# terms

id: GO:0050083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S)-3-carboxy-3-hydroxypropanoyl-CoA = acetyl-CoA + glyoxylate.","definition_xrefs":["EC:4.1.3.24","MetaCyc:MALYL-COA-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"malyl-CoA lyase activity","secondary_identifiers":["RHEA:16629"],"synonyms":[{"name":"(3S)-3-carboxy-3-hydroxypropanoyl-CoA glyoxylate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(3S)-3-carboxy-3-hydroxypropanoyl-CoA glyoxylate-lyase activity","type":"related"},{"name":"malyl-coenzyme A lyase activity","type":"related"}],"termid":"GO:0050083"}


id: PBO:0074606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11G","termid":"PBO:0074606"}


id: PBO:0084513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved endoplasmic reticulum membrane complex; involved in efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; interacts with Gal80p; homologous to worm H17B01.4/EMC-1, fly CG2943, and human KIAA0090","termid":"PBO:0084513"}


id: PBO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human HSET","termid":"PBO:0002052"}


id: MONDO:0009264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastroschisis is marked by viscera protruding, without a covering sac, from the fetal abdomen on the right lateral base of the umbilicus. It is due to defective embryo growth and other malformations are only exceptionally associated.","definition_xrefs":["Orphanet:2368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal wall malformation","termid":"MONDO:0100298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastroschisis","secondary_identifiers":["MedDRA:10018046","MESH:D020139","icd11.foundation:551758329","EFO:1000949","MEDGEN:82721","NCIT:C84725","ICD9:756.73","ICD10CM:Q79.3","OMIM:230750","UMLS:C0265706","GARD:8661","SCTID:72951007","NORD:1176","DOID:11044"],"synonyms":[{"name":"abdominal wall defects","type":"related"},{"name":"congenital fissure of the abdominal cavity","type":"related"},{"name":"eventration","type":"broad"},{"name":"gastroschisis","type":"exact"},{"name":"laparoschisis","type":"exact"}],"termid":"MONDO:0009264","xrefs":{"Monarch":{"xref_id":"0009264"}}}


id: MONDO:0004085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A epithelioid cell melanoma that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant choroid melanoma","termid":"MONDO:0003878"},{"relation_name":"is_a","term_name":"epithelioid cell uveal melanoma","termid":"MONDO:0006200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"choroid epithelioid cell melanoma","secondary_identifiers":["UMLS:C1333024","MEDGEN:232360","DOID:7041","NCIT:C6102"],"synonyms":[{"name":"choroid epithelioid cell melanoma","type":"exact"},{"name":"choroidal epithelioid cell melanoma","type":"exact"},{"name":"epithelioid cell melanoma of choroid","type":"exact"},{"name":"epithelioid cell melanoma of optic choroid","type":"exact"},{"name":"epithelioid cell melanoma of the choroid","type":"exact"},{"name":"optic choroid epithelioid cell melanoma","type":"exact"}],"termid":"MONDO:0004085","xrefs":{"Monarch":{"xref_id":"0004085"}}}


id: MONDO:0009108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperdibasic aminoaciduria, type 1 is characterized by increased renal clearance of lysine, ornithine and arginine, in the presence of normal concentrations of cystine. Heterozygous individuals are asymptomatic but homozygotes display intellectual deficit. To date, 25 heterozygotes and one homozygote have been reported.","definition_xrefs":["Orphanet:1032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hyperdibasic aminoaciduria type 1","secondary_identifiers":["UMLS:C2673736","OMIM:222690","MEDGEN:435997","MESH:C567132","GARD:1854","icd11.foundation:1522058907"],"synonyms":[{"name":"dibasic amino aciduria 1","type":"related"},{"name":"dibasic amino aciduria I","type":"related"},{"name":"dibasic amino aciduria type 1","type":"exact"},{"name":"dibasic aminoaciduria 1","type":"related"}],"termid":"MONDO:0009108","xrefs":{"Monarch":{"xref_id":"0009108"}}}


id: PATO:0000794
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000794 immunodeficient value (obsolete PATO:0000794)","termid":"PATO:0000794"}


id: PBO:0027623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_meiosis_I_with_four_spindle_pole_bodies","termid":"PBO:0027623"}


id: GO:0021963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the spinothalamic tract, one of the major routes of nociceptive signaling.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinothalamic tract morphogenesis","synonyms":[{"name":"dorsolateral tract of Lissauer morphogenesis","type":"exact"}],"termid":"GO:0021963"}


id: GO:1900485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein targeting to vacuolar membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein targeting to membrane","termid":"GO:0090314"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuolar membrane","termid":"GO:1900483"},{"relation_name":"is_a","term_name":"positive regulation of vacuolar transport","termid":"GO:1903337"},{"relation_name":"positively_regulates","term_name":"protein targeting to vacuolar membrane","termid":"GO:0044395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"positive regulation of protein targeting to vacuolar membrane","synonyms":[{"name":"activation of protein targeting to vacuolar membrane","type":"narrow"},{"name":"up regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"up-regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"upregulation of protein targeting to vacuolar membrane","type":"exact"}],"termid":"GO:1900485"}


id: PBO:0062265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily F member 2 pseudogene","termid":"PBO:0062265"}


id: MONDO:0022986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare condition characterized by generalized proliferation of pulmonary neuroendocrine cells. It manifests as progressive cough and dyspnea. It is considered a precursor for pulmonary carcinoid tumor.","definition_xrefs":["NCIT:C7437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse idiopathic pulmonary neuroendocrine cell hyperplasia","secondary_identifiers":["Orphanet:617916","icd11.foundation:1480946725","GARD:10780","MEDGEN:232427","UMLS:C1333291"],"synonyms":[{"name":"DIP-NECH","type":"exact"},{"name":"DIPNECH","type":"exact"},{"name":"diffuse idiopathic pulmonary neuroendocrine cell hyperplasia","type":"exact"}],"termid":"MONDO:0022986","xrefs":{"Monarch":{"xref_id":"0022986"}}}


id: PBO:0036246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy/CVT pathway ENTH/VHS domain protein Irs4 (predicted)","termid":"PBO:0036246"}


id: GO:0009884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cytokinin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"cytokinin receptor activity","termid":"GO:0009884"}


id: MONDO:0022939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete deafness hyperuricemia neurologic ataxia (obsolete MONDO:0022939)","termid":"MONDO:0022939","xrefs":{"Monarch":{"xref_id":"0022939"}}}


id: PBO:0053557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 564","termid":"PBO:0053557"}


id: MONDO:0008408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"scapuloperoneal spinal muscular atrophy, autosomal dominant","secondary_identifiers":["DOID:0111552","Orphanet:431255","ICD9:335.19","GARD:10314","EFO:1001992","MEDGEN:148283","SCTID:230248006","OMIM:181405","UMLS:C0751335"],"synonyms":[{"name":"SPSMA","type":"exact"},{"name":"amyotrophy, neurogenic scapuloperoneal, New England type","type":"related"},{"name":"neurogenic scapuloperoneal amyotrophy, New England type","type":"exact"},{"name":"scapuloperoneal neuronopathy","type":"exact"},{"name":"scapuloperoneal spinal muscular atrophy","type":"exact"}],"termid":"MONDO:0008408","xrefs":{"Monarch":{"xref_id":"0008408"}}}


id: GO:0052531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of fluxes of calcium ions that occur as part of the defense response of a host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium ion flux (obsolete GO:0052531)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont Ca2+ flux","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont calcium ion flux","type":"exact"}],"termid":"GO:0052531"}


id: MONDO:0035660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAO1-related developmental delay-seizures-movement disorder spectrum","secondary_identifiers":["UMLS:C5680303","Orphanet:592564","ICD10CM:F84.8","GARD:22369","MEDGEN:1830103"],"synonyms":[{"name":"GNAO1-related spectrum","type":"exact"}],"termid":"MONDO:0035660","xrefs":{"Monarch":{"xref_id":"0035660"}}}


id: PBO:0089893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxyl reductase (NADPH-dependent)","termid":"PBO:0089893"}


id: GO:0086085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of an SA cardiomyocyte with an atrial cardiomyocyte and contributes to the communication between the two cells.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0098631","GO:0003674"],"is_obsolete":false,"name":"cell adhesive protein binding involved in SA cardiac muscle cell-atrial cardiac muscle cell communication","synonyms":[{"name":"cell adhesive protein binding involved in SA cardiomyocyte-atrial cardiomyocyte communication","type":"exact"}],"termid":"GO:0086085"}


id: PBO:0042443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 3","termid":"PBO:0042443"}


id: MONDO:0015049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solitary necrotic tumor of the liver is a rare nonmalignant hepatic lesion characterized by a mass with a completely necrotic core often partially calcified, surrounded by a dense hyalinized fibrous capsule containing elastin fibers. Patients are usually asymptomatic but some may suffer from intermittent abdominal pain or discomfort.","definition_xrefs":["Orphanet:100035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"solitary necrotic nodule of the liver","secondary_identifiers":["SCTID:447058001","MEDGEN:755361","UMLS:C2960192","icd11.foundation:209168589","GARD:19743"],"synonyms":[{"name":"hepatic solitary necrotic nodule","type":"exact"}],"termid":"MONDO:0015049","xrefs":{"Monarch":{"xref_id":"0015049"}}}


id: MOD:01970
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl glutamic acid, forming an isopeptide bond with a free glutamic acid.","definition_xrefs":["Unimod:450","PubMed:15525938","PubMed:10747868","PubMed:1680872","RESID:AA0612","PubMed:23434852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl glutamic acid","synonyms":[{"name":"(2S)-2-([(4S)-4-amino-4-carboxybutanoyl]amino)pentanedioic acid","type":"exact"},{"name":"(2S)-2-[(4S)-4-amino-4-carboxybutanamido]pentanedioic acid","type":"exact"},{"name":"2-([4-azanyl-4-carboxybutanoyl]azanyl)pentanedioic acid","type":"exact"},{"name":"5-glutamyl glutamic acid","type":"exact"},{"name":"Glu","type":"related"},{"name":"MOD_RES 5-glutamyl glutamate","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-Glu","type":"exact"},{"name":"N-(gamma-L-glutamyl)-L-glutamic acid","type":"exact"},{"name":"gamma-glutamylglutamate","type":"exact"},{"name":"isoglutamyl glutamic acid","type":"exact"},{"name":"isoglutamyl monoglutamic acid","type":"exact"},{"name":"monoglutamyl","type":"related"}],"termid":"MOD:01970"}


id: PBO:0070481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 16","termid":"PBO:0070481"}


id: PBO:0040265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase","termid":"PBO:0040265"}


id: MONDO:0020284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete heart position anomaly (obsolete MONDO:0020284)","secondary_identifiers":["Orphanet:98716"],"termid":"MONDO:0020284","xrefs":{"Monarch":{"xref_id":"0020284"}}}


id: GO:0070662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mast cell population by cell division.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell proliferation","termid":"GO:0070662"}


id: PBO:0066920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 222","termid":"PBO:0066920"}


id: MONDO:0011308
data:
  {"annotated_genes":["SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85722],"is_not":false,"summary":null,"term":"MONDO:0011308"}]},"cv_name":"mondo","definition":"GRACILE syndrome is an inherited lethal mitochondrial disorder characterized by fetal growth restriction (GR), aminoaciduria (A), cholestasis (C), iron overload (I), lactacidosis (L), and early death (E).","definition_xrefs":["Orphanet:53693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01405":null},"genotype_count":0,"is_obsolete":false,"name":"GRACILE syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537934","SCTID:703388005","GARD:1","OMIM:603358","ICD9:759.89","MEDGEN:400428","UMLS:C1864002","DOID:0111455"],"synonyms":[{"name":"FLNMS","type":"related"},{"name":"Fellman disease","type":"exact"},{"name":"Fellman syndrome","type":"related"},{"name":"Finnish lactic acidosis with hepatic hemosiderosis","type":"related"},{"name":"Finnish lethal neonatal metabolic syndrome","type":"related"},{"name":"Growth delay-aminoaciduria-cholestasis-iron overload-lactic acidosis-early death syndrome","type":"exact"},{"name":"Growth restriction-aminoaciduria-cholestasis-iron overload-lactic acidosis-early death syndrome","type":"exact"},{"name":"Growth retardation, amino aciduria, cholestasis, iron overload, lactic acidosis, and early death","type":"related"},{"name":"Growth retardation, aminoaciduria, cholestasis, iron overload, lactic acidosis and early death","type":"related"},{"name":"gracile syndrome","type":"exact"},{"name":"lactic acidosis, Finnish, with hepatic hemosiderosis","type":"related"}],"termid":"MONDO:0011308","terms_by_termid":{"MONDO:0011308":null},"xrefs":{"Monarch":{"xref_id":"0011308"}}}


id: FYPO:0006047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between sister kinetochores is smaller than normal before the onset of mitotic anaphase.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal centromere localization","termid":"FYPO:0001778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased interkinetochore distance before mitotic anaphase","synonyms":[{"name":"decreased distance between mitotic kinetochores","type":"related"},{"name":"decreased interkinetochore distance before anaphase during mitotic cell cycle","type":"related"},{"name":"decreased interkinetochore distance before anaphase onset","type":"exact"},{"name":"decreased interkinetochore distance before mitotic anaphase during vegetative growth","type":"exact"},{"name":"decreased kinetochore stretching before mitotic anaphase","type":"related"},{"name":"decreased sister kinetochore distance before mitotic anaphase","type":"exact"},{"name":"reduced interkinetochore distance before mitotic anaphase","type":"exact"}],"termid":"FYPO:0006047"}


id: _global:regulates_o_has_input
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the has_input relation","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_has_input","secondary_identifiers":["GOREL:0001030"],"termid":"_global:regulates_o_has_input"}


id: PR:Q9P792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbr1 gene.","definition_xrefs":["UniProtKB:Q9P792","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZZ-type zinc finger-containing protein P35G2.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.11c","synonyms":[{"name":"Spom972h-nbr1","type":"exact"}],"termid":"PR:Q9P792"}


id: PATO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of having not yet acquired a special structure of function.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undifferentiated","termid":"PATO:0002100"}


id: MONDO:0001097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile glaucoma (obsolete MONDO:0001097)","termid":"MONDO:0001097","xrefs":{"Monarch":{"xref_id":"0001097"}}}


id: PBO:0041684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calbindin 1","termid":"PBO:0041684"}


id: PBO:0051413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-51","termid":"PBO:0051413"}


