# terms

id: MONDO:0012016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of multiple capillary malformations (CM) with an arteriovenous malformation (AVM) and arteriovenous fistulas.","definition_xrefs":["Orphanet:137667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"capillary malformation","termid":"MONDO:0016231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capillary malformation-arteriovenous malformation syndrome","secondary_identifiers":["MEDGEN:334007","ICD9:747.69","MESH:C564254","SCTID:703533007","NCIT:C179668","GARD:11904","OMIMPS:608354","UMLS:C1842180"],"synonyms":[{"name":"CM-AVM","type":"exact"},{"name":"CM-AVM syndrome","type":"related"},{"name":"CMAVM","type":"related"},{"name":"capillary malformation without arteriovenous malformation","type":"related"},{"name":"capillary malformation-arteriovenous malformation","type":"related"}],"termid":"MONDO:0012016","xrefs":{"Monarch":{"xref_id":"0012016"}}}


id: PBO:0001279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid16 (predicted)","termid":"PBO:0001279"}


id: GO:0004071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-aspartate + NH3 = AMP + diphosphate + L-asparagine.","definition_xrefs":["EC:6.3.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia ligase activity","termid":"GO:0016211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"aspartate-ammonia ligase activity","secondary_identifiers":["MetaCyc:ASNSYNA-RXN","RHEA:11372"],"synonyms":[{"name":"L-asparagine synthetase activity","type":"related"},{"name":"L-aspartate:ammonia ligase (AMP-forming)","type":"related"},{"name":"asparagine synthetase activity","type":"related"}],"termid":"GO:0004071"}


id: PBO:0039712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A4","termid":"PBO:0039712"}


id: PBO:0044562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 3","termid":"PBO:0044562"}


id: GO:0001712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell differentiation process that results in commitment of a cell to become part of the ectoderm.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in formation of primary germ layer","termid":"GO:0060795"},{"relation_name":"part_of","term_name":"ectoderm formation","termid":"GO:0001705"},{"relation_name":"part_of","term_name":"ectodermal cell differentiation","termid":"GO:0010668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal cell fate commitment","synonyms":[{"name":"ectoderm cell fate commitment","type":"exact"}],"termid":"GO:0001712"}


id: PBO:0034616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_recombination_double-strand_break_repair","termid":"PBO:0034616"}


id: PBO:0089304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic diphosphatase","termid":"PBO:0089304"}


id: GO:0060438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trachea over time, from its formation to the mature structure. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea development","termid":"GO:0060438"}


id: PATO:0000786
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000786 neural function value (obsolete PATO:0000786)","termid":"PATO:0000786"}


id: PBO:0055118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2537","termid":"PBO:0055118"}


id: MONDO:0010162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tyrosinemia type 3 is an inborn error of tyrosine metabolism characterized by mild hypertyrosinemia and increased urinary excretion of 4-hydroxyphenylpyruvate, 4-hydroxyphenyllactate and 4-hydroxyphenylacetate.","definition_xrefs":["Orphanet:69723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosinemia","termid":"MONDO:0004741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"tyrosinemia type III","secondary_identifiers":["SCTID:415764005","NANDO:1200790","GARD:10332","DOID:0050727","MedDRA:10069461","MEDGEN:78694","NANDO:2200470","OMIM:276710","ICD9:270.2","UMLS:C0268623"],"synonyms":[{"name":"4-Hydroxyphenylpyruvate dioxygenase deficiency","type":"related"},{"name":"4-Hydroxyphenylpyruvic acid oxidase deficiency","type":"related"},{"name":"4-alpha hydroxyphenylpyruvate dioxygenase deficiency","type":"related"},{"name":"4-alpha hydroxyphenylpyruvic acid oxidase deficiency","type":"related"},{"name":"TYRSN3","type":"related"},{"name":"tyrosinemia due to 4-hydroxyphenylpyruvate dioxygenase deficiency","type":"exact"},{"name":"tyrosinemia due to 4-hydroxyphenylpyruvic acid oxidase deficiency","type":"exact"},{"name":"tyrosinemia due to HPD deficiency","type":"exact"},{"name":"tyrosinemia type 3","type":"related"},{"name":"tyrosinemia type III","type":"exact"},{"name":"tyrosinemia, type 3","type":"related"},{"name":"tyrosinemia, type III","type":"related"}],"termid":"MONDO:0010162","xrefs":{"Monarch":{"xref_id":"0010162"}}}


id: GO:0048831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot development.","definition_xrefs":["PMID:16361392","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system development","synonyms":[{"name":"regulation of shoot development","type":"exact"}],"termid":"GO:0048831"}


id: GO:0044829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism activates or increases the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation by host of viral process","termid":"GO:0044794"},{"relation_name":"is_a","term_name":"modulation by host of viral genome replication","termid":"GO:0044827"},{"relation_name":"positively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by host of viral genome replication","termid":"GO:0044829"}


id: GO:0050254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + rhodopsin = ADP + phosphorhodopsin.","definition_xrefs":["PMID:14654303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor kinase activity","termid":"GO:0004703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0003674","GO:0003824","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"rhodopsin kinase activity","secondary_identifiers":["Reactome:R-HSA-2581474","RHEA:23356","MetaCyc:2.7.11.14-RXN","EC:2.7.11.14"],"synonyms":[{"name":"GPCR kinase 1 activity","type":"narrow"},{"name":"cone opsin kinase activity","type":"narrow"},{"name":"opsin kinase (phosphorylating) activity","type":"related"},{"name":"opsin kinase activity","type":"related"},{"name":"rhodopsin kinase (phosphorylating) activity","type":"exact"}],"termid":"GO:0050254"}


id: MONDO:0007034
data:
  {"annotated_genes":["SJAG_03484","SJAG_04092"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85913,85914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013895"}]},"cv_name":"mondo","definition":"Adams-Oliver Syndrome (AOS) is a rare disorder characterized by the combination of congenital limb abnormalities and scalp defects, often accompanied by skull ossification defects.","definition_xrefs":["Orphanet:974"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mixed dermis disorder","termid":"MONDO:0019294"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03484":null,"SJAG_04092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Adams-Oliver syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:745972142","GARD:5739","UMLS:C0265268","NORD:731","MEDGEN:78544","MESH:C538225","DOID:0060227","OMIMPS:100300","ICD9:759.89","SCTID:34748004"],"synonyms":[{"name":"AOS","type":"exact"},{"name":"Adams Oliver syndrome","type":"exact"},{"name":"congenital scalp defects with distal limb anomalies","type":"exact"},{"name":"congenital scalp defects with distal limb reduction anomalies","type":"exact"},{"name":"limb scalp and skull defects","type":"related"},{"name":"limb, scalp and skull defects","type":"exact"}],"termid":"MONDO:0007034","terms_by_termid":{"MONDO:0013895":null},"xrefs":{"Monarch":{"xref_id":"0007034"}}}


id: PBO:0050544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPS1 antisense RNA 1","termid":"PBO:0050544"}


id: PBO:0082609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that stimulates HSP70 protein Ssc1p ATPase activity; involved in protein folding/refolding in the mitochodrial matrix; required for proteolysis of misfolded proteins; member of the HSP40 (DnaJ) family of chaperones","termid":"PBO:0082609"}


id: MOD:00630
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:319","PubMed:9328283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C3-H2-O adduct (+54 amu) of malondialdehyde with lysine or methylglyoxal with arginine.","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:00630"}


id: FYPO:0006652
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a DNA/DNA annealing activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal DNA/DNA annealing activity","termid":"FYPO:0005438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000653","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased DNA/DNA annealing activity","termid":"FYPO:0006652"}


id: MONDO:0008218
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86303],"is_not":false,"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"Benign chronic familial pemphigus of Hailey-Hailey is characterized by rhagades mostly located in the armpits, inguinal and perineal folds (scrotum, vulva).","definition_xrefs":["Orphanet:2841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus","termid":"MONDO:0006594"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"Hailey-Hailey disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200631","MESH:D016506","GARD:6559","NORD:1211","icd11.foundation:818400628","DOID:0050429","NCIT:C82865","OMIM:169600","UMLS:C0085106","SCTID:79468000","MEDGEN:43100"],"synonyms":[{"name":"BCPM","type":"related"},{"name":"Hailey-Hailey disease","type":"exact"},{"name":"benign chronic familial pemphigus of Hailey-Hailey","type":"exact"},{"name":"benign chronic pemphigus","type":"exact"},{"name":"benign familial pemphigus","type":"related"},{"name":"familial benign chronic pemphigus","type":"related"},{"name":"familial benign pemphigus","type":"related"},{"name":"pemphigus, benign familial","type":"exact"}],"termid":"MONDO:0008218","terms_by_termid":{"MONDO:0008218":null},"xrefs":{"Monarch":{"xref_id":"0008218"}}}


id: GO:0015968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A specific global change in the metabolism of a bacterial cell (the downregulation of nucleic acid and protein synthesis, and the simultaneous upregulation of protein degradation and amino acid synthesis) as a result of starvation.","definition_xrefs":["GOC:jl","ISBN:0124325653","PMID:11282471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stringent response","secondary_identifiers":["Wikipedia:Stringent_response"],"termid":"GO:0015968"}


id: FYPO:0001851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ferrous iron import is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal ferrous iron import","synonyms":[{"name":"normal ferrous ion import","type":"exact"},{"name":"normal ferrous ion import across plasma membrane","type":"exact"},{"name":"normal ferrous iron import during mitotic cell cycle","type":"related"},{"name":"normal ferrous iron import during vegetative growth","type":"exact"},{"name":"normal ferrous iron import into cell","type":"exact"}],"termid":"FYPO:0001851"}


id: MOD:00623
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"fucosylated biantennary (-2 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Fucosylated biantennary (-2 galactose)","type":"related"},{"name":"dHex(1)Hex(3)HexNAc(4)","type":"related"}],"termid":"MOD:00623"}


id: GO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a protein or protein complex, to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, protein binding (obsolete GO:0000988)","synonyms":[{"name":"protein binding transcription factor activity","type":"exact"},{"name":"transcription factor activity","type":"broad"}],"termid":"GO:0000988"}


id: PBO:0108593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG2 AAA ATPase homolog A","termid":"PBO:0108593"}


id: PBO:0069623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 900, pseudogene","termid":"PBO:0069623"}


id: GO:0047970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanidinoacetate + H2O = glycine + urea.","definition_xrefs":["RHEA:23268","EC:3.5.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"guanidinoacetase activity","secondary_identifiers":["KEGG_REACTION:R00775","MetaCyc:GUANIDINOACETASE-RXN"],"synonyms":[{"name":"glycocyaminase activity","type":"related"},{"name":"guanidinoacetate amidinohydrolase activity","type":"related"}],"termid":"GO:0047970"}


id: PBO:0036526
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jalili syndrome","termid":"PBO:0036526"}


id: GO:0015298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + cation(in) = solute(in) + cation(out).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:monoatomic cation antiporter activity (obsolete GO:0015298)","synonyms":[{"name":"solute:cation antiporter activity","type":"exact"}],"termid":"GO:0015298"}


id: MONDO:0800199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Angelman syndrome chromosome region (obsolete MONDO:0800199)","termid":"MONDO:0800199","xrefs":{"Monarch":{"xref_id":"0800199"}}}


id: GO:2000862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrogen secretion","termid":"GO:2000861"},{"relation_name":"negatively_regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of estrogen secretion","synonyms":[{"name":"negative regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000862"}


id: PBO:0063672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 1","termid":"PBO:0063672"}


id: MONDO:0004319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An undifferentiated small cell carcinoma that arises from the ovary and is associated with hypercalcemia. Electron microscopic studies show neurosecretory granules are either absent or, when present, are in small numbers.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian small cell carcinoma","termid":"MONDO:0003795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"hypercalcemic type ovarian small cell carcinoma","secondary_identifiers":["MEDGEN:275294","NCIT:C40439","UMLS:C1518736","DOID:7651"],"synonyms":[{"name":"SCCOHT","type":"exact"},{"name":"ovarian small cell carcinoma, hypercalcemic type","type":"exact"}],"termid":"MONDO:0004319","xrefs":{"Monarch":{"xref_id":"0004319"}}}


id: MONDO:0014075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYGB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 39 multiple types","secondary_identifiers":["MEDGEN:815130","OMIM:615188","DOID:0110236","UMLS:C3808800"],"synonyms":[{"name":"CRYGB early-onset non-syndromic cataract","type":"exact"},{"name":"CTRCT39","type":"exact"},{"name":"autosomal dominant cataract 39 multiple types","type":"exact"},{"name":"cataract 39, multiple types","type":"related"},{"name":"cataract 39, multiple types, autosomal dominant","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYGB","type":"exact"}],"termid":"MONDO:0014075","xrefs":{"Monarch":{"xref_id":"0014075"}}}


id: PBO:0068532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 133, pseudogene","termid":"PBO:0068532"}


id: GO:0047170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate + sinapoyl-CoA = 2-O-sinapoyl-D-glucarate + CoA.","definition_xrefs":["EC:2.3.1.131","RHEA:23308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glucarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02899","MetaCyc:2.3.1.131-RXN"],"synonyms":[{"name":"sinapoyl-CoA:glucarate O-(hydroxycinnamoyl)transferase activity","type":"related"}],"termid":"GO:0047170"}


id: PBO:0056946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10b","termid":"PBO:0056946"}


id: MONDO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube carcinoma (obsolete MONDO:0002157)","termid":"MONDO:0002157","xrefs":{"Monarch":{"xref_id":"0002157"}}}


id: GO:0036050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a peptidyl-lysine residue by the addition of a succinyl group (CO-CH2-CH2-CO) to form N6-succinyl-L-lysine.","definition_xrefs":["GOC:jsg","RESID:AA0545","PMID:21151122","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine succinylation (obsolete GO:0036050)","termid":"GO:0036050"}


id: MONDO:0000544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from a mucosal site.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-cutaneous melanoma","termid":"MONDO:0006320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucosal melanoma","secondary_identifiers":["NCIT:C114828","MEDGEN:857816","UMLS:C3898222","DOID:0050929"],"synonyms":[{"name":"mucosal melanoma","type":"exact"}],"termid":"MONDO:0000544","xrefs":{"Monarch":{"xref_id":"0000544"}}}


id: GO:0047469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-carboxymethyl-4-methylbut-2-en-1,4-olide = 4-carboxymethyl-3-methylbut-2-en-1,4-olide.","definition_xrefs":["EC:5.4.99.14","RHEA:19237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"4-carboxymethyl-4-methylbutenolide mutase activity","secondary_identifiers":["MetaCyc:5.4.99.14-RXN","KEGG_REACTION:R04510"],"synonyms":[{"name":"4-carboxymethyl-4-methylbut-2-en-1,4-olide methylmutase activity","type":"related"},{"name":"4-methyl-2-enelactone isomerase activity","type":"related"},{"name":"4-methyl-2-enelactone methyl-isomerase activity","type":"related"},{"name":"4-methyl-3-enelactone methyl isomerase activity","type":"related"},{"name":"4-methylmuconolactone methylisomerase activity","type":"related"}],"termid":"GO:0047469"}


id: GO:1900701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of orcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"orcinol biosynthetic process","termid":"GO:0046197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of orcinol biosynthetic process","synonyms":[{"name":"regulation of orcinol anabolism","type":"exact"},{"name":"regulation of orcinol biosynthesis","type":"exact"},{"name":"regulation of orcinol formation","type":"exact"},{"name":"regulation of orcinol synthesis","type":"exact"}],"termid":"GO:1900701"}


id: MONDO:0009063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventriculomegaly-cystic kidney disease","secondary_identifiers":["Orphanet:443988","OMIM:219730","GARD:17757","MEDGEN:346584","UMLS:C1857423","DOID:0111625"],"synonyms":[{"name":"VMCKD","type":"exact"},{"name":"congenital nephrosis-cerebral ventriculomegaly syndrome","type":"exact"},{"name":"ventriculomegaly with cystic kidney disease","type":"related"}],"termid":"MONDO:0009063","xrefs":{"Monarch":{"xref_id":"0009063"}}}


id: PBO:0041762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPN1 antisense RNA 1","termid":"PBO:0041762"}


id: PBO:0071951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 1","termid":"PBO:0071951"}


id: GO:0102512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = delphinidin 3-O-beta-D-glucoside-5-O-beta-D-glucoside betaine + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102512)","termid":"GO:0102512"}


id: PBO:0080807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 3","termid":"PBO:0080807"}


id: PBO:0056831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056831"}


id: PBO:0047842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase","termid":"PBO:0047842"}


id: PBO:0062741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 8","termid":"PBO:0062741"}


id: GO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin J (PGJ(2)), a metabolite of prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["PMID:12878180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostaglandin J receptor activity","synonyms":[{"name":"PGJ receptor activity","type":"related"},{"name":"PGJ(2) receptor activity","type":"exact"}],"termid":"GO:0001785"}


id: PBO:0081035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12C","termid":"PBO:0081035"}


id: GO:0102451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferide + S-adenosyl-L-methionine = 3,4'-O-dimethylkaempferol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"kaempferide 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13937"],"termid":"GO:0102451"}


id: MONDO:0000558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spastic ataxia (obsolete MONDO:0000558)","termid":"MONDO:0000558","xrefs":{"Monarch":{"xref_id":"0000558"}}}


id: PBO:0072634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras suppressor protein 1","termid":"PBO:0072634"}


id: MONDO:0018848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retroperitoneal fibrosis (RPF) is characterized by the development of a fibrotic mass surrounding retroperitoneal structures, such as aorta, vena cava, ureters and psoas muscle.","definition_xrefs":["Orphanet:49041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"IgG4-related retroperitoneal fibrosis","secondary_identifiers":["UMLS:C0035357","GARD:9568","ICD9:593.4","NORD:1665","MESH:D012185","MedDRA:10038979","icd11.foundation:900354709","NCIT:C26876","MEDGEN:20554","SCTID:197808006"],"synonyms":[{"name":"Ormond disease","type":"exact"},{"name":"Ormond's disease","type":"related"},{"name":"Retroperitoneal Fibrosis","type":"exact"},{"name":"idiopathic retroperitoneal fibrosis","type":"exact"},{"name":"retroperitoneal fibrosis","type":"exact"}],"termid":"MONDO:0018848","xrefs":{"Monarch":{"xref_id":"0018848"}}}


id: GO:0030827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cGMP biosynthetic process (obsolete GO:0030827)","synonyms":[{"name":"down regulation of cGMP biosynthetic process","type":"exact"},{"name":"down-regulation of cGMP biosynthetic process","type":"exact"},{"name":"downregulation of cGMP biosynthetic process","type":"exact"},{"name":"inhibition of cGMP biosynthetic process","type":"narrow"},{"name":"negative regulation of cGMP anabolism","type":"exact"},{"name":"negative regulation of cGMP biosynthesis","type":"exact"},{"name":"negative regulation of cGMP formation","type":"exact"},{"name":"negative regulation of cGMP synthesis","type":"exact"}],"termid":"GO:0030827"}


id: MONDO:0022932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An n-of-1 disease characterized by hearing loss, almost white hair, a psoriasiform rash with hyperkaratotic papillomata, muscle contractures, and depressed granulocyte and monocyte chemotaxis, dominant hearing loss, white hair, contractures, hyperkeratotic papillomata, and muscle contractures, and depressed granulocyte and monocyte chemotaxis. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:526579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Davenport-Donlan syndrome","secondary_identifiers":["Orphanet:3215","UMLS:C2931076","MEDGEN:443971","MESH:C535988"],"synonyms":[{"name":"Davenport Donlan syndrome","type":"related"},{"name":"dominant hearing loss, white hair, contractures, hyperkeratotic papillomata, and depressed chemotaxis","type":"related"}],"termid":"MONDO:0022932","xrefs":{"Monarch":{"xref_id":"0022932"}}}


id: PBO:0005489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec5 (predicted)","termid":"PBO:0005489"}


id: PBO:0055988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and sterile alpha motif containing 1","termid":"PBO:0055988"}


id: PBO:0055404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2834","termid":"PBO:0055404"}


id: GO:1901786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of p-cresol.","definition_xrefs":["PMID:10623531","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"p-cresol metabolic process","termid":"GO:1901784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol biosynthetic process","synonyms":[{"name":"p-cresol anabolism","type":"exact"},{"name":"p-cresol biosynthesis","type":"exact"},{"name":"p-cresol formation","type":"exact"},{"name":"p-cresol synthesis","type":"exact"}],"termid":"GO:1901786"}


id: PBO:0042364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD163 molecule","termid":"PBO:0042364"}


id: GO:0052746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing one or more phosphate groups into inositol. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol phosphorylation (obsolete GO:0052746)","synonyms":[{"name":"inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol phosphorylation","type":"narrow"}],"termid":"GO:0052746"}


