type":"exact"},{"name":"glycogen branching enzyme deficiency","type":"related"},{"name":"glycogen storage disease 4","type":"related"},{"name":"glycogen storage disease IV","type":"related"},{"name":"glycogen storage disease caused by mutation in GBE1","type":"exact"},{"name":"glycogen storage disease due to glycogen branching enzyme deficiency","type":"exact"},{"name":"glycogen storage disease type 4","type":"exact"},{"name":"glycogen storage disease type IV","type":"exact"},{"name":"glycogen storage disease, type IV","type":"exact"},{"name":"glycogenosis 4","type":"related"},{"name":"glycogenosis due to glycogen branching enzyme deficiency","type":"exact"},{"name":"glycogenosis type 4","type":"exact"},{"name":"glycogenosis type IV","type":"exact"}],"termid":"MONDO:0009292","xrefs":{"Monarch":{"xref_id":"0009292"}}}


id: PBO:0074406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 11","termid":"PBO:0074406"}


id: GO:1990720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of two microtubules present in the axonemal central pair. It is distinguishable from the C1 axonemal microtubule (also called C1 tubule) by the presence of differing protein components of the projections.","definition_xrefs":["PMID:21586547","GOC:cilia","PMID:9295136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal central pair","termid":"GO:0097540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0015630"],"is_obsolete":false,"name":"C2 axonemal microtubule","synonyms":[{"name":"C2 tubule","type":"broad"}],"termid":"GO:1990720"}


id: PBO:0081238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 7","termid":"PBO:0081238"}


id: FYPO:0007133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to medial cortical node","termid":"FYPO:0002999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to medial cortical node during mitotic interphase","synonyms":[{"name":"normal protein localisation to medial cortical node during mitotic interphase","type":"exact"},{"name":"normal protein localization to cortical medial dot during mitotic interphase","type":"exact"},{"name":"normal protein localization to cytokinetic nodes during mitotic interphase","type":"exact"},{"name":"normal protein localization to medial cortical node during interphase of mitotic cell cycle","type":"related"},{"name":"normal protein localization to medial cortical node during mitotic interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortical nodes during mitotic interphase","type":"exact"},{"name":"normal protein recruitment to medial cortical node during mitotic interphase","type":"related"}],"termid":"FYPO:0007133"}


id: GO:0010092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of an animal organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"animal organ formation","termid":"GO:0048645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ identity","termid":"GO:0010092"}


id: MONDO:0019602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other inborn metabolic disease (obsolete MONDO:0019602)","secondary_identifiers":["Orphanet:91088"],"synonyms":[{"name":"other metabolic disease","type":"related"}],"termid":"MONDO:0019602","xrefs":{"Monarch":{"xref_id":"0019602"}}}


id: GO:1904030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:als","PMID:22995177","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclin-dependent protein kinase activity","synonyms":[{"name":"down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"inhibition of cyclin-dependent protein kinase activity","type":"exact"}],"termid":"GO:1904030"}


id: PBO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Dmc1","termid":"PBO:0002023"}


id: MONDO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an enduring pattern of an extreme need to be taken care of together with fear of separation that lead the individual to urgently seek out and submit to another person and allow that person to make decisions that impact all areas of the individual's life.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"personality disorder","termid":"MONDO:0002028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dependent personality disorder","secondary_identifiers":["UMLS:C0011548","MESH:D003859","ICD10CM:F60.7","ICD9:301.6","MEDGEN:4225","icd11.foundation:1283123068","NCIT:C92637","SCTID:84466009","DOID:10931"],"termid":"MONDO:0001157","xrefs":{"Monarch":{"xref_id":"0001157"}}}


id: PBO:0070593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 60","termid":"PBO:0070593"}


id: GO:0019957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-C chemokine; C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"C-C chemokine binding","termid":"GO:0019957"}


id: MONDO:0043185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pointer syndrome","secondary_identifiers":["MESH:C536323","UMLS:C0796118","MEDGEN:208668"],"synonyms":[{"name":"skeletal abnormalities, camptodactyly, facial anomalies, and feeding difficulties","type":"related"}],"termid":"MONDO:0043185","xrefs":{"Monarch":{"xref_id":"0043185"}}}


id: GO:0097251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"leukotriene B4 metabolic process","termid":"GO:0036102"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"leukotriene B4 biosynthetic process","synonyms":[{"name":"LTB4 anabolism","type":"exact"},{"name":"LTB4 biosynthesis","type":"exact"},{"name":"LTB4 formation","type":"exact"},{"name":"LTB4 synthesis","type":"exact"},{"name":"leukotriene B4 anabolism","type":"exact"},{"name":"leukotriene B4 biosynthesis","type":"exact"},{"name":"leukotriene B4 formation","type":"exact"},{"name":"leukotriene B4 synthesis","type":"exact"}],"termid":"GO:0097251"}