id: MONDO:0019256
data:
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id: PBO:0091986
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id: MONDO:0001444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by Trypanosoma cruzi. It is transmitted by insect bites. It is characterized by an acute and chronic phase; in the acute phase patients may have fever, malaise, and swelling at the site of the insect bite. In the chronic phase patients develop hepatosplenomegaly, lymphadenopathy, cardiomyopathy and arrhythmias.","definition_xrefs":["NCIT:C84629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanosomiasis","termid":"MONDO:0000940"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chagas disease","secondary_identifiers":["ICD9:086.2","MESH:D014355","SCTID:77506005","GARD:18795","MedDRA:10001935","DOID:12140","ICD10CM:B57","MEDGEN:11935","Orphanet:3386","UMLS:C0041234","icd11.foundation:1365585570"],"synonyms":[{"name":"American trypanosomiasis","type":"related"},{"name":"Chagas disease","type":"exact"},{"name":"Chagas' disease","type":"exact"},{"name":"Chagas' disease with digestive system involvement","type":"exact"},{"name":"Chagas' disease with nervous system involvement","type":"exact"},{"name":"Chagas' disease with other organ involvement","type":"exact"},{"name":"Chagas-mazza disease","type":"related"},{"name":"Trypanosoma cruzi caused disease or disorder","type":"exact"},{"name":"Trypanosoma cruzi disease or disorder","type":"exact"},{"name":"Trypanosoma cruzi infectious disease","type":"exact"},{"name":"infection by trypanosoma cruzi","type":"exact"},{"name":"infection caused by trypanosoma cruzi","type":"related"},{"name":"south American trypanosomiasis","type":"related"}],"termid":"MONDO:0001444","xrefs":{"Monarch":{"xref_id":"0001444"}}}


id: GO:0102706
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id: PBO:0063441
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id: GO:0031924
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id: PBO:0055467
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2900","termid":"PBO:0055467"}


id: PBO:0058824
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8054","termid":"PBO:0058824"}


id: PBO:0074123
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A6 pseudogene 1","termid":"PBO:0074123"}


id: PBO:0076898
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 52","termid":"PBO:0076898"}


id: MONDO:0025510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granulomatous disease caused by the aquatic organism pythium insidiosum and occurring primarily in horses, cattle, dogs, cats, and fishes. It is classified into three forms: ocular, cutaneous, and arterial.","definition_xrefs":["MESH:D058968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease, non-human animal","termid":"MONDO:0700049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pythiosis, non-human animal","termid":"MONDO:0025510","xrefs":{"Monarch":{"xref_id":"0025510"}}}


id: GO:0072355
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id: PBO:0080296
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 60 pseudogene","termid":"PBO:0080296"}


id: PBO:0078912
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id: FYPO:0006038
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id: GO:0051143
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propanediol, CH3-CHOH-CH2OH, a sweet, colorless, viscous, hygroscopic liquid used as an antifreeze, in brake fluid and as a humectant in cosmetics and personal care items.","definition_xrefs":["PMID:15995211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycol metabolic process","termid":"GO:0042844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"propanediol metabolic process","synonyms":[{"name":"1,2-dihydroxypropane metabolic process","type":"exact"},{"name":"1,2-dihydroxypropane metabolism","type":"exact"},{"name":"propanediol metabolism","type":"exact"},{"name":"propylene glycol metabolic process","type":"exact"},{"name":"propylene glycol metabolism","type":"exact"}],"termid":"GO:0051143"}


id: GO:0043240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of the Fanconi anaemia (FA) proteins including A, C, E, G and F (FANCA-F). Functions in the activation of the downstream protein FANCD2 by monoubiquitylation, and is essential for protection against chromosome breakage.","definition_xrefs":["PMID:12093742","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Fanconi anaemia nuclear complex","synonyms":[{"name":"FA complex","type":"exact"},{"name":"FA core complex","type":"exact"},{"name":"FA nuclear complex","type":"exact"},{"name":"Fanconi anaemia complex","type":"exact"}],"termid":"GO:0043240"}


id: MONDO:0009071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary renal hypouricemia (HRH) is a rare autosomal recessively inherited renal membrane transport disorder affecting urate reabsorption in the proximal tubules leading to usually asymptomatic hypouricemia and predisposing to urolithiasis and exercise induced acute renal failure (EIARF).","definition_xrefs":["Orphanet:94088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hereditary renal hypouricemia","secondary_identifiers":["MESH:C537757","MEDGEN:1643078","UMLS:C4551590","GARD:9496","icd11.foundation:479364233","ICD9:790.6","SCTID:236478009"],"synonyms":[{"name":"Dalmatian hypouricemia","type":"related"},{"name":"hypouricemia, renal","type":"related"},{"name":"renal hypouricemia","type":"related"}],"termid":"MONDO:0009071","xrefs":{"Monarch":{"xref_id":"0009071"}}}


id: PR:Q9P4X3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp7 gene.","definition_xrefs":["UniProtKB:Q9P4X3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.03c","synonyms":[{"name":"Spom972h-utp7","type":"exact"},{"name":"U three protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P4X3"}


id: PBO:0048264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 2","termid":"PBO:0048264"}


id: PATO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an entire population or part of a population.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"population quality","termid":"PATO:0002003"}


id: PBO:0069451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 716, pseudogene","termid":"PBO:0069451"}


id: PBO:0064093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pitrilysin metallopeptidase 1","termid":"PBO:0064093"}


id: GO:0044136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring on or near its host rhizosphere. The host rhizosphere is defined as total below-ground surfaces of a plant as a habitat for its symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont on or near host rhizosphere (obsolete GO:0044136)","termid":"GO:0044136"}


id: PBO:0082185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol acetyltransferase; may play a role in steroid detoxification; forms volatile esters during fermentation, which is important for brewing and winemaking","termid":"PBO:0082185"}


id: PBO:0056043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor tyrosine kinase","termid":"PBO:0056043"}


id: PBO:0027232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_hydroxyurea","termid":"PBO:0027232"}


id: PBO:0086388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cell wall mannoprotein; member of the Srp1p/Tip1p family of serine-alanine-rich proteins; transcription is induced by cold shock and anaerobiosis; TIR2 has a paralog, TIR3, that arose from the whole genome duplication","termid":"PBO:0086388"}


id: PBO:0076904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX101 pseudogene 1","termid":"PBO:0076904"}


id: GO:0090616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["PMID:25181358","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 3'-end processing","termid":"GO:0000965"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mitochondrial mRNA 3'-end processing","termid":"GO:0090616"}


id: PBO:0089281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucanosyltransferase Gas2","termid":"PBO:0089281"}


id: MONDO:1012547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous degeneration, non-human animal","termid":"MONDO:1012002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitreous degeneration, dog","secondary_identifiers":["OMIA:002409-9615"],"termid":"MONDO:1012547","xrefs":{"Monarch":{"xref_id":"1012547"}}}


id: PBO:0052499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 11","termid":"PBO:0052499"}


id: FYPO:0009033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of dihydrocoumarin than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to dihydrocoumarin","synonyms":[{"name":"resistance to dihydrocoumarin during mitotic cell cycle","type":"related"},{"name":"resistance to dihydrocoumarin during vegetative growth","type":"exact"},{"name":"resistant to dihydrocoumarin","type":"exact"}],"termid":"FYPO:0009033"}


id: PBO:0079804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B25, pseudogene","termid":"PBO:0079804"}


id: PBO:0035779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitosis","termid":"PBO:0035779"}


id: MONDO:0700183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reticulum cell sarcoma that occurs in a cat.","definition_xrefs":["NCIT:C135008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"lymphoid system disorder, non-human animal","termid":"MONDO:1011330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline reticulum cell sarcoma","termid":"MONDO:0700183","xrefs":{"Monarch":{"xref_id":"0700183"}}}


id: PBO:0113549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zpr1p co-chaperone; recognizes eEF1A in GTP-bound, pre-hydrolysis conformation, dampens folding complex GTPase activity to drive client release from Zpr1p","termid":"PBO:0113549"}


id: GO:0098516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which high humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of high humidity","termid":"GO:0098516"}


id: PR:Q09810
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylyltransferase and sulfurtransferase MOCS3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00323","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyltransferase and sulfurtransferase uba4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.10c","secondary_identifiers":["UniProtKB:Q09810"],"synonyms":[{"name":"Spom972h-MOCS3","type":"exact"},{"name":"ubiquitin-like protein activator 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09810"}


id: GO:1901984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein acetylation.","definition_xrefs":["PMID:22117195","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein acetylation","termid":"GO:1901983"},{"relation_name":"negatively_regulates","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein acetylation","synonyms":[{"name":"down regulation of protein acetylation","type":"exact"},{"name":"down regulation of protein amino acid acetylation","type":"exact"},{"name":"down-regulation of protein acetylation","type":"exact"},{"name":"down-regulation of protein amino acid acetylation","type":"exact"},{"name":"downregulation of protein acetylation","type":"exact"},{"name":"downregulation of protein amino acid acetylation","type":"exact"},{"name":"inhibition of protein acetylation","type":"narrow"},{"name":"inhibition of protein amino acid acetylation","type":"narrow"},{"name":"negative regulation of protein amino acid acetylation","type":"exact"}],"termid":"GO:1901984"}


id: MOD:01081
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-glycosyloxy- (of lysine) or beta-glycosyloxy- (of phenylalanine or tyrosine)","termid":"MOD:01081"}


id: PBO:0056275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1C member 1","termid":"PBO:0056275"}


id: GO:0061778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transmembrane transfer of chloride across the membrane of an intracellular compartment. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:dph","PMID:23092411"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular chloride channel activity (obsolete GO:0061778)","termid":"GO:0061778"}


id: RO:0009002
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"\\\"has substance removed\\\" is a relation existing between two physical entities in which the first entity has had the second entity (a substance) removed from it at some point in time.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_substance_removed","termid":"RO:0009002"}


id: MONDO:0007013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inability to achieve and maintain an erection (erectile dysfunction) due to defects in the arterial blood flow to the penis, defect in venous occlusive function allowing blood drainage (leakage) from the erectile tissue (corpus cavernosum penis), or both.","definition_xrefs":["MESH:D018783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erectile dysfunction","termid":"MONDO:0005362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasculogenic impotence","secondary_identifiers":["MEDGEN:69309","DOID:4762","UMLS:C0243000"],"termid":"MONDO:0007013","xrefs":{"Monarch":{"xref_id":"0007013"}}}


id: MONDO:0007827
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85042,85041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011577"}]},"cv_name":"mondo","definition":"A slowly progressive degenerative inflammatory disorder of skeletal muscles characterized by late onset weakness of specific muscles and distinctive histopathological features.","definition_xrefs":["Orphanet:611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"inclusion body myositis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:359.71","MedDRA:10066407","ICD9:729.1","NANDO:1200032","NORD:1734","MEDGEN:68659","SCTID:72315009","DOID:3429","OMIM:147421","EFO:0007323","NCIT:C84786","MESH:D018979","NANDO:1200218","UMLS:C0238190","GARD:3896"],"synonyms":[{"name":"IBM","type":"exact"},{"name":"Ibm","type":"related"},{"name":"Sporadic Inclusion Body Myositis","type":"exact"},{"name":"inclusion body myositis","type":"exact"},{"name":"inflammatory myopathy","type":"related"},{"name":"sIBM","type":"exact"},{"name":"sporadic inclusion body myositis","type":"exact"}],"termid":"MONDO:0007827","terms_by_termid":{"MONDO:0011577":null},"xrefs":{"Monarch":{"xref_id":"0007827"}}}


id: GO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem development, the biological process whose specific outcome is the progression of the meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem development","termid":"GO:0048509"}


id: GO:0050916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a sweet taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of sweet taste","synonyms":[{"name":"sweet taste perception","type":"exact"}],"termid":"GO:0050916"}


id: PBO:0034272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-attached_to_part_of","termid":"PBO:0034272"}


id: GO:0104005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A function that was not selected for in the evolution of an organism, but arises from co-option by another organism, e.g. a human protein used as a virus receptor.","definition_xrefs":["GOC:pdt"],"gene_count":0,"genotype_count":0,"name":"obsolete hijacked molecular function (obsolete GO:0104005)","termid":"GO:0104005"}


id: GO:0046256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4,6-trinitrotoluene metabolic process","termid":"GO:0018974"},{"relation_name":"is_a","term_name":"trinitrotoluene catabolic process","termid":"GO:0046260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,4,6-trinitrotoluene catabolic process","synonyms":[{"name":"2,4,6-trinitrotoluene breakdown","type":"exact"},{"name":"2,4,6-trinitrotoluene catabolism","type":"exact"},{"name":"2,4,6-trinitrotoluene degradation","type":"exact"}],"termid":"GO:0046256"}


id: MONDO:1012919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any XY sex reversal that occurs in Chinook salmon due to a mutation in the sdY gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY sex reversal, sdY-related, Chinook salmon","secondary_identifiers":["OMIA:002531-74940"],"termid":"MONDO:1012919","xrefs":{"Monarch":{"xref_id":"1012919"}}}


id: GO:1904914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of the localization of a protein-containing macromolecular complex to a telomere.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:rph","GOC:BHF_telomere","GOC:TermGenie","PMID:26586433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of establishment of protein-containing complex localization to telomere","termid":"GO:1904913"},{"relation_name":"negatively_regulates","term_name":"establishment of protein-containing complex localization to telomere","termid":"GO:0097695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of protein-containing complex localization to telomere","synonyms":[{"name":"down regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"down regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"down-regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"down-regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"downregulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"downregulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"inhibition of establishment of macromolecular complex localisation to telomere","type":"narrow"},{"name":"inhibition of establishment of macromolecular complex localization to telomere","type":"narrow"},{"name":"negative regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"negative regulation of establishment of macromolecular complex localization to telomere","type":"related"}],"termid":"GO:1904914"}


id: GO:0036455
data:
  {"annotated_genes":["SJAG_03701"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117602],"is_not":false,"summary":null,"term":"GO:0036455"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a iron-sulfur cluster from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03701":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"iron-sulfur transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2564828"],"synonyms":[{"name":"Fe-S transferase activity","type":"exact"}],"termid":"GO:0036455","terms_by_termid":{"GO:0036455":null}}


id: MONDO:0006084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete angioleiomyoma (obsolete MONDO:0006084)","termid":"MONDO:0006084","xrefs":{"Monarch":{"xref_id":"0006084"}}}


id: FYPO:0006946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and contains more than one septum. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multiseptate vegetative cell","termid":"FYPO:0001494"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"},{"relation_name":"is_a","term_name":"swollen elongated multiseptate vegetative cell","termid":"FYPO:0007436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000005","FYPO:0000631","FYPO:0001320","FYPO:0000004","FYPO:0000032","FYPO:0001985"],"is_obsolete":false,"name":"inviable swollen elongated multiseptate vegetative cell","synonyms":[{"name":"inviable large elongated multiseptate vegetative cell","type":"related"},{"name":"lethal; swollen elongated multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0006946"}