id: FYPO:0005385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the first meiotic nuclear division (part of the meiotic cell cycle) is arrested in metaphase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic metaphase I","secondary_identifiers":["FYPO:0006769"],"synonyms":[{"name":"abnormal cell cycle arrest in metaphase I","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase I during meiotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase during first meiotic nuclear division","type":"exact"},{"name":"abnormal cell cycle arrest in metaphase of meiosis I","type":"exact"},{"name":"abnormal meiotic cell cycle arrest in metaphase I","type":"exact"},{"name":"abolished meiosis I metaphase/anaphase transition","type":"related"}],"termid":"FYPO:0005385"}


id: PBO:0069216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 471, pseudogene","termid":"PBO:0069216"}


id: GO:0032573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phylloquinone (vitamin K1) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin K","termid":"GO:0032571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phylloquinone","synonyms":[{"name":"response to vitamin K1","type":"exact"}],"termid":"GO:0032573"}


id: PBO:0076233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURF1 cytochrome c oxidase assembly factor","termid":"PBO:0076233"}


id: MONDO:0017021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease specific to childhood associated with a connective tissue disease (obsolete MONDO:0017021)","secondary_identifiers":["Orphanet:264704"],"synonyms":[{"name":"secondary ILD specific to childhood associated with a connective tissue disease","type":"exact"}],"termid":"MONDO:0017021","xrefs":{"Monarch":{"xref_id":"0017021"}}}


id: PBO:0039742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L4","termid":"PBO:0039742"}


id: PBO:0031664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_modification_during_vegetative_growth","termid":"PBO:0031664"}


id: MONDO:0100546
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id: MOD:02031
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(4) HexNAc(5)","definition_xrefs":["PubMed:33135055","Unimod:1519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dHex1Hex4HexNAc5 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(4) HexNAc(5)","type":"related"}],"termid":"MOD:02031"}


id: GO:0080035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of progoitrin, a 2-hydroxy-but-3-enyl glucosinolate. Glucosinolates are substituted thioglucosides found in rapeseed products and related cruciferae, and progoitrin has been implicated in causing goiters in mammals and bitter taste in cruciferous vegetables.","definition_xrefs":["PMID:11560911","PMID:18945935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-hydroxy-but-3-enyl glucosinolate biosynthetic process","synonyms":[{"name":"2-hydroxy-but-3-enyl glucosinolate anabolism","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate biosynthesis","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate formation","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate synthesis","type":"exact"},{"name":"progoitrin biosynthesis","type":"exact"},{"name":"progoitrin biosynthetic process","type":"exact"},{"name":"progoitrin synthesis","type":"exact"}],"termid":"GO:0080035"}


id: GO:0045826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of intermediate filament polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of intermediate filament polymerization and/or depolymerization (obsolete GO:0045826)","synonyms":[{"name":"positive regulation of intermediate filament polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045826"}


id: GO:0010184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone transport","termid":"GO:0009914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cytokinin transport","termid":"GO:0010184"}


id: PBO:0072745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7 pseudogene 1","termid":"PBO:0072745"}


id: PBO:0026816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_nitrogen_starvation","termid":"PBO:0026816"}


id: PBO:0077071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THY1 antisense RNA 1","termid":"PBO:0077071"}


id: PBO:0067335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 428, pseudogene","termid":"PBO:0067335"}


id: PBO:0084378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-ornithine transaminase (OTAse); catalyzes the second step of arginine degradation, expression is dually-regulated by allophanate induction and a specific arginine induction process; not nitrogen catabolite repression sensitive; protein abundance increases in response to DNA replication stress; human homolog OAT complements yeast null mutant","termid":"PBO:0084378"}


id: PBO:0057747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1827","termid":"PBO:0057747"}


id: PBO:0058493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5688","termid":"PBO:0058493"}


id: GO:0030555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"RNA modification guide activity","termid":"GO:0030555"}


id: PBO:0087153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease; required for maturation of the RNA component of RNase MRP; functions redundantly with Rnh70p and Rex2p in processing of U5 snRNA and RNase P RNA; member of RNase D family of exonucleases","termid":"PBO:0087153"}


id: PBO:0042684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein gamma","termid":"PBO:0042684"}


id: GO:1903415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of flavonoid from endoplasmic reticulum to plant-type vacuole.","definition_xrefs":["GOC:tb","GOC:TermGenie","PMID:25116949","GO_REF:0000078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"flavonoid transport from endoplasmic reticulum to plant-type vacuole","synonyms":[{"name":"flavonoid accumulation in vacuole","type":"related"}],"termid":"GO:1903415"}


id: GO:1900673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving olefin.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefin metabolic process","synonyms":[{"name":"olefin metabolism","type":"exact"}],"termid":"GO:1900673"}


id: GO:0042978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases ornithine decarboxylase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"ornithine decarboxylase regulator activity","termid":"GO:0042979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"ornithine decarboxylase activator activity","synonyms":[{"name":"L-ornithine carboxy-lyase activator activity","type":"narrow"}],"termid":"GO:0042978"}


id: MONDO:0032868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lessel-kubisch syndrome","secondary_identifiers":["OMIM:618681","UMLS:C5231460","MEDGEN:1684750"],"synonyms":[{"name":"LESSEL-KUBISCH SYNDROME","type":"related"},{"name":"LSKB","type":"related"}],"termid":"MONDO:0032868","xrefs":{"Monarch":{"xref_id":"0032868"}}}


id: GO:0042756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism relating to the intake of liquids, especially water.","definition_xrefs":["GOC:curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"drinking behavior","synonyms":[{"name":"drinking behaviour","type":"exact"}],"termid":"GO:0042756"}


id: GO:0090403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular senescence process associated with the dismantling of a cell as a response to oxidative stress, e.g. high levels of reactive oxygen species, such as superoxide anions, hydrogen peroxide, and hydroxyl radicals.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress-induced premature senescence","termid":"GO:0090400"},{"relation_name":"part_of","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidative stress-induced premature senescence","termid":"GO:0090403"}


id: PBO:0062469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 160 pseudogene","termid":"PBO:0062469"}


id: GO:0086007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}


id: GO:0102004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(all-trans-octaprenyl)benzene-1,2-diol + S-adenosyl-L-methionine = H+ + 2-methoxy-6-(all-trans-octaprenyl)phenol + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-octaprenyl-6-hydroxyphenol methylase activity (obsolete GO:0102004)","termid":"GO:0102004"}


id: GO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The change in form (cell shape and size) that contributes to sexual reproduction in order to facilitate direct contact between the compatible mating types in organisms that undergo pheromone-induced unidirectional conjugation.","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular morphogenesis involved in pheromone-induced unidirectional conjugation (obsolete GO:0000764)","synonyms":[{"name":"cellular morphogenesis during pheromone-induced unidirectional","type":"related"},{"name":"cellular morphogenesis involved in pheromone-induced unidirectional conjugation","type":"exact"}],"termid":"GO:0000764"}


id: PBO:0089114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import/export signal receptor","termid":"PBO:0089114"}


id: MONDO:0003865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of melanoma occurring most often on the plantar, palmar, subungual, and periungual skin. It presents as a pigmented macular lesion with irregular borders. Morphologically, it consists of atypical spindled and dendritic melanocytes. The epidermis is often hyperplastic and there is pagetoid infiltration of the epidermis by anaplastic cells.","definition_xrefs":["NCIT:C4022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous melanoma","termid":"MONDO:0005012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"acral lentiginous melanoma","secondary_identifiers":["MEDGEN:87530","SCTID:254732008","ICDO:8744/3","ONCOTREE:ACRM","UMLS:C0346037","HP:0012060","DOID:6367"],"synonyms":[{"name":"ALM","type":"related"},{"name":"acral lentiginous malignant melanoma","type":"exact"},{"name":"acral lentiginous malignant melanoma of skin","type":"related"},{"name":"acral lentiginous melanoma","type":"exact"},{"name":"acral lentiginous melanoma (disease)","type":"exact"},{"name":"acral lentiginous melanoma, malignant","type":"exact"},{"name":"acral lentiginous melanoma, malignant (morphologic abnormality)","type":"exact"},{"name":"acral melanoma","type":"related"},{"name":"malignant acral lentiginous melanoma","type":"exact"},{"name":"palmar/plantar melanoma","type":"related"},{"name":"subungual melanoma","type":"related"}],"termid":"MONDO:0003865","xrefs":{"Monarch":{"xref_id":"0003865"}}}


id: GO:0032952
data:
  {"annotated_genes":["SJAG_04668","SJAG_04462","SJAG_04659","SJAG_04666","SJAG_03705","SJAG_00610","SJAG_01255","SJAG_04771","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92184,87281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[117651,117776,92168,102597,105677,90533,105106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving (1->3)-beta-D-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan metabolic process","termid":"GO:0032950"},{"relation_name":"regulates","term_name":"(1->3)-beta-D-glucan metabolic process","termid":"GO:0006074"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01255":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of (1->3)-beta-D-glucan metabolism","type":"exact"},{"name":"regulation of 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"regulation of 1,3-beta-glucan metabolic process","type":"broad"},{"name":"regulation of 1,3-beta-glucan metabolism","type":"exact"}],"termid":"GO:0032952","terms_by_termid":{"GO:0090334":null,"GO:0140748":null}}


id: PBO:0066671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPPLY3 pseudogene 1","termid":"PBO:0066671"}


id: GO:0035402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-threonine (position 11) + ATP = histone H3-phosphothreonine (position 11) + ADP. This reaction is the addition of a phosphate group to the threonine residue at position 11 of histone H3.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0004672","GO:0003674","GO:0016301","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H3T11 kinase activity","synonyms":[{"name":"histone H3-T11 kinase activity","type":"exact"},{"name":"histone kinase activity (H3-T11 specific)","type":"exact"},{"name":"histone threonine kinase activity (H3-T11 specific)","type":"exact"},{"name":"histone-threonine kinase activity (H3-T11 specific)","type":"exact"}],"termid":"GO:0035402"}


id: MONDO:0006240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemangiopericytic neoplasm (obsolete MONDO:0006240)","termid":"MONDO:0006240","xrefs":{"Monarch":{"xref_id":"0006240"}}}


id: MONDO:0016851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome X","secondary_identifiers":["GARD:20783","Orphanet:261519","icd11.foundation:573923144","MEDGEN:1673747","UMLS:C5191056"],"synonyms":[{"name":"UPD(X)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type X","type":"exact"}],"termid":"MONDO:0016851","xrefs":{"Monarch":{"xref_id":"0016851"}}}


id: FYPO:0005498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a greater extent than normal during a cellular response to miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription from CRE promoter","termid":"FYPO:0005495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription from CRE promoter during cellular response to miconazole","synonyms":[{"name":"expression of CRE target genes increased during cellular response to miconazole","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during mitotic cell cycle","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0005498"}


id: MONDO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder affecting the sclera. Examples include inflammatory processes (e.g., scleritis and episcleritis), and degenerative processes. Primary tumors of the sclera are extremely rare.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"scleral disorder","secondary_identifiers":["MEDGEN:11345","NCIT:C79717","SCTID:33064008","DOID:11343","ICD9:379.19","UMLS:C0036412","MESH:D015422"],"synonyms":[{"name":"disease of sclera","type":"exact"},{"name":"disease or disorder of sclera","type":"exact"},{"name":"disorder of sclera","type":"exact"},{"name":"sclera disease","type":"exact"},{"name":"sclera disease or disorder","type":"exact"},{"name":"sclera disorder","type":"exact"},{"name":"scleral disorder","type":"exact"}],"termid":"MONDO:0001269","xrefs":{"Monarch":{"xref_id":"0001269"}}}


id: GO:0033351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-D-apiose, uridinediphosphoapiose, a substance composed of apiose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-D-apiose metabolic process","synonyms":[{"name":"UDP-D-apiose metabolism","type":"exact"}],"termid":"GO:0033351"}


id: PBO:0078169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta diversity 2","termid":"PBO:0078169"}


id: MONDO:0957267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with intracranial hemorrhage, seizures, and spasticity","secondary_identifiers":["OMIM:620371","MEDGEN:1841145","UMLS:C5830509"],"termid":"MONDO:0957267","xrefs":{"Monarch":{"xref_id":"0957267"}}}


id: PBO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad6 homolog, ubiquitin conjugating enzyme E2 Rhp6","termid":"PBO:0000269"}


id: MONDO:0008270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of preaxial polydactyly of fingers, a limb malformation syndrome, that is characterized by the presence of a usually opposable triphalangeal thumb with or without additional duplication of one or more skeletal components of the thumb. The thumb appearance can differ widely in shape (wedge to rectangular) or it can be deviated in the radio-ulnar plane (clinodactyly). PPD2 is also associated with systemic syndromes, including Holt-Oram syndrome and Fanconi anemia.","definition_xrefs":["Orphanet:93336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preaxial polydactyly of fingers","termid":"MONDO:0017425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a triphalangeal thumb","secondary_identifiers":["UMLS:C1868114","icd11.foundation:728781925","SCTID:715710001","MEDGEN:357423","GARD:5289","OMIM:174500"],"synonyms":[{"name":"PPD2","type":"exact"},{"name":"TPT-PS syndrome","type":"related"},{"name":"polydactyly of triphalangeal thumb","type":"related"},{"name":"polydactyly, preaxial 2","type":"related"},{"name":"polydactyly, preaxial II","type":"related"},{"name":"polydactyly, preaxial type 2","type":"exact"},{"name":"polydactyly, preaxial type II","type":"exact"},{"name":"preaxial polydactyly type 2","type":"exact"},{"name":"triphalangeal thumb","type":"related"},{"name":"triphalangeal thumb with polysyndactyly","type":"related"},{"name":"triphalangeal thumb, type i","type":"exact"},{"name":"triphalangeal thumb-polydactyly syndrome","type":"related"},{"name":"triphalangeal thumb-polysyndactyly syndrome","type":"related"}],"termid":"MONDO:0008270","xrefs":{"Monarch":{"xref_id":"0008270"}}}


id: GO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the preprophase band, a dense band of microtubules that marks the position in the cell where cytokinesis will occur in cells that perform cytokinesis by cell plate formation.","definition_xrefs":["GOC:mah","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"cytokinesis by cell plate formation","termid":"GO:0000911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"preprophase band assembly","synonyms":[{"name":"preprophase band formation","type":"related"}],"termid":"GO:0000913"}


id: FYPO:0004413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is decreased during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"decreased phosphatase activity during phosphate starvation","type":"exact"},{"name":"reduced phosphatase activity during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0004413"}


id: PBO:0042166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 27","termid":"PBO:0042166"}


id: PBO:0000727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial anion transporter (predicted)","termid":"PBO:0000727"}


id: PR:O13913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.07","synonyms":[{"name":"Spom972h-SPAC23C11.07","type":"exact"}],"termid":"PR:O13913"}


id: GO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["GOC:add","PMID:15928678","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}


id: MONDO:0030883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carpal tunnel syndrome","termid":"MONDO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"carpal tunnel syndrome 2","secondary_identifiers":["OMIM:619161","DOID:0070467","UMLS:C5436916","MEDGEN:1725962"],"synonyms":[{"name":"CTS2","type":"exact"},{"name":"carpal tunnel syndrome 2","type":"exact"}],"termid":"MONDO:0030883","xrefs":{"Monarch":{"xref_id":"0030883"}}}


id: MONDO:0012724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoinflammatory disease caused by mutations in the NLRP12 gene. It is characterized by periodic fevers beginning in the first year of life that are triggered by cold exposure. Episodes occur more than once per month.","definition_xrefs":["NCIT:C119043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cold autoinflammatory syndrome","termid":"MONDO:0018768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial cold autoinflammatory syndrome 2","secondary_identifiers":["MESH:C567090","Orphanet:247868","NANDO:2200454","MEDGEN:435869","GARD:17201","OMIM:611762","UMLS:C2673198","NANDO:2200449","DOID:0090063"],"synonyms":[{"name":"FCAS2","type":"exact"},{"name":"NALP12-associated hereditary periodic fever syndrome","type":"exact"},{"name":"NAPS12","type":"exact"},{"name":"NLRP12 familial cold autoinflammatory syndrome","type":"exact"},{"name":"NLRP12-associated hereditary periodic fever syndrome","type":"exact"},{"name":"familial cold autoinflammatory syndrome 2","type":"exact"},{"name":"familial cold autoinflammatory syndrome caused by mutation in NLRP12","type":"exact"},{"name":"familial cold autoinflammatory syndrome type 2","type":"exact"}],"termid":"MONDO:0012724","xrefs":{"Monarch":{"xref_id":"0012724"}}}


id: FYPO:0004655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to cell division site","synonyms":[{"name":"increased protein localisation to cell division site","type":"exact"},{"name":"increased protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"increased protein localization to cell division site during vegetative growth","type":"exact"},{"name":"increased protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0004655"}


id: MONDO:0017157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary hypertension","termid":"MONDO:0005149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypertension owing to lung disease and/or hypoxia","secondary_identifiers":["MEDGEN:785400","GARD:21034","ICD9:416.8","SCTID:697910001","Orphanet:275837","UMLS:C3698136"],"synonyms":[{"name":"PH due to lung disease and/or hypoxia","type":"exact"},{"name":"PH owing to lung disease and/or hypoxia","type":"exact"},{"name":"pulmonary hypertension due to lung disease and/or hypoxia","type":"exact"}],"termid":"MONDO:0017157","xrefs":{"Monarch":{"xref_id":"0017157"}}}


id: MONDO:0044635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"DIAPH1-related sensorineural hearing loss-thrombocytopenia syndrome","secondary_identifiers":["Orphanet:494444","UMLS:C5567465","MEDGEN:1798888","GARD:17904"],"synonyms":[{"name":"DIAPH1-related sensorineural hearing loss-thrombocytopenia syndrome","type":"exact"}],"termid":"MONDO:0044635","xrefs":{"Monarch":{"xref_id":"0044635"}}}


id: PBO:0073472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan beta","termid":"PBO:0073472"}


id: MONDO:0003440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bladder flat intraepithelial lesion (obsolete MONDO:0003440)","termid":"MONDO:0003440","xrefs":{"Monarch":{"xref_id":"0003440"}}}


id: PBO:0059590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 2","termid":"PBO:0059590"}


id: PBO:0084616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloprotease subunit of 19S regulatory particle; part of 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates; involved, independent of catalytic activity, in fission of mitochondria and peroxisomes; protein abundance increases in response to DNA replication stress","termid":"PBO:0084616"}


id: PBO:0029397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_nucleoplasm","termid":"PBO:0029397"}


id: GO:0000301
data:
  {"annotated_genes":["SJAG_01071","SJAG_00041","SJAG_00332","SJAG_00578"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88723,90913,109249,116576],"is_not":false,"summary":null,"term":"GO:0000301"}]},"cv_name":"biological_process","definition":"The retrograde movement of substances within the Golgi, mediated by COP I vesicles. Cis-Golgi vesicles are constantly moving forward through the Golgi stack by cisternal progression, eventually becoming trans-Golgi vesicles. They then selectively transport membrane and luminal proteins from the trans- to the medial-Golgi while leaving others behind in the trans-Golgi cisternae; similarly, they selectively move proteins from the medial- to the cis-Golgi.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-Golgi vesicle-mediated transport","termid":"GO:0006891"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00332":null,"SJAG_00578":null,"SJAG_01071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"retrograde transport, vesicle recycling within Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"retrograde (vesicle recycling within Golgi) transport","type":"exact"}],"termid":"GO:0000301","terms_by_termid":{"GO:0000301":null}}


id: PBO:0113786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4449 family conserved fungal protein, involved in cell-cell communication in N. crassa, and negative regulation of mating in C. neoformans","termid":"PBO:0113786"}


id: PBO:0040944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 15","termid":"PBO:0040944"}


id: GO:0031404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloride ion (Cl-).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chloride ion binding","synonyms":[{"name":"Cl- ion binding","type":"exact"},{"name":"chloride binding","type":"exact"}],"termid":"GO:0031404"}


id: GO:1904961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the quiescent center. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:TermGenie","GO_REF:0000084","PMID:21233333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quiescent center organization","synonyms":[{"name":"quiescent center structural organization","type":"exact"}],"termid":"GO:1904961"}


id: PBO:0055420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2850","termid":"PBO:0055420"}


id: MONDO:0012448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the ZFYVE27 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 33","secondary_identifiers":["DOID:0110784","MEDGEN:339943","OMIM:610244","MESH:C565214","UMLS:C1853251"],"synonyms":[{"name":"SPG33","type":"exact"},{"name":"ZFYVE27 hereditary spastic paraplegia","type":"exact"},{"name":"autosomal dominant spastic paraplegia 33","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in ZFYVE27","type":"exact"},{"name":"hereditary spastic paraplegia type 33","type":"exact"},{"name":"spastic paraplegia 33, autosomal dominant","type":"related"}],"termid":"MONDO:0012448","xrefs":{"Monarch":{"xref_id":"0012448"}}}