id: PBO:0052012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JMJD1C antisense RNA 1","termid":"PBO:0052012"}


id: MONDO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"infertility due to extratesticular cause","secondary_identifiers":["SCTID:84245004","UMLS:C0021360","MEDGEN:507846","DOID:14096","ICD9:606.8"],"synonyms":[{"name":"infertility due to extratesticular causes","type":"exact"}],"termid":"MONDO:0001877","xrefs":{"Monarch":{"xref_id":"0001877"}}}


id: PBO:0018209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family transmembrane transporter (predicted)","termid":"PBO:0018209"}


id: PBO:0034134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_paraxenology_relationship_with","termid":"PBO:0034134"}


id: MONDO:0034212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chemotherapy-induced toxicity","termid":"MONDO:0800390"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methotrexate toxicity","secondary_identifiers":["MEDGEN:108272","UMLS:C0568062","Orphanet:565782"],"termid":"MONDO:0034212","xrefs":{"Monarch":{"xref_id":"0034212"}}}


id: PBO:0038635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate decarboxylase 1","termid":"PBO:0038635"}


id: MONDO:0003786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choriocarcinoma that arises from the testis during childhood.","definition_xrefs":["NCIT:C6544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma of testis","termid":"MONDO:0003508"},{"relation_name":"is_a","term_name":"childhood testicular germ cell tumor","termid":"MONDO:0003758"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood testicular choriocarcinoma","secondary_identifiers":["DOID:6160","UMLS:C1333006","MEDGEN:272469"],"synonyms":[{"name":"childhood choriocarcinoma of testis","type":"exact"},{"name":"childhood choriocarcinoma of the testis","type":"exact"},{"name":"childhood testicular choriocarcinoma","type":"exact"},{"name":"choriocarcinoma of testis of childhood","type":"exact"},{"name":"paediatric choriocarcinoma of testis","type":"exact"},{"name":"paediatric choriocarcinoma of the testis","type":"exact"},{"name":"paediatric testicular choriocarcinoma","type":"exact"},{"name":"pediatric choriocarcinoma of testis","type":"exact"},{"name":"pediatric choriocarcinoma of the testis","type":"exact"},{"name":"pediatric testicular choriocarcinoma","type":"exact"}],"termid":"MONDO:0003786","xrefs":{"Monarch":{"xref_id":"0003786"}}}


id: PBO:0003604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sed5 (predicted)","termid":"PBO:0003604"}


id: PBO:0040557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1","termid":"PBO:0040557"}


id: GO:0002765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately leading to inhibition of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating signaling pathway","termid":"GO:0002764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"immune response-inhibiting signal transduction","termid":"GO:0002765"}


id: MONDO:0060621
data:
  {"annotated_genes":["SJAG_00443"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84853],"is_not":false,"summary":null,"term":"MONDO:0060621"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00443":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, seizures, and cortical atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1615361","EFO:0009644","UMLS:C4540493","OMIM:617802"],"synonyms":[{"name":"NDMSCA","type":"related"},{"name":"neurodevelopmental disorder with microcephaly, seizures, and cortical atrophy","type":"exact"}],"termid":"MONDO:0060621","terms_by_termid":{"MONDO:0060621":null},"xrefs":{"Monarch":{"xref_id":"0060621"}}}


id: MONDO:0013934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic combined T and B cell immunodeficiency characterized by T- and B-cell lymphopenia, hypergammaglobulinemia and intermittent neutropenia. It presents with recurrent opportunistic viral, bacterial and fungal infections involving skin (cutaneous papillomatosis, molluscum contagiosum, skin abscesses, mucocutaneous candidiasis), upper and lower respiratory tract or septicemia. Other clinical features include autoimmune manifestations (autoimmune hemolytic anemia) and congenital heart defects (atrial septal defects, patent foramen ovale, mitral, triscupid and pulmonary valve insufficiency).","definition_xrefs":["Orphanet:314689"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to STK4 deficiency","secondary_identifiers":["GARD:17430","OMIM:614868","MEDGEN:766857","UMLS:C3553943"],"synonyms":[{"name":"CID due to STK4 deficiency","type":"exact"},{"name":"MST1 deficiency","type":"exact"},{"name":"STK4 deficiency","type":"exact"},{"name":"T-cell immunodeficiency, recurrent infections, and autoimmunity with or without CARDIAC malformations","type":"related"},{"name":"T-cell immunodeficiency, recurrent infections, autoimmunity, and cardiac malformations","type":"exact"},{"name":"TIIAC","type":"exact"}],"termid":"MONDO:0013934","xrefs":{"Monarch":{"xref_id":"0013934"}}}