id: GO:0043866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + sulfite + thioredoxin disulfide = 5'-adenylyl sulfate + thioredoxin.","definition_xrefs":["EC:1.8.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"adenylyl-sulfate reductase (thioredoxin) activity","secondary_identifiers":["RHEA:21976"],"synonyms":[{"name":"AMP, sulfite:thioredoxin-disulfide oxidoreductase (adenosine-5'-phosphosulfate-forming)","type":"exact"},{"name":"AMP,sulfite:thioredoxin-disulfide oxidoreductase (adenosine-5'-phosphosulfate-forming)","type":"related"},{"name":"thioredoxin-dependent 5'-adenylylsulfate reductase activity","type":"exact"}],"termid":"GO:0043866"}


id: PBO:0015216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, ubiquitin-protein ligase E3","termid":"PBO:0015216"}


id: GO:0018676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4S)-limonene + O2 + reduced [NADPH--hemoprotein reductase] = (4S)-perillyl alcohol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:23432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"},{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(S)-limonene 7-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02470","EC:1.14.14.52","MetaCyc:--LIMONENE-7-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0728"],"synonyms":[{"name":"(-)-limonene 7-monooxygenase activity","type":"exact"}],"termid":"GO:0018676"}


id: PBO:0045035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted in schizophrenia 2","termid":"PBO:0045035"}


id: GO:0018029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The palmitoylation of peptidyl-lysine to form peptidyl-N6-palmitoyl-L-lysine.","definition_xrefs":["RESID:AA0077"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine palmitoylation (obsolete GO:0018029)","termid":"GO:0018029"}


id: MONDO:1010896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lysosomal storage disease consistent with sphingomyelin lipidosis that occurs in raccoons.","definition_xrefs":["PMID:23582974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin lipidosis, raccoon","secondary_identifiers":["OMIA:001795-9654"],"synonyms":[{"name":"Niemann-Pick disease, type A, raccoon","type":"related"}],"termid":"MONDO:1010896","xrefs":{"Monarch":{"xref_id":"1010896"}}}


id: GO:0060124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth hormone secretion","termid":"GO:0060123"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"growth hormone secretion","termid":"GO:0030252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of growth hormone secretion","termid":"GO:0060124"}


id: PBO:0066753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 51","termid":"PBO:0066753"}


id: GO:0086064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels and contributes to the process of cardiac conduction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling","termid":"GO:0010644"},{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}


id: GO:0015339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Co2+)(out) = (Zn2+ or Co2+)(in). The activity is driven by proton motive force, possibly by proton symport.","definition_xrefs":["TC:2.A.4.2.1"],"gene_count":0,"genotype_count":0,"name":"obsolete cobalt, zinc uptake permease activity (obsolete GO:0015339)","synonyms":[{"name":"cobalt, zinc uptake permease activity","type":"exact"}],"termid":"GO:0015339"}


id: PBO:0040072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain containing 1","termid":"PBO:0040072"}


id: FYPO:0002253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in the normal location at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal septum location","synonyms":[{"name":"normal septum location during mitotic cell cycle","type":"related"},{"name":"normal septum location during vegetative growth","type":"exact"},{"name":"normal septum position","type":"related"},{"name":"normally localized septum","type":"exact"}],"termid":"FYPO:0002253"}


id: GO:0097681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An instance of double-strand break repair via nonhomologous end joining that is independent of factors important for V(D)J recombination (as opposed to classical nonhomologous end joining). It often results in a deletion with microhomology (i.e. 5-25bp homology) at the repair junction. Among different subclasses of nonhomologous end joining (NHEJ), alternative NHEJ appears to play a significant role in the etiology of mutations that arise during cancer development and treatment.","definition_xrefs":["PMID:18584027","Wikipedia:Microhomology-mediated_end_joining","PMID:21655080","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"double-strand break repair via alternative nonhomologous end joining","synonyms":[{"name":"A-NHEJ","type":"related"},{"name":"MMEJ","type":"related"},{"name":"alt-NHEJ","type":"related"},{"name":"double-strand break repair via microhomology-mediated end joining","type":"exact"}],"termid":"GO:0097681"}


id: GO:0080193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral growth of the older parts of a stem that occurs when the central parenchyma cells and the not yet fully differentiated fiber cells of the bundle sheaths continue to undergo cell division and expansion for a long period of time, leading to an increase in girth of the stem.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral growth","termid":"GO:0080190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diffuse secondary thickening","termid":"GO:0080193"}


id: PBO:0082002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 3","termid":"PBO:0082002"}


id: PR:P22987
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kin1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P22987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase kin1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.06","synonyms":[{"name":"Spom972h-kin1","type":"exact"}],"termid":"PR:P22987"}


id: MONDO:0008714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrofacial dysostosis Rodriguez type is a multiple malformative syndrome in which mandibulofacial dysostosis and severe limb reduction defects are associated with complex malformations of different organs and systems especially the CNS, urogenital tract, heart, and lungs. The mandibulofacial defect, characterized by extremely severe microretrognathism and cleft palate, causes death by respiratory distress. Limb reduction is severe and includes shoulder and pelvis hypoplasia, phocomelia with humerus hypoplasia, absent radius and ulna, complete absence of long bones of the legs, and various hand anomalies, predominantly preaxial reduction (absent thumbs). Other features include CNS malformations (agenesis of corpus callosum and acqueductal stenosis), lung anomalies (absent lung lobulation), complex cardiac malformations, and unicornis uterus. These infants also show facial dysmorphism and ear anomalies. The condition is a rare with an autosomal recessive mode of inheritance. The prognosis is poor and this condition leads to death in utero or shortly after birth.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrofacial dysostosis Rodriguez type","secondary_identifiers":["OMIM:201170","GARD:496","MEDGEN:349730","DOID:0060383","MESH:C538183","UMLS:C1860119","Orphanet:1788","SCTID:720430002"],"synonyms":[{"name":"Rodriguez lethal acrofacial dysostosis syndrome","type":"related"},{"name":"acrofacial dysostosis syndrome of Rodriguez","type":"related"},{"name":"acrofacial dysostosis, Rodríguez type","type":"related"},{"name":"acrofacial dysostosis, syndrome of Rodriguez","type":"exact"}],"termid":"MONDO:0008714","xrefs":{"Monarch":{"xref_id":"0008714"}}}


id: MONDO:0008398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salivary substance, Clostridium botulinum type","secondary_identifiers":["UMLS:C1867056","OMIM:180950","MEDGEN:356679"],"synonyms":[{"name":"salivary substance, Clostridium botulinum type","type":"exact"}],"termid":"MONDO:0008398","xrefs":{"Monarch":{"xref_id":"0008398"}}}


id: PBO:0064705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 41","termid":"PBO:0064705"}


id: PBO:0080863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 4","termid":"PBO:0080863"}


id: PBO:0044147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CST telomere replication complex component 1","termid":"PBO:0044147"}


id: MONDO:0019692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple epiphyseal dysplasia and pseudoachondroplasia (obsolete MONDO:0019692)","secondary_identifiers":["Orphanet:93429","icd11.foundation:2078345611"],"termid":"MONDO:0019692","xrefs":{"Monarch":{"xref_id":"0019692"}}}


id: GO:1905058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any calcium-induced calcium release activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["PMID:23639769","GO_REF:0000061","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-induced calcium release activity","termid":"GO:0048763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"calcium-induced calcium release activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium-induced calcium release activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:1905058"}


id: GO:0061072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the iris is generated and organized. The iris is an anatomical structure in the eye whose opening forms the pupil. The iris is responsible for controlling the diameter and size of the pupil and the amount of light reaching the retina.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iris morphogenesis","termid":"GO:0061072"}


id: GO:0047520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-cis-retinyl palmitate + H2O = 11-cis-retinol + H+ + palmitate.","definition_xrefs":["RHEA:19697","EC:3.1.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"11-cis-retinyl-palmitate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R03049","MetaCyc:11-CIS-RETINYL-PALMITATE-HYDROLASE-RXN","Reactome:R-HSA-2465941"],"synonyms":[{"name":"11-cis-retinol palmitate esterase activity","type":"related"},{"name":"11-cis-retinyl-palmitate acylhydrolase activity","type":"related"},{"name":"RPH","type":"related"}],"termid":"GO:0047520"}


id: MONDO:1010916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopathy that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"myopathy, non-human animal","termid":"MONDO:1010195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy, chicken","secondary_identifiers":["OMIA:000693-9031"],"termid":"MONDO:1010916","xrefs":{"Monarch":{"xref_id":"1010916"}}}


id: PR:P04689
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atb2 gene.","definition_xrefs":["UniProtKB:P04689","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha-2 chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.05c","synonyms":[{"name":"Spom972h-atb2","type":"exact"}],"termid":"PR:P04689"}


id: GO:0061520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a Langerhans cell.","definition_xrefs":["GOC:dph","PMID:22729249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell differentiation","termid":"GO:0043011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Langerhans cell differentiation","termid":"GO:0061520"}


id: GO:1990179
data:
  {"annotated_genes":["SJAG_02831","SJAG_00279","SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92091,110552,118382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the actomyosin contractile ring.","definition_xrefs":["PMID:23349808","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_02831":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actomyosin contractile ring","type":"exact"}],"termid":"GO:1990179","terms_by_termid":{"GO:1904498":null}}


id: MONDO:0957578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 10","secondary_identifiers":["MEDGEN:1847819","OMIM:620484","UMLS:C5882682"],"termid":"MONDO:0957578","xrefs":{"Monarch":{"xref_id":"0957578"}}}


id: PBO:0086820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YMR085W and adjacent ORF YMR084W are merged in related strains, and together are paralogous to glutamine-fructose-6-phosphate amidotransferase GFA1","termid":"PBO:0086820"}


id: PBO:0061298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPC intracellular cholesterol transporter 1","termid":"PBO:0061298"}


id: GO:0046107
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of uracil, 2,4-dioxopyrimidine, one of the pyrimidine bases occurring in RNA, but not in DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"uracil metabolic process","termid":"GO:0019860"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"uracil biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil anabolism","type":"exact"},{"name":"uracil biosynthesis","type":"exact"},{"name":"uracil formation","type":"exact"},{"name":"uracil synthesis","type":"exact"}],"termid":"GO:0046107","terms_by_termid":{"GO:0006223":null}}


id: PBO:0077136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor protein","termid":"PBO:0077136"}


id: MONDO:0020388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"double outlet right ventricle","termid":"MONDO:0018089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"double outlet right ventricle with non-committed subpulmonary ventricular septal defect","secondary_identifiers":["GARD:19617","Orphanet:99046","UMLS:C1956410","icd11.foundation:2032277111","MEDGEN:365501"],"synonyms":[{"name":"DORV with non-committed subpulmonary VSD","type":"exact"}],"termid":"MONDO:0020388","xrefs":{"Monarch":{"xref_id":"0020388"}}}


id: FYPO:0002287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to heat is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to heat","synonyms":[{"name":"decreased RNA accumulation during cellular response to heat","type":"related"},{"name":"decreased RNA level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to heat shock","type":"narrow"},{"name":"decreased transcript level during cellular response to heat","type":"exact"},{"name":"reduced RNA level during cellular response to heat","type":"exact"}],"termid":"FYPO:0002287"}


id: GO:0035965
data:
  {"annotated_genes":["SJAG_04323"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70787],"is_not":false,"summary":null,"term":"GO:0035965"}]},"cv_name":"biological_process","definition":"Remodeling the acyl chains of premature (de novo synthesized) cardiolipin (1,3-bis(3-phosphatidyl)glycerol), through sequential deacylation and re-acylation reactions, to generate mature cardiolipin containing high-levels of unsaturated fatty acids.","definition_xrefs":["GOC:bf","GOC:rb","PMID:19244244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cardiolipin acyl-chain remodeling","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1482798"],"synonyms":[{"name":"cardiolipin acyl-chain remodelling","type":"exact"},{"name":"cardiolipin maturation","type":"broad"},{"name":"diphosphatidylglycerol remodeling","type":"related"}],"termid":"GO:0035965","terms_by_termid":{"GO:0035965":null}}


id: GO:0090212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of establishment of blood-brain barrier","termid":"GO:0090210"},{"relation_name":"negatively_regulates","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of blood-brain barrier","synonyms":[{"name":"negative regulation of establishment of BBB","type":"exact"}],"termid":"GO:0090212"}


id: MONDO:0022602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly small stature face anomalies","termid":"MONDO:0022602","xrefs":{"Monarch":{"xref_id":"0022602"}}}


id: MONDO:1012074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple exostoses, non-human animal","termid":"MONDO:1011944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple exostoses, horse","secondary_identifiers":["OMIA:000354-9796"],"termid":"MONDO:1012074","xrefs":{"Monarch":{"xref_id":"1012074"}}}


id: PBO:0070590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 56","termid":"PBO:0070590"}


id: MONDO:0005931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive multifocal leukoencephalopathy (obsolete MONDO:0005931)","termid":"MONDO:0005931","xrefs":{"Monarch":{"xref_id":"0005931"}}}


id: GO:0006388
data:
  {"annotated_genes":["SJAG_04907","SJAG_03328","SJAG_01260","SJAG_03913","SJAG_01791","SJAG_00956","SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73514,73617,77695],"is_not":false,"summary":null,"term":"GO:0006388"},{"annotations":[73658,71136,78766,72811],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000379"}]},"cv_name":"biological_process","definition":"Splicing of tRNA substrates via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons.","definition_xrefs":["PMID:9582290","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0000394"},{"relation_name":"is_a","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_00956":null,"SJAG_01260":null,"SJAG_01791":null,"SJAG_03328":null,"SJAG_03913":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA splicing, via endonucleolytic cleavage and ligation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"tRNA-Y splicing","type":"narrow"}],"termid":"GO:0006388","terms_by_termid":{"GO:0000379":null,"GO:0006388":null}}


id: PATO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process which is higher than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitivity of a process","termid":"PATO:0001457"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased sensitivity of a process","synonyms":[{"name":"high sensitivity of occurrent","type":"exact"},{"name":"increased sensitivity of occurrent","type":"exact"}],"termid":"PATO:0001551"}


id: PBO:0065298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 2","termid":"PBO:0065298"}


id: MONDO:0009138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysosteosclerosis is a skeletal dysplasia characterized by progressive osteosclerosis and platyspondyly.","definition_xrefs":["Orphanet:1782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysosteosclerosis","secondary_identifiers":["SCTID:254123002","icd11.foundation:1853176074","GARD:2012","OMIM:224300","ICD9:756.9","MEDGEN:98150","UMLS:C0432262","NANDO:2201365","MESH:C562973"],"synonyms":[{"name":"dysosteosclerosis","type":"exact"}],"termid":"MONDO:0009138","xrefs":{"Monarch":{"xref_id":"0009138"}}}


id: PBO:0053575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 596","termid":"PBO:0053575"}