id: MONDO:0016796
data:
  {"annotated_genes":["SJAG_00885","SJAG_01524","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012792"},{"annotations":[86989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009504"},{"annotations":[86092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012791"}]},"cv_name":"mondo","definition":"Mitochondrial DNA depletion syndrome, encephalomyopathic form is a group of mitochondrial DNA maintenance syndrome diseases characterized by predominantly neuromuscular manifestations with typically infantile onset of hypotonia, lactic acidosis, psychomotor delay, progressive hyperkinetic-dystonic movement disorders, external ophtalmoplegia, sensosineural hearing loss, generalized seizures and variable renal tubular dysfunction. It may be associated with a broad range of other clinical features.","definition_xrefs":["Orphanet:254803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome, encephalomyopathic form","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4707428","MEDGEN:1637084","icd11.foundation:113380609","GARD:17225"],"synonyms":[{"name":"mtDNA depletion syndrome, encephalomyopathic form","type":"exact"}],"termid":"MONDO:0016796","terms_by_termid":{"MONDO:0009504":null,"MONDO:0012791":null,"MONDO:0012792":null},"xrefs":{"Monarch":{"xref_id":"0016796"}}}


id: PBO:0116659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 4A pseudogene 2","termid":"PBO:0116659"}


id: PBO:0031010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level","termid":"PBO:0031010"}


id: PR:O74531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof7 gene.","definition_xrefs":["UniProtKB:O74531","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.08c","synonyms":[{"name":"Spom972h-pof7","type":"exact"}],"termid":"PR:O74531"}


id: PBO:0073600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shroom family member 1","termid":"PBO:0073600"}


id: MONDO:0032659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucocutaneous ulceration, chronic","secondary_identifiers":["UMLS:C4748997","OMIM:618287","MEDGEN:1648375"],"synonyms":[{"name":"CMCU","type":"related"},{"name":"MUCOCUTANEOUS ULCERATION, CHRONIC","type":"related"}],"termid":"MONDO:0032659","xrefs":{"Monarch":{"xref_id":"0032659"}}}


id: PBO:0002712
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.11.-","termid":"PBO:0002712"}


id: GO:0140227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by serotonin binding to a seratonin receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex. Ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:27764665","PMID:25392484","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"},{"relation_name":"is_a","term_name":"ligand-gated ion channel signaling pathway","termid":"GO:1990806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"serotonin-gated cation-selective signaling pathway","synonyms":[{"name":"5-HT-gated cation-selective signaling pathway","type":"exact"},{"name":"5-HT-gated cation-selective signalling pathway","type":"exact"},{"name":"5-hydroxytryptamine-gated cation-selective signaling pathway","type":"exact"},{"name":"5-hydroxytryptamine-gated cation-selective signalling pathway","type":"exact"},{"name":"serotonin-gated cation-selective signalling pathway","type":"exact"}],"termid":"GO:0140227"}


id: PBO:0005178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase Tdp1","termid":"PBO:0005178"}


id: MONDO:0022642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoid tumor that occurs during childhood.","definition_xrefs":["NCIT:C118810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood carcinoid tumor","secondary_identifiers":["UMLS:C3899673","MEDGEN:859267","GARD:9315"],"synonyms":[{"name":"carcinoid tumor (disease) of childhood","type":"exact"},{"name":"carcinoid tumor childhood","type":"related"},{"name":"carcinoid tumour (disease) of childhood","type":"exact"},{"name":"carcinoid tumour childhood","type":"related"},{"name":"childhood carcinoid tumor","type":"exact"},{"name":"childhood carcinoid tumor (disease)","type":"exact"},{"name":"childhood carcinoid tumour (disease)","type":"exact"},{"name":"paediatric carcinoid tumour (disease)","type":"exact"},{"name":"pediatric carcinoid tumor (disease)","type":"exact"}],"termid":"MONDO:0022642","xrefs":{"Monarch":{"xref_id":"0022642"}}}


id: PBO:0090493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA-sterol acyltransferase Are1","termid":"PBO:0090493"}


id: SO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The minimal portion of the promoter required to properly initiate transcription in RNA polymerase II transcribed genes.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_II_core_promoter","synonyms":[{"name":"RNApol II core promoter","type":"exact"}],"termid":"SO:0001669"}


id: GO:0044862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein out of a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"is_a","term_name":"protein transport within plasma membrane","termid":"GO:0099632"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"protein transport out of plasma membrane raft","termid":"GO:0044862"}


id: PBO:0055945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 53","termid":"PBO:0055945"}


id: GO:0060775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) contributing to the interdigitation of cells along the mediolateral axis during gastrulation.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in gastrula mediolateral intercalation (obsolete GO:0060775)","termid":"GO:0060775"}


id: GO:0052785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The breakdown into simpler components of cellulose. Catabolism is initiated by endohydrolytic attacks on the cellulose chain, and the resulting pieces are further degraded by cellulase enzymes to produce smaller and smaller fragments.","definition_xrefs":["PMID:18035374","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellulose catabolism by endo-processive cellulases","synonyms":[{"name":"endo-processive cellulase activity","type":"related"}],"termid":"GO:0052785"}


id: PR:O94707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rxt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein rxt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.07","synonyms":[{"name":"Spom972h-rxt3","type":"exact"}],"termid":"PR:O94707"}


id: MONDO:0007580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esterase ES-2, regulator for (obsolete MONDO:0007580)","secondary_identifiers":["OMIM:133300"],"synonyms":[{"name":"esterase ES-2, regulator for","type":"exact"}],"termid":"MONDO:0007580","xrefs":{"Monarch":{"xref_id":"0007580"}}}


id: GO:0031720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a haptoglobin, any alpha2 globulin of blood plasma that can combine with free oxyhemoglobin to form a stable complex.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"haptoglobin binding","termid":"GO:0031720"}


id: PBO:0045089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 1","termid":"PBO:0045089"}


id: PBO:0042178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin A2","termid":"PBO:0042178"}


id: PBO:0071154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 19","termid":"PBO:0071154"}


id: MONDO:1040043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS1 gene.","definition_xrefs":["PMID:23847139","PMID:24026985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS1-related ciliopathy","synonyms":[{"name":"BBS1-related ciliopathy","type":"exact"}],"termid":"MONDO:1040043","xrefs":{"Monarch":{"xref_id":"1040043"}}}


id: GO:1903557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tumor necrosis factor superfamily cytokine production.","definition_xrefs":["PMID:24187568","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"positively_regulates","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"activation of TNF superfamily production","type":"related"},{"name":"activation of TNFSF cytokine production","type":"narrow"},{"name":"activation of tumor necrosis factor superfamily cytokine production","type":"narrow"},{"name":"positive regulation of TNF superfamily production","type":"related"},{"name":"positive regulation of TNFSF cytokine production","type":"exact"},{"name":"up regulation of TNF superfamily production","type":"related"},{"name":"up regulation of TNFSF cytokine production","type":"exact"},{"name":"up regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"up-regulation of TNF superfamily production","type":"related"},{"name":"up-regulation of TNFSF cytokine production","type":"exact"},{"name":"up-regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"upregulation of TNF superfamily production","type":"related"},{"name":"upregulation of TNFSF cytokine production","type":"exact"},{"name":"upregulation of tumor necrosis factor superfamily cytokine production","type":"exact"}],"termid":"GO:1903557"}


id: PBO:0063887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class P","termid":"PBO:0063887"}


id: GO:0007181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a ligand-bound type II transforming growth factor beta (TGF-beta) receptor dimer with a type I TGF-beta receptor dimer, following ligand binding, to form a heterotetrameric TGF-beta receptor complex.","definition_xrefs":["GOC:jl","Wikipedia:TGF_beta_signaling_pathway"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"transforming growth factor beta receptor signaling pathway","termid":"GO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"transforming growth factor beta receptor complex assembly","synonyms":[{"name":"TGF-beta receptor complex assembly","type":"exact"},{"name":"TGF-beta:type II receptor:type I receptor complex assembly","type":"exact"},{"name":"TGFbeta receptor complex assembly","type":"exact"}],"termid":"GO:0007181"}


id: GO:0019221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a cytokine to a receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:19295629","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cytokine-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-913531","Reactome:R-HSA-9680350","Reactome:R-HSA-9607240","Reactome:R-HSA-449147","Reactome:R-HSA-9674555"],"synonyms":[{"name":"cytokine and chemokine mediated signaling pathway","type":"exact"},{"name":"cytokine mediated signalling pathway","type":"exact"}],"termid":"GO:0019221"}


id: GO:0052190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host phagocytosis (obsolete GO:0052190)","termid":"GO:0052190"}


id: GO:0071984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results an organism remaining in reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of diapause","termid":"GO:0071982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of reproductive diapause","termid":"GO:0071984"}


id: PBO:0027807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_KT5823","termid":"PBO:0027807"}


id: PBO:0087599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; null mutant is sensitive to drug inducing secretion of vacuolar cargo; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0087599"}


id: PBO:0070742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 12","termid":"PBO:0070742"}


id: PATO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being phosphorylated to a lesser than normal extent, or less than fully.","definition_xrefs":["Wikipedia:http://en.wiktionary.org/wiki/hypophosphorylated"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"phosphorylated","termid":"PATO:0002220"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased phosphorylation","synonyms":[{"name":"hypophosporylated ","type":"exact"}],"termid":"PATO:0002222"}


id: PBO:0063789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 14","termid":"PBO:0063789"}


id: PR:O94340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C1271.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.07c","synonyms":[{"name":"Spom972h-SPBC1271.07c","type":"exact"}],"termid":"PR:O94340"}


id: FYPO:0004953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the prospore membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000121","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal prospore membrane","synonyms":[{"name":"abnormal forespore membrane","type":"exact"}],"termid":"FYPO:0004953"}


id: PBO:0063417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE2A antisense RNA 2","termid":"PBO:0063417"}


id: SO:0000931
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a guide_RNA that base-pairs to a target mRNA.","definition_xrefs":["SO:jk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guide_RNA_region","termid":"SO:0000930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anchor_region","synonyms":[{"name":"anchor region","type":"exact"}],"termid":"SO:0000931"}


id: PBO:0088679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase Fol1","termid":"PBO:0088679"}


id: MONDO:0003890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive transitional cell carcinoma that arises from the urinary bladder urothelium.","definition_xrefs":["NCIT:C27885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"},{"relation_name":"is_a","term_name":"infiltrating urothelial carcinoma","termid":"MONDO:0040678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"infiltrating bladder urothelial carcinoma","secondary_identifiers":["UMLS:C1334281","MEDGEN:233582","DOID:6477"],"synonyms":[{"name":"infiltrating bladder urothelial carcinoma","type":"exact"},{"name":"infiltrating transitional cell carcinoma of the urinary bladder","type":"exact"},{"name":"invasive bladder transitional cell carcinoma","type":"exact"},{"name":"invasive bladder urothelial carcinoma","type":"exact"},{"name":"invasive transitional cell carcinoma of the urinary bladder","type":"exact"}],"termid":"MONDO:0003890","xrefs":{"Monarch":{"xref_id":"0003890"}}}


id: GO:0120260
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A set of four specialized microtubules that originates from the basal bodies and wraps around the ciliary pocket membrane, likely supporting its distinct flask shape.","definition_xrefs":["GOC:krc","PMID:19299460","PMID:32518185","GOC:ach","DOI:10.5772/66859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary microtubule quartet","synonyms":[{"name":"ciliary MtQ","type":"exact"}],"termid":"GO:0120260"}


id: PBO:0083135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual specificity protein phosphatase; regulates growth, sporulation, and glycogen accumulation in a cAMP-dependent protein kinase cascade dependent manner; mutants are defective in 60S ribosome assembly; positively regulates pre-autophagosomal structure (PAS) formation upon nitrogen starvation or rapamycin treatment","termid":"PBO:0083135"}


id: PBO:0038927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRL1 antisense RNA 1","termid":"PBO:0038927"}


id: PBO:0060053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 41","termid":"PBO:0060053"}


id: MONDO:0045031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious diarrheal disease (obsolete MONDO:0045031)","termid":"MONDO:0045031","xrefs":{"Monarch":{"xref_id":"0045031"}}}


id: GO:1903965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monounsaturated fatty acid.","definition_xrefs":["GO_REF:0000068","GOC:hjd","PMID:16443825","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"monounsaturated fatty acid metabolic process","termid":"GO:1903964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"monounsaturated fatty acid catabolic process","synonyms":[{"name":"monounsaturated fatty acid breakdown","type":"exact"},{"name":"monounsaturated fatty acid catabolism","type":"exact"},{"name":"monounsaturated fatty acid degradation","type":"exact"}],"termid":"GO:1903965"}


id: PBO:0067893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 195","termid":"PBO:0067893"}


id: FYPO:0003906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on bleomycin","synonyms":[{"name":"normal cell population growth in presence of bleomycin","type":"exact"},{"name":"normal cell population growth on bleomycin","type":"exact"},{"name":"normal cellular response to bleomycin","type":"related"},{"name":"normal vegetative cell population growth on bleomycin","type":"exact"}],"termid":"FYPO:0003906"}


id: MONDO:0007914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar stenosis, familial","secondary_identifiers":["OMIM:152550","MESH:C563613","UMLS:C1835320","MEDGEN:372016"],"synonyms":[{"name":"lumbar stenosis, familial","type":"exact"}],"termid":"MONDO:0007914","xrefs":{"Monarch":{"xref_id":"0007914"}}}


id: MONDO:0001158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an enduring pattern of inflexibility, extreme orderliness, and perfectionism which interfere with efficiency and which may manifest in many different contexts, including work and leisure activities, financial matters, and issues of morality or ethics.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"personality disorder","termid":"MONDO:0002028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obsessive-compulsive personality disorder","secondary_identifiers":["UMLS:C0009595","ICD9:301.4","ICD10CM:F60.5","MESH:D003193","DOID:10932","SCTID:1376001","MEDGEN:40432","NCIT:C92638"],"synonyms":[{"name":"OCD","type":"exact"},{"name":"OCPD","type":"exact"},{"name":"anankastic personality disorder","type":"related"},{"name":"obsessional personality","type":"related"}],"termid":"MONDO:0001158","xrefs":{"Monarch":{"xref_id":"0001158"}}}


id: PBO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 8","termid":"PBO:0042982"}


id: MONDO:0011077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, corpus callosum dysgenesis, and cleft lip/palate","secondary_identifiers":["MESH:C537547","OMIM:601420","UMLS:C1832369","MEDGEN:330448"],"synonyms":[{"name":"corpus callosum dysgenesis, microcephaly, infantile spasm, cleft lip-palate, exophthalmos and psychomotor retardation","type":"related"},{"name":"microcephaly, corpus callosum dysgenesis and cleft lip-palate","type":"related"},{"name":"microcephaly, corpus callosum dysgenesis, and cleft lip/palate","type":"exact"},{"name":"microcephaly, facial clefting, and preaxial polydactyly","type":"related"}],"termid":"MONDO:0011077","xrefs":{"Monarch":{"xref_id":"0011077"}}}


id: PBO:0068060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 365","termid":"PBO:0068060"}


id: PBO:0036145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036145"}


id: GO:0008066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glutamate and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"glutamate receptor activity","termid":"GO:0008066"}


id: GO:0141204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dipeptide from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["PMID:38507452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"},{"relation_name":"is_a","term_name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"dipeptide transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"dipeptide export from lysosomal lumen","type":"exact"},{"name":"dipeptide export from lysosome","type":"exact"},{"name":"transmembrane dipeptide transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:0141204"}


id: GO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-prenyl-L-cysteine + O2 + H2O = a prenal + L-cysteine + H2O2.","definition_xrefs":["RHEA:53892","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"prenylcysteine oxidase activity","secondary_identifiers":["EC:1.8.3.5","MetaCyc:RXN-18932"],"synonyms":[{"name":"S-prenyl-L-cysteine:oxygen oxidoreductase activity","type":"related"},{"name":"prenylcysteine lyase activity","type":"related"}],"termid":"GO:0001735"}


id: PBO:0074605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11F","termid":"PBO:0074605"}


id: GO:0016662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","secondary_identifiers":["EC:1.7.2.-"],"termid":"GO:0016662"}


id: PBO:0049746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box transcription factor 1","termid":"PBO:0049746"}


id: MONDO:0012222
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84949],"is_not":false,"summary":null,"term":"MONDO:0012222"}]},"cv_name":"mondo","definition":"Alpha-N-acetylgalactosaminidase (NAGA) deficiency type 2 is a very rare mild adult type of NAGA deficiency with the features of angiokeratoma corporis diffusum and mild sensory neuropathy.","definition_xrefs":["Orphanet:79280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-N-acetylgalactosaminidase deficiency","termid":"MONDO:0017779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"alpha-N-acetylgalactosaminidase deficiency type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:324539","OMIM:609242","UMLS:C1836522","GARD:9161","DOID:0112319","SCTID:880065001","NANDO:1200136","icd11.foundation:266505438"],"synonyms":[{"name":"Alpha-N-acetylgalactosaminidase deficiency adult onset","type":"related"},{"name":"Alpha-N-acetylgalactosaminidase deficiency, adult-onset","type":"related"},{"name":"Alpha-N-acetylgalactosaminidase deficiency, type 2","type":"related"},{"name":"KANZAKI disease","type":"related"},{"name":"Kanzaki disease","type":"exact"},{"name":"NAGA deficiency type 2","type":"exact"},{"name":"Naga deficiency, type 2","type":"related"},{"name":"Schindler disease type 2","type":"exact"},{"name":"Schindler disease, type 2","type":"related"},{"name":"adult-onset Alpha-N-acetylgalactosaminidase deficiency","type":"exact"}],"termid":"MONDO:0012222","terms_by_termid":{"MONDO:0012222":null},"xrefs":{"Monarch":{"xref_id":"0012222"}}}


id: PBO:0011090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit Vps16 (predicted)","termid":"PBO:0011090"}


id: GO:1902359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any Notch signaling pathway that is involved in somitogenesis.","definition_xrefs":["PMID:21795391","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling pathway involved in somitogenesis","synonyms":[{"name":"N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"N signaling pathway involved in somitogenesis","type":"exact"},{"name":"N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"N signalling pathway involved in somitogenesis","type":"exact"},{"name":"Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"Notch-receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:1902359"}


id: PBO:0000345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE","termid":"PBO:0000345"}


id: PBO:0077498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 217","termid":"PBO:0077498"}


id: GO:0061806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombination within centromeric DNA.","definition_xrefs":["PMID:27697832","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA recombination at centromere","synonyms":[{"name":"regulation of centromeric recombination","type":"exact"}],"termid":"GO:0061806"}


id: PBO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergently orientated to functionally related gene","termid":"PBO:0000630"}


id: PBO:0049579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone B","termid":"PBO:0049579"}


id: MONDO:0016643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of rare bone development disorders characterized by an array of abnormalities affecting the eyes, forehead, and nose, and linked to midfacial dysraphia. The clinical picture is highly variable, but the major findings include hypertelorism, a broad nasal root, a large and bifid nasal tip, and widow's peak. Occasionally, abnormalities can include accessory nasal tags, cleft lip, ocular abnormalities (coloboma, cataract, microphthalmia), conductive hearing loss, basal encephalocele and/or agenesis of the corpus callosum. Intellectual deficit is rare and more likely to occur in cases where hypertelorism is severe or where there is extra-cranial involvement.","definition_xrefs":["Orphanet:250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"frontonasal dysplasia","secondary_identifiers":["MEDGEN:406292","SCTID:86610004","NORD:1165","OMIMPS:136760","GARD:2392","MESH:C538065","UMLS:C1876203","icd11.foundation:782645776","DOID:0081044"],"synonyms":[{"name":"FND1","type":"narrow"},{"name":"frontonasal dysplasia 1","type":"narrow"},{"name":"median cleft face syndrome","type":"exact"},{"name":"median cleft syndrome","type":"related"}],"termid":"MONDO:0016643","xrefs":{"Monarch":{"xref_id":"0016643"}}}


id: GO:1901362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organic cyclic compound.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic cyclic compound biosynthetic process (obsolete GO:1901362)","synonyms":[{"name":"organic cyclic compound anabolism","type":"exact"},{"name":"organic cyclic compound biosynthesis","type":"exact"},{"name":"organic cyclic compound formation","type":"exact"},{"name":"organic cyclic compound synthesis","type":"exact"}],"termid":"GO:1901362"}


id: RO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite-of in which the parasite is a plant, and the parasite is parasitic under natural conditions and is also photosynthetic to some degree. Hemiparasites may just obtain water and mineral nutrients from the host plant. Many obtain at least part of their organic nutrients from the host as well.","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemiparasite_of","termid":"RO:0002237"}


id: PATO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000774 bizarre gate (obsolete PATO:0000774)","termid":"PATO:0000774"}