id: PBO:0003585
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pof Six Interacting Protein","termid":"PBO:0003585"}


id: PBO:0049336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2H2 family member C","termid":"PBO:0049336"}


id: FYPO:0004271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dissolution of the cell septum edging material is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell septum edging catabolic process","synonyms":[{"name":"normal cell septum edging catabolic process during mitotic cell cycle","type":"related"},{"name":"normal cell septum edging catabolic process during vegetative growth","type":"exact"},{"name":"normal cell septum edging catabolism","type":"exact"},{"name":"normal cell septum edging hydrolysis","type":"exact"}],"termid":"FYPO:0004271"}


id: PBO:0065840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 5","termid":"PBO:0065840"}


id: GO:0061835
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The surface of a migrating cell that is in contact with the substratum or cell layer.","definition_xrefs":["PMID:11598004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0009986","GO:0005575"],"is_obsolete":false,"name":"ventral surface of cell","termid":"GO:0061835"}


id: PBO:0041716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calneuron 1","termid":"PBO:0041716"}


id: PR:Q10074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- avt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transporter 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.09c","synonyms":[{"name":"Spom972h-avt3","type":"exact"}],"termid":"PR:Q10074"}


id: PBO:0039297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG11 alpha-1,2-mannosyltransferase","termid":"PBO:0039297"}


id: GO:0070062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.","definition_xrefs":["PMID:19498381","GOC:BHF","GOC:mah","PMID:24009894","PMID:17641064","PMID:15908444","PMID:19442504","PMID:22418571","GOC:vesicles"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular exosome","synonyms":[{"name":"exosome","type":"exact"},{"name":"extracellular vesicular exosome","type":"exact"}],"termid":"GO:0070062"}


id: GO:0061442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in cardiac muscle cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate determination","termid":"GO:0007521"},{"relation_name":"is_a","term_name":"cardiac cell fate determination","termid":"GO:0060913"},{"relation_name":"part_of","term_name":"cardiac muscle cell fate commitment","termid":"GO:0060923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell fate determination","termid":"GO:0061442"}


id: GO:0042860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving achromobactin, a citrate siderophore.","definition_xrefs":["PMID:10928541","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"achromobactin metabolic process","synonyms":[{"name":"achromobactin metabolism","type":"exact"}],"termid":"GO:0042860"}


id: MONDO:0016694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Pituicytoma (obsolete MONDO:0016694)","termid":"MONDO:0016694","xrefs":{"Monarch":{"xref_id":"0016694"}}}


id: PBO:0087037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L18A; intron of RPL18A pre-mRNA forms stem-loop structures that are a target for Rnt1p cleavage leading to degradation; homologous to mammalian ribosomal protein L18, no bacterial homolog; RPL18A has a paralog, RPL18B, that arose from the whole genome duplication","termid":"PBO:0087037"}


id: PBO:0017884
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae FPR1","termid":"PBO:0017884"}


id: GO:0097217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pit-like area in the cell wall of a sieve element; contains pores lined with callose and occupied by strands of protoplasmic material that interconnect the protoplasts of contiguous sieve elements.","definition_xrefs":["POC:curators","ISBN:0471738433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"sieve area","termid":"GO:0097217"}


id: GO:0004778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + succinyl-CoA = CoA + H+ + succinate.","definition_xrefs":["EC:3.1.2.3","RHEA:11516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"succinyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:SUCCINYL-COA-HYDROLASE-RXN","KEGG_REACTION:R00407"],"synonyms":[{"name":"succinyl coenzyme A deacylase activity","type":"related"},{"name":"succinyl coenzyme A hydrolase activity","type":"related"},{"name":"succinyl-CoA acylase activity","type":"related"}],"termid":"GO:0004778"}


id: PBO:0049475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme M","termid":"PBO:0049475"}


id: MONDO:0001440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconjunctivitis","termid":"MONDO:0004768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neurotrophic keratoconjunctivitis","secondary_identifiers":["DOID:12125","UMLS:C0155084","ICD9:370.35","MEDGEN:509777","SCTID:77080005"],"termid":"MONDO:0001440","xrefs":{"Monarch":{"xref_id":"0001440"}}}