id: MONDO:0020410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aorto-ventricular tunnel","termid":"MONDO:0018082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aorto-right ventricular tunnel","secondary_identifiers":["UMLS:C0345055","icd11.foundation:1166626076","Orphanet:99070","GARD:19632","MEDGEN:576720"],"termid":"MONDO:0020410","xrefs":{"Monarch":{"xref_id":"0020410"}}}


id: GO:0060110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The layer of cuticle most closely apposed to the hypodermal cells. The morphology of the basal layer varies with life stage. In adult C. elegans animals, the basal layers is comprised of three sublayers: two fibrous layers whose fibers run in clockwise and counter-clockwise directions meeting one another at a 60 degree angle, and an amorphous basal layer that lies underneath the fibrous layers and directly contacts the hypodermis. In C. elegans dauer and L1 larval stage animals, the basal layer is characterized by a striated pattern that appears to derive from interwoven laminae. An example of this component is found in Caenorhabditis elegans.","definition_xrefs":["GOC:dph","ISSN:15518507","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cuticular extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal layer of collagen and cuticulin-based cuticle extracellular matrix","synonyms":[{"name":"basal layer of collagen and cuticulin-based exoskeleton extracellular matrix","type":"related"}],"termid":"GO:0060110"}


id: PBO:0035971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_premeiotic_DNA_replication_during_azygotic_meiotic_cell_cycle","termid":"PBO:0035971"}


id: GO:0019610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","definition_xrefs":["PMID:6995433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"3-hydroxyphenylacetate metabolic process","termid":"GO:0019609"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"3-hydroxyphenylacetate catabolic process","secondary_identifiers":["MetaCyc:3-HYDROXYPHENYLACETATE-DEGRADATION-PWY"],"synonyms":[{"name":"3-hydroxyphenylacetate breakdown","type":"exact"},{"name":"3-hydroxyphenylacetate catabolism","type":"exact"},{"name":"3-hydroxyphenylacetate degradation","type":"exact"}],"termid":"GO:0019610"}


id: PBO:0065419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 6","termid":"PBO:0065419"}


id: PBO:0039137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense of IGF2R non-protein coding RNA","termid":"PBO:0039137"}


id: MONDO:0009148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital ectodermal dysplasia syndrome with a range of signs and symptoms including cleft lip or palate, mental retardation and various forms of ectodermal dysplasia. Additional symptoms may include fused eyelids, absent nails, delayed bone growth and dry skin. It is believed that this syndrome follows an autosomal dominant pattern of inheritance with incomplete penetrance, and caused by a mutation affecting the TP63 gene","definition_xrefs":["Wikipedia:Rosselli%E2%80%93Gulienetti_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ankyloblepharon-ectodermal defects-cleft lip/palate syndrome","termid":"MONDO:0007124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005497"],"is_obsolete":false,"name":"Rosselli-Gulienetti syndrome","secondary_identifiers":["MESH:C563117","UMLS:C0796139","OMIM:225000","icd11.foundation:1430451924","Orphanet:90339","MEDGEN:163221"],"synonyms":[{"name":"Rosselli-Gulienetti syndrome","type":"exact"}],"termid":"MONDO:0009148","xrefs":{"Monarch":{"xref_id":"0009148"}}}


id: MOD:00185
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-4'-bromophenylalanine.","definition_xrefs":["RESID:AA0176","PubMed:2076468","PubMed:9033387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated L-phenylalanine","termid":"MOD:00972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-4'-bromophenylalanine","synonyms":[{"name":"(2S)-2-amino-3-(4-bromophenyl)propanoic acid","type":"exact"},{"name":"4'BrPhe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-4'-bromophenylalanine","type":"exact"},{"name":"bromination","type":"related"},{"name":"p-bromophenylalanine","type":"exact"},{"name":"para-bromophenylalanine","type":"exact"}],"termid":"MOD:00185"}


id: PBO:0064045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 79","termid":"PBO:0064045"}


id: FYPO:0003536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal in a population in stationary phase. The septation index is the proportion of the population undergoing septation at any given time.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased septation index","termid":"FYPO:0000650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased septation index in stationary phase","synonyms":[{"name":"increased septation in stationary phase","type":"related"},{"name":"increased septation index during stationary phase","type":"exact"},{"name":"septated in stationary phase","type":"related"}],"termid":"FYPO:0003536"}


id: GO:0072736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tert-butyl hydroperoxide (t-BOOH) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkyl hydroperoxide","termid":"GO:0071448"},{"relation_name":"is_a","term_name":"response to tert-butyl hydroperoxide","termid":"GO:0072735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tert-butyl hydroperoxide","synonyms":[{"name":"cellular response to 2-methyl-prop-2-yl-hydroperoxide","type":"exact"},{"name":"cellular response to t-BOOH","type":"exact"}],"termid":"GO:0072736"}


id: MONDO:1011763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal acrodermatitis, non-human animal","secondary_identifiers":["OMIA:002146"],"termid":"MONDO:1011763","xrefs":{"Monarch":{"xref_id":"1011763"}}}


id: PBO:0069343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 603, pseudogene","termid":"PBO:0069343"}


id: PBO:0043294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLEC12A antisense RNA 1","termid":"PBO:0043294"}


id: GO:0052815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain fatty acyl-CoA + H2O = a medium-chain fatty acid + CoA + H+. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:68184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"medium-chain fatty acyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:3.1.2.19-RXN"],"synonyms":[{"name":"medium-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"medium-chain acyl-thioester hydrolase activity","type":"related"},{"name":"medium-chain hydrolase activity","type":"related"},{"name":"medium-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052815"}


id: PBO:0077826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member E","termid":"PBO:0077826"}


id: PBO:0005716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase Fmn1","termid":"PBO:0005716"}


id: GO:0042991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor import into nucleus (obsolete GO:0042991)","synonyms":[{"name":"transcription factor import into cell nucleus","type":"exact"},{"name":"transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"transcription factor-nucleus import","type":"exact"}],"termid":"GO:0042991"}


id: MONDO:0024617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"xanthogranuloma","secondary_identifiers":["NCIT:C27302","MEDGEN:1717859","UMLS:C5234857","SCTID:189099001"],"synonyms":[{"name":"xanthogranuloma","type":"exact"}],"termid":"MONDO:0024617","xrefs":{"Monarch":{"xref_id":"0024617"}}}


id: PBO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease (predicted)","termid":"PBO:0002233"}


id: MONDO:0003219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the esophagogastric junction.","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastroesophageal junction adenocarcinoma","secondary_identifiers":["MEDGEN:231030","NCIT:C9296","ONCOTREE:GEJ","UMLS:C1332166","DOID:4944","ONCOTREE:EGC"],"synonyms":[{"name":"adenocarcinoma - GEJ","type":"exact"},{"name":"adenocarcinoma of cardioesophageal junction","type":"exact"},{"name":"adenocarcinoma of gastroesophageal junction","type":"exact"},{"name":"adenocarcinoma of the EG junction","type":"exact"},{"name":"adenocarcinoma of the GE junction","type":"exact"},{"name":"adenocarcinoma of the cardioesophageal junction","type":"exact"},{"name":"adenocarcinoma of the esophagogastric junction","type":"exact"},{"name":"adenocarcinoma of the gastroesophageal junction","type":"exact"},{"name":"esophagogastric adenocarcinoma","type":"related"},{"name":"esophagogastric junction adenocarcinoma","type":"exact"},{"name":"gastroesophageal junction adenocarcinoma","type":"exact"}],"termid":"MONDO:0003219","xrefs":{"Monarch":{"xref_id":"0003219"}}}


id: PBO:0044096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A4","termid":"PBO:0044096"}


id: PBO:0083173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF RSC30/YHR056C","termid":"PBO:0083173"}


id: GO:0060973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the progression of the heart over time, from its initial formation, to the mature organ.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart development","termid":"GO:0060973"}


id: FYPO:0000530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the mitotic cell cycle arrest that normally occurs in response to pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal response to pheromone","termid":"FYPO:0000302"},{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"abnormal pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: abnormal","type":"related"}],"termid":"FYPO:0000530"}


id: FYPO:0005745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype in which the export of protein from the nucleus is abnormal. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"},{"relation_name":"is_a","term_name":"abnormal protein transport","termid":"FYPO:0005744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein export from nucleus","termid":"FYPO:0005745"}


id: GO:0160193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of L-lactate dehydrogenase.","definition_xrefs":["PMID:33406399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004857","GO:0098772","GO:0003674","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"L-lactate dehydrogenase inhibitor activity","termid":"GO:0160193"}


id: MONDO:0003835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the cardia of stomach.","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cardia carcinoma","termid":"MONDO:0003834"},{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric cardia adenocarcinoma","secondary_identifiers":["MEDGEN:232543","NCIT:C5247","DOID:6271","UMLS:C1333762"],"synonyms":[{"name":"adenocarcinoma of cardia of stomach","type":"exact"},{"name":"adenocarcinoma of gastric cardia","type":"related"},{"name":"adenocarcinoma of the cardia of the stomach","type":"exact"},{"name":"adenocarcinoma of the gastric cardia","type":"exact"},{"name":"cardia of stomach adenocarcinoma","type":"exact"}],"termid":"MONDO:0003835","xrefs":{"Monarch":{"xref_id":"0003835"}}}


id: MONDO:0001263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An retinitis caused by infection with Histoplasma capsulatum.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Histoplasma capsulatum infectious disease","termid":"MONDO:0002099"},{"relation_name":"is_a","term_name":"retinitis","termid":"MONDO:0002708"},{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"},{"relation_name":"is_a","term_name":"fungal infection of eye","termid":"MONDO:0020944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"histoplasmosis retinitis","secondary_identifiers":["DOID:11316","ICD9:115.92","MEDGEN:509240","SCTID:187058000","UMLS:C0153278"],"synonyms":[{"name":"Histoplasma capsulatum caused retinitis","type":"exact"},{"name":"Histoplasma capsulatum retinitis","type":"exact"},{"name":"histoplasmosis with retinitis","type":"exact"}],"termid":"MONDO:0001263","xrefs":{"Monarch":{"xref_id":"0001263"}}}


id: PBO:0002970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, CCR4-NOT complex subunit Rcd1","termid":"PBO:0002970"}


id: PBO:0113750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CwfJ family protein, splicing factor Mug161","termid":"PBO:0113750"}


id: RO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between c and p if and only if c is capable of some activity a, and a positively regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_regulating","termid":"RO:0002596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_positively_regulating","termid":"RO:0002598"}


id: PBO:0062652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 2","termid":"PBO:0062652"}


id: PBO:0043482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 4","termid":"PBO:0043482"}


id: GO:0044161
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle formed of membrane or protein, found in the cytoplasm of a host cell.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytoplasmic vesicle","termid":"GO:0044161"}


id: GO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) -> ADP + phosphate + Na+(out), by a rotational mechanism.","definition_xrefs":["PMID:30791207","RHEA:58157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sodium-transporting ATPase activity, rotational mechanism","secondary_identifiers":["EC:7.2.2.1"],"synonyms":[{"name":"ATP phosphohydrolase (Na+-transporting) activity","type":"related"},{"name":"ATP synthase, sodium ion specific activity","type":"related"},{"name":"Na(+)-translocating ATPase activity","type":"broad"},{"name":"Na(+)-transporting two-sector ATPase activity","type":"related"},{"name":"Na+-translocating ATPase activity","type":"related"},{"name":"Na+-translocating F1Fo-ATPase","type":"narrow"},{"name":"Na+-transporting two-sector ATPase","type":"narrow"},{"name":"sodium transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"sodium-translocating F-type ATPase activity","type":"narrow"},{"name":"sodium-translocating V-type ATPase activity","type":"narrow"},{"name":"sodium-transporting two-sector ATPase activity","type":"narrow"},{"name":"vacuolar-type Na+-ATPase","type":"narrow"},{"name":"vacuolar-type Na+-translocating ATPase","type":"narrow"}],"termid":"GO:0046962"}


id: GO:0010815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the peptide bradykinin.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bradykinin catabolic process","termid":"GO:0010815"}


id: MONDO:0004095
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A group of heterogeneous lymphoid tumors generally expressing one or more B-cell antigens or representing malignant transformations of B-lymphocytes.","definition_xrefs":["MESH:D016393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:86953","DOID:707","GARD:5877","UMLS:C0079731","NCIT:C27907"],"synonyms":[{"name":"B-cell lymphocytic neoplasm","type":"exact"},{"name":"B-cell lymphoma","type":"related"},{"name":"B-cell neoplasm","type":"exact"},{"name":"lymphoma, B-cell","type":"related"}],"termid":"MONDO:0004095","terms_by_termid":{"MONDO:0009693":null},"xrefs":{"Monarch":{"xref_id":"0004095"}}}


id: MONDO:0018996
data:
  {"annotated_genes":["SJAG_02242","SJAG_03923"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86386,86387],"is_not":false,"summary":null,"term":"MONDO:0018996"}]},"cv_name":"mondo","definition":"A rare autosomal recessive cerebellar ataxia (ARCA), characterized by progressive cerebellar ataxia associated with frequent oculomotor apraxia, severe neuropathy and an elevated serum alpha-fetoprotein (AFP) level.","definition_xrefs":["Orphanet:64753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy","termid":"MONDO:0020771"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0005244","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1853761","DOID:0050755","NCIT:C165500","OMIM:606002","MESH:C537308","GARD:12860","MEDGEN:340052","SCTID:725408001"],"synonyms":[{"name":"AOA2","type":"exact"},{"name":"SCAN 2","type":"exact"},{"name":"SCAN2","type":"exact"},{"name":"SCAR1","type":"related"},{"name":"ataxia with oculomotor apraxia type 2","type":"exact"},{"name":"ataxia-ocular apraxia 2","type":"exact"},{"name":"ataxia-oculomotor apraxia 2","type":"exact"},{"name":"ataxia-oculomotor apraxia type 2","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia-1","type":"related"},{"name":"spinocerebellar ataxia with axonal neuropathy type 2","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 1","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive type 1","type":"exact"}],"termid":"MONDO:0018996","terms_by_termid":{"MONDO:0018996":null},"xrefs":{"Monarch":{"xref_id":"0018996"}}}


id: MOD:01899
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-arginine residue and an L-cysteine residue to form arginine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:21568297","PubMed:21950656","RESID:AA0570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-arginine residue","termid":"MOD:02041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-arginine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-4-([diaminomethylidene]amino)butyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Arg-Cys)","type":"exact"},{"name":"L-arginine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01899"}


id: MONDO:0001349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dental caries","termid":"MONDO:0005276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontoclasia","secondary_identifiers":["DOID:11736","ICD9:521.05","MEDGEN:574111","SCTID:196305005","UMLS:C0341004","icd11.foundation:43527109"],"termid":"MONDO:0001349","xrefs":{"Monarch":{"xref_id":"0001349"}}}