id: PBO:0017016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster protein (predicted)","termid":"PBO:0017016"}


id: PBO:0048239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 8","termid":"PBO:0048239"}


id: GO:0009882
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119094],"is_not":false,"summary":null,"term":"GO:0009882"}]},"cv_name":"molecular_function","definition":"The function of absorbing and responding to electromagnetic radiation with a wavelength of approximately 400-470nm. The response may involve a change in conformation.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor activity","termid":"GO:0009881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"blue light photoreceptor activity","references_by_uniquename":{"PMID:23873862":null},"termid":"GO:0009882","terms_by_termid":{"GO:0009882":null}}


id: PBO:0044786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differentially expressed in FDCP 8 homolog","termid":"PBO:0044786"}


id: MONDO:1012105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"internal hydrocephalus, non-human animal","termid":"MONDO:1011843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal hydrocephalus, dog","secondary_identifiers":["OMIA:000489-9615"],"termid":"MONDO:1012105","xrefs":{"Monarch":{"xref_id":"1012105"}}}


id: PBO:0049961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 7","termid":"PBO:0049961"}


id: GO:1990372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response that results in a state of tolerance to organic acid.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete process resulting in tolerance to organic acid (obsolete GO:1990372)","termid":"GO:1990372"}


id: FYPO:0003328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule organization phenotype observed in the vegetative growth phase of the life cycle in which the orientation of cytoplasmic microtubules within a cell is abnormal during interphase of the mitotic cell cycle. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"misoriented interphase microtubules","synonyms":[{"name":"misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0003328"}


id: PATO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's exhibiting repetition of placement of its parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatial pattern","secondary_identifiers":["PATO:0000132","PATO:0001565"],"synonyms":[{"name":"distribution","type":"exact"},{"name":"pattern","type":"related"}],"termid":"PATO:0000060"}


id: MONDO:0003101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intraneural perineurioma (obsolete MONDO:0003101)","termid":"MONDO:0003101","xrefs":{"Monarch":{"xref_id":"0003101"}}}


id: MONDO:0007981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metachromatic leukodystrophy","termid":"MONDO:0018868"}],"gene_count":0,"genotype_count":0,"name":"obsolete metachromatic leukodystrophy, adult-onset, with normal arylsulfatase A (obsolete MONDO:0007981)","secondary_identifiers":["MESH:C563587","OMIM:156310"],"synonyms":[{"name":"metachromatic leukodystrophy, adult-onset, with normal arylsulfatase A","type":"exact"},{"name":"metachromatic leukodystrophy, adult-onset, with normal arylsulfatase type A","type":"exact"}],"termid":"MONDO:0007981","xrefs":{"Monarch":{"xref_id":"0007981"}}}


id: PBO:0017970
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CDC6","termid":"PBO:0017970"}


id: PBO:0076348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 14 pseudogene 1","termid":"PBO:0076348"}


id: PBO:0059672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 38","termid":"PBO:0059672"}


id: PBO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose Insensitive Transcription","termid":"PBO:0001589"}


id: PBO:0081300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 81","termid":"PBO:0081300"}


id: GO:2000184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of progesterone biosynthetic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of progesterone biosynthetic process","termid":"GO:2000182"},{"relation_name":"positively_regulates","term_name":"progesterone biosynthetic process","termid":"GO:0006701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of progesterone biosynthetic process","synonyms":[{"name":"positive regulation of progesterone anabolism","type":"exact"},{"name":"positive regulation of progesterone biosynthesis","type":"exact"},{"name":"positive regulation of progesterone formation","type":"exact"},{"name":"positive regulation of progesterone synthesis","type":"exact"}],"termid":"GO:2000184"}


id: MONDO:0013567
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85738,85739],"is_not":false,"summary":null,"term":"MONDO:0013567"}]},"cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the MYH6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:481420","OMIM:614089","DOID:0110108","GARD:15755","UMLS:C3279790","MESH:C563540"],"synonyms":[{"name":"ASD3","type":"exact"},{"name":"MYH6 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in MYH6","type":"exact"},{"name":"atrial heart septal defect type 3","type":"exact"},{"name":"atrial septal defect 3","type":"exact"},{"name":"atrial septal defect type 3","type":"exact"}],"termid":"MONDO:0013567","terms_by_termid":{"MONDO:0013567":null},"xrefs":{"Monarch":{"xref_id":"0013567"}}}


id: MONDO:0042705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostatic malacoplakia associated with prostatic abscess","secondary_identifiers":["MEDGEN:419811","MESH:C537244","UMLS:C2931457"],"synonyms":[{"name":"prostatic malacoplakia with prostatic and seminal vesicle abscess","type":"related"}],"termid":"MONDO:0042705","xrefs":{"Monarch":{"xref_id":"0042705"}}}


id: GO:0090215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of 1-phosphatidylinositol-4-phosphate 5-kinase activity (obsolete GO:0090215)","termid":"GO:0090215"}


id: PBO:0074935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 102","termid":"PBO:0074935"}


id: PBO:0085858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0085858"}


id: PR:P87152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator spt7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.11c","synonyms":[{"name":"Spom972h-spt7","type":"exact"}],"termid":"PR:P87152"}


id: GO:0048689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a growth cone in an injured axon.","definition_xrefs":["GOC:jid","GOC:dph","GOC:lm","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of growth cone in injured axon","termid":"GO:0048689"}


id: FYPO:0008193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is normal during prophase of the first meiotic nuclear division.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to pericentric heterochromatin during meiotic prophase I","termid":"FYPO:0008193"}


id: PBO:0057951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3674","termid":"PBO:0057951"}


id: PBO:0027277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_phosphorylation_during_cellular_response_to_salt_stress","termid":"PBO:0027277"}


id: PBO:0005231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1941 family protein","termid":"PBO:0005231"}


id: GO:0032591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a dendritic spine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"dendrite membrane","termid":"GO:0032590"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"dendritic spine membrane","termid":"GO:0032591"}


id: PBO:0084320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin alpha homolog; forms a dimer with karyopherin beta Kap95p to mediate import of nuclear proteins, binds the nuclear localization signal of the substrate during import; involved in cotranslational protein degradation; binds ribosome-bound nascent polypeptides; Srp1p and Sts1p couple proteasomes to nascent polypeptides emerging from the ribosome for cotranslational degradation","termid":"PBO:0084320"}


id: PBO:0088678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA processing protein Esf1","termid":"PBO:0088678"}


id: GO:0022849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when glutamate has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"ligand-gated calcium channel activity","termid":"GO:0099604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0038023","GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glutamate-gated calcium ion channel activity","termid":"GO:0022849"}


id: PBO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2C subunit","termid":"PBO:0002262"}


id: GO:0000221
data:
  {"annotated_genes":["SJAG_00212","SJAG_00136","SJAG_04955","SJAG_01817","SJAG_01397","SJAG_01447","SJAG_04015","SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60514,70904,87796,96367,98672,102422,109620,118466],"is_not":false,"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"The V1 domain of a proton-transporting V-type ATPase found in the vacuolar membrane.","definition_xrefs":["GOC:mah","PMID:16449553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase, V1 domain","termid":"GO:0033180"},{"relation_name":"part_of","term_name":"vacuolar proton-transporting V-type ATPase complex","termid":"GO:0016471"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase, V1 domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar hydrogen ion-transporting ATPase V1 domain","type":"exact"}],"termid":"GO:0000221","terms_by_termid":{"GO:0000221":null}}


id: MONDO:0957556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary veins atresia or stenosis","termid":"MONDO:0017864"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary vein atresia","secondary_identifiers":["MEDGEN:576417","Orphanet:99126","UMLS:C0344679"],"termid":"MONDO:0957556","xrefs":{"Monarch":{"xref_id":"0957556"}}}


id: GO:0008802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: betaine aldehyde + NAD+ + H2O = betaine + NADH + H+.","definition_xrefs":["EC:1.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"betaine-aldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-6797955","MetaCyc:BADH-RXN","RHEA:15305"],"synonyms":[{"name":"BADH activity","type":"related"},{"name":"BetB","type":"related"},{"name":"betaine aldehyde dehydrogenase activity","type":"related"},{"name":"betaine aldehyde oxidase activity","type":"related"},{"name":"betaine-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0008802"}


id: PBO:0056470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase like","termid":"PBO:0056470"}


id: PBO:0084048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein; negatively regulates RAS by converting it from GTP- to the GDP-bound inactive form, required for reducing cAMP levels under nutrient limiting conditions, mediates membrane association of adenylate cyclase; mutations cause catalase T deficiency, defective glycogen synthesis and defective trehalose accumulation; IRA1 has a paralog, IRA2, that arose from the whole genome duplication; defects in human homolog NF1 are associated with neurofibromatosis","termid":"PBO:0084048"}


id: GO:1902757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bis(molybdopterin guanine dinucleotide)molybdenum.","definition_xrefs":["GOC:dph","PMID:23201473","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolic process","synonyms":[{"name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolism","type":"exact"}],"termid":"GO:1902757"}


id: PBO:0073197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectin P ligand","termid":"PBO:0073197"}


id: PBO:0060517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napsin B aspartic peptidase, pseudogene","termid":"PBO:0060517"}


id: GO:0045558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of TRAIL-R1 (TNF-related apoptosis inducing ligand receptor 1), which engages a caspase-dependent apoptotic pathway.","definition_xrefs":["GOC:go_curators","PMID:9311998"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAIL receptor 1 biosynthetic process (obsolete GO:0045558)","synonyms":[{"name":"TRAIL receptor 1 anabolism","type":"exact"},{"name":"TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"TRAIL receptor 1 formation","type":"exact"},{"name":"TRAIL receptor 1 synthesis","type":"exact"},{"name":"tumor necrosis factor receptor superfamily member 10A biosynthetic process","type":"exact"}],"termid":"GO:0045558"}


id: PBO:0041422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 34","termid":"PBO:0041422"}


id: GO:0031707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an endothelin A receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"endothelin A receptor binding","synonyms":[{"name":"endothelin A receptor ligand","type":"narrow"},{"name":"endothelin-1 receptor binding","type":"exact"}],"termid":"GO:0031707"}


id: MONDO:1012670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lysosomal storage disorder that occurs in dogs due to a mutation in the NAGLU gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis IIIB, dog","secondary_identifiers":["OMIA:001342-9615"],"synonyms":[{"name":"Sanfilippo syndrome type B, dog","type":"related"}],"termid":"MONDO:1012670","xrefs":{"Monarch":{"xref_id":"1012670"}}}


id: GO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose(out) + Na+(out) = D-glucose(in) + Na+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose:sodium symporter activity","termid":"GO:0005412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"low-affinity D-glucose:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-429567"],"synonyms":[{"name":"low-affinity glucose-sodium cotransporter activity","type":"broad"},{"name":"low-affinity glucose:sodium symporter activity","type":"exact"}],"termid":"GO:0005362"}


id: PBO:0072534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 64","termid":"PBO:0072534"}


id: PBO:0091164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit K","termid":"PBO:0091164"}


id: MONDO:0014784
data:
  {"annotated_genes":["SJAG_04500"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85549],"is_not":false,"summary":null,"term":"MONDO:0014784"}]},"cv_name":"mondo","definition":"Severe hypotonia-psychomotor developmental delay-strabismus-cardiac septal defect syndrome is a rare, genetic, non-dystrophic congenital myopathy disorder characterized by a neonatal-onset of severe generalized hypotonia associated with mild psychomotor delay, congenital strabismus with abducens nerve palsy, and atrial and/or ventricular septal defects. Cryptorchidism is commonly reported in male patients and muscle biopsy typically reveals increased variability in muscle fiber size.","definition_xrefs":["Orphanet:467176"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04500":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"severe hypotonia-psychomotor developmental delay-strabismus-cardiac septal defect syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:902080","GARD:17840","OMIM:616816","UMLS:C4225196"],"synonyms":[{"name":"IHPMR","type":"exact"},{"name":"hypotonia, infantile, with psychomotor retardation","type":"exact"}],"termid":"MONDO:0014784","terms_by_termid":{"MONDO:0014784":null},"xrefs":{"Monarch":{"xref_id":"0014784"}}}


id: PBO:0057137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 218-2","termid":"PBO:0057137"}


id: GO:1901189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ephrin receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of ephrin receptor signaling pathway","termid":"GO:1901187"},{"relation_name":"positively_regulates","term_name":"ephrin receptor signaling pathway","termid":"GO:0048013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ephrin receptor signaling pathway","synonyms":[{"name":"activation of Eph receptor signaling pathway","type":"exact"},{"name":"activation of Eph receptor signalling pathway","type":"exact"},{"name":"activation of ephrin receptor signaling pathway","type":"narrow"},{"name":"positive regulation of Eph receptor signaling pathway","type":"exact"},{"name":"positive regulation of Eph receptor signalling pathway","type":"exact"},{"name":"up regulation of Eph receptor signaling pathway","type":"exact"},{"name":"up regulation of Eph receptor signalling pathway","type":"exact"},{"name":"up regulation of ephrin receptor signaling pathway","type":"exact"},{"name":"up-regulation of Eph receptor signaling pathway","type":"exact"},{"name":"up-regulation of Eph receptor signalling pathway","type":"exact"},{"name":"up-regulation of ephrin receptor signaling pathway","type":"exact"},{"name":"upregulation of Eph receptor signaling pathway","type":"exact"},{"name":"upregulation of Eph receptor signalling pathway","type":"exact"},{"name":"upregulation of ephrin receptor signaling pathway","type":"exact"}],"termid":"GO:1901189"}


id: PR:P41412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- res2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle-related protein res2/pct1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.09c","synonyms":[{"name":"Spom972h-res2","type":"exact"}],"termid":"PR:P41412"}


id: FYPO:0000735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short spindle","termid":"FYPO:0000130"},{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0002399","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"short meiotic spindle","synonyms":[{"name":"decreased meiotic spindle length","type":"exact"},{"name":"short meiotic spindles","type":"exact"},{"name":"short spindle during meiosis","type":"exact"}],"termid":"FYPO:0000735"}


id: GO:0050695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoylformate = benzaldehyde + CO2.","definition_xrefs":["EC:4.1.1.7","MetaCyc:BENZOYLFORMATE-DECARBOXYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzoylformate decarboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r1049","RHEA:23368"],"synonyms":[{"name":"benzoylformate carboxy-lyase (benzaldehyde-forming)","type":"related"},{"name":"benzoylformate carboxy-lyase activity","type":"related"},{"name":"phenylglyoxylate decarboxylase activity","type":"exact"}],"termid":"GO:0050695"}


id: PBO:0109628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1L (pseudogene)","termid":"PBO:0109628"}


id: GO:2001178
data:
  {"annotated_genes":["SJAG_00973","SJAG_03421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87976,105456],"is_not":false,"summary":null,"term":"GO:2001178"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mediator complex assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of mediator complex assembly","termid":"GO:2001176"},{"relation_name":"positively_regulates","term_name":"mediator complex assembly","termid":"GO:0036034"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00973":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of mediator complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2001178","terms_by_termid":{"GO:2001178":null}}


id: PBO:0088141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein with a possible role in sequestering heavy metals; involved in the oxidative stress response and modulation of replicative lifespan; undergoes autophosphorylation, which is abolished by mutation of Asp781 in the catalytic motif (D781N); P5 ATPase subfamily member with similarity to yeast Spf1p and homology of human ATP13A2 (PARK9), mutations in which are associated with Parkinson disease and Kufor-Rakeb syndrome","termid":"PBO:0088141"}


id: GO:0032617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The appearance of interleukin-14 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 production (obsolete GO:0032617)","synonyms":[{"name":"IL-14 production","type":"exact"},{"name":"interleukin-14 biosynthetic process","type":"narrow"},{"name":"interleukin-14 secretion","type":"narrow"}],"termid":"GO:0032617"}


id: PATO:0001993
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellularity quality inhering in a bearer by virtue of the bearer's consisting of more than one cell.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularity","termid":"PATO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multicellular","termid":"PATO:0001993"}


id: PBO:0085831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery","termid":"PBO:0085831"}


id: GO:0070571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron projection regeneration, the regrowth of neuronal processes such as axons or dendrites following their loss or damage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of neuron projection regeneration","termid":"GO:0070570"},{"relation_name":"negatively_regulates","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection regeneration","synonyms":[{"name":"growth cone collapse","type":"related"}],"termid":"GO:0070571"}


id: GO:0062107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to a non-growing cell tip.","definition_xrefs":["PMID:18328707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"regulates","term_name":"protein localization to non-growing cell tip","termid":"GO:1902487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to non-growing cell tip","termid":"GO:0062107"}


id: GO:0018163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-5'-DNA)-L-tyrosine.","definition_xrefs":["RESID:AA0254"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via the 5'-end to peptidyl-tyrosine (obsolete GO:0018163)","synonyms":[{"name":"DNA-protein covalent cross-linking via the 5' end to peptidyl-tyrosine","type":"exact"}],"termid":"GO:0018163"}


id: GO:0007424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an open tracheal system over time, from its formation to the mature structure. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:8625828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"open tracheal system development","termid":"GO:0007424"}


id: GO:0033793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 2',4,4',6'-tetrahydroxychalcone 4'-O-beta-D-glucoside + H+ + O2 = aureusidin 6-O-beta-glucoside + H2O, 2 2',3,4,4',6'-pentahydroxychalcone 4'-O-beta-D-glucoside + 2 H+ + O2 = 2 aureusidin 6-O-beta-glucoside + 2 H2O, and 2',3,4,4',6'-pentahydroxychalcone 4'-O-beta-D-glucoside + H+ + O2 = bracteatin 6-O-beta-glucoside + H2O. This activity consists of two separate chemical transformations: 3-hydroxylation and oxidative cyclization (2',-dehydrogenation).","definition_xrefs":["EC:1.21.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aureusidin synthase activity","synonyms":[{"name":"2',4,4',6'-tetrahydroxychalcone:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0033793"}


id: PBO:0058118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4421","termid":"PBO:0058118"}


id: MONDO:1010818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in Western roe deer.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, Western roe deer","secondary_identifiers":["OMIA:000810-9858"],"termid":"MONDO:1010818","xrefs":{"Monarch":{"xref_id":"1010818"}}}


id: MONDO:1012928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in Rhesus monkey due to a mutation in the APP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, APP-related, Rhesus monkey","secondary_identifiers":["OMIA:002538-9544"],"termid":"MONDO:1012928","xrefs":{"Monarch":{"xref_id":"1012928"}}}


id: PBO:0034551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_subtelomeric_chromatin_knob_formation","termid":"PBO:0034551"}


id: MONDO:1010698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease that occurs in dogs due to a mutation in the G6PC1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease, G6PC1-related, dog","secondary_identifiers":["OMIA:000418-9615"],"synonyms":[{"name":"glycogen storage disease Ia, dog","type":"related"}],"termid":"MONDO:1010698","xrefs":{"Monarch":{"xref_id":"1010698"}}}


id: PBO:0075667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 2","termid":"PBO:0075667"}


id: PBO:0063796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 24","termid":"PBO:0063796"}


id: PBO:0030182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_population","termid":"PBO:0030182"}


id: GO:0033078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a T cell via a differentiation pathway independent of the thymus.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extrathymic T cell differentiation","synonyms":[{"name":"extrathymic T cell development","type":"related"}],"termid":"GO:0033078"}


id: GO:1905871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell leading edge.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26324884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cell leading edge","termid":"GO:1902463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell leading edge","synonyms":[{"name":"regulation of protein localisation in cell leading edge","type":"exact"},{"name":"regulation of protein localisation to cell leading edge","type":"exact"},{"name":"regulation of protein localization in cell leading edge","type":"exact"}],"termid":"GO:1905871"}


id: PBO:0012269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 4 Pre6","termid":"PBO:0012269"}


id: PBO:0017788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy-related CDK inhibitor Srw1","termid":"PBO:0017788"}


id: FYPO:0003668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caffeine than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to caffeine","termid":"FYPO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to caffeine during cellular response to hydroxyurea","synonyms":[{"name":"resistance to caffeine during cellular response to HU","type":"exact"},{"name":"resistance to caffeine during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"resistant to caffeine during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0003668"}


id: FYECO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with phenylalanine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, phenylalanine nitrogen source","termid":"FYECO:0000296"}


id: GO:0000138
data:
  {"annotated_genes":["SJAG_03278","SJAG_03634","SJAG_03347","SJAG_01025","SJAG_00567"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71087,76249,78316,95808,99268],"is_not":false,"summary":null,"term":"GO:0000138"}]},"cv_name":"cellular_component","definition":"The Golgi cisterna farthest from the endoplasmic reticulum; the final processing compartment through which proteins pass before exiting the Golgi apparatus; the compartment in which N-linked protein glycosylation is completed.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna","termid":"GO:0031985"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_01025":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"Golgi trans cisterna","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"late Golgi","type":"related"}],"termid":"GO:0000138","terms_by_termid":{"GO:0000138":null}}