id: MONDO:0014594
data:
  {"annotated_genes":["SJAG_01722"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85034],"is_not":false,"summary":null,"term":"MONDO:0014594"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the OSBPL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01722":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 67","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:900413","OMIM:616340","GARD:18141","UMLS:C4084712","DOID:0110588"],"synonyms":[{"name":"DFNA67","type":"narrow"},{"name":"OSBPL2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 67","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 67","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in OSBPL2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 67","type":"narrow"},{"name":"deafness, autosomal dominant 67","type":"narrow"},{"name":"deafness, autosomal dominant type 67","type":"narrow"}],"termid":"MONDO:0014594","terms_by_termid":{"MONDO:0014594":null},"xrefs":{"Monarch":{"xref_id":"0014594"}}}


id: GO:0048454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the sepal. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ structural organization","termid":"GO:0048450"},{"relation_name":"part_of","term_name":"sepal morphogenesis","termid":"GO:0048447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal structural organization","secondary_identifiers":["GO:0048424"],"synonyms":[{"name":"sepal structural organisation","type":"exact"}],"termid":"GO:0048454"}


id: MONDO:0014671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary motor and sensory neuropathy type 6 in which the cause of the disease is a mutation in the SLC25A46 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy type 6","termid":"MONDO:0019551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary motor and sensory, type 6B","secondary_identifiers":["MEDGEN:895482","OMIM:616505","GARD:18092","UMLS:C4225302"],"synonyms":[{"name":"CMT6B","type":"exact"},{"name":"Charcot-Marie-Tooth disease, type 6B","type":"exact"},{"name":"HMSN 6B","type":"exact"},{"name":"HMSN6B","type":"exact"},{"name":"SLC25A46 hereditary motor and sensory neuropathy type 6","type":"exact"},{"name":"hereditary motor and sensory neuropathy type 6 caused by mutation in SLC25A46","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type 6B","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type VIB","type":"exact"}],"termid":"MONDO:0014671","xrefs":{"Monarch":{"xref_id":"0014671"}}}


id: MONDO:0009207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined deficiency of factor V and factor VIII","termid":"MONDO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor V and factor VIII, combined deficiency of, with normal protein C and protein C inhibitor","secondary_identifiers":["GARD:18631","OMIM:227310","UMLS:C1856882","MEDGEN:346462"],"synonyms":[{"name":"factor 5 and Factor VIII, combined deficiency Of, with normal Protein C and Protein C inhibitor","type":"related"},{"name":"factor V and Factor VIII, combined deficiency of, with normal protein c and Protein C inhibitor","type":"exact"}],"termid":"MONDO:0009207","xrefs":{"Monarch":{"xref_id":"0009207"}}}


id: PBO:0077009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombomodulin","termid":"PBO:0077009"}


id: GO:0032386
data:
  {"annotated_genes":["SJAG_01311","SJAG_04312","SJAG_03453","SJAG_01166","SJAG_04343","SJAG_01805","SJAG_04464","SJAG_04509","SJAG_04597","SJAG_02592","SJAG_03048","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[94174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[101605,110762,93570,100198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[102136,90613,94132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[87660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[76403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060628"},{"annotations":[87664,91783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of substances within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01166":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032386","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0046827":null,"GO:0060628":null,"GO:1902854":null,"GO:2001135":null}}


id: PBO:0084786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial porin (voltage-dependent anion channel); outer membrane protein required for maintenance of mitochondrial osmotic stability and mitochondrial membrane permeability; couples the glutathione pools of the intermembrane space (IMS) and the cytosol; interacts with Om45 and Om14 in the outer membrane; phosphorylated; protein abundance increases in response to DNA replication stress","termid":"PBO:0084786"}


id: MONDO:0007592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"familial recurrent peripheral facial palsy","secondary_identifiers":["UMLS:C1851399","MEDGEN:342742","OMIM:134200","Orphanet:2809","GARD:16609","ICD10CM:G51.0","MESH:C565028"],"synonyms":[{"name":"facial palsy, familial recurrent peripheral","type":"related"},{"name":"familial recurrent Bell palsy","type":"exact"}],"termid":"MONDO:0007592","xrefs":{"Monarch":{"xref_id":"0007592"}}}


id: MONDO:0008067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal carcinoma, susceptibility to, 2","secondary_identifiers":["OMIM:161550","UMLS:C2750548","MEDGEN:413336"],"synonyms":[{"name":"NPCA2","type":"related"},{"name":"Npca2","type":"related"},{"name":"nasopharyngeal carcinoma, susceptibility to, 2","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0008067","xrefs":{"Monarch":{"xref_id":"0008067"}}}


id: GO:0106233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a glycosome, a membrane-bounded organelle found in organisms from the order Kinetoplastida that houses the enzymes of glycolysis.","definition_xrefs":["PMID:15539076","PMID:31341002","PMID:28426655","GOC:ach","PMID:8056787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosome organization","synonyms":[{"name":"glycosome biogenesis","type":"related"},{"name":"glycosome organisation","type":"exact"},{"name":"glycosome organization and biogenesis","type":"related"}],"termid":"GO:0106233"}