id: GO:0102914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-methyl-3-aminomethylindole + S-adenosyl-L-methionine = H+ + gramine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete N-methyl-3-aminomethylindole N-methyltransferase activity (obsolete GO:0102914)","termid":"GO:0102914"}


id: PBO:0070969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 7","termid":"PBO:0070969"}


id: PBO:0058773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7107","termid":"PBO:0058773"}


id: GO:0000350
data:
  {"annotated_genes":["SJAG_02455","SJAG_01152","SJAG_01214","SJAG_01200"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72898,77110,104610,109298],"is_not":false,"summary":null,"term":"GO:0000350"}]},"cv_name":"biological_process","definition":"Conformational rearrangement of the spliceosomal complex containing the RNA products from the 1st step of splicing to form the catalytic site for the second step of splicing.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal conformational changes to generate catalytic conformation","termid":"GO:0000393"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01152":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_02455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0010467","GO:0016071","GO:0065003"],"is_obsolete":false,"name":"generation of catalytic spliceosome for second transesterification step","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000358","GO:0000359"],"synonyms":[{"name":"catalytic spliceosome assembly for second transesterification step","type":"related"},{"name":"formation of catalytic U12-type spliceosome for second transesterification step","type":"narrow"},{"name":"formation of catalytic U2-type spliceosome for second transesterification step","type":"narrow"},{"name":"formation of catalytic spliceosome for second transesterification step","type":"exact"},{"name":"formation of spliceosomal A2-2 complex","type":"narrow"},{"name":"formation of spliceosomal C1 complex","type":"narrow"},{"name":"lariat formation, 5'-splice site cleavage","type":"related"},{"name":"spliceosomal A2-3 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A2-3 complex formation","type":"narrow"},{"name":"spliceosomal C2 complex biosynthesis","type":"narrow"},{"name":"spliceosomal C2 complex formation","type":"narrow"}],"termid":"GO:0000350","terms_by_termid":{"GO:0000350":null}}


id: PBO:0040264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 101","termid":"PBO:0040264"}


id: PBO:0064241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C zeta 1","termid":"PBO:0064241"}


id: PBO:0048366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAPDH pseudogene 77","termid":"PBO:0048366"}


id: PBO:0080162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge X-linked 3B","termid":"PBO:0080162"}


id: GO:0120508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the reaction of GTP and mannose-1-phosphate to form GDP-mannose. The complex is a homodimer in most bacteria and a heterodimer in most eukaryotes. In humans, it is composed of a catalytic beta subunit (GMPPB) and a regulatory alpha subunit (GMPPA).","definition_xrefs":["GOC:sjm","PMID:33986552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GDP-mannose pyrophosphorylase complex","synonyms":[{"name":"GMPPA-GMPPB complex","type":"exact"}],"termid":"GO:0120508"}


id: GO:1990703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi medial membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:bhm","PMID:24119662","PMID:16038056"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi medial cisterna membrane (obsolete GO:1990703)","synonyms":[{"name":"integral component of medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990703"}


id: MOD:01427
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00819. Remap to MOD:00819.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01427 2-aminobutanoic acid (Abu) (obsolete MOD:01427)","synonyms":[{"name":"Abu","type":"exact"}],"termid":"MOD:01427"}


id: PBO:0055564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3000","termid":"PBO:0055564"}


id: PR:Q9USV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USV3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.04c","synonyms":[{"name":"Spom972h-cwf7","type":"exact"},{"name":"complexed with cdc5 protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"splicing factor 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV3"}


id: PBO:0088847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF2/EF3 lysine methyltransferase Efm2/Rgg1","termid":"PBO:0088847"}


id: MONDO:1011650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentalogy of Fallot, non-human animal","secondary_identifiers":["OMIA:001857"],"termid":"MONDO:1011650","xrefs":{"Monarch":{"xref_id":"1011650"}}}


id: GO:0035579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a specific granule, a granule with a membranous, tubular internal structure, found primarily in mature neutrophil cells. Most are released into the extracellular fluid. Specific granules contain lactoferrin, lysozyme, vitamin B12 binding protein and elastase.","definition_xrefs":["GOC:bf","PMID:7334549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"specific granule","termid":"GO:0042581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"specific granule membrane","synonyms":[{"name":"secondary granule membrane","type":"exact"}],"termid":"GO:0035579"}


id: FYPO:0003260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of RNA primary transcripts at sites that are not normally frequently used is decreased.","definition_xrefs":["PomBase:mah","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA splicing","termid":"FYPO:0003040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA splicing at cryptic splice sites","synonyms":[{"name":"decreased RNA splicing at cryptic splice sites during mitotic cell cycle","type":"related"},{"name":"decreased RNA splicing at cryptic splice sites during vegetative growth","type":"exact"},{"name":"decreased RNA splicing of cryptic introns","type":"exact"},{"name":"reduced RNA splicing at cryptic splice sites","type":"exact"}],"termid":"FYPO:0003260"}


id: PBO:0091550
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SBA1","termid":"PBO:0091550"}


id: SO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small nuclear RNA (snRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA_encoding","synonyms":[{"name":"snRNA encoding","type":"exact"}],"termid":"SO:0000623"}


id: MONDO:0017792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"7p22.1 microduplication syndrome is a rare chromosomal anomaly syndrome, resulting from a partial interstitial microduplication of the short arm of chromosome 7, characterized by intellectual disability, psychomotor and speech delays, craniofacial dysmorphism (including macrocephaly, frontal bossing, hypertelorism, abnormally slanted palpebral fissures, anteverted nares, low-set ears, microretrognathia) and cryptorchidia. Cardiac (e.g., patent foramen ovale and atrial septal defect), as well as renal, skeletal and ocular abnormalities may also be associated.","definition_xrefs":["Orphanet:314034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 7","termid":"MONDO:0016944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"7p22.1 microduplication syndrome","secondary_identifiers":["MEDGEN:1641886","SCTID:764703002","UMLS:C4707093","GARD:21367"],"synonyms":[{"name":"dup(7)(p22.1)","type":"exact"},{"name":"trisomy 7p22.1","type":"exact"}],"termid":"MONDO:0017792","xrefs":{"Monarch":{"xref_id":"0017792"}}}


id: GO:0030660
data:
  {"annotated_genes":["SJAG_00192","SJAG_01508","SJAG_04609","SJAG_04569","SJAG_04002","SJAG_01025","SJAG_02234","SJAG_00379","SJAG_04070","SJAG_02482","SJAG_04391","SJAG_04565","SJAG_01809","SJAG_04474","SJAG_02282","SJAG_02160","SJAG_04517"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112528,112740,62072,77567],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58626,65332],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[92993,70667,77817,79659,78152,98207,106878,64101,73332],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[95806,97516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030663"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle associated with the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"Golgi-associated vesicle","termid":"GO:0005798"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00379":null,"SJAG_01025":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"Golgi-associated vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle membrane","type":"related"}],"termid":"GO:0030660","terms_by_termid":{"GO:0030121":null,"GO:0030126":null,"GO:0030130":null,"GO:0030663":null}}


id: PBO:0004486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16 small nucleolar RNA","termid":"PBO:0004486"}


id: PBO:0040242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 2B","termid":"PBO:0040242"}


id: PBO:0041825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0041825"}


id: PBO:0043167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis associated kinase 1","termid":"PBO:0043167"}


id: PBO:0073764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 3 member 2","termid":"PBO:0073764"}


id: PBO:0042654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 3","termid":"PBO:0042654"}


id: PBO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CRE element","termid":"PBO:0001037"}


id: GO:0002295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper cell, a CD4-positive, alpha-beta T cell specialized to promote various immunological processes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell lineage commitment","termid":"GO:0043373"},{"relation_name":"part_of","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper cell lineage commitment","synonyms":[{"name":"T-helper cell fate commitment","type":"exact"},{"name":"Th0 lineage commitment","type":"related"},{"name":"Thp lineage commitment","type":"related"}],"termid":"GO:0002295"}


id: MONDO:0009803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital osteogenesis imperfecta-microcephaly-cataracts syndrome is characterized by multiple fractures in the prenatal period, microcephaly and bilateral cataracts. It has been described in three infants all of whom died in utero or a few hours after birth. The mode of inheritance appears to be autosomal recessive.","definition_xrefs":["Orphanet:2772"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital osteogenesis imperfecta-microcephaly-cataracts syndrome","secondary_identifiers":["MEDGEN:337988","UMLS:C1850184","GARD:4139","OMIM:259410","ICD10CM:Q78.0","MESH:C537558"],"synonyms":[{"name":"osteogenesis imperfecta congenita, microcephaly, and cataracts","type":"related"}],"termid":"MONDO:0009803","xrefs":{"Monarch":{"xref_id":"0009803"}}}


id: PBO:0066906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 207","termid":"PBO:0066906"}


id: FYPO:0003046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the centromere than normal, such that it extends beyond the IRC3L boundary element.","definition_xrefs":["PMID:24013502","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of centromeric heterochromatin assembly","termid":"FYPO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRC3L","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRC3L during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRC3L during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRC3L","type":"exact"}],"termid":"FYPO:0003046"}


id: MONDO:1011816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoproliferative disease, non-human animal","secondary_identifiers":["OMIA:001409"],"termid":"MONDO:1011816","xrefs":{"Monarch":{"xref_id":"1011816"}}}


id: MONDO:0100027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete febrile seizures plus, genetic epilepsy with febrile seizures plus (obsolete MONDO:0100027)","termid":"MONDO:0100027","xrefs":{"Monarch":{"xref_id":"0100027"}}}


id: FYPO:0001228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in vegetative growth phase of the life cycle, in which the amount of protein measured in the cell nucleus is higher than normal during a cellular response to hydrogen peroxide. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear protein level during vegetative growth","termid":"FYPO:0000255"},{"relation_name":"is_a","term_name":"increased protein level during cellular response to hydrogen peroxide","termid":"FYPO:0001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0002403","FYPO:0001320"],"is_obsolete":false,"name":"increased nuclear protein level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased nuclear protein level during cellular response to H2O2","type":"exact"},{"name":"increased nuclear protein level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased nuclear protein level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased protein level in nucleus during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear accumulation of protein during cellular response to hydrogen peroxide","type":"exact"},{"name":"nuclear protein accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear protein accumulation during cellular response to hydrogen peroxide during vegetative growth","type":"related"},{"name":"nuclear protein accumulation in response to hydrogen peroxide","type":"related"}],"termid":"FYPO:0001228"}


id: MONDO:1010948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-hodgkin lymphoma that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine lymphoma","termid":"MONDO:0700145"},{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-hodgkin lymphoma, dog","secondary_identifiers":["OMIA:001708-9615"],"termid":"MONDO:1010948","xrefs":{"Monarch":{"xref_id":"1010948"}}}


id: GO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"negatively_regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode larval development","termid":"GO:0061064"}


id: PBO:0049050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 45","termid":"PBO:0049050"}


id: PBO:0059283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L40 pseudogene 1","termid":"PBO:0059283"}


id: PBO:0069831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1117, pseudogene","termid":"PBO:0069831"}


id: MONDO:0004838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"orthostatic proteinuria","secondary_identifiers":["UMLS:C0232867","icd11.foundation:2144070055","MEDGEN:534880","ICD9:593.6","DOID:9617"],"synonyms":[{"name":"postural albuminuria","type":"exact"}],"termid":"MONDO:0004838","xrefs":{"Monarch":{"xref_id":"0004838"}}}


id: MONDO:0006375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the fetal blood vessels in the placental villi.","definition_xrefs":["NCIT:C4868"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intra-abdominal hemangioma","termid":"MONDO:0002337"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of placenta","termid":"MONDO:0021498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placental hemangioma","secondary_identifiers":["MEDGEN:195606","SCTID:237268002","ICD9:219.8","EFO:1000480","DOID:277","UMLS:C0677608"],"synonyms":[{"name":"Chorangioma","type":"exact"},{"name":"Chorangioma of the placenta","type":"related"},{"name":"Chorangioma placentae","type":"related"},{"name":"angioma of placenta","type":"related"},{"name":"angioma of the placenta","type":"related"},{"name":"chorioangioma","type":"exact"},{"name":"hemangioma of placenta","type":"exact"},{"name":"hemangioma of the placenta","type":"related"},{"name":"placenta hemangioma","type":"exact"},{"name":"placental angioma","type":"related"},{"name":"placental hemangioma","type":"exact"}],"termid":"MONDO:0006375","xrefs":{"Monarch":{"xref_id":"0006375"}}}


id: MONDO:1011818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasive transitional cell carcinoma, non-human animal","secondary_identifiers":["OMIA:001512"],"termid":"MONDO:1011818","xrefs":{"Monarch":{"xref_id":"1011818"}}}


id: PBO:0087256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in sphingolipid-mediated signaling pathway that controls endocytosis; activates Ypk1p and Ykr2p, components of signaling cascade required for maintenance of cell wall integrity; contains a PH-like domain; redundant with Pkh1p; PKH2 has a paralog, PKH1, that arose from the whole genome duplication","termid":"PBO:0087256"}


id: PBO:0044499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystin 1","termid":"PBO:0044499"}


id: FYPO:0001688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing brefeldin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on brefeldin A","synonyms":[{"name":"normal cell population growth in presence of brefeldin A","type":"exact"},{"name":"normal cell population growth on BFA","type":"exact"},{"name":"normal cell population growth on brefeldin A","type":"exact"},{"name":"normal cellular response to brefeldin A","type":"related"},{"name":"normal vegetative cell population growth on brefeldin A","type":"exact"}],"termid":"FYPO:0001688"}


id: MONDO:0958354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genetic central precocious puberty in female","secondary_identifiers":["UMLS:C5816765","MEDGEN:1853156","Orphanet:650077"],"termid":"MONDO:0958354","xrefs":{"Monarch":{"xref_id":"0958354"}}}


id: MOD:01259
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9448752","Unimod:314#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylmaleimide derivatized residue","termid":"MOD:00625"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide - site K","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:01259"}


id: PR:000027569
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3 that is a translation product of the Schizosaccharomyces pombe 972h- hht1 gene or a 1:1 ortholog thereof in fungi.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.1","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"hht1","type":"exact"}],"termid":"PR:000027569"}


id: MONDO:0800340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seasonal affective disorder, susceptibility to","synonyms":[{"name":"SAD, susceptibility to","type":"exact"}],"termid":"MONDO:0800340","xrefs":{"Monarch":{"xref_id":"0800340"}}}


id: MONDO:0009781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Onychotrichodysplasia and neutropenia","secondary_identifiers":["OMIM:258360","GARD:10161","Orphanet:2739","UMLS:C1850316","MEDGEN:340512","MESH:C537752"],"synonyms":[{"name":"Onychotrichodysplasia and neutropenia","type":"exact"},{"name":"onycho-tricho-dysplasia-neutropenia syndrome","type":"exact"}],"termid":"MONDO:0009781","xrefs":{"Monarch":{"xref_id":"0009781"}}}