id: GO:0110032
data:
  {"annotated_genes":["SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73338],"is_not":false,"summary":null,"term":"GO:0110032"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to MI phase of the meiotic cell cycle.","definition_xrefs":["GOC:vw","PMID:25492408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G2/MI transition of meiotic cell cycle","termid":"GO:0110030"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle phase transition","termid":"GO:1901995"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle G2/M phase transition","termid":"GO:1902751"},{"relation_name":"positively_regulates","term_name":"G2/MI transition of meiotic cell cycle","termid":"GO:0008315"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of G2/MI transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0110032","terms_by_termid":{"GO:0110032":null}}


id: PBO:0043477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Pas1/PHO80 domain containing 1","termid":"PBO:0043477"}


id: GO:0050544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid binding","termid":"GO:0050542"},{"relation_name":"is_a","term_name":"icosatetraenoic acid binding","termid":"GO:0050543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"arachidonate binding","synonyms":[{"name":"arachidonic acid binding","type":"exact"}],"termid":"GO:0050544"}


id: MONDO:0003236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenomyoma characterized by the presence of marked glandular architectural complexity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenomyoma","termid":"MONDO:0005635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical polypoid adenomyoma","secondary_identifiers":["NCIT:C6895","DOID:4993","UMLS:C1300347","MEDGEN:266248"],"synonyms":[{"name":"atypical polypoid adenomyoma","type":"exact"},{"name":"atypical polypoid adenomyoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003236","xrefs":{"Monarch":{"xref_id":"0003236"}}}


id: MONDO:0009725
data:
  {"annotated_genes":["SJAG_03379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86494],"is_not":false,"summary":null,"term":"MONDO:0009725"}]},"cv_name":"mondo","definition":"An autosomal recessive inherited myopathy caused by mutations in the NEB gene. It is characterized by generalized hypotonia and skeletal muscle weakness.","definition_xrefs":["NCIT:C118784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"},{"relation_name":"is_a","term_name":"intermediate nemaline myopathy","termid":"MONDO:0015736"},{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"},{"relation_name":"is_a","term_name":"childhood-onset nemaline myopathy","termid":"MONDO:0015738"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"nemaline myopathy 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110928","MEDGEN:342534","MESH:C538349","GARD:15209","OMIM:256030","UMLS:C1850569"],"synonyms":[{"name":"NEB nemaline myopathy","type":"exact"},{"name":"NEM2","type":"exact"},{"name":"nemaline myopathy 2","type":"exact"},{"name":"nemaline myopathy 2, autosomal recessive","type":"exact"},{"name":"nemaline myopathy caused by mutation in NEB","type":"exact"},{"name":"nemaline myopathy type 2","type":"exact"}],"termid":"MONDO:0009725","terms_by_termid":{"MONDO:0009725":null},"xrefs":{"Monarch":{"xref_id":"0009725"}}}


id: GO:0102324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-6-oxo-nona-2,4-dienoate + H2O = butyrate + 2-oxopent-4-enoate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-6-oxo-nona-2,4-dienoate hydrolase activity (obsolete GO:0102324)","termid":"GO:0102324"}


id: MONDO:0012897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital factor XI deficiency is an inherited bleeding disorder characterized by reduced levels and activity of factor XI (FXI) resulting in moderate bleeding symptoms, usually occurring after trauma or surgery.","definition_xrefs":["Orphanet:329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal genetic disease","termid":"MONDO:0000429"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"factor XI deficiency","termid":"MONDO:0020587"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital factor XI deficiency","secondary_identifiers":["icd11.foundation:413739466","ICD9:286.2","NCIT:C84705","DOID:2229","MEDGEN:8770","OMIM:612416","SCTID:49762007","UMLS:C0015523","GARD:9670"],"synonyms":[{"name":"F11 deficiency","type":"related"},{"name":"PTA deficiency","type":"exact"},{"name":"Rosenthal factor deficiency","type":"exact"},{"name":"Rosenthal syndrome","type":"exact"},{"name":"Rosenthal's disease","type":"exact"},{"name":"congenital factor XI deficiency","type":"exact"},{"name":"factor 11 deficiency","type":"related"},{"name":"factor XI deficiency","type":"related"},{"name":"factor XI deficiency, autosomal dominant","type":"exact"},{"name":"factor XI deficiency, autosomal recessive","type":"exact"},{"name":"haemophilia C","type":"exact"},{"name":"hemophilia C","type":"exact"},{"name":"hereditary Factor XI deficiency","type":"exact"},{"name":"hereditary factor XI deficiency","type":"exact"},{"name":"hereditary factor XI deficiency disease","type":"exact"},{"name":"plasma thromboplastin antecedent deficiency","type":"exact"}],"termid":"MONDO:0012897","xrefs":{"Monarch":{"xref_id":"0012897"}}}


id: MONDO:0100519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 17","secondary_identifiers":["UMLS:C5561931","MEDGEN:1794141","OMIM:602477"],"synonyms":[{"name":"EIG17","type":"exact"}],"termid":"MONDO:0100519","xrefs":{"Monarch":{"xref_id":"0100519"}}}


id: SO:0001986
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature variant, where the alteration occurs upstream of the transcript TSS.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream_transcript_variant","synonyms":[{"name":"upstream transcript variant","type":"exact"}],"termid":"SO:0001986"}


id: PBO:0082184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alanine transaminase (glutamic pyruvic transaminase); involved in alanine biosynthesis and catabolism; TOR1-independent role in determining chronological lifespan; expression is induced in the presence of alanine; repression is mediated by Nrg1p; ALT1 has a paralog, ALT2, that arose from the whole genome duplication; Alt2p is catalytically inactive","termid":"PBO:0082184"}


id: GO:0004649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(ADP-ribose) at glycosidic (1''-2') linkage of ribose-ribose bond to produce free ADP-ribose.","definition_xrefs":["EC:3.2.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"poly(ADP-ribose) glycohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.143-RXN","Reactome:R-HSA-8952903","Reactome:R-HSA-5651828","RHEA:52216"],"termid":"GO:0004649"}


id: MONDO:1011542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in greater kudu.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ichthyosis, non-human animal","termid":"MONDO:1011427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, greater kudu","secondary_identifiers":["OMIA:001993-9946"],"termid":"MONDO:1011542","xrefs":{"Monarch":{"xref_id":"1011542"}}}


id: PBO:0031738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mating_type_switching","termid":"PBO:0031738"}


id: MONDO:0016678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete maternal disease-related embryofetopathy (obsolete MONDO:0016678)","secondary_identifiers":["Orphanet:251535"],"termid":"MONDO:0016678","xrefs":{"Monarch":{"xref_id":"0016678"}}}


id: GO:1905176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell dedifferentiation.","definition_xrefs":["GOC:TermGenie","PMID:19088079","GO_REF:0000058","GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell dedifferentiation","termid":"GO:1905174"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell dedifferentiation","termid":"GO:1990936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell dedifferentiation","synonyms":[{"name":"activation of vascular smooth muscle cell dedifferentiation","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"up regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"upregulation of vascular smooth muscle cell dedifferentiation","type":"exact"}],"termid":"GO:1905176"}


id: PBO:0090983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylglycerol lipase","termid":"PBO:0090983"}


id: PBO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain","termid":"PBO:0001327"}


id: PBO:0044908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dexi homolog","termid":"PBO:0044908"}


id: FYPO:0007655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at one or more specific sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:33511417","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"increased nucleosome occupancy","synonyms":[{"name":"increased nucleosome occupancy during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy during vegetative growth","type":"exact"}],"termid":"FYPO:0007655"}


id: GO:0052814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain fatty aldehyde + H2O + NAD+ = a medium chain fatty acid + 2 H+ + NADH.","definition_xrefs":["RHEA:69763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty aldehyde dehydrogenase (NAD+) activity","termid":"GO:0102673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"medium-chain fatty aldehyde dehydrogenase (NAD+) activity","synonyms":[{"name":"medium-chain aliphatic aldehyde dehydrogenase activity","type":"related"},{"name":"medium-chain fatty aldehyde dehydrogenase activity","type":"related"},{"name":"medium-chain-aldehyde dehydrogenase activity","type":"exact"},{"name":"medium-chain-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0052814"}


id: MONDO:0004358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma of the larynx that arises from the subglottic area.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subglottis cancer","termid":"MONDO:0001293"},{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"subglottis carcinoma","secondary_identifiers":["SCTID:372104008","DOID:7764","MEDGEN:226968","UMLS:C1299239","NCIT:C5972"],"synonyms":[{"name":"cancer of subglottis","type":"broad"},{"name":"cancer of the subglottis","type":"broad"},{"name":"carcinoma of subglottis","type":"exact"},{"name":"carcinoma of the subglottis","type":"exact"},{"name":"subglottic cancer","type":"broad"},{"name":"subglottic carcinoma","type":"exact"},{"name":"subglottic throat cancer","type":"broad"},{"name":"subglottis carcinoma","type":"exact"}],"termid":"MONDO:0004358","xrefs":{"Monarch":{"xref_id":"0004358"}}}


id: GO:0018301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into an iron-sulfur cluster by tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon.","definition_xrefs":["RESID:AA0268"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon (obsolete GO:0018301)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-cysteine persulphido-bis-L-glutamato-L-histidino tetrairon","type":"exact"}],"termid":"GO:0018301"}


id: PBO:0004660
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIRA Interacting Protein","termid":"PBO:0004660"}


id: PBO:0044844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 130C (pseudogene)","termid":"PBO:0044844"}


id: PBO:0046449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPPIN-WFDC6 readthrough","termid":"PBO:0046449"}


id: PBO:0051311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-3 (pseudogene)","termid":"PBO:0051311"}


id: GO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyterpenoid compounds, terpenoids with more than eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"polyterpenoid metabolic process","synonyms":[{"name":"polyterpene metabolic process","type":"narrow"},{"name":"polyterpene metabolism","type":"narrow"},{"name":"polyterpenoid metabolism","type":"exact"}],"termid":"GO:0016111"}


id: PBO:0053804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1061","termid":"PBO:0053804"}


id: GO:0001558
data:
  {"annotated_genes":["SJAG_03581","SJAG_03486","SJAG_04322","SJAG_00514","SJAG_02392","SJAG_02723","SJAG_00244","SJAG_03705","SJAG_00216","SJAG_03602","SJAG_04724","SJAG_01456","SJAG_02838","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94337,89624,95604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[99500,106611,116222,110510,117646,87816,103242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[90489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[106411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030307"},{"annotations":[114791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[98189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or direction of cell growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_01456":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03602":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001558","terms_by_termid":{"GO:0030307":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061387":null}}


id: FYPO:0007685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is increased relative to normal under conditions of starvation for one or more nutrients.","definition_xrefs":["PomBase:mah","PMID:33574613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"increased vegetative cell population growth during nutrient starvation","synonyms":[{"name":"fast vegetative cell population growth during nutrient starvation","type":"narrow"},{"name":"increased vegetative cell population growth during nutrient depletion","type":"exact"},{"name":"increased vegetative cell population growth during nutrient deprivation","type":"exact"},{"name":"increased vegetative cell population growth during nutrient limitation","type":"exact"},{"name":"increased vegetative cell population growth in response to nutrient starvation","type":"exact"},{"name":"resistant to nutrient starvation","type":"related"}],"termid":"FYPO:0007685"}


id: PBO:0051664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INAVA pseudogene 1","termid":"PBO:0051664"}


id: PBO:0059122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 2","termid":"PBO:0059122"}


id: GO:0045193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of acetylated low-density lipoproteins.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylated low-density lipoprotein catabolic process (obsolete GO:0045193)","synonyms":[{"name":"Ac-LDL catabolic process","type":"exact"},{"name":"Ac-LDL catabolism","type":"exact"},{"name":"acetylated low-density lipoprotein breakdown","type":"exact"},{"name":"acetylated low-density lipoprotein catabolic process","type":"exact"},{"name":"acetylated low-density lipoprotein catabolism","type":"exact"},{"name":"acetylated low-density lipoprotein degradation","type":"exact"}],"termid":"GO:0045193"}


id: GO:0019848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts to inhibit neural function in another organism by inhibiting voltage-gated calcium ion channels and neurotransmitter release. This function is thought to be specific to the venom of two marine snail species.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete conotoxin activity (obsolete GO:0019848)","synonyms":[{"name":"conotoxin activity","type":"exact"}],"termid":"GO:0019848"}


id: PBO:0088526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific disordered protein","termid":"PBO:0088526"}


id: GO:1901314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2A K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2A K63-linked ubiquitination (obsolete GO:1901314)","termid":"GO:1901314"}


id: MONDO:0020816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria papulosa","secondary_identifiers":["MEDGEN:590456","SCTID:201192006","UMLS:C0406494"],"termid":"MONDO:0020816","xrefs":{"Monarch":{"xref_id":"0020816"}}}


id: MONDO:0044683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete limbic encephalitis with neurexin-3 antibodies (obsolete MONDO:0044683)","secondary_identifiers":["Orphanet:498700"],"termid":"MONDO:0044683","xrefs":{"Monarch":{"xref_id":"0044683"}}}


id: PBO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Dlc2 (predicted)","termid":"PBO:0002273"}


id: PBO:0004271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps33","termid":"PBO:0004271"}


id: PBO:0075809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 2","termid":"PBO:0075809"}


id: MONDO:0700018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 11 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 disorder","termid":"MONDO:0700018","xrefs":{"Monarch":{"xref_id":"0700018"}}}


id: GO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deletion of B cells by apoptotic process occurring as part of central tolerance induction and B cell selection.","definition_xrefs":["GOC:add","GOC:jal","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deletion","termid":"GO:0002516"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"part_of","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell deletion","synonyms":[{"name":"central B lymphocyte deletion","type":"exact"},{"name":"central B-cell deletion","type":"exact"},{"name":"central B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002342"}


id: PBO:0042971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 10","termid":"PBO:0042971"}


id: PBO:0041953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil and C2 domain containing 1A","termid":"PBO:0041953"}


id: GO:0042590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.","definition_xrefs":["PMID:15771591","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"},{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class I","secondary_identifiers":["Reactome:R-HSA-1236975"],"synonyms":[{"name":"antigen presentation, exogenous antigen via MHC class I","type":"exact"},{"name":"antigen presentation, exogenous antigen via major histocompatibility complex class I","type":"exact"},{"name":"cross presentation","type":"broad"},{"name":"cross priming","type":"broad"},{"name":"cross-presentation","type":"broad"},{"name":"cross-priming","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0042590"}


id: PBO:0085194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ornithine decarboxylase; catalyzes the first step in polyamine biosynthesis; degraded in a proteasome-dependent manner in the presence of excess polyamines; deletion decreases lifespan, and increases necrotic cell death and ROS generation","termid":"PBO:0085194"}


id: PBO:0049164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 6","termid":"PBO:0049164"}


id: PBO:0038701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 14","termid":"PBO:0038701"}


id: MONDO:0011258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any branchiootic syndrome in which the cause of the disease is a mutation in the EYA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiootic syndrome","termid":"MONDO:0018878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchiootic syndrome 1","secondary_identifiers":["OMIM:602588","UMLS:C1865143","MEDGEN:351307"],"synonyms":[{"name":"BOS1","type":"related"},{"name":"EYA1 branchiootic syndrome","type":"exact"},{"name":"anterior segment anomalies with or without cataract","type":"related"},{"name":"bo syndrome 1","type":"related"},{"name":"branchiootic dysplasia","type":"related"},{"name":"branchiootic syndrome 1","type":"exact"},{"name":"branchiootic syndrome caused by mutation in EYA1","type":"exact"},{"name":"branchiootic syndrome type 1","type":"exact"}],"termid":"MONDO:0011258","xrefs":{"Monarch":{"xref_id":"0011258"}}}


id: GO:0002892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type II hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"regulates","term_name":"type II hypersensitivity","termid":"GO:0002445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type II hypersensitivity","termid":"GO:0002892"}


id: PBO:0004731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiazole biosynthetic enzyme","termid":"PBO:0004731"}


id: GO:0001049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to RNA polymerase V core enzyme, a multisubunit eukaryotic nuclear RNA polymerase found in plants and involved in production of noncoding transcripts at target loci for silencing.","definition_xrefs":["GOC:txnOH","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"RNA polymerase V core binding","termid":"GO:0001049"}


id: PBO:0075183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPF divergent transcript","termid":"PBO:0075183"}


id: PBO:0063498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 7","termid":"PBO:0063498"}


id: GO:0071708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin light chain V and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin V(D)J recombination","termid":"GO:0033152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0010467","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"immunoglobulin light chain V-J recombination","synonyms":[{"name":"immunoglobulin V(D)J joining","type":"broad"},{"name":"immunoglobulin V(D)J recombination","type":"broad"},{"name":"immunoglobulin V-J joining","type":"exact"}],"termid":"GO:0071708"}


id: PBO:0036152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_iMTOC","termid":"PBO:0036152"}


id: GO:0048624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a new plantlet develops from a meristem on the plant body. As part of this process, when the plantlet is large enough to live independently, the physical connection between the new plantlet and the main plant is severed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"asexual reproduction","termid":"GO:0019954"},{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"meristem development","termid":"GO:0048507"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plantlet formation on parent plant","synonyms":[{"name":"vegetative vivipary","type":"broad"},{"name":"vivipary","type":"broad"}],"termid":"GO:0048624"}


id: PR:O74455
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 6-phosphogluconolactonase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11054:SF0","OMA:SCHPO04412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.10","secondary_identifiers":["UniProtKB:O74455"],"synonyms":[{"name":"6PGL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGLS","type":"exact"}],"termid":"PR:O74455"}


id: PATO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's exhibiting movement in a circular course.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement behavioral quality","termid":"PATO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circling","termid":"PATO:0001911"}


id: FYPO:0005993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["PomBase:mah","GO:0002181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cytoplasmic translation","synonyms":[{"name":"normal cytoplasmic protein biosynthesis","type":"exact"},{"name":"normal cytoplasmic protein synthesis","type":"exact"},{"name":"normal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0005993"}


id: PBO:0082307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic protease; hyperglycosylated member of the yapsin family of proteases, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor; involved in nutrient limitation-induced cleavage of the extracellular inhibitory domain of signaling mucin Msb2p, resulting in activation of the filamentous growth MAPK pathway; involved with other yapsins in the cell wall integrity response; role in KEX2-independent processing of the alpha factor precursor","termid":"PBO:0082307"}


id: PBO:0066993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 296","termid":"PBO:0066993"}


id: MONDO:0011641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculum, congenital absence of","secondary_identifiers":["MEDGEN:344078","UMLS:C1853565","OMIM:606174"],"synonyms":[{"name":"Os penis, congenital absence of","type":"related"},{"name":"baculum, congenital absence of","type":"exact"}],"termid":"MONDO:0011641","xrefs":{"Monarch":{"xref_id":"0011641"}}}


id: GO:0005607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta1 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-2 complex","synonyms":[{"name":"laminin-211 complex","type":"exact"}],"termid":"GO:0005607"}


id: MONDO:0014004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 4","secondary_identifiers":["UMLS:C3554321","GARD:15893","MEDGEN:767235","OMIM:615007"],"synonyms":[{"name":"IBGC4","type":"related"},{"name":"basal ganglia calcification, idiopathic, 4","type":"exact"},{"name":"basal ganglia calcification, idiopathic, type 4","type":"exact"}],"termid":"MONDO:0014004","xrefs":{"Monarch":{"xref_id":"0014004"}}}


id: PBO:0051366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-34 (pseudogene)","termid":"PBO:0051366"}


id: GO:0071693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins in the extracellular region, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to extracellular region","termid":"GO:0035592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein transport within extracellular region","termid":"GO:0071693"}


id: GO:0046826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of proteins from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleocytoplasmic transport","termid":"GO:0046823"},{"relation_name":"is_a","term_name":"regulation of protein export from nucleus","termid":"GO:0046825"},{"relation_name":"is_a","term_name":"maintenance of protein location in nucleus","termid":"GO:0051457"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"negatively_regulates","term_name":"protein export from nucleus","termid":"GO:0006611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"negatively_regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"negative regulation of protein export from nucleus","synonyms":[{"name":"down regulation of protein export from nucleus","type":"exact"},{"name":"down-regulation of protein export from nucleus","type":"exact"},{"name":"downregulation of protein export from nucleus","type":"exact"},{"name":"inhibition of protein export from nucleus","type":"narrow"},{"name":"negative regulation of protein export from cell nucleus","type":"exact"},{"name":"negative regulation of protein export out of nucleus","type":"exact"},{"name":"negative regulation of protein transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of protein-nucleus export","type":"exact"}],"termid":"GO:0046826"}


id: PBO:0003840
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.85","termid":"PBO:0003840"}