id: PBO:0089339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no go decay endonuclease Cue2","termid":"PBO:0089339"}


id: PBO:0029025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_gamma-tubulin_complex_assembly","termid":"PBO:0029025"}


id: GO:0070795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of conidiophore development, a process that leads to the formation of a conidiophore. The conidiophore is a specialized hypha that extends aerially from the growth substrate and bears conidia, or asexual spores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conidiophore development","termid":"GO:0070793"},{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"positively_regulates","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidiophore development","termid":"GO:0070795"}


id: PBO:0036547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase beta subunit Lsc2 (predicted)","termid":"PBO:0036547"}


id: FYPO:0003675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the large form of 5.8S rRNA measured in a cell is higher than normal.","definition_xrefs":["PMID:8887563","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased mature 5.8SL rRNA level","synonyms":[{"name":"increased 5.8SL rRNA level","type":"broad"},{"name":"increased mature 5.8S (L) rRNA level","type":"exact"},{"name":"increased mature 5.8SL rRNA accumulation","type":"related"},{"name":"increased mature 5.8SL rRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature 5.8SL rRNA level during vegetative growth","type":"exact"},{"name":"increased mature 5.8SL rRNA transcript level","type":"exact"}],"termid":"FYPO:0003675"}


id: MONDO:0010561
data:
  {"annotated_genes":["SJAG_01047"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85653],"is_not":false,"summary":null,"term":"MONDO:0010561"}]},"cv_name":"mondo","definition":"A rare genetic neurological disorder characterized by psychomotor and growth retardation, facial dysmorphism, digit abnormalities, and progressive skeletal changes.","definition_xrefs":["Orphanet:192"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"scoliosis","termid":"MONDO:0005392"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01047":null},"genotype_count":0,"is_obsolete":false,"name":"Coffin-Lowry syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:983","SCTID:15182000","UMLS:C0265252","NANDO:2200952","GARD:6123","MESH:D038921","OMIM:303600","MEDGEN:75556","ICD9:759.89","icd11.foundation:380089065","NANDO:1200660","MESH:C536435","DOID:3783","NCIT:C84643"],"synonyms":[{"name":"CLS","type":"exact"},{"name":"COFFIN-Lowry syndrome","type":"related"},{"name":"Coffin Lowry Syndrome","type":"exact"},{"name":"Coffin syndrome","type":"related"},{"name":"Coffin syndrome 1","type":"related"},{"name":"Coffin-Lowry syndrome","type":"exact"},{"name":"Coffin-Lowry syndrome, X-linked dominant","type":"exact"},{"name":"dwarfism, lean spastic type","type":"related"},{"name":"intellectual disability with osteocartilaginous abnormalities","type":"related"},{"name":"lean spastic dwarfism","type":"related"},{"name":"mental retardation with osteocartilaginous abnormalities","type":"related"}],"termid":"MONDO:0010561","terms_by_termid":{"MONDO:0010561":null},"xrefs":{"Monarch":{"xref_id":"0010561"}}}


id: PBO:0050849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 2","termid":"PBO:0050849"}


id: PBO:0060915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 2","termid":"PBO:0060915"}


id: PBO:0048514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor 2 pseudogene 1","termid":"PBO:0048514"}


id: GO:1903741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["GO_REF:0000059","GOC:rn","PMID:22334681","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidate phosphatase activity (obsolete GO:1903741)","synonyms":[{"name":"down regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"down regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"down regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"down regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"down regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"down-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"down-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"down-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"down-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"downregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"downregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"downregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"downregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"downregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"downregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"downregulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"inhibition of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatic acid phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"inhibition of phosphatidate phosphatase activity","type":"narrow"},{"name":"inhibition of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"inhibition of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"negative regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"negative regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"negative regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"negative regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"negative regulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903741"}


id: GO:0097575
data:
  {"annotated_genes":["SJAG_04522","SJAG_00596","SJAG_00028","SJAG_04509","SJAG_02392","SJAG_00030","SJAG_01925","SJAG_03011","SJAG_04947"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87647,95600,104403,107359,109170,113897,115913],"is_not":false,"summary":null,"term":"GO:0097575"},{"annotations":[104282,99847],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990463"}]},"cv_name":"cellular_component","definition":"The region directly beneath the plasma membrane of the lateral portion of the cell.","definition_xrefs":["GOC:mah","PMID:24146635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00596":null,"SJAG_01925":null,"SJAG_02392":null,"SJAG_03011":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lateral cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097575","terms_by_termid":{"GO:0097575":null,"GO:1990463":null}}