id: GO:0062184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + reduced [NADPH--hemoprotein reductase] + testosterone = 16beta,17beta-dihydroxyandrost-4-en-3-one + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:21289075","RHEA:46304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"testosterone 16-beta-hydroxylase activity","termid":"GO:0062184"}


id: PBO:0040902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1P4-AGAP5 readthrough","termid":"PBO:0040902"}


id: GO:0036019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An transient hybrid organelle formed by fusion of a late endosome with a lysosome, and in which active degradation takes place.","definition_xrefs":["GOC:pde","PMID:21878991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"},{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005773","GO:0005768"],"is_obsolete":false,"name":"endolysosome","termid":"GO:0036019"}


id: PATO:0000789
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000789 respiratory function value (obsolete PATO:0000789)","termid":"PATO:0000789"}


id: FYPO:0008074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortical nodes is increased during mitotic interphase.","definition_xrefs":["PMID:10930468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to medial cortical node","termid":"FYPO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to medial cortical node during interphase","termid":"FYPO:0008074"}


id: PBO:0050879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 2","termid":"PBO:0050879"}


id: PBO:0017808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transmembrane transporter (predicted)","termid":"PBO:0017808"}


id: GO:1990070
data:
  {"annotated_genes":["SJAG_04837","SJAG_01415","SJAG_04021","SJAG_02655","SJAG_04618","SJAG_02525","SJAG_03467"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74863,88421,89104,97061,98862,102278,109571],"is_not":false,"summary":null,"term":"GO:1990070"}]},"cv_name":"cellular_component","definition":"A complex that tethers COPII vesicles at ER-Golgi intermediate compartment. Its role in this part of the vesicular transport may start at the ER exit sites. Binds to a component of the COPII coat. In yeast it includes the following subunits: Bet3 (as homodimer), Bet5, Trs20, Trs23, Trs31, Trs33 which are regarded as the core subunits of all TRAPP complexes in yeast.","definition_xrefs":["PMID:20375281","GOC:bhm","PMID:22669257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRAPP complex","termid":"GO:0030008"},{"relation_name":"part_of","term_name":"endoplasmic reticulum-Golgi intermediate compartment","termid":"GO:0005793"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_03467":null,"SJAG_04021":null,"SJAG_04618":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"TRAPPI protein complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TRAPP core complex","type":"exact"}],"termid":"GO:1990070","terms_by_termid":{"GO:1990070":null}}


id: MONDO:0800066
data:
  {"annotated_genes":["SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"}]},"cv_name":"mondo","definition":"Any skeletal dysplasia that is characterizedby polydactyly, syndactyly and triphalangism, where a digit has three phalanges instead of two.","definition_xrefs":["PMID:31633310","PMID:19125433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"syndactyly","termid":"MONDO:0021002"},{"relation_name":"is_a","term_name":"polydactyly","termid":"MONDO:0021003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01213":null},"genotype_count":0,"is_obsolete":false,"name":"polydactyly-syndactyly-triphalangism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800066","terms_by_termid":{"MONDO:0010408":null},"xrefs":{"Monarch":{"xref_id":"0800066"}}}


id: GO:0038181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a bile acid and transmitting the signal to initiate a change in cell activity. A bile acid is any member of a group of steroid carboxylic acids occurring in bile.","definition_xrefs":["GOC:bf","PMID:12718893","PMID:10334992"],"gene_count":0,"genotype_count":0,"name":"obsolete bile acid receptor activity (obsolete GO:0038181)","termid":"GO:0038181"}


id: GO:0043666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein.","definition_xrefs":["GOC:jp","PMID:11724821"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphoprotein phosphatase activity (obsolete GO:0043666)","synonyms":[{"name":"regulation of calcineurin activity","type":"narrow"},{"name":"regulation of protein phosphatase 3 activity","type":"related"},{"name":"regulation of protein phosphatase type 2 activity","type":"related"},{"name":"regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"regulation of protein phosphatase type 2B activity","type":"narrow"}],"termid":"GO:0043666"}


id: FYPO:0001410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfide (S2-, also called acid labile sulfide) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular sulfide level","synonyms":[{"name":"normal cellular acid labile sulfide level","type":"exact"},{"name":"normal cellular sulfide accumulation","type":"related"},{"name":"normal cellular sulfide ion level","type":"exact"},{"name":"normal cellular sulfide level during mitotic cell cycle","type":"related"},{"name":"normal cellular sulfide level during vegetative growth","type":"exact"},{"name":"normal cellular sulphide level","type":"exact"}],"termid":"FYPO:0001410"}


id: MONDO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon usually benign neoplasm that arises from the testis. It is characterized by the presence of cysts lined by transitional cells and solid nests of transitional cells in a spindle cell stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"},{"relation_name":"is_a","term_name":"Brenner tumor","termid":"MONDO:0024235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular Brenner tumor","secondary_identifiers":["UMLS:C1515281","MEDGEN:273631","NCIT:C39953","DOID:4739"],"synonyms":[{"name":"testes, rudimentary Brenner tumor","type":"exact"},{"name":"testes, rudimentary Brenner tumour","type":"exact"},{"name":"testis Brenner tumor","type":"exact"},{"name":"testis Brenner tumour","type":"exact"}],"termid":"MONDO:0003118","xrefs":{"Monarch":{"xref_id":"0003118"}}}


id: MONDO:0021168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign slow growing adipose tissue tumor, characterized by the presence of polygonal brown fat cells with multivacuolated and/or granular cytoplasm. The tumor is usually painless and is most often seen in young adults.","definition_xrefs":["NCIT:C3702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hibernoma","secondary_identifiers":["MEDGEN:61456","UMLS:C0205822","ICDO:8880/0","SCTID:404064001"],"synonyms":[{"name":"Brown fat neoplasm","type":"exact"},{"name":"Brown fat tumor","type":"exact"},{"name":"Brown fat tumour","type":"exact"},{"name":"fetal fat cell lipoma","type":"exact"},{"name":"foetal fat cell lipoma","type":"exact"},{"name":"hibernoma","type":"exact"},{"name":"hibernoma, benign","type":"exact"}],"termid":"MONDO:0021168","xrefs":{"Monarch":{"xref_id":"0021168"}}}


id: GO:1900808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumigaclavine C.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumigaclavine C catabolic process (obsolete GO:1900808)","synonyms":[{"name":"fumigaclavine C breakdown","type":"exact"},{"name":"fumigaclavine C catabolism","type":"exact"},{"name":"fumigaclavine C degradation","type":"exact"}],"termid":"GO:1900808"}


id: PBO:0041493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 43","termid":"PBO:0041493"}


id: PBO:0030160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_during_vegetative_growth","termid":"PBO:0030160"}


id: GO:0010131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose by the enzymatic action of either invertase or sucrose synthase.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using invertase or sucrose synthase (obsolete GO:0010131)","synonyms":[{"name":"sucrose breakdown, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolic process, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolism, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose degradation, using invertase or sucrose synthase","type":"exact"}],"termid":"GO:0010131"}


id: SO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL8 RNA leader sequence to the 5' end of an mRNA. SL8 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL8_acceptor_site","synonyms":[{"name":"SL8 acceptor site","type":"exact"}],"termid":"SO:0001753"}


id: PR:Q9P780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear protein localization protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03153","PRO:DNx","PANTHER:PTHR12710:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein localization protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.10c","secondary_identifiers":["UniProtKB:Q9P780"],"synonyms":[{"name":"Spom972h-NPLOC4","type":"exact"}],"termid":"PR:Q9P780"}


id: PBO:0083828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential t-SNARE that mediates fusion of vesicles with the late Golgi; forms a complex with Tlg2p and Vti1p; mediates fusion of endosome-derived vesicles with the late Golgi; binds the docking complex VFT (Vps fifty-three) through interaction with Vps51p","termid":"PBO:0083828"}


id: PBO:0034038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_plasma_membrane_part","termid":"PBO:0034038"}


id: PR:O13657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.12c gene.","definition_xrefs":["UniProtKB:O13657","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal ion transporter C27B12.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.12c","synonyms":[{"name":"Spom972h-SPBC27B12.12c","type":"exact"}],"termid":"PR:O13657"}


id: PR:Q9HFF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A MICOS complex subunit MIC10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02159","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit mic10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ691.03","secondary_identifiers":["UniProtKB:Q9HFF0"],"synonyms":[{"name":"Spom972h-MINOS1","type":"exact"},{"name":"mitochondrial inner membrane organizing system protein PJ691.03 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFF0"}


id: GO:0030507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0008092","GO:0003674"],"is_obsolete":false,"name":"spectrin binding","termid":"GO:0030507"}


id: PBO:0088401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus2","termid":"PBO:0088401"}


id: PBO:0053865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1140","termid":"PBO:0053865"}


id: GO:0008057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the eye.","definition_xrefs":["PMID:9303295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule organization","termid":"GO:0048753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment granule organization","secondary_identifiers":["GO:0008059","GO:0048751","GO:0045318"],"synonyms":[{"name":"eye pigment granule organisation","type":"exact"},{"name":"eye pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0008057"}


id: PBO:0063984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 18","termid":"PBO:0063984"}


id: PBO:0029496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromosome_disjunction_at_meiosis_I","termid":"PBO:0029496"}


id: GO:0061552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of ganglion are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"ganglion development","termid":"GO:0061548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion morphogenesis","synonyms":[{"name":"ganglia morphogenesis","type":"related"}],"termid":"GO:0061552"}


id: PBO:0087180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A12.2; contains two zinc binding domains, and the N terminal domain is responsible for anchoring to the RNA pol I complex; physically interacts with transcriptional activator Msn4p, to regulate transcription of AYR1, a gene involved in lipid metabolism","termid":"PBO:0087180"}


id: PR:O42868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase II subunit A C-terminal domain phosphatase SSU72 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01329","PANTHER:PTHR20383:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A C-terminal domain phosphatase ssu72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.04","secondary_identifiers":["UniProtKB:O42868"],"synonyms":[{"name":"CTD phosphatase ssu72 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SSU72","type":"exact"},{"name":"suppressor of SUA7 protein 2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42868"}


id: GO:0030228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a lipoprotein particle and delivering the lipoprotein particle into the cell via endocytosis. A lipoprotein particle, also known as a lipoprotein, is a clathrate complex consisting of a lipid enwrapped in a protein host without covalent binding in such a way that the complex has a hydrophilic outer surface consisting of all the protein and the polar ends of any phospholipids.","definition_xrefs":["GOC:bf","PMID:12827279","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"lipoprotein particle receptor activity","synonyms":[{"name":"lipoprotein receptor activity","type":"exact"},{"name":"plasma lipoprotein particle receptor activity","type":"narrow"}],"termid":"GO:0030228"}


id: PBO:0070991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 15","termid":"PBO:0070991"}


id: PBO:0071754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 1","termid":"PBO:0071754"}


id: _global:acts_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within","secondary_identifiers":["RO:0002264"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:acts_upstream_of_or_within"}


id: PBO:0079277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TELO2 interacting protein 1","termid":"PBO:0079277"}


id: PBO:0055828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 3","termid":"PBO:0055828"}


id: PBO:0070157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 71 pseudogene","termid":"PBO:0070157"}


id: GO:0035142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the dorsal fin are generated and organized. A dorsal fin is an unpaired medial fin on the dorsal aspect of fish that provides lateral stability while swimming. Generally fish have one or two dorsal fins.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"dorsal fin development","termid":"GO:0033337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal fin morphogenesis","termid":"GO:0035142"}


id: PBO:0059498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"msh homeobox 1","termid":"PBO:0059498"}


id: GO:0036243
data:
  {"annotated_genes":["SJAG_03293","SJAG_00674"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87205,88183],"is_not":false,"summary":null,"term":"GO:0036243"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate semialdehyde + NADP+ + H2O = succinate + NADPH + 2 H+.","definition_xrefs":["GOC:bf","RHEA:13213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-semialdehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0009013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.1.79","MetaCyc:SUCCSEMIALDDEHYDROG-RXN"],"synonyms":[{"name":"NADP-dependent succinate-semialdehyde dehydrogenase activity","type":"related"},{"name":"succinate semialdehyde:NADP+ oxidoreductase activity","type":"related"},{"name":"succinic semialdehyde dehydrogenase (NADP+) activity","type":"related"},{"name":"succinyl semialdehyde dehydrogenase (NADP+) activity","type":"related"}],"termid":"GO:0036243","terms_by_termid":{"GO:0036243":null}}


id: GO:0046130
data:
  {"annotated_genes":["SJAG_02580","SJAG_02959"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87347,87346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any purine ribonucleoside, a nucleoside in which purine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside catabolic process","termid":"GO:0006152"},{"relation_name":"is_a","term_name":"ribonucleoside catabolic process","termid":"GO:0042454"},{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02580":null,"SJAG_02959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside breakdown","type":"exact"},{"name":"purine ribonucleoside catabolism","type":"exact"},{"name":"purine ribonucleoside degradation","type":"exact"}],"termid":"GO:0046130","terms_by_termid":{"GO:0006154":null}}


id: GO:0140742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transcription of lncRNAs, non-coding RNAs over 200 nucleotides in length, from a DNA template.","definition_xrefs":["PMID:33767452","PMID:33913806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"lncRNA transcription","termid":"GO:0140742"}


id: PBO:0070424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 2","termid":"PBO:0070424"}


id: PBO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YDR208W","termid":"PBO:0002351"}


id: GO:0140073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A structural molecule ativity that mediates an organism's attachment to an environmental substrate via stable, non-selective binding by a protein to an external surface. Examples includes proteins used by insects to anchor pupae to surfaces.","definition_xrefs":["PMID:39370426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"bioadhesive activity","termid":"GO:0140073"}


id: PBO:0058995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLX interacting protein","termid":"PBO:0058995"}


id: PBO:0079378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 13","termid":"PBO:0079378"}


id: PBO:0074115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 1","termid":"PBO:0074115"}


id: MONDO:0020589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises within the myocardium or cardiac chambers. The reported cases have been teratomas and yolk sac tumors.","definition_xrefs":["NCIT:C147005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal germ cell tumor","termid":"MONDO:0018201"},{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac germ cell tumor","secondary_identifiers":["UMLS:C4687640","MEDGEN:1633290"],"synonyms":[{"name":"cardiac germ cell tumor","type":"exact"},{"name":"heart germ cell tumor","type":"exact"},{"name":"heart germ cell tumour","type":"exact"}],"termid":"MONDO:0020589","xrefs":{"Monarch":{"xref_id":"0020589"}}}