id: SO:0002161
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where the copies of a short tandem repeat (STR) feature are either contracted or expanded.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_variant","termid":"SO:0002160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short_tandem_repeat_change","synonyms":[{"name":"short tandem repeat change","type":"exact"},{"name":"str change","type":"exact"}],"termid":"SO:0002161"}


id: GO:0051974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of the enzyme telomerase, which catalyzes of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of telomerase activity (obsolete GO:0051974)","synonyms":[{"name":"down regulation of telomerase activity","type":"exact"},{"name":"down-regulation of telomerase activity","type":"exact"},{"name":"downregulation of telomerase activity","type":"exact"},{"name":"inhibition of telomerase activity","type":"narrow"},{"name":"telomerase inhibitor","type":"related"}],"termid":"GO:0051974"}


id: PBO:0029349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_level","termid":"PBO:0029349"}


id: MONDO:0015770
data:
  {"annotated_genes":["SJAG_04110","SJAG_04398","SJAG_02829","SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[86636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[85269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[84979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[86469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"}]},"cv_name":"mondo","definition":"Congenital hypogonadotropic hypogonadism (CHH) is a rare disorder of sexual maturation characterized by gonadotropin (Gn) deficiency with low sex steroid levels associated with low levels of follicle stimulating hormone (FSH) and luteinizing hormone (LH).","definition_xrefs":["Orphanet:174590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"},{"relation_name":"is_a","term_name":"non-acquired pituitary hormone deficiency","termid":"MONDO:0019824"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_02829":null,"SJAG_04110":null,"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"congenital hypogonadotropic hypogonadism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C120162","SCTID:722944006","UMLS:C3899503","icd11.foundation:1752075408","NANDO:1200383","MEDGEN:859097","ICD10CM:E23.0","GARD:20135"],"termid":"MONDO:0015770","terms_by_termid":{"MONDO:0008980":null,"MONDO:0009514":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0014497":null},"xrefs":{"Monarch":{"xref_id":"0015770"}}}


id: PBO:0057022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR122 host gene","termid":"PBO:0057022"}


id: PBO:0053928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1227","termid":"PBO:0053928"}


id: MONDO:0014778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lamb-Shaffer syndrome","secondary_identifiers":["OMIM:616803","UMLS:C4225202","MEDGEN:903542","Orphanet:530983","GARD:22211"],"synonyms":[{"name":"LAMSHF","type":"exact"},{"name":"Lamb-Shaffer syndrome","type":"exact"},{"name":"Lamb-Shaffer syndrome; LAMSHF","type":"exact"}],"termid":"MONDO:0014778","xrefs":{"Monarch":{"xref_id":"0014778"}}}


id: MONDO:0006088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A circumscribed neoplasm arising from the glandular epithelium of the appendix. Morphologically, it is characterized by a proliferation of neoplastic glandular cells and it is associated with dysplasia. According to the growth pattern, it may be classified as tubular, villous, or tubulovillous. The dysplasia is classified as mild, moderate, or severe.","definition_xrefs":["NCIT:C43550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenoma","termid":"MONDO:0000527"},{"relation_name":"is_a","term_name":"epithelial tumor of the appendix","termid":"MONDO:0018511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"appendix adenoma","secondary_identifiers":["UMLS:C1706829","EFO:1000089","MEDGEN:312900"],"synonyms":[{"name":"appendix adenoma","type":"exact"},{"name":"vermiform appendix adenoma","type":"exact"}],"termid":"MONDO:0006088","xrefs":{"Monarch":{"xref_id":"0006088"}}}


id: GO:0071476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonic response","termid":"GO:0006971"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hypotonic response","synonyms":[{"name":"cellular hypo-osmotic response","type":"exact"}],"termid":"GO:0071476"}


id: PBO:0111070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase/ubiquitin protein ligase E3 Rhp16/Rad16","termid":"PBO:0111070"}


id: GO:0042732
data:
  {"annotated_genes":["SJAG_03958","SJAG_04660","SJAG_04276","SJAG_02010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65534],"is_not":false,"summary":null,"term":"GO:0042732"},{"annotations":[95509,100939,94779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-xylose, a naturally occurring plant polysaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03958":null,"SJAG_04276":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-xylose metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"D-xylose metabolism","type":"exact"}],"termid":"GO:0042732","terms_by_termid":{"GO:0042732":null,"GO:0042843":null}}


id: GO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which B cells acquire the specialized features of B-1a B cells. B-1a B cells are B-1 cells that express CD5 and arise from fetal liver precursors.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1a B cell differentiation","synonyms":[{"name":"B-1a B cell development","type":"related"},{"name":"B-1a B lymphocyte differentiation","type":"exact"},{"name":"B-1a B-cell differentiation","type":"exact"},{"name":"B-1a B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002337"}


id: GO:0098878
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any protein complex that is capable of functioning as a neurotransmitter receptor.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"neurotransmitter receptor complex","termid":"GO:0098878"}


id: MONDO:0012781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 12","secondary_identifiers":["OMIM:612010","UMLS:C2677602","MEDGEN:436989"],"synonyms":[{"name":"CELIAC12","type":"exact"},{"name":"celiac disease, susceptibility to, 12","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 12","type":"related"}],"termid":"MONDO:0012781","xrefs":{"Monarch":{"xref_id":"0012781"}}}


id: PATO:0002427
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape having numerous very small circular rounded projections or protuberances.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"knobbled","termid":"PATO:0002427"}


id: GO:0003396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite in a neuron of the amphid sensory organ.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in dendrite retrograde extension","termid":"GO:0003394"},{"relation_name":"part_of","term_name":"amphid sensory organ dendrite retrograde extension","termid":"GO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in amphid sensory organ dendrite retrograde extension","termid":"GO:0003396"}


id: PBO:0039757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atherosclerotic plaque pathogenesis associated transcript","termid":"PBO:0039757"}


id: PBO:0054858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2272","termid":"PBO:0054858"}


id: PBO:0045592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 3 (pseudogene)","termid":"PBO:0045592"}


id: PBO:0038844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 13","termid":"PBO:0038844"}


id: PBO:0084584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR055C was originally annotated as an independent ORF, but as a result of sequence changes, it was merged with two other ORFs into a single reading frame, designated YCR057C","termid":"PBO:0084584"}


id: GO:0072505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent inorganic anions within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete divalent inorganic anion homeostasis (obsolete GO:0072505)","termid":"GO:0072505"}


id: GO:1903439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of calcitonin family receptor activity. Calcitonin family receptors may form dimers, trimers or tetramers; adrenomedullin and amylin receptors have only been observed as dimers so far.","definition_xrefs":["PMID:12037140","GOC:bhm","PMID:18687416","GOC:TermGenie","GO_REF:0000088","PMID:10871296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor complex","termid":"GO:0097648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"calcitonin family receptor complex","termid":"GO:1903439"}


id: PBO:0051673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 3","termid":"PBO:0051673"}


id: PBO:0033769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cytoplasm_with_protein_mislocalized_to_nucleus_during_mitotic_interphase","termid":"PBO:0033769"}


id: MONDO:0020147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anophthalmia-microphthalmia syndrome (obsolete MONDO:0020147)","secondary_identifiers":["Orphanet:98555"],"termid":"MONDO:0020147","xrefs":{"Monarch":{"xref_id":"0020147"}}}


id: GO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a pro-T cell becomes committed to becoming an NK T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"part_of","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell lineage commitment","synonyms":[{"name":"NK T lymphocyte lineage commitment","type":"exact"},{"name":"NK T-cell lineage commitment","type":"exact"},{"name":"NK T-lymphocyte lineage commitment","type":"exact"},{"name":"natural killer T lymphocyte lineage commitment","type":"exact"},{"name":"natural killer T-cell lineage commitment","type":"exact"},{"name":"natural killer T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002364"}


id: GO:0044518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that activates or increases the frequency, rate or extent of the activity of a vasoactive intestinal polypeptide receptor in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of vasoactive intestinal polypeptide receptor activity in another organism (obsolete GO:0044518)","synonyms":[{"name":"positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044518"}


id: PBO:0050024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP beta 2 (pseudogene)","termid":"PBO:0050024"}


id: PBO:0042880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 210","termid":"PBO:0042880"}


id: PBO:0078233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 15","termid":"PBO:0078233"}


id: PBO:0073165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC63 homolog, protein translocation regulator pseudogene 2","termid":"PBO:0073165"}


id: PBO:0058758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6882","termid":"PBO:0058758"}


id: PBO:0075682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequestosome 1 pseudogene 1","termid":"PBO:0075682"}


id: GO:0061891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of calcium ions (Ca2+).","definition_xrefs":["PMID:16005298","PMID:28151650","PMID:17020874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140299"],"is_obsolete":false,"name":"calcium ion sensor activity","termid":"GO:0061891"}


id: PBO:0085473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology and sporulation; homolog of the human protein Dullard","termid":"PBO:0085473"}


id: PBO:0073172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L family member 3","termid":"PBO:0073172"}


id: PBO:0048071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 22","termid":"PBO:0048071"}


id: PBO:0045723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6","termid":"PBO:0045723"}


id: PBO:0044207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 6","termid":"PBO:0044207"}


id: MOD:01628
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms (2-aminosuccinimidyl)acetic acid by crosslinking either an aspartic acid residue or an asparagine residue with the following glycine residue.","definition_xrefs":["PubMed:10801322","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-aminosuccinimide ring crosslinked residues","termid":"MOD:01944"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"}


id: MONDO:0015456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete whooping cough (obsolete MONDO:0015456)","termid":"MONDO:0015456","xrefs":{"Monarch":{"xref_id":"0015456"}}}


id: SO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant of a codon resulting in the substitution of one amino acid for another in the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_substitution","synonyms":[{"name":"VAAST:amino_acid_substitution","type":"exact"},{"name":"amino acid substitution","type":"exact"}],"termid":"SO:0001606"}


id: PR:Q9Y7L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC685.03 gene.","definition_xrefs":["UniProtKB:Q9Y7L5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C685.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.03","synonyms":[{"name":"Spom972h-SPBC685.03","type":"exact"}],"termid":"PR:Q9Y7L5"}


id: GO:0051961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of nervous system development","termid":"GO:0051960"},{"relation_name":"negatively_regulates","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nervous system development","synonyms":[{"name":"down regulation of nervous system development","type":"exact"},{"name":"down-regulation of nervous system development","type":"exact"},{"name":"downregulation of nervous system development","type":"exact"},{"name":"inhibition of nervous system development","type":"narrow"}],"termid":"GO:0051961"}


id: GO:0045947
data:
  {"annotated_genes":["SJAG_02026","SJAG_01942","SJAG_02592","SJAG_03869","SJAG_02638","SJAG_00786","SJAG_00169","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111901,91072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[109422,69717,115358,74995,94127,99096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translational initiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"negatively_regulates","term_name":"translational initiation","termid":"GO:0006413"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translational initiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of translational initiation","type":"exact"},{"name":"down-regulation of translational initiation","type":"exact"},{"name":"downregulation of translational initiation","type":"exact"},{"name":"inhibition of translational initiation","type":"narrow"}],"termid":"GO:0045947","terms_by_termid":{"GO:1904689":null,"GO:1990625":null}}


id: PBO:0003973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex subunit Taf10","termid":"PBO:0003973"}


id: MONDO:0017833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"primary hypereosinophilic syndrome","secondary_identifiers":["MEDGEN:1830089","GARD:21395","Orphanet:314950","UMLS:C5679898"],"synonyms":[{"name":"HES-M","type":"exact"},{"name":"HES-N","type":"exact"},{"name":"clonal hypereosinophilic syndrome","type":"exact"},{"name":"neoplastic hypereosinophilic syndrome","type":"exact"},{"name":"primary HES","type":"exact"}],"termid":"MONDO:0017833","xrefs":{"Monarch":{"xref_id":"0017833"}}}


id: GO:1900996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of benzene.","definition_xrefs":["GOC:yaf","UniPathway:UPA00272","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene metabolic process","termid":"GO:0018910"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene catabolic process","synonyms":[{"name":"benzene breakdown","type":"exact"},{"name":"benzene catabolism","type":"exact"},{"name":"benzene degradation","type":"exact"}],"termid":"GO:1900996"}


id: PBO:0067396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 502, pseudogene","termid":"PBO:0067396"}


id: PBO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cip2","termid":"PBO:0000301"}


id: PBO:0073082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly factor 2","termid":"PBO:0073082"}


id: MONDO:0600029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decreased lung volume and inadequate ventilation due to parenchymal lung disorders (e.g., interstitial pulmonary fibrosis) or extrapulmonary disorders (e.g., scoliosis). Patients present with shortness of breath and cough.","definition_xrefs":["NCIT:C91762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restrictive pulmonary disease","secondary_identifiers":["MEDGEN:43209","SCTID:36485005","UMLS:C0085581"],"synonyms":[{"name":"Restrictive lung disease (disorder)","type":"exact"},{"name":"restrictive lung disease","type":"exact"}],"termid":"MONDO:0600029","xrefs":{"Monarch":{"xref_id":"0600029"}}}


id: PBO:0067623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 795, pseudogene","termid":"PBO:0067623"}


id: PBO:0073381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET nuclear proto-oncogene","termid":"PBO:0073381"}


id: GO:1904138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in notochord morphogenesis.","definition_xrefs":["PMID:24892953","GOC:dph","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in notochord morphogenesis","termid":"GO:1904136"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in notochord morphogenesis","synonyms":[{"name":"activation of convergent extension involved in notochord morphogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in notochord morphogenesis","type":"exact"}],"termid":"GO:1904138"}


id: PBO:0069703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 983, pseudogene","termid":"PBO:0069703"}


id: GO:2000535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of entry of bacterium into host cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"regulates","term_name":"entry of bacterium into host cell","termid":"GO:0035635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of entry of bacterium into host cell","synonyms":[{"name":"regulation of bacterial entry into host cell","type":"exact"},{"name":"regulation of invasion of bacteria into host cell","type":"exact"}],"termid":"GO:2000535"}


id: PBO:0066281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member E, pseudogene","termid":"PBO:0066281"}


id: PBO:0080856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YES proto-oncogene 1, Src family tyrosine kinase","termid":"PBO:0080856"}


id: PBO:0042103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 175","termid":"PBO:0042103"}


id: MONDO:0004687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"background diabetic retinopathy","termid":"MONDO:0001661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"severe nonproliferative diabetic retinopathy","secondary_identifiers":["DOID:8946","ICD9:362.06","SCTID:312905005","UMLS:C0730278","icd11.foundation:561966379","MEDGEN:676487"],"synonyms":[{"name":"high risk non proliferative diabetic retinopathy","type":"exact"},{"name":"severe NPDR","type":"exact"},{"name":"severe nonproliferative diabetic retinopathy","type":"exact"},{"name":"severe nonproliferative retinopathy","type":"related"},{"name":"severe npdr","type":"related"}],"termid":"MONDO:0004687","xrefs":{"Monarch":{"xref_id":"0004687"}}}


id: PBO:0075853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX2IP pseudogene 1","termid":"PBO:0075853"}


id: MONDO:0014929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the POMGNT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 76","secondary_identifiers":["UMLS:C4310704","GARD:16196","MEDGEN:934671","OMIM:617123"],"synonyms":[{"name":"POMGNT1 retinitis pigmentosa","type":"exact"},{"name":"RP76","type":"exact"},{"name":"retinitis pigmentosa 76","type":"exact"},{"name":"retinitis pigmentosa 76; RP76","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in POMGNT1","type":"exact"},{"name":"retinitis pigmentosa type 76","type":"exact"}],"termid":"MONDO:0014929","xrefs":{"Monarch":{"xref_id":"0014929"}}}


id: GO:0004757
data:
  {"annotated_genes":["SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108281],"is_not":false,"summary":null,"term":"GO:0004757"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: 7,8-dihydrobiopterin + NADP+ = sepiapterin + NADPH + H+ and (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin + 2 NADP+ = 6-pyruvoyl-5,6,7,8-tetrahydropterin + 2 H+ + 2 NADPH.","definition_xrefs":["EC:1.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sepiapterin reductase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SEPIAPTERIN-REDUCTASE-RXN","Reactome:R-HSA-1475414","Reactome:R-HSA-1497869"],"synonyms":[{"name":"7,8-dihydrobiopterin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0004757","terms_by_termid":{"GO:0004757":null}}


id: CHEBI:28300
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An alpha-amino acid that consists of butyric acid bearing an amino substituent at position 2 and a carbamoyl substituent at position 4.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine","termid":"CHEBI:28300"}


id: MONDO:0014123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DRC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 21","secondary_identifiers":["DOID:0110596","UMLS:C3809087","OMIM:615294","GARD:15940","MEDGEN:815417"],"synonyms":[{"name":"CILD21","type":"exact"},{"name":"DRC1 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 21","type":"related"},{"name":"ciliary dyskinesia, primary, 21, without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 21","type":"exact"},{"name":"primary ciliary dyskinesia 21 without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DRC1","type":"exact"},{"name":"primary ciliary dyskinesia type 21","type":"exact"}],"termid":"MONDO:0014123","xrefs":{"Monarch":{"xref_id":"0014123"}}}


id: PBO:0031901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein Grp2 (predicted)","termid":"PBO:0031901"}


id: PBO:0090668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR domain protein, DNAJC7 family","termid":"PBO:0090668"}


id: MONDO:0015142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ataxia syndrome (obsolete MONDO:0015142)","termid":"MONDO:0015142","xrefs":{"Monarch":{"xref_id":"0015142"}}}


id: PATO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's receiving or being subjected to an action without responding or initiating an action in return.","definition_xrefs":["www.answers.com:www.answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"passive","termid":"PATO:0000764"}


id: MONDO:0006012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lung parenchyma that is caused by a viral infection.","definition_xrefs":["MESH:D011024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"viral respiratory tract infection","termid":"MONDO:0024352"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral pneumonia","secondary_identifiers":["icd11.foundation:1024154490","SCTID:75570004","MEDGEN:45974","DOID:10533","ICD9:480.8","UMLS:C0032310","ICD9:480.9","ICD9:480","EFO:0007541"],"synonyms":[{"name":"Viruses caused pneumonia","type":"exact"},{"name":"Viruses pneumonia","type":"exact"}],"termid":"MONDO:0006012","xrefs":{"Monarch":{"xref_id":"0006012"}}}


id: PBO:0002773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c (proteolipid subunit)","termid":"PBO:0002773"}


id: PBO:0056753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 4","termid":"PBO:0056753"}


id: PBO:0042901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 5","termid":"PBO:0042901"}


id: MONDO:1010100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare complication of hypothyroidism characterized by altered mental status, hypothermia, and symptoms related to the slowing of other organ systems.","definition_xrefs":["PMID:38279788","PMID:33083180","PMID:34194879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism","termid":"MONDO:0005420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myxedema coma","termid":"MONDO:1010100","xrefs":{"Monarch":{"xref_id":"1010100"}}}


id: PBO:0071332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 9","termid":"PBO:0071332"}


id: PBO:0089389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c''","termid":"PBO:0089389"}


id: GO:1904041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cystathionine beta-synthase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:hal","PMID:24416422","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cystathionine beta-synthase activity (obsolete GO:1904041)","synonyms":[{"name":"regulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"regulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"regulation of beta-thionase activity","type":"exact"},{"name":"regulation of methylcysteine synthase activity","type":"exact"},{"name":"regulation of serine sulfhydrase activity","type":"exact"},{"name":"regulation of serine sulfhydrylase activity","type":"exact"}],"termid":"GO:1904041"}


id: PBO:0073475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGCE pseudogene 1","termid":"PBO:0073475"}


id: GO:0006849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pyruvate, 2-oxopropanoate, across a plasma membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate transmembrane transport","termid":"GO:1901475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"plasma membrane pyruvate transport","termid":"GO:0006849"}


id: GO:1903974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to macrophage colony-stimulating factor stimulus.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:nc","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to macrophage colony-stimulating factor","termid":"GO:1903971"},{"relation_name":"is_a","term_name":"regulation of cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:1903972"},{"relation_name":"positively_regulates","term_name":"cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:0036006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to macrophage colony-stimulating factor stimulus","synonyms":[{"name":"activation of cellular response to M-CSF stimulus","type":"narrow"},{"name":"activation of cellular response to macrophage colony-stimulating factor","type":"narrow"},{"name":"activation of cellular response to macrophage colony-stimulating factor stimulus","type":"narrow"},{"name":"positive regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"positive regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"up regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"up regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"up regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"up-regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"up-regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"up-regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"upregulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"upregulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"upregulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903974"}


id: PBO:0030357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stubby_cell_during_cellular_hyperosmotic_response","termid":"PBO:0030357"}