id: MONDO:0003009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Overproduction of aldosterone by the adrenal glands, which may lead to hypokalemia and/or hypernatremia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland hyperfunction","termid":"MONDO:0006640"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperaldosteronism","secondary_identifiers":["MEDGEN:6960","MESH:D006929","SCTID:88213004","ICD9:255.1","UMLS:C0020428","DOID:446","ICD9:255.10","EFO:0009452","icd11.foundation:1937534076","ICD10CM:E26"],"synonyms":[{"name":"primary hyperaldosteronism","type":"related"}],"termid":"MONDO:0003009","xrefs":{"Monarch":{"xref_id":"0003009"}}}


id: GO:0047661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-amino acid = a D-amino acid.","definition_xrefs":["EC:5.1.1.10","MetaCyc:AMINO-ACID-RACEMASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"amino-acid racemase activity","secondary_identifiers":["RHEA:18317"],"synonyms":[{"name":"L-amino acid racemase activity","type":"related"}],"termid":"GO:0047661"}


id: MONDO:1011437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurofibromatosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromatosis, non-human animal","secondary_identifiers":["OMIA:000716"],"termid":"MONDO:1011437","xrefs":{"Monarch":{"xref_id":"1011437"}}}


id: MONDO:0003209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary thymic carcinoma, characterized by the presence of carcinoma cells with glandular differentiation.","definition_xrefs":["NCIT:C6459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"thymus gland adenocarcinoma","secondary_identifiers":["UMLS:C1336743","DOID:4923","MEDGEN:234426"],"synonyms":[{"name":"Thymus adenocarcinoma","type":"exact"},{"name":"adenocarcinoma of Thymus","type":"exact"},{"name":"adenocarcinoma of the Thymus","type":"exact"},{"name":"thymic adenocarcinoma","type":"exact"},{"name":"thymus adenocarcinoma","type":"exact"}],"termid":"MONDO:0003209","xrefs":{"Monarch":{"xref_id":"0003209"}}}


id: GO:0002687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of leukocyte migration.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"positively_regulates","term_name":"leukocyte migration","termid":"GO:0050900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte migration","synonyms":[{"name":"activation of leukocyte migration","type":"narrow"},{"name":"positive regulation of immune cell migration","type":"exact"},{"name":"positive regulation of leucocyte migration","type":"exact"},{"name":"stimulation of leukocyte migration","type":"narrow"},{"name":"up regulation of leukocyte migration","type":"exact"},{"name":"up-regulation of leukocyte migration","type":"exact"},{"name":"upregulation of leukocyte migration","type":"exact"}],"termid":"GO:0002687"}


id: PBO:0112515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF181 like","termid":"PBO:0112515"}


id: GO:0030054
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella.","definition_xrefs":["PMID:26820516","GOC:aruk","GOC:bc","GOC:mah","ISBN:0198506732","PMID:28096264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell junction","secondary_identifiers":["Wikipedia:Cell_junction"],"termid":"GO:0030054"}


id: FYPO:0001977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall polysaccharide level","termid":"FYPO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cell wall galactomannan level","synonyms":[{"name":"increased cell wall galactomannan accumulation","type":"related"},{"name":"increased cell wall galactomannan level during mitotic cell cycle","type":"related"},{"name":"increased cell wall galactomannan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001977"}


id: MOD:01050
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridyl alanyl","termid":"MOD:01050"}


id: PBO:0066646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 4","termid":"PBO:0066646"}


id: PBO:0068630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 10, pseudogene","termid":"PBO:0068630"}


id: FYPO:0002888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the mitotic cell cycle is arrested after the septum has formed, but before cells have separated, under conditions where arrest does not normally occur.","definition_xrefs":["PMID:8978671","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"mitotic cell cycle arrest before cell separation","synonyms":[{"name":"cell cycle arrest before cell separation during mitotic cell cycle","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation after cytokinesis","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation during vegetative growth","type":"exact"},{"name":"mitotic cell cycle arrest before mitotic cytokinetic cell separation","type":"exact"}],"termid":"FYPO:0002888"}


id: PBO:0041079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRICK1 subunit of SCAR/WAVE actin nucleating complex","termid":"PBO:0041079"}


id: PBO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine salvage haloacid dehalogenase-like hydrolase (predicted)","termid":"PBO:0001675"}


id: MONDO:1010296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marfan syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marfan syndrome, non-human animal","secondary_identifiers":["OMIA:000628"],"termid":"MONDO:1010296","xrefs":{"Monarch":{"xref_id":"1010296"}}}