id: MONDO:0007429
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86399],"is_not":false,"summary":null,"term":"MONDO:0007429"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy plus syndrome","termid":"MONDO:0014720"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"optic atrophy with or without deafness, ophthalmoplegia, myopathy, ataxia, and neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15057","OMIM:125250","UMLS:C3276549","MEDGEN:478179"],"synonyms":[{"name":"dominant optic atrophy plus syndrome","type":"related"},{"name":"optic atrophy 1 and deafness","type":"related"},{"name":"optic atrophy plus syndrome","type":"exact"},{"name":"optic atrophy with or without deafness, ophthalmoplegia, myopathy, ataxia, and neuropathy","type":"exact"}],"termid":"MONDO:0007429","terms_by_termid":{"MONDO:0007429":null},"xrefs":{"Monarch":{"xref_id":"0007429"}}}


id: PBO:0075219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPN upstream open reading frame","termid":"PBO:0075219"}


id: PBO:0052123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 1","termid":"PBO:0052123"}


id: FYPO:0006970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of bisphosphoglyceric acid measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular bisphosphoglyceric acid level","synonyms":[{"name":"decreased cellular bisphosphoglyceric acid level during mitotic cell cycle","type":"related"},{"name":"decreased cellular bisphosphoglyceric acid level during vegetative growth","type":"exact"},{"name":"decreased cellular diphosphoglycerate level","type":"related"},{"name":"decreased level of bisphosphoglyceric acid in cell","type":"exact"},{"name":"reduced cellular bisphosphoglyceric acid level","type":"exact"}],"termid":"FYPO:0006970"}


id: MONDO:0800030
data:
  {"annotated_genes":["SJAG_00137"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84848],"is_not":false,"summary":null,"term":"MONDO:0800030"}]},"cv_name":"mondo","definition":"A rare genetic disease characterized by multiple intestinal atresia in association with combined immunodeficiency and inflammatory bowel disease. Clinical features include widespread atresia extending from the stomach to the rectum, homogenous calcifications in the abdominal cavity, hepatic cholestasis, cirrhosis, and chronic liver failure, hypoplastic thymus, and increased susceptibility to mainly bacteria and viruses. The immunological phenotype consists of profound generalized T-cell lymphopenia and milder natural killer cell and B-cell lymphopenia, as well as low serum levels of IgG, IgA, and IgM, with elevated serum IgE. The disease is mostly fatal in infancy or childhood.","definition_xrefs":["Orphanet:436252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"gastrointestinal defect and immunodeficiency syndrome","termid":"MONDO:0030831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00137":null},"genotype_count":0,"is_obsolete":false,"name":"gastrointestinal defects and immunodeficiency syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17731","OMIM:243150","UMLS:C5680044","MEDGEN:1806192"],"synonyms":[{"name":"CID-MIA/early-onset IBD","type":"exact"},{"name":"FIPA","type":"exact"},{"name":"MINAT","type":"exact"},{"name":"combined immunodeficiency-enteropathy spectrum","type":"exact"},{"name":"familial intestinal polyatresia syndrome","type":"exact"},{"name":"intestinal atresia, multiple","type":"broad"},{"name":"multiple intestinal atresia and/or inflammatory bowel disease with or without immunodeficiency","type":"exact"}],"termid":"MONDO:0800030","terms_by_termid":{"MONDO:0800030":null},"xrefs":{"Monarch":{"xref_id":"0800030"}}}


id: PBO:0065651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type D","termid":"PBO:0065651"}


id: GO:0035254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glutamate receptor.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glutamate receptor binding","termid":"GO:0035254"}


id: PBO:0048283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 17","termid":"PBO:0048283"}


id: PBO:0047719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 10, pseudogene","termid":"PBO:0047719"}


id: GO:0035277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a spiracle are generated and organized. Spiracles are the openings in the insect open tracheal system; externally they connect to the epidermis and internally they connect to the tracheal trunk.","definition_xrefs":["PMID:10491268","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spiracle morphogenesis, open tracheal system","synonyms":[{"name":"spiracle morphogenesis","type":"exact"}],"termid":"GO:0035277"}


id: GO:0008120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acylsphing-4-enine + UDP-alpha-D-glucose = a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + H+ + UDP.","definition_xrefs":["RHEA:12088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"ceramide glucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1638104","EC:2.4.1.80","MetaCyc:CERAMIDE-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose-ceramide glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-acylsphingosine D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:ceramide glucosyltransferase activity","type":"related"},{"name":"UDPglucose:N-acylsphingosine D-glucosyltransferase activity","type":"related"},{"name":"ceramide:UDP-glucose glucosyltransferase activity","type":"related"},{"name":"ceramide:UDPGlc glucosyltransferase activity","type":"related"},{"name":"glucosylceramide synthase activity","type":"related"},{"name":"uridine diphosphoglucose-ceramide glucosyltransferase activity","type":"related"}],"termid":"GO:0008120"}


id: PBO:0087554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP, nuclear RNase P and telomerase complexes; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA; binds to the RPR1 RNA subunit in RNase P","termid":"PBO:0087554"}


id: CHEBI:31823
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A mercury coordination entity made up of linear triatomic molecules in which a mercury atom is bonded to two chlorines","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury dichloride","termid":"CHEBI:31823"}


id: GO:0005979
data:
  {"annotated_genes":["SJAG_00963","SJAG_01376"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78661,76962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of glycogen metabolic process","termid":"GO:0070873"},{"relation_name":"regulates","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00963":null,"SJAG_01376":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of glycogen biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of glycogen anabolism","type":"exact"},{"name":"regulation of glycogen biosynthesis","type":"exact"},{"name":"regulation of glycogen formation","type":"exact"},{"name":"regulation of glycogen synthesis","type":"exact"}],"termid":"GO:0005979","terms_by_termid":{"GO:0045719":null}}


id: PBO:0077574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA element modulatory factor 1 pseudogene 1","termid":"PBO:0077574"}


id: MONDO:0003645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cavernous hemangioma arising from the face.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cavernous hemangioma","termid":"MONDO:0003155"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"cavernous hemangioma of face","secondary_identifiers":["NCIT:C7053","EFO:1000152","MONDO:0006125","MEDGEN:234097","UMLS:C1332863","DOID:5776","HP:0007486"],"synonyms":[{"name":"cavernous hemangioma of face","type":"exact"},{"name":"cavernous hemangioma of the Face","type":"exact"},{"name":"face cavernous hemangioma","type":"exact"}],"termid":"MONDO:0003645","xrefs":{"Monarch":{"xref_id":"0003645"}}}


id: GO:0031484
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XIV myosin heavy chain and associated light chains; myosin XIV heavy chains are the simplest known, containing a motor domain, no classic IQ motif and variable length tails.","definition_xrefs":["PMID:10722873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015629"],"is_obsolete":false,"name":"myosin XIV complex","termid":"GO:0031484"}


id: PBO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Meu32","termid":"PBO:0001077"}


id: GO:0034925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyrene + O2 + 2 H+ + 2 e- = pyrene-4,5-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrene 4,5-monooxygenase activity (obsolete GO:0034925)","termid":"GO:0034925"}


id: GO:0007282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any of the rounds of incomplete mitosis undergone by a cystoblast to form a cyst of interconnected cells.","definition_xrefs":["PMID:21452446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cystoblast division","synonyms":[{"name":"cystoblast cell division","type":"exact"}],"termid":"GO:0007282"}


id: GO:0046581
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intercellular canaliculus","termid":"GO:0046581"}


id: MONDO:0022759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 22 is a chromosome disorder in which an extra (third) copy of chromosome 22 is present in every cell of the body where there should normally only be two copies. This condition is commonly found in miscarriages, but only rarely in liveborn infants. Most affected individuals die shortly before or shortly after birth due to severe complications. Common features include an underdeveloped midface (midface hypoplasia)with flat/broad nasal bridge, malformed ears with pits or tags, cleft palate, hypertelorism (wide-spaced eyes), microcephaly and other cranial abnormalities, congenital heart disease, genital abnormalities, and intrauterine growth restriction (IUGR).","definition_xrefs":["GARD:0005335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 22 disorder","termid":"MONDO:0700026"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 22","secondary_identifiers":["SCTID:205655003","UMLS:C0265490","GARD:5335","MEDGEN:82711","MESH:C536799"],"synonyms":[{"name":"chromosome 22 trisomy","type":"related"}],"termid":"MONDO:0022759","xrefs":{"Monarch":{"xref_id":"0022759"}}}


id: PBO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific GPI anchored protein family","termid":"PBO:0000069"}


id: PBO:0028165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exon_skipping","termid":"PBO:0028165"}


id: MOD:00021
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-lysine.","definition_xrefs":["RESID:AA0012","ChEBI:29967","PubMed:3106962","PubMed:6692818","DeltaMass:0","PubMed:6120171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine residue","synonyms":[{"name":"(2S)-2,6-diaminohexanoic acid","type":"exact"},{"name":"2,6-bis(azanyl)hexanoic acid","type":"exact"},{"name":"6-amino-L-norleucine","type":"exact"},{"name":"ACT_SITE Schiff-base intermediate with substrate","type":"exact"},{"name":"L-lysine","type":"exact"},{"name":"Lys","type":"exact"},{"name":"alpha,epsilon-diaminocaproic acid","type":"exact"}],"termid":"MOD:00021"}


id: FYPO:0004996
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}],"single_locus_phenotype":[{"annotations":[118985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004718"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to a specific location on a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":2,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abnormal protein localization to chromosome","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"abnormal protein localisation to chromosome","type":"exact"}],"termid":"FYPO:0004996","terms_by_termid":{"FYPO:0001132":null,"FYPO:0004718":null,"FYPO_EXT:0000001":null}}


id: GO:0061360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the progression of the optic chiasm from its initial formation to the mature structure. The process begins when the pathfinding of the axons of the developing optic nerve cause some axons to cross at the midline of the brain and ends when the axons are mature.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"optic nerve development","termid":"GO:0021554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic chiasma development","synonyms":[{"name":"optic chiasm development","type":"exact"}],"termid":"GO:0061360"}


id: PBO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 9","termid":"PBO:0071980"}


id: GO:0070267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in swelling of the cell body, and that is morphologically characteristic of necrotic cell death.","definition_xrefs":["PMID:17873035","PMID:18846107"],"gene_count":0,"genotype_count":0,"name":"obsolete oncosis (obsolete GO:0070267)","termid":"GO:0070267"}


id: PBO:0002959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sulfhydryl oxidase (predicted)","termid":"PBO:0002959"}


id: PBO:0043196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 4","termid":"PBO:0043196"}


id: PBO:0002778
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cryptic Loci Regulator","termid":"PBO:0002778"}


id: MONDO:0006414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that arises from the skin. Representative examples include Kaposi sarcoma, angiosarcoma, lymphangiosarcoma, liposarcoma, and leiomyosarcoma.","definition_xrefs":["NCIT:C5585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant dermis tumor","termid":"MONDO:0003363"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin sarcoma","secondary_identifiers":["UMLS:C0856900","EFO:1000531","MEDGEN:208989","DOID:2687"],"synonyms":[{"name":"cutaneous sarcoma","type":"exact"},{"name":"sarcoma of skin","type":"exact"},{"name":"sarcoma of the skin","type":"exact"},{"name":"sarcoma of zone of skin","type":"exact"},{"name":"skin sarcoma","type":"exact"},{"name":"zone of skin sarcoma","type":"exact"}],"termid":"MONDO:0006414","xrefs":{"Monarch":{"xref_id":"0006414"}}}


id: PBO:0088882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H4-K20 methyltransferase Set9","termid":"PBO:0088882"}


id: PBO:0024809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_influences","termid":"PBO:0024809"}


id: MONDO:1011990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dysplasia and persistent primary vitreous, non-human animal","secondary_identifiers":["OMIA:001420"],"termid":"MONDO:1011990","xrefs":{"Monarch":{"xref_id":"1011990"}}}


id: PBO:0081538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 449","termid":"PBO:0081538"}


id: FYECO:0000124
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to late exponential phase.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to late exponential phase","termid":"FYECO:0000124"}


id: GO:0052869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoate + O2 + reduced [NADPH--hemoprotein reductase] = 20-hydroxy-(5Z,8Z,11Z,14Z)-eicosatetraenoate + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. (5Z,8Z,11Z,14Z)-icosatetraenoic acid is also known as arachidonic acid is also and 20-hydroxy-(5Z,8Z,11Z,14Z)-eicosatetraenoate as 20-HETE.","definition_xrefs":["RHEA:39755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"arachidonate omega-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07041","MetaCyc:RXN-19677"],"synonyms":[{"name":"arachidonic acid hydroxylase activity","type":"broad"},{"name":"arachidonic acid omega-hydroxylase activity","type":"exact"},{"name":"arachidonic acid:oxygen 1-oxidoreductase activity","type":"exact"}],"termid":"GO:0052869"}


id: PBO:0075508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 1","termid":"PBO:0075508"}


id: PBO:0017430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_substrate","termid":"PBO:0017430"}


id: GO:1903285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrogen peroxide catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","PMID:23507046","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of hydrogen peroxide metabolic process","termid":"GO:0010726"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide catabolic process","termid":"GO:2000295"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide catabolic process","termid":"GO:0042744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide catabolic process","synonyms":[{"name":"activation of H2O2 catabolic process","type":"narrow"},{"name":"activation of H2O2 scavenging","type":"related"},{"name":"activation of detoxification of H2O2","type":"related"},{"name":"activation of detoxification of hydrogen peroxide","type":"related"},{"name":"activation of hydrogen peroxide breakdown","type":"narrow"},{"name":"activation of hydrogen peroxide catabolic process","type":"narrow"},{"name":"activation of hydrogen peroxide catabolism","type":"narrow"},{"name":"activation of hydrogen peroxide degradation","type":"narrow"},{"name":"activation of hydrogen peroxide removal","type":"related"},{"name":"activation of hydrogen peroxide scavenging","type":"related"},{"name":"positive regulation of H2O2 catabolic process","type":"exact"},{"name":"positive regulation of H2O2 scavenging","type":"related"},{"name":"positive regulation of detoxification of H2O2","type":"related"},{"name":"positive regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"positive regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"positive regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"positive regulation of hydrogen peroxide degradation","type":"exact"},{"name":"positive regulation of hydrogen peroxide removal","type":"related"},{"name":"positive regulation of hydrogen peroxide scavenging","type":"related"},{"name":"up regulation of H2O2 catabolic process","type":"exact"},{"name":"up regulation of H2O2 scavenging","type":"related"},{"name":"up regulation of detoxification of H2O2","type":"related"},{"name":"up regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"up regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"up regulation of hydrogen peroxide catabolic process","type":"exact"},{"name":"up regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"up regulation of hydrogen peroxide degradation","type":"exact"},{"name":"up regulation of hydrogen peroxide removal","type":"related"},{"name":"up regulation of hydrogen peroxide scavenging","type":"related"},{"name":"up-regulation of H2O2 catabolic process","type":"exact"},{"name":"up-regulation of H2O2 scavenging","type":"related"},{"name":"up-regulation of detoxification of H2O2","type":"related"},{"name":"up-regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"up-regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"up-regulation of hydrogen peroxide catabolic process","type":"exact"},{"name":"up-regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"up-regulation of hydrogen peroxide degradation","type":"exact"},{"name":"up-regulation of hydrogen peroxide removal","type":"related"},{"name":"up-regulation of hydrogen peroxide scavenging","type":"related"},{"name":"upregulation of H2O2 catabolic process","type":"exact"},{"name":"upregulation of H2O2 scavenging","type":"related"},{"name":"upregulation of detoxification of H2O2","type":"related"},{"name":"upregulation of detoxification of hydrogen peroxide","type":"related"},{"name":"upregulation of hydrogen peroxide breakdown","type":"exact"},{"name":"upregulation of hydrogen peroxide catabolic process","type":"exact"},{"name":"upregulation of hydrogen peroxide catabolism","type":"exact"},{"name":"upregulation of hydrogen peroxide degradation","type":"exact"},{"name":"upregulation of hydrogen peroxide removal","type":"related"},{"name":"upregulation of hydrogen peroxide scavenging","type":"related"}],"termid":"GO:1903285"}