id: GO:1902686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of a programmed cell death process.","definition_xrefs":["PMID:20151314","GOC:mtg_apoptosis","GOC:TermGenie","GO_REF:0000060","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability","termid":"GO:0035794"},{"relation_name":"part_of","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0007005","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization involved in programmed cell death","synonyms":[{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent cell death","type":"narrow"},{"name":"MPT involved in PCD","type":"narrow"},{"name":"MPT involved in caspase-independent apoptosis","type":"related"},{"name":"MPT involved in caspase-independent cell death","type":"narrow"},{"name":"MPT involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in programmed cell death","type":"narrow"},{"name":"MPT involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeabilization involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in regulated cell death","type":"related"},{"name":"mitochondrial outer membrane permeabilization during programmed cell death","type":"exact"},{"name":"mitochondrial permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrion outer membrane permeabilization involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in PCD","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of mitochondrial membrane permeability involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in regulated cell death","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in PCD","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in programmed cell death","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in regulated cell death","type":"related"}],"termid":"GO:1902686"}


id: GO:0060552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of fructose 1,6-bisphosphate metabolism. Fructose 1,6-bisphosphate metabolism is the chemical reactions and pathways involving fructose 1,6-bisphosphate, also known as FBP. The D enantiomer is a metabolic intermediate in glycolysis and gluconeogenesis.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"regulation of fructose 1,6-bisphosphate metabolic process","termid":"GO:0060551"},{"relation_name":"positively_regulates","term_name":"fructose 1,6-bisphosphate metabolic process","termid":"GO:0030388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fructose 1,6-bisphosphate metabolic process","termid":"GO:0060552"}


id: GO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a specific transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, transcription factor binding (obsolete GO:0000989)","synonyms":[{"name":"transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0000989"}


id: PBO:0028917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_osmotic_stress","termid":"PBO:0028917"}


id: PBO:0071499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 2","termid":"PBO:0071499"}


id: GO:0010890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of sequestering of triglyceride. Triglyceride sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid storage","termid":"GO:0010884"},{"relation_name":"is_a","term_name":"regulation of triglyceride storage","termid":"GO:0010889"},{"relation_name":"positively_regulates","term_name":"triglyceride storage","termid":"GO:0030730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of triglyceride storage","synonyms":[{"name":"positive regulation of sequestering of triacylglycerol","type":"exact"},{"name":"positive regulation of sequestering of triglyceride","type":"exact"},{"name":"positive regulation of triglyceride sequestration","type":"exact"}],"termid":"GO:0010890"}


id: GO:0071541
data:
  {"annotated_genes":["SJAG_02164","SJAG_03147","SJAG_04891","SJAG_04981","SJAG_04900","SJAG_04744","SJAG_03472","SJAG_02628","SJAG_02995"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59514,74075,74882,75455,94547,96609,97486,98687,105367],"is_not":false,"summary":null,"term":"GO:0071541"}]},"cv_name":"cellular_component","definition":"An eukaryotic translation initiation factor 3 complex that contains the PCI-domain protein eIF3m.","definition_xrefs":["PMID:19061185","PMID:15904532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 3 complex","termid":"GO:0005852"}],"gene_count":9,"genes_by_uniquename":{"SJAG_02164":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex, eIF3m","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"eIF3m-containing eukaryotic translation initiation factor 3 complex","type":"exact"}],"termid":"GO:0071541","terms_by_termid":{"GO:0071541":null}}


id: PBO:0080756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthine dehydrogenase","termid":"PBO:0080756"}


id: PBO:0040218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 3C","termid":"PBO:0040218"}


id: PATO:0000441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's marked by tedious repetition.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repetitive","termid":"PATO:0000441"}


id: PBO:0064417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylethanolamine N-methyltransferase","termid":"PBO:0064417"}


id: GO:0034486
data:
  {"annotated_genes":["SJAG_03401","SJAG_00051","SJAG_03400","SJAG_01990","SJAG_04725","SJAG_00877","SJAG_02029","SJAG_01319","SJAG_03497","SJAG_04698","SJAG_05213","SJAG_03256","SJAG_01080","SJAG_03442","SJAG_01344","SJAG_03899"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73270],"is_not":false,"summary":null,"term":"GO:0034486"},{"annotations":[76859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[109776,102551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[90158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[94352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[117943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[115305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[95827,117945,96809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[97112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[103584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[103586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[97113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[103587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[102553,103588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[97114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[109778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[103590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[103591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[117946,95828,96810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[88864,106434,114259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180042"},{"annotations":[114082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"}]},"cv_name":"biological_process","definition":"The process in which a solute is transported from one side of the vacuolar membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01080":null,"SJAG_01319":null,"SJAG_01344":null,"SJAG_01990":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03401":null,"SJAG_03442":null,"SJAG_03497":null,"SJAG_03899":null,"SJAG_04698":null,"SJAG_04725":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vacuolar transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar membrane transport","type":"exact"}],"termid":"GO:0034486","terms_by_termid":{"GO:0032974":null,"GO:0034486":null,"GO:0034488":null,"GO:0034490":null,"GO:0036246":null,"GO:0036249":null,"GO:0071996":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0140146":null,"GO:0140147":null,"GO:0180042":null,"GO:1901482":null,"GO:1990591":null,"GO:1990818":null}}


id: PBO:0040035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 2","termid":"PBO:0040035"}


id: PBO:0073841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 8 member A1","termid":"PBO:0073841"}


id: FYPO:0003015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to salt stress. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"cell lysis during cellular response to salt stress","synonyms":[{"name":"cell lysis during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to salt stress","type":"exact"},{"name":"inviable, lysed cell during cellular response to salt stress","type":"exact"},{"name":"lysed cell in response to salt stress","type":"exact"}],"termid":"FYPO:0003015"}


id: PBO:0065831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB7A, member RAS oncogene family","termid":"PBO:0065831"}


id: GO:0102389
data:
  {"annotated_genes":["SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61424],"is_not":false,"summary":null,"term":"GO:0102389"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP + a ditrans,polycis-dolichol = NADPH + H+ + a di-trans, poly-cis-polyprenol.","definition_xrefs":["RHEA:34279","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"polyprenol reductase activity","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:0102389","terms_by_termid":{"GO:0102389":null}}


id: FYPO:0001821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a greater than normal number of cells in an originally homothallic (h90) population express P-specific information from the mat1 locus.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased number of heterothallic h+ cells","synonyms":[{"name":"increased amount of heterothallic H+ cells","type":"exact"}],"termid":"FYPO:0001821"}


id: PBO:0089552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transmembrane transporter","termid":"PBO:0089552"}


id: GO:0018399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-phenylalanine to form L-4'-bromophenylalanine.","definition_xrefs":["RESID:AA0176"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination to L-4'-bromophenylalanine (obsolete GO:0018399)","termid":"GO:0018399"}


id: PBO:0090671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S23","termid":"PBO:0090671"}


id: GO:0004122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + L-homocysteine = cystathionine + H2O.","definition_xrefs":["EC:4.2.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cystathionine beta-synthase activity","secondary_identifiers":["MetaCyc:CYSTATHIONINE-BETA-SYNTHASE-RXN","Reactome:R-HSA-1614524","RHEA:10112"],"synonyms":[{"name":"L-serine hydro-lyase (adding homocysteine)","type":"related"},{"name":"L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"related"},{"name":"beta-thionase activity","type":"related"},{"name":"methylcysteine synthase activity","type":"related"},{"name":"serine sulfhydrase activity","type":"related"},{"name":"serine sulfhydrylase activity","type":"related"}],"termid":"GO:0004122"}


id: GO:0045163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which voltage-gated potassium channels become localized together in high densities. In animals, voltage-gated potassium (Kv) channels are clustered beneath the myelin sheath in regions immediately adjacent to paranodes, called juxtaparanodes, and along the inner mesaxon within the internode.","definition_xrefs":["PMID:11456440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ion channel clustering","termid":"GO:0045161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"clustering of voltage-gated potassium channels","synonyms":[{"name":"Kv channel clustering","type":"exact"},{"name":"clustering of voltage gated potassium channels","type":"exact"},{"name":"clustering of voltage-dependent potassium channels","type":"exact"},{"name":"voltage-gated potassium channel clustering","type":"exact"}],"termid":"GO:0045163"}


id: PBO:0065605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTOV1 pseudogene 1","termid":"PBO:0065605"}


id: GO:2001145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphatase activity","termid":"GO:0010923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity","termid":"GO:2001145"}


id: PBO:0064059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 93","termid":"PBO:0064059"}


id: GO:0097233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an alveolar lamellar body, a specialized secretory organelle found in type II pneumocytes and involved in the synthesis, secretion, and reutilization of pulmonary surfactant.","definition_xrefs":["GOC:sl","PMID:11940594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body membrane","termid":"GO:0097232"},{"relation_name":"part_of","term_name":"alveolar lamellar body","termid":"GO:0097208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"alveolar lamellar body membrane","termid":"GO:0097233"}


id: GO:0010195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of microRNA, a large family of 21-22 nucleotide non-coding RNAs with presumed post-transcriptional regulatory activity.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete microRNA biosynthetic process (obsolete GO:0010195)","synonyms":[{"name":"miRNA biosynthesis","type":"exact"},{"name":"miRNA biosynthetic process","type":"exact"},{"name":"microRNA anabolism","type":"exact"},{"name":"microRNA biosynthesis","type":"exact"},{"name":"microRNA biosynthetic process","type":"exact"},{"name":"microRNA formation","type":"exact"},{"name":"microRNA synthesis","type":"exact"}],"termid":"GO:0010195"}


id: FYPO:0002068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize histidine, and therefore requires histidine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for histidine","synonyms":[{"name":"growth auxotrophic for histidine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for histidine during vegetative growth","type":"exact"},{"name":"histidine auxotrophy","type":"exact"}],"termid":"FYPO:0002068"}


id: MONDO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A physical or cognitive mental abnormality caused by maternal alcohol consumption and its toxic effect on the developing embryo during pregnancy.","definition_xrefs":["NCIT:C92727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal alcohol spectrum disorder","termid":"MONDO:0000408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol-related birth defect","secondary_identifiers":["MEDGEN:459973","UMLS:C3146244","DOID:0050668"],"synonyms":[{"name":"ARBD","type":"exact"},{"name":"alcohol related birth defect","type":"exact"}],"termid":"MONDO:0000395","xrefs":{"Monarch":{"xref_id":"0000395"}}}


id: MONDO:1010907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central core myopathy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central core myopathy, non-human animal","termid":"MONDO:1010192"},{"relation_name":"is_a","term_name":"myofibrillar myopathy, horse","termid":"MONDO:1010936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central core myopathy, horse","secondary_identifiers":["OMIA:000172-9796"],"termid":"MONDO:1010907","xrefs":{"Monarch":{"xref_id":"1010907"}}}


id: GO:0010956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of calcidiol 1-monooxygenase activity. Calcidiol 1-monooxygenase activity is the catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vitamin D biosynthetic process","termid":"GO:0010957"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"negative regulation of monooxygenase activity","termid":"GO:0032769"},{"relation_name":"is_a","term_name":"regulation of calcidiol 1-monooxygenase activity","termid":"GO:0060558"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"negative regulation of calcidiol 1-monooxygenase activity","termid":"GO:0010956"}


id: MONDO:0030870
data:
  {"annotated_genes":["SJAG_02339"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85481],"is_not":false,"summary":null,"term":"MONDO:0030870"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1748767","UMLS:C5436889","OMIM:619146","DOID:0080874"],"synonyms":[{"name":"POF17","type":"exact"},{"name":"premature ovarian failure 17","type":"exact"}],"termid":"MONDO:0030870","terms_by_termid":{"MONDO:0030870":null},"xrefs":{"Monarch":{"xref_id":"0030870"}}}


id: PBO:0040450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10D (putative)","termid":"PBO:0040450"}


id: GO:0006858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of substances that occurs outside cells.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"extracellular transport","termid":"GO:0006858"}


id: GO:0035613
data:
  {"annotated_genes":["SJAG_04880","SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101932,109684],"is_not":false,"summary":null,"term":"GO:0035613"}]},"cv_name":"molecular_function","definition":"Binding to a stem-loop in an RNA molecule. An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop.","definition_xrefs":["PMID:20455544","GOC:sart","PMID:16568238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04527":null,"SJAG_04880":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"RNA stem-loop binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA hairpin binding","type":"exact"},{"name":"RNA hairpin loop binding","type":"exact"}],"termid":"GO:0035613","terms_by_termid":{"GO:0035613":null}}


id: MONDO:0005675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital disorder of lambs caused by a virus closely related to or identical with certain strains of bovine viral diarrhea virus.","definition_xrefs":["MESH:D001882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"border disease","secondary_identifiers":["EFO:0007177"],"termid":"MONDO:0005675","xrefs":{"Monarch":{"xref_id":"0005675"}}}


id: PBO:0089943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg2","termid":"PBO:0089943"}


id: MOD:01911
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one chlorine atom.","definition_xrefs":["Unimod:936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated residue","termid":"MOD:00753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochlorinated residue","synonyms":[{"name":"Cl1Res","type":"exact"}],"termid":"MOD:01911"}


id: PBO:0058616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6748","termid":"PBO:0058616"}


id: PBO:0061777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCA2 melanosomal transmembrane protein","termid":"PBO:0061777"}


id: GO:0140222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The enclosed volume within the sealed membrane of a pathogen-containing vacuole.","definition_xrefs":["PMID:26842840","PMID:10560000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-enclosed lumen","termid":"GO:0031974"},{"relation_name":"part_of","term_name":"pathogen-containing vacuole","termid":"GO:0140220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pathogen-containing vacuole lumen","synonyms":[{"name":"lumen of a pathogen-containing vacuole","type":"exact"},{"name":"pathogen inclusion lumen","type":"related"},{"name":"pathogen-containing compartment lumen","type":"exact"},{"name":"pathogen-containing vacuolar lumen","type":"exact"}],"termid":"GO:0140222"}


id: GO:0019170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactaldehyde + NAD+ = methylglyoxal + NADH + H+.","definition_xrefs":["EC:1.1.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"methylglyoxal reductase (NADH) activity","secondary_identifiers":["RHEA:24528","MetaCyc:D-LACTALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(R)-lactaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"D-lactaldehyde dehydrogenase activity","type":"exact"},{"name":"methylglyoxal reductase (NADH-dependent) activity","type":"exact"},{"name":"methylglyoxal reductase activity","type":"exact"}],"termid":"GO:0019170"}


id: FYPO:0003840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to carbendazim (mecarzole; MBC). Cells stop growing (and may die) at a concentration of carbendazim that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to carbendazim","synonyms":[{"name":"hypersensitive to carbendazim","type":"exact"},{"name":"sensitive to MBC","type":"exact"},{"name":"sensitive to carbendazim during mitotic cell cycle","type":"related"},{"name":"sensitive to carbendazim during vegetative growth","type":"exact"},{"name":"sensitive to mecarzole","type":"exact"},{"name":"sensitive to methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"sensitive to methylbenzylcarbamylate","type":"exact"}],"termid":"FYPO:0003840"}


id: PBO:0053969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1280","termid":"PBO:0053969"}


id: GO:0018508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate + NAD+ = catechol + CO2 + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase activity (obsolete GO:0018508)","synonyms":[{"name":"benzoate cis-diol dehydrogenase activity","type":"exact"}],"termid":"GO:0018508"}


id: MONDO:0012039
data:
  {"annotated_genes":["SJAG_02562","SJAG_03494","SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87066,87067,87068],"is_not":false,"summary":null,"term":"MONDO:0012039"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_02562":null,"SJAG_03494":null},"genotype_count":0,"is_obsolete":false,"name":"myocardial infarction, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:318680","OMIM:608446","UMLS:C1832662"],"synonyms":[{"name":"myocardial infarction, decreased susceptibility to","type":"exact"},{"name":"myocardial infarction, protection against","type":"related"},{"name":"myocardial infarction, susceptibility to","type":"exact"},{"name":"myocardial infarction, susceptibility to, 1","type":"related"},{"name":"susceptibility to myocardial infarction","type":"related"}],"termid":"MONDO:0012039","terms_by_termid":{"MONDO:0012039":null},"xrefs":{"Monarch":{"xref_id":"0012039"}}}


id: PBO:0043179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliated left-right organizer metallopeptidase","termid":"PBO:0043179"}


id: GO:0045825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate filament polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of intermediate filament polymerization and/or depolymerization (obsolete GO:0045825)","synonyms":[{"name":"negative regulation of intermediate filament polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045825"}


id: PBO:0112818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphate Quantity Regulator","termid":"PBO:0112818"}


id: GO:0000833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate = ADP + 4,5-bis(diphospho)-1D-myo-inositol (1,2,3,6)tetrakisphosphate.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-diphosphoinositol pentakisphosphate 4-kinase activity","synonyms":[{"name":"IP7 4-kinase activity","type":"exact"},{"name":"diphosphoinositol-pentakisphosphate 4-kinase activity","type":"broad"},{"name":"inositol heptakisphosphate 4-kinase activity","type":"broad"}],"termid":"GO:0000833"}


id: PBO:0004940
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of PIm","termid":"PBO:0004940"}


id: GO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a pathway not requiring TAP (transporter associated with antigen processing). The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","termid":"GO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-independent","synonyms":[{"name":"TAP-independent antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","type":"exact"},{"name":"TAP-independent endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway, TAP-independent","type":"exact"}],"termid":"GO:0002490"}


id: PBO:0055493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2927","termid":"PBO:0055493"}


id: MOD:01471
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to (Z)-dehydrobutyrine.","definition_xrefs":["DeltaMass:0","PubMed:3769923","PubMed:1547888","RESID:AA0182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrobutyrine (Thr)","termid":"MOD:00190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Z)-dehydrobutyrine (Thr)","synonyms":[{"name":"(2Z)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(Z)-2-amino-2-butenoic acid","type":"exact"},{"name":"(Z)-2-aminobutenoic acid","type":"exact"},{"name":"(Z)-dehydrobutyrine","type":"exact"},{"name":"(Z)dHAbu","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"MOD_RES (Z)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"}],"termid":"MOD:01471"}


id: PBO:0116752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit D2","termid":"PBO:0116752"}


id: PBO:0034291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_expresses","termid":"PBO:0034291"}


id: GO:2000712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000712)","synonyms":[{"name":"regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000712"}


id: PBO:0071381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 4","termid":"PBO:0071381"}


id: MONDO:0032625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 21","secondary_identifiers":["GARD:16327","OMIM:618242","UMLS:C4748792","DOID:0112088","MEDGEN:1648383"],"synonyms":[{"name":"MC1DN21","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 21","type":"related"}],"termid":"MONDO:0032625","xrefs":{"Monarch":{"xref_id":"0032625"}}}


id: GO:0019038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The name given to a viral genome after it has been integrated into the host genome; particularly applies to retroviruses and is a required part of the retroviral replication cycle.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete provirus (obsolete GO:0019038)","secondary_identifiers":["Wikipedia:Provirus"],"termid":"GO:0019038"}


id: GO:0019021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome composed of deoxyribonucleic acid.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA viral genome (obsolete GO:0019021)","termid":"GO:0019021"}


id: GO:0031364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from the side chain of an N-terminal asparagine or glutamine residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination","termid":"GO:0031363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid deamination, from side chain","termid":"GO:0031364"}


id: GO:0031458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + a betaine(out) = ADP + phosphate + a betaine(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type betaine transporter activity","synonyms":[{"name":"ABC-type betaine transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent betaine transporter activity","type":"exact"},{"name":"ATPase-coupled betaine transporter activity","type":"related"},{"name":"betaine ABC transporter","type":"narrow"},{"name":"betaine-transporting ATPase activity","type":"exact"}],"termid":"GO:0031458"}


id: GO:1905234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a codeine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24914722","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"},{"relation_name":"is_a","term_name":"response to codeine","termid":"GO:1905233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to codeine","termid":"GO:1905234"}


id: GO:0047484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the response to osmotic stress.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to osmotic stress","termid":"GO:0047484"}


id: PBO:0113212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein protein; co-assembles with Mdm10p into the mitochondrial sorting and assembly machinery (SAM) complex and cooperates with Mdm10p in the assembly of the translocase of the outer membrane (TOM) complex; identified based on homology to the filamentous fungus, <i>Ashbya gossypii</i>; SWAT-GFP and seamless-GFP fusion proteins localize to the mitochondria","termid":"PBO:0113212"}


id: FYPO:0004793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is smaller than normal during mitosis.","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased telomere-nuclear envelope distance during mitotic M phase","synonyms":[{"name":"decreased distance between telomeres and nuclear envelope during mitosis","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during M phase during mitotic cell cycle","type":"related"},{"name":"decreased telomere-nuclear envelope distance during mitosis during vegetative growth","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during mitotic M phase","type":"related"},{"name":"reduced telomere-nuclear envelope distance during mitosis","type":"exact"}],"termid":"FYPO:0004793"}