id: PBO:0036484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase involved in endocytosis Cki1","termid":"PBO:0036484"}


id: GO:0044825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the covalent insertion of processed 3'-viral DNA ends into host chromosomal DNA by a trans-esterification reaction.","definition_xrefs":["PMID:22580823"],"gene_count":0,"genotype_count":0,"name":"obsolete retroviral strand transfer activity (obsolete GO:0044825)","synonyms":[{"name":"strand transfer reaction","type":"exact"}],"termid":"GO:0044825"}


id: PBO:0034654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_boundary_element_IRC1L","termid":"PBO:0034654"}


id: GO:1905447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial ATP synthesis coupled electron transport.","definition_xrefs":["GOC:PARL","GOC:bc","GO_REF:0000058","GOC:TermGenie","PMID:23707074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidative phosphorylation","termid":"GO:0090324"},{"relation_name":"is_a","term_name":"regulation of mitochondrial ATP synthesis coupled electron transport","termid":"GO:1905446"},{"relation_name":"negatively_regulates","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial ATP synthesis coupled electron transport","synonyms":[{"name":"down regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"down-regulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"downregulation of mitochondrial ATP synthesis coupled electron transport","type":"exact"},{"name":"inhibition of mitochondrial ATP synthesis coupled electron transport","type":"narrow"}],"termid":"GO:1905447"}


id: PBO:0060174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTUS2 antisense RNA 1","termid":"PBO:0060174"}


id: MONDO:0031031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 77","secondary_identifiers":["OMIM:619988","DOID:0081236","MEDGEN:1823966","UMLS:C5774193"],"synonyms":[{"name":"MRT77","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 77","type":"exact"}],"termid":"MONDO:0031031","xrefs":{"Monarch":{"xref_id":"0031031"}}}


id: MONDO:0014941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, with impaired proprioception and touch","secondary_identifiers":["UMLS:C4310692","MEDGEN:934659","OMIM:617146"],"synonyms":[{"name":"DAIPT","type":"exact"},{"name":"arthrogryposis, distal, with impaired proprioception and touch","type":"exact"},{"name":"arthrogryposis, distal, with impaired proprioception and touch; DAIPT","type":"exact"}],"termid":"MONDO:0014941","xrefs":{"Monarch":{"xref_id":"0014941"}}}


id: PBO:0067194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 258, pseudogene","termid":"PBO:0067194"}


id: GO:0016841
data:
  {"annotated_genes":["SJAG_00830","SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008721"},{"annotations":[77318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004794"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of ammonia by the cleavage of a carbon-nitrogen bond or the reverse reaction with ammonia as a substrate.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00830":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ammonia-lyase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:4.3.1.-"],"termid":"GO:0016841","terms_by_termid":{"GO:0004794":null,"GO:0008721":null}}


id: PBO:0076066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm-tail PG-rich repeat containing 3","termid":"PBO:0076066"}


id: PBO:0064460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha 1, catalytic subunit","termid":"PBO:0064460"}


id: MONDO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coenzyme Q10 deficiency disease (obsolete MONDO:0000423)","termid":"MONDO:0000423","xrefs":{"Monarch":{"xref_id":"0000423"}}}


id: PBO:0013786
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha1,2-Mannosyltransferase Homolog","termid":"PBO:0013786"}


id: SO:0000668
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an EST sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST_match","synonyms":[{"name":"EST match","type":"exact"}],"termid":"SO:0000668"}


id: PR:O14353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A biotin--protein ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12835:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin--protein ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.07c","secondary_identifiers":["UniProtKB:O14353"],"synonyms":[{"name":"SPBC30D10.07c","type":"related"},{"name":"Spom972h-HLCS","type":"exact"},{"name":"biotin apo-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14353"}


id: PBO:0038830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 3","termid":"PBO:0038830"}


id: PBO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIG4 syndrome","termid":"PBO:0005211"}


id: PBO:0015228
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CET1","termid":"PBO:0015228"}


id: PBO:0001584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Ssr2","termid":"PBO:0001584"}


id: GO:0050439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + glyoxylate + H+ = 2-hydroxy-3-oxoadipate + CO2.","definition_xrefs":["EC:2.2.1.5","RHEA:14341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016744","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-3-oxoadipate synthase activity","secondary_identifiers":["MetaCyc:2-HYDROXY-3-OXOADIPATE-SYNTHASE-RXN","KEGG_REACTION:R00474"],"synonyms":[{"name":"2-hydroxy-3-oxoadipate glyoxylate-lyase (carboxylating) activity","type":"related"},{"name":"2-hydroxy-3-oxoadipate synthetase activity","type":"related"},{"name":"2-oxoglutarate:glyoxylate succinaldehydetransferase (decarboxylating)","type":"related"},{"name":"alpha-ketoglutaric-glyoxylic carboligase activity","type":"related"},{"name":"oxoglutarate: glyoxylate carboligase activity","type":"related"},{"name":"oxoglutarate:glyoxylate carboligase activity","type":"related"}],"termid":"GO:0050439"}


id: MONDO:0008545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"beta thalassemia","termid":"MONDO:0019402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"thalassemia, beta+, silent allele","secondary_identifiers":["MEDGEN:349988","UMLS:C1861232","OMIM:187550","MESH:C566065"],"synonyms":[{"name":"thalassemia, beta+, silent allele","type":"exact"}],"termid":"MONDO:0008545","xrefs":{"Monarch":{"xref_id":"0008545"}}}


id: MONDO:0012572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sakoda complex","secondary_identifiers":["MESH:C567055","MEDGEN:370271","UMLS:C1970485","OMIM:610871"],"synonyms":[{"name":"Sakoda complex","type":"exact"},{"name":"Sakoda spectrum","type":"related"},{"name":"sphenoethmoidal encephalomeningocele agenesis of the corpus callosum and cleft lip/palate","type":"related"},{"name":"sphenoethmoidal encephalomeningocele, agenesis of the corpus callosum, and cleft Lip/palate","type":"related"}],"termid":"MONDO:0012572","xrefs":{"Monarch":{"xref_id":"0012572"}}}


id: PBO:0114750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic cohesin unloading complex subunit Pds5","termid":"PBO:0114750"}


id: PBO:0059916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 2","termid":"PBO:0059916"}


id: GO:0051734
data:
  {"annotated_genes":["SJAG_02680","SJAG_01979","SJAG_01791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87891,70556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046404"},{"annotations":[93236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5'-dephosphopolynucleotide = ADP + 5'-phosphopolynucleotide. The polynucleotide may be DNA or RNA.","definition_xrefs":["EC:2.7.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051731"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01791":null,"SJAG_01979":null,"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent polynucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent polynucleotide kinase activity","type":"related"},{"name":"polynucleotide kinase activity","type":"broad"}],"termid":"GO:0051734","terms_by_termid":{"GO:0046404":null,"GO:0051736":null}}


id: GO:0030042
data:
  {"annotated_genes":["SJAG_03380","SJAG_01993","SJAG_00279","SJAG_02700","SJAG_01894","SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69765,73286],"is_not":false,"summary":null,"term":"GO:0030042"},{"annotations":[92089,79827,75443,78930],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Disassembly of actin filaments by the removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"},{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"actin filament depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin depolymerization","type":"exact"},{"name":"actin depolymerizing activity","type":"related"}],"termid":"GO:0030042","terms_by_termid":{"GO:0030042":null,"GO:0051016":null}}


id: PBO:0028833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028833"}


id: GO:0102639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 13-desoxypaxilline + NADPH + O2 + H+ = paspalicine + NADP + 2 H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete paspalicine synthase activity (obsolete GO:0102639)","termid":"GO:0102639"}


id: PBO:0086737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086737"}


id: FYPO:0007197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:30602572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased mitochondrial fission","synonyms":[{"name":"increased frequency of mitochondrial fission","type":"exact"},{"name":"increased mitochondrial division","type":"exact"},{"name":"increased mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial fission during vegetative growth","type":"exact"},{"name":"increased mitochondrial proliferation","type":"related"}],"termid":"FYPO:0007197"}


id: PBO:0034511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton_during_mitotic_interphase","termid":"PBO:0034511"}


id: FYPO:0002567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNAs transcribed from the centromere outer repeat region measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric RNA level during vegetative growth","termid":"FYPO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal centromeric outer repeat transcript level","synonyms":[{"name":"normal accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"normal accumulation of centromeric outer repeat transcripts during vegetative growth","type":"exact"},{"name":"normal accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"normal centromeric outer repeat transcript accumulation","type":"related"},{"name":"normal centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"normal centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"normal level of centromeric outer repeat transcripts","type":"exact"}],"termid":"FYPO:0002567"}


id: GO:0097294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of XMP, xanthosine monophosphate, from simpler precursors.","definition_xrefs":["PMID:27590927","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"XMP biosynthetic process","termid":"GO:0097293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"'de novo' XMP biosynthetic process","synonyms":[{"name":"'de novo' XMP anabolism","type":"exact"},{"name":"'de novo' XMP biosynthesis","type":"exact"},{"name":"'de novo' XMP formation","type":"exact"},{"name":"'de novo' XMP synthesis","type":"exact"}],"termid":"GO:0097294"}