id: PBO:0059560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1D, pseudogene","termid":"PBO:0059560"}


id: PBO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase Pli1","termid":"PBO:0000655"}


id: PBO:0028924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription","termid":"PBO:0028924"}


id: PBO:0056058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich adaptor protein 1","termid":"PBO:0056058"}


id: SO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence obtained from a single sequencing experiment. Typically a read is produced when a base calling program interprets information from a chromatogram trace file produced from a sequencing machine.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"read","termid":"SO:0000150"}


id: MONDO:0008951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrocortical degeneration of infancy","secondary_identifiers":["MESH:C565863","MEDGEN:347837","UMLS:C1859257","OMIM:213950"],"synonyms":[{"name":"cerebrocortical degeneration of infancy","type":"exact"}],"termid":"MONDO:0008951","xrefs":{"Monarch":{"xref_id":"0008951"}}}


id: PBO:0057898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3200","termid":"PBO:0057898"}


id: PBO:0045672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 2 pseudogene 1","termid":"PBO:0045672"}


id: GO:0010445
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small round nuclear body, measuring 0.2-0.8 microns in diameter that is diffusely distributed throughout the nucleoplasm. Several proteins known to be involved in miRNA processing have been localized to these structures. D-bodies are thought to be involved in primary-miRNA processing and/or storage/assembly of miRNA processing complexes.","definition_xrefs":["PMID:17442570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear dicing body","synonyms":[{"name":"D body","type":"exact"}],"termid":"GO:0010445"}


id: MOD:01285
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to 6x(13)C,1x(15)N isotope labeled L-leucine.","definition_xrefs":["PubMed:12175151","PubMed:11857757","Unimod:695#L","PubMed:11999733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"},{"relation_name":"is_a","term_name":"6x(13)C,1x(15)N labeled residue","termid":"MOD:01370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,1x(15)N labeled L-leucine","synonyms":[{"name":"13C(6) 15N(1) Silac label","type":"related"},{"name":"Label:13C(6)15N(1)","type":"related"}],"termid":"MOD:01285"}


id: GO:0019562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of L-phenylalanine into other compounds, including phosphoenolpyruvate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete L-phenylalanine catabolic process to phosphoenolpyruvate (obsolete GO:0019562)","synonyms":[{"name":"phenylalanine breakdown to phosphoenolpyruvate","type":"exact"},{"name":"phenylalanine degradation to phosphoenolpyruvate","type":"exact"}],"termid":"GO:0019562"}


id: MONDO:1012487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"zinc deficiency-like syndrome, non-human animal","termid":"MONDO:1011758"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc deficiency-like syndrome, cattle","secondary_identifiers":["OMIA:001935-9913"],"termid":"MONDO:1012487","xrefs":{"Monarch":{"xref_id":"1012487"}}}


id: GO:0051225
data:
  {"annotated_genes":["SJAG_00229","SJAG_01224","SJAG_01613","SJAG_04841","SJAG_03073","SJAG_00856","SJAG_02332","SJAG_02886","SJAG_04745","SJAG_07018","SJAG_00794","SJAG_02336","SJAG_04464","SJAG_02609","SJAG_03835","SJAG_01546","SJAG_03540","SJAG_01215","SJAG_03062","SJAG_02045","SJAG_00773","SJAG_01756","SJAG_04901","SJAG_01297","SJAG_02761","SJAG_03116","SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70387,78095,99845,106207,116935],"is_not":false,"summary":null,"term":"GO:0051225"},{"annotations":[75471,77484,95067],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[94530,96526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090306"},{"annotations":[101190,98985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140642"},{"annotations":[96527,102801,98986,73800],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[110334,96628,118405,109359,100745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090307"},{"annotations":[98381,103654,108015,101195,100144,99616,97043],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[101196,98992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[98993,108610,76824,94534,97044],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[111184],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[71185],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.","definition_xrefs":["GOC:tb","GOC:ai","GOC:expert_rg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"},{"relation_name":"part_of","term_name":"chromosome segregation","termid":"GO:0007059"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01756":null,"SJAG_02045":null,"SJAG_02246":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0000226","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"spindle assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051226","GO:0051227"],"synonyms":[{"name":"bipolar spindle biosynthesis","type":"exact"},{"name":"bipolar spindle formation","type":"exact"},{"name":"spindle biosynthesis","type":"exact"},{"name":"spindle formation","type":"exact"}],"termid":"GO:0051225","terms_by_termid":{"GO:0000073":null,"GO:0051225":null,"GO:0051256":null,"GO:0061804":null,"GO:0090306":null,"GO:0090307":null,"GO:0110161":null,"GO:0140641":null,"GO:0140642":null,"GO:1901673":null,"GO:1990810":null}}


id: MONDO:0000665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Apraxia is a neurological disorder characterized by the inability to perform tasks or movements, despite having the desire and physical ability to perform them. It is caused by damage to the brain, especially the parietal lobe, and can arise from many diseases, tumors, a stroke, or traumatic brain injury. In some cases it is present from birth. There are several types of apraxia, which may occur alone or together. These include: Buccofacial or orofacial apraxia is the inability to carry out facial movements on demand. This may include licking the lips, sticking out the tongue, whistling, coughing, or winking. Ideational apraxia is the inability to carryout learned, complex tasks with multiple, sequential movements. This may include dressing, eating, and bathing. Ideomotor apraxia is the inability to perform a learned task (such as using a tool) or communicate using gestures (like waving good-bye). Limb-kinetic apraxia is the inability to make fine, precise movements with an arm or leg. This may include buttoning a shirt or tying a shoe. Verbal apraxia is difficulty coordinating mouth and speech movements. Verbal apraxia may be acquired or present from birth. Constructional apraxia is the inability to copy, draw, or construct simple figures. Oculomotor apraxia is difficulty moving the eyes on command. Treatment of apraxia may include physical, speech, or occupational therapy. If apraxia occurs as a symptom of another disorder, treatment should be directed to the underlying condition.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"agnosia","termid":"MONDO:0005638"},{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apraxia","secondary_identifiers":["DOID:0060135","MEDGEN:8166","ICD10CM:R48.2","MESH:D001072","NCIT:C180557","UMLS:C0003635","icd11.foundation:986651951"],"synonyms":[{"name":"Apraxias","type":"exact"},{"name":"dyspraxia","type":"exact"}],"termid":"MONDO:0000665","xrefs":{"Monarch":{"xref_id":"0000665"}}}


id: PR:Q9P7L3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.10c gene.","definition_xrefs":["UniProtKB:Q9P7L3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.10c","synonyms":[{"name":"2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DARIPP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAROPP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DARP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC21C3.10c","type":"exact"}],"termid":"PR:Q9P7L3"}


id: GO:0009916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidation of ubiquinol by diverting electrons from the standard electron transfer chain, transferring them from ubiquinol to oxygen and generating water as the product.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alternative oxidase activity","termid":"GO:0009916"}


id: GO:0070107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070107"}


id: GO:0009196
data:
  {"annotated_genes":["SJAG_04665","SJAG_00885","SJAG_02874","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107013,95244,92201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009186"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009196","terms_by_termid":{"GO:0006227":null,"GO:0006233":null,"GO:0006240":null}}


id: FYPO:0002080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N-tosyl-L-phenylalanyl chloromethyl ketone (TPCK). Cells stop growing (and may die) at a concentration of TPCK that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to protease inhibitor","termid":"FYPO:0001695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to TPCK","synonyms":[{"name":"hypersensitive to TPCK","type":"exact"},{"name":"sensitive to N-tosyl-L-phenylalanyl chloromethyl ketone","type":"exact"},{"name":"sensitive to TPCK during mitotic cell cycle","type":"related"},{"name":"sensitive to TPCK during vegetative growth","type":"exact"}],"termid":"FYPO:0002080"}


id: MONDO:1011163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis, non-human animal","termid":"MONDO:1010297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, pig","secondary_identifiers":["OMIA:000747-9823"],"termid":"MONDO:1011163","xrefs":{"Monarch":{"xref_id":"1011163"}}}


id: GO:0016073
data:
  {"annotated_genes":["SJAG_04527","SJAG_03179","SJAG_04321","SJAG_03572","SJAG_01176","SJAG_00854","SJAG_01234","SJAG_03745","SJAG_04286","SJAG_04084","SJAG_00559","SJAG_01521","SJAG_02993","SJAG_01958","SJAG_00088","SJAG_00566","SJAG_04824","SJAG_01798","SJAG_04586","SJAG_04818","SJAG_03257","SJAG_00083","SJAG_03984","SJAG_01191","SJAG_04754","SJAG_02156","SJAG_04153","SJAG_00081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70471,70021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"},{"annotations":[94948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[103579,115190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034472"},{"annotations":[107787,90398,115795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016180"},{"annotations":[114036,77579,59161,79971,106049,105988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[71377,71013,72181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034473"},{"annotations":[101926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034474"},{"annotations":[74869,72989,71378,73487,76481,88140,72182,77309,71014,75961,74227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034475"},{"annotations":[89740,71379,71015,72183,98701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034476"},{"annotations":[79156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034477"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving snRNA, small nuclear RNA, any of various low-molecular-mass RNA molecules found in the eukaryotic nucleus as components of the small nuclear ribonucleoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00083":null,"SJAG_00088":null,"SJAG_00559":null,"SJAG_00566":null,"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01234":null,"SJAG_01521":null,"SJAG_01798":null,"SJAG_01958":null,"SJAG_02156":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03257":null,"SJAG_03572":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04286":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04586":null,"SJAG_04754":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"snRNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"snRNA metabolism","type":"exact"}],"termid":"GO:0016073","terms_by_termid":{"GO:0016180":null,"GO:0031120":null,"GO:0034472":null,"GO:0034473":null,"GO:0034474":null,"GO:0034475":null,"GO:0034476":null,"GO:0034477":null,"GO:0071037":null,"GO:0120049":null}}


id: PBO:0048077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain like 17","termid":"PBO:0048077"}


id: GO:1902890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of root hair elongation.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:22329353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"root hair elongation","termid":"GO:0048767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of root hair elongation","termid":"GO:1902890"}


id: MONDO:1011067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, domestic guinea pig","secondary_identifiers":["OMIA:001033-10141"],"termid":"MONDO:1011067","xrefs":{"Monarch":{"xref_id":"1011067"}}}


id: GO:0031870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thromboxane A2 receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thromboxane A2 receptor binding","synonyms":[{"name":"prostanoid TP receptor binding","type":"exact"},{"name":"thromboxane A2 receptor ligand","type":"narrow"}],"termid":"GO:0031870"}


id: GO:0007618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pairwise union of individuals for the purpose of sexual reproduction, ultimately resulting in the formation of zygotes.","definition_xrefs":["GOC:jl","ISBN:0387520546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-organism reproductive process","termid":"GO:0044703"},{"relation_name":"part_of","term_name":"sexual reproduction","termid":"GO:0019953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating","termid":"GO:0007618"}


id: GO:0021583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the pons is generated and organized. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons morphogenesis","termid":"GO:0021583"}


id: GO:1900434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:0036170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:1900434"}


id: GO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of mature proteins from their proproteins by cleavage of the terminal bond of Arg-Xaa-Yaa-Arg-Z motifs where Xaa can be any amino acid and Yaa is Arg or Lys. Releases albumin, complement component C3 and von Willebrand factor from their respective precursors.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete furin activity (obsolete GO:0004276)","synonyms":[{"name":"PACE","type":"related"},{"name":"SPC3","type":"related"},{"name":"dibasic processing enzyme activity","type":"related"},{"name":"furin activity","type":"exact"},{"name":"paired basic amino acid cleaving enzyme","type":"related"},{"name":"paired basic amino acid converting enzyme","type":"related"},{"name":"paired basic amino acid residue cleaving enzyme activity","type":"related"},{"name":"prohormone convertase activity","type":"narrow"},{"name":"serine proteinase PACE","type":"related"}],"termid":"GO:0004276"}


id: PBO:0017946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam8","termid":"PBO:0017946"}


id: MONDO:0859376
data:
  {"annotated_genes":["SJAG_02589","SJAG_02447"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87060,87061],"is_not":false,"summary":null,"term":"MONDO:0859376"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02447":null,"SJAG_02589":null},"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, congenital, 5, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1840908","OMIM:620241","UMLS:C5830272"],"termid":"MONDO:0859376","terms_by_termid":{"MONDO:0859376":null},"xrefs":{"Monarch":{"xref_id":"0859376"}}}


id: PBO:0064358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-melanin concentrating hormone like 1 (pseudogene)","termid":"PBO:0064358"}


id: PBO:0058894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 11401","termid":"PBO:0058894"}


id: GO:0033749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the methyl group from a modified arginine residue at position 3 of the histone H4 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H4 demethylase activity","termid":"GO:0141058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0032452","GO:0140096"],"is_obsolete":false,"name":"histone H4R3 demethylase activity","synonyms":[{"name":"histone H4-methyl-arginine-3 demethylase activity","type":"exact"},{"name":"histone H4R3me demethylase activity","type":"exact"},{"name":"histone demethylase activity (H4-R3 specific)","type":"exact"}],"termid":"GO:0033749"}


id: PBO:0077386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 126B","termid":"PBO:0077386"}


id: GO:0039013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron distal tubule are generated and organized. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"is_a","term_name":"distal tubule morphogenesis","termid":"GO:0072156"},{"relation_name":"part_of","term_name":"pronephric distal tubule development","termid":"GO:0035777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric distal tubule morphogenesis","termid":"GO:0039013"}


id: PBO:0036218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_threonine_phosphorylation_at_Thr-Pro_site_during_vegetative_growth","termid":"PBO:0036218"}


id: PATO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000458 presence value (obsolete PATO:0000458)","termid":"PATO:0000458"}


id: PBO:0091660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate lyase Icl1","termid":"PBO:0091660"}


id: PBO:0069502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 769, pseudogene","termid":"PBO:0069502"}


id: PBO:0036156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation_during_vegetative_growth","termid":"PBO:0036156"}


id: GO:0009182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside diphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate metabolic process","termid":"GO:0009135"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside diphosphate metabolic process","synonyms":[{"name":"purine deoxyribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009182"}


id: PATO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000765 absolute consumption value (obsolete PATO:0000765)","termid":"PATO:0000765"}


id: PBO:0057744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1539","termid":"PBO:0057744"}


id: MONDO:0007643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-A-globulin, defect in assembly of","secondary_identifiers":["OMIM:137050","MEDGEN:342627","UMLS:C1850934","MESH:C564991"],"synonyms":[{"name":"IgA, defect in Assembly of","type":"related"},{"name":"Immunoglobulin A, defect in Assembly of","type":"related"},{"name":"gamma-A-globulin, defect in ASSEMBLY OF","type":"related"}],"termid":"MONDO:0007643","xrefs":{"Monarch":{"xref_id":"0007643"}}}


id: PBO:0040632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BarH like homeobox 1","termid":"PBO:0040632"}


id: MONDO:0012566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 11","secondary_identifiers":["MEDGEN:370932","UMLS:C1970512","OMIM:610836"],"synonyms":[{"name":"AUTS11","type":"exact"},{"name":"autism susceptibility 11","type":"exact"},{"name":"autism, susceptibility to, 11","type":"exact"}],"termid":"MONDO:0012566","xrefs":{"Monarch":{"xref_id":"0012566"}}}


id: GO:0106426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the kainate selective glutamate receptor signaling pathway.","definition_xrefs":["PMID:12597860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"regulates","term_name":"kainate selective glutamate receptor signaling pathway","termid":"GO:0098991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106426"}


id: MOD:01677
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to O4-(N-acetylamino)hexosyl-L-hydroxyproline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O4-(N-acetylamino)hexosyl-L-hydroxyproline","synonyms":[{"name":"(2S,4R)-4-[2-acetamido-2-deoxy-alpha-D-hexopyranosyloxy]pyrrolidine-2-carboxylic acid","type":"exact"},{"name":"4-(N-acetylhexosaminyloxy)proline","type":"exact"},{"name":"4-[(2-N-acetylamino)-alpha-D-hexopyranosyl]oxyproline","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O4-glycosyl-hydroxyproline","type":"exact"},{"name":"O4HexNAcHyPro","type":"exact"},{"name":"alpha-2-(N-acetylamino)hexopyranosyl-4-hydroxyproline","type":"exact"}],"termid":"MOD:01677"}


id: MONDO:1011950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondroma causing progressive posterior paresis, non-human animal","secondary_identifiers":["OMIA:000749"],"termid":"MONDO:1011950","xrefs":{"Monarch":{"xref_id":"1011950"}}}


id: GO:0051069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactomannan, a polysaccharide composed of D-galactose and D-mannose. The mannose units form the backbone structure (a linear main chain) with the D-galactose as single side units.","definition_xrefs":["PMID:30701316","PMID:33012173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substituted mannan metabolic process","termid":"GO:0006080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactomannan metabolic process","synonyms":[{"name":"galactomannan metabolism","type":"exact"}],"termid":"GO:0051069"}


id: GO:0140681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri- or a dimethyl-lysine residue at position 36 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:21914792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K36 demethylase activity","termid":"GO:0051864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0032452"}],"interesting_parent_ids":["GO:0016491","GO:0140096","GO:0003824","GO:0032452","GO:0003674"],"is_obsolete":false,"name":"histone H3K36me2/H3K36me3 demethylase activity","secondary_identifiers":["MetaCyc:RXN-20643","EC:1.14.11.69","RHEA:60236"],"synonyms":[{"name":"histone H3-tri/dimethyl-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3K36me2 demethylase activity","type":"broad"},{"name":"histone H3K36me3 demethylase activity","type":"related"}],"termid":"GO:0140681"}


id: PBO:0029852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0029852"}


id: PATO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the bearer's lacking a phosphate (PO4) group.","direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"PATO:0002262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephosphorylated","termid":"PATO:0002263"}


id: MONDO:0010911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Prolactinoma is a usually benign neoplasm of the pituitary gland that results in hyperprolactinemia. The most common clinical manifestations are amenorrhea and infertility in women; and impotence, decreased libido and infertility in men.","definition_xrefs":["Orphanet:2965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolactin producing pituitary tumor","termid":"MONDO:0003430"},{"relation_name":"is_a","term_name":"familial isolated pituitary adenoma","termid":"MONDO:0017824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin-producing pituitary gland adenoma","secondary_identifiers":["MedDRA:10036832","ICD10CM:D35.2","DOID:5394","NCIT:C3342","ICD10CM:E22.1","MEDGEN:10936","ICDO:8271/0","MESH:D015175","NANDO:1200378","GARD:4508","SCTID:134209002","OMIM:600634","UMLS:C0033375","EFO:1000496"],"synonyms":[{"name":"Forbes-Albright syndrome (formerly)","type":"related"},{"name":"PRL producing pituitary gland adenoma","type":"exact"},{"name":"PRL-secreting pituitary adenoma","type":"exact"},{"name":"PRLoma","type":"exact"},{"name":"familial prolactinoma","type":"exact"},{"name":"lactotrope adenoma","type":"exact"},{"name":"lactotroph adenoma","type":"exact"},{"name":"lactotroph cell adenoma","type":"exact"},{"name":"pituitary adenoma, prolactin-secreting","type":"exact"},{"name":"pituitary gland prolactinoma","type":"exact"},{"name":"pituitary lactotrophic adenoma","type":"exact"},{"name":"pituitary prolactinoma","type":"exact"},{"name":"prolactin producing adenoma of pituitary","type":"exact"},{"name":"prolactin producing adenoma of pituitary gland","type":"exact"},{"name":"prolactin producing adenoma of the pituitary","type":"exact"},{"name":"prolactin producing adenoma of the pituitary gland","type":"exact"},{"name":"prolactin producing pituitary adenoma","type":"exact"},{"name":"prolactin producing pituitary gland adenoma","type":"exact"},{"name":"prolactin secreting adenoma","type":"exact"},{"name":"prolactin secreting adenoma of pituitary","type":"exact"},{"name":"prolactin secreting adenoma of pituitary gland","type":"exact"},{"name":"prolactin secreting adenoma of the pituitary","type":"exact"},{"name":"prolactin secreting adenoma of the pituitary gland","type":"exact"},{"name":"prolactin secreting pituitary adenoma","type":"exact"},{"name":"prolactin secreting pituitary gland adenoma","type":"exact"},{"name":"prolactin-producing pituitary gland adenoma","type":"exact"},{"name":"prolactin-secreting pituitary adenoma","type":"exact"},{"name":"prolactinoma","type":"exact"},{"name":"prolactinoma of pituitary","type":"exact"},{"name":"prolactinoma of pituitary gland","type":"exact"},{"name":"prolactinoma of the pituitary","type":"exact"},{"name":"prolactinoma of the pituitary gland","type":"exact"},{"name":"prolactinoma, familial","type":"related"}],"termid":"MONDO:0010911","xrefs":{"Monarch":{"xref_id":"0010911"}}}