id: MONDO:0043137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"isolated microcephaly","secondary_identifiers":["MESH:C537542","UMLS:C2931527","MEDGEN:419828"],"synonyms":[{"name":"Nonsyndromal microcephaly","type":"related"},{"name":"microcephaly, non-syndromic","type":"related"},{"name":"nonsyndromic microcephaly","type":"related"}],"termid":"MONDO:0043137","xrefs":{"Monarch":{"xref_id":"0043137"}}}


id: PBO:0079670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V2 antisense RNA 1","termid":"PBO:0079670"}


id: PR:Q09798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PAB-dependent poly(A)-specific ribonuclease subunit PAN2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15728:SF0","OMA:SCHPO00288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAB-dependent poly(A)-specific ribonuclease subunit PAN2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.04","secondary_identifiers":["UniProtKB:Q09798"],"synonyms":[{"name":"PAB1P-dependent poly(A)-nuclease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAN deadenylation complex catalytic subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PAN2","type":"exact"}],"termid":"PR:Q09798"}


id: PBO:0053624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 667","termid":"PBO:0053624"}


id: GO:1905239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of canonical Wnt signaling pathway involved in osteoblast differentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","PMID:19342382","GOC:rph","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:1905239)","synonyms":[{"name":"regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:1905239"}


id: PBO:0048701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxalase domain containing 5","termid":"PBO:0048701"}


id: MONDO:1012866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypercholesterolemia that occurs in rabbits due to a mutation in the PCSK9 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"hyperlipidemia, non-human animal","termid":"MONDO:1012975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypercholesterolemia, PCSK9-related, rabbit","secondary_identifiers":["OMIA:002329-9986"],"synonyms":[{"name":"hypercholesterolaemia, PCSK9-related, rabbit","type":"exact"}],"termid":"MONDO:1012866","xrefs":{"Monarch":{"xref_id":"1012866"}}}


id: GO:0075267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cup-like structure containing chains of aeciospores is formed. This is characteristic of the rust fungus and typically, the first dikaryotic spores (aeciospores) are produced in the aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aecium development","termid":"GO:0075267"}


id: MONDO:0008546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thanatophoric dysplasia type 1 (TD1) is a form of TD characterized by short, bowed femurs, micromelia, narrow thorax, and brachydactyly.","definition_xrefs":["Orphanet:1860"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"severe achondroplasia-developmental delay-acanthosis nigricans syndrome","termid":"MONDO:0014658"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"thanatophoric dysplasia","termid":"MONDO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"thanatophoric dysplasia type 1","secondary_identifiers":["NCIT:C98583","OMIM:187600","GARD:9295","UMLS:C1868678","OMIM:270230","NANDO:1200875","MEDGEN:358383"],"synonyms":[{"name":"PLSD San Diego type","type":"related"},{"name":"Platyspondylic lethal skeletal dysplasia, San Diego type","type":"related"},{"name":"TD1","type":"exact"},{"name":"lethal short-limbed Platyspondylic dwarfism, San Diego type","type":"related"},{"name":"thanatophoric dwarfism","type":"related"},{"name":"thanatophoric dwarfism 1","type":"related"},{"name":"thanatophoric dwarfism type 1","type":"exact"},{"name":"thanatophoric dysplasia","type":"related"},{"name":"thanatophoric dysplasia type I","type":"related"},{"name":"thanatophoric dysplasia, type 1","type":"exact"},{"name":"thanatophoric dysplasia, type I","type":"related"},{"name":"type 1 thanatophoric dysplasia","type":"exact"}],"termid":"MONDO:0008546","xrefs":{"Monarch":{"xref_id":"0008546"}}}


id: PBO:0072991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCMH1 divergent transcript","termid":"PBO:0072991"}


id: GO:0021712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature candelabrum cell. Differentiation includes the processes involved in commitment of a neuroblast to a candelabrum cell fate. A candelabrum cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["PMID:15157725","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer formation","termid":"GO:0021694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candelabrum cell differentiation","termid":"GO:0021712"}


id: PBO:0059762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 36","termid":"PBO:0059762"}


id: PBO:0067796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 98","termid":"PBO:0067796"}


id: GO:1900155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone trabecula formation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of bone trabecula formation","termid":"GO:1900154"},{"relation_name":"negatively_regulates","term_name":"bone trabecula formation","termid":"GO:0060346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone trabecula formation","synonyms":[{"name":"down regulation of bone trabecula biogenesis","type":"related"},{"name":"down regulation of bone trabecula formation","type":"exact"},{"name":"down regulation of bone trabeculation","type":"exact"},{"name":"down regulation of skeletal trabecula biogenesis","type":"related"},{"name":"down regulation of skeletal trabecula formation","type":"exact"},{"name":"down regulation of skeletal trabeculation","type":"exact"},{"name":"down-regulation of bone trabecula biogenesis","type":"related"},{"name":"down-regulation of bone trabecula formation","type":"exact"},{"name":"down-regulation of bone trabeculation","type":"exact"},{"name":"down-regulation of skeletal trabecula biogenesis","type":"related"},{"name":"down-regulation of skeletal trabecula formation","type":"exact"},{"name":"down-regulation of skeletal trabeculation","type":"exact"},{"name":"downregulation of bone trabecula biogenesis","type":"related"},{"name":"downregulation of bone trabecula formation","type":"exact"},{"name":"downregulation of bone trabeculation","type":"exact"},{"name":"downregulation of skeletal trabecula biogenesis","type":"related"},{"name":"downregulation of skeletal trabecula formation","type":"exact"},{"name":"downregulation of skeletal trabeculation","type":"exact"},{"name":"inhibition of bone trabecula biogenesis","type":"related"},{"name":"inhibition of bone trabecula formation","type":"narrow"},{"name":"inhibition of bone trabeculation","type":"narrow"},{"name":"inhibition of skeletal trabecula biogenesis","type":"related"},{"name":"inhibition of skeletal trabecula formation","type":"narrow"},{"name":"inhibition of skeletal trabeculation","type":"narrow"},{"name":"negative regulation of bone trabecula biogenesis","type":"related"},{"name":"negative regulation of bone trabeculation","type":"exact"},{"name":"negative regulation of skeletal trabecula biogenesis","type":"related"},{"name":"negative regulation of skeletal trabecula formation","type":"exact"},{"name":"negative regulation of skeletal trabeculation","type":"exact"}],"termid":"GO:1900155"}


id: MONDO:1012566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal sequestra, non-human animal","termid":"MONDO:1012003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal sequestra, domestic cat","secondary_identifiers":["OMIA:002574-9685"],"termid":"MONDO:1012566","xrefs":{"Monarch":{"xref_id":"1012566"}}}


id: GO:0047422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-D-aspartate + H2O = D-aspartate + a carboxylate.","definition_xrefs":["EC:3.5.1.83","RHEA:18285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-acyl-D-aspartate deacylase activity","secondary_identifiers":["KEGG_REACTION:R02182","MetaCyc:3.5.1.83-RXN"],"synonyms":[{"name":"N-acyl-D-aspartate amidohydrolase activity","type":"related"}],"termid":"GO:0047422"}


id: GO:0120074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell differentiation, the process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cushion cell.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endocardial cushion cell differentiation","termid":"GO:0120074"}


id: GO:0043661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"bacteroid-containing symbiosome","termid":"GO:0043660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"peribacteroid membrane","termid":"GO:0043661"}


id: GO:0097592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the ventral disc of Giardia species (trophozoite stage) where two portions of the same array of microtubules overlap (the microtubule array makes a complete circle and overlaps on itself).","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc overlap zone","synonyms":[{"name":"overlap zone","type":"broad"},{"name":"ventral disk overlap zone","type":"related"}],"termid":"GO:0097592"}


id: PBO:0004021
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mads BoX protein","termid":"PBO:0004021"}


id: MOD:01821
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex reporter+balance group.","definition_xrefs":["Unimod:985","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysTMT6plex reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01821"}


id: GO:0030949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor receptor signaling pathway","termid":"GO:0030947"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor receptor signaling pathway","synonyms":[{"name":"activation of vascular endothelial growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of VEGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of VEGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of vascular endothelial growth factor receptor signalling pathway","type":"exact"},{"name":"stimulation of vascular endothelial growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of vascular endothelial growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0030949"}


id: GO:0016300
data:
  {"annotated_genes":["SJAG_02042","SJAG_04736","SJAG_03367"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106335"},{"annotations":[67016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030697"},{"annotations":[63379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141101"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from a donor to a uracil residue in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase activity","termid":"GO:0008175"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02042":null,"SJAG_03367":null,"SJAG_04736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"tRNA (uridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0016431"],"synonyms":[{"name":"tRNA (uracil) methyltransferase activity","type":"exact"}],"termid":"GO:0016300","terms_by_termid":{"GO:0030697":null,"GO:0106335":null,"GO:0141101":null}}


id: MOD:00852
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with one (18)O.","definition_xrefs":["PubMed:8382902","Unimod:366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O labeled deamidated residue","termid":"MOD:00851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}


id: GO:0051275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"beta-glucan catabolic process","synonyms":[{"name":"beta-glucan breakdown","type":"exact"},{"name":"beta-glucan catabolism","type":"exact"},{"name":"beta-glucan degradation","type":"exact"}],"termid":"GO:0051275"}


id: GO:0034663
data:
  {"annotated_genes":["SJAG_02875","SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70502,78332],"is_not":false,"summary":null,"term":"GO:0034663"}]},"cv_name":"cellular_component","definition":"A protein complex that is located in the endoplasmic reticulum and is composed of chaperone proteins, including BiP, GRP94; CaBP1, protein disulfide isomerase (PDI), ERdj3, cyclophilin B, ERp72, GRP170, UDP-glucosyltransferase, and SDF2-L1.","definition_xrefs":["PMID:12475965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00790":null,"SJAG_02875":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"endoplasmic reticulum chaperone complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ER chaperone complex","type":"exact"},{"name":"ER network complex","type":"related"},{"name":"endoplasmic reticulum network complex","type":"related"}],"termid":"GO:0034663","terms_by_termid":{"GO:0034663":null}}


id: PBO:0058813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7855","termid":"PBO:0058813"}


id: GO:0008438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: diphosphate + a purine nucleoside = phosphate + a purine mononucleotide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-5-phosphate kinase (obsolete GO:0008438)","synonyms":[{"name":"1-phosphatidylinositol-5-phosphate kinase","type":"exact"}],"termid":"GO:0008438"}


id: GO:0042981
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79342,73713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043065"}]},"cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5633008","Reactome:R-HSA-169911"],"synonyms":[{"name":"apoptosis regulator activity","type":"related"},{"name":"regulation of apoptosis","type":"narrow"}],"termid":"GO:0042981","terms_by_termid":{"GO:0043065":null}}


id: GO:0072343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of pancreatic stellate cells, resulting in the expansion of a pancreatic stellate cell population. Pancreatic stellate cells are found in the periacinar space of the exocrine pancreas and in perivascular and periductal regions of the pancreas, and have long cytoplasmic processes that encircle the base of the acinus.","definition_xrefs":["CL:0002410","GOC:mah","PMID:17200706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic stellate cell proliferation","termid":"GO:0072343"}


id: GO:1901716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gamma-aminobutyric acid catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid catabolic process","termid":"GO:1901715"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid catabolic process","termid":"GO:0009450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid catabolic process","synonyms":[{"name":"down regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"down regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"down regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"down regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"down regulation of GABA catabolic process","type":"exact"},{"name":"down regulation of GABA catabolism","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"down-regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"down-regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"down-regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"down-regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"down-regulation of GABA catabolic process","type":"exact"},{"name":"down-regulation of GABA catabolism","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"downregulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"downregulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"downregulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"downregulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"downregulation of GABA catabolic process","type":"exact"},{"name":"downregulation of GABA catabolism","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"inhibition of 4-aminobutanoate catabolic process","type":"exact"},{"name":"inhibition of 4-aminobutanoate catabolism","type":"exact"},{"name":"inhibition of 4-aminobutyrate catabolic process","type":"exact"},{"name":"inhibition of 4-aminobutyrate catabolism","type":"exact"},{"name":"inhibition of GABA catabolic process","type":"exact"},{"name":"inhibition of GABA catabolism","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid catabolic process","type":"narrow"},{"name":"inhibition of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid degradation","type":"exact"},{"name":"negative regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"negative regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"negative regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"negative regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"negative regulation of GABA catabolic process","type":"exact"},{"name":"negative regulation of GABA catabolism","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid degradation","type":"exact"}],"termid":"GO:1901716"}


id: PBO:0059389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S24","termid":"PBO:0059389"}


id: MOD:00441
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a geranylgeranyl group.","definition_xrefs":["PubMed:15609361","DeltaMass:0","Unimod:48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"geranylgeranylated residue","synonyms":[{"name":"Geranyl-geranyl","type":"related"},{"name":"GeranylGeranyl","type":"related"},{"name":"Geranylgeranylation","type":"exact"},{"name":"GergerRes","type":"exact"}],"termid":"MOD:00441"}


id: GO:0004329
data:
  {"annotated_genes":["SJAG_04156","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64072,64864],"is_not":false,"summary":null,"term":"GO:0004329"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + formate + tetrahydrofolate = ADP + phosphate + 10-formyltetrahydrofolate.","definition_xrefs":["EC:6.3.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"formate-tetrahydrofolate ligase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-6801456","RHEA:20221","MetaCyc:FORMATETHFLIG-RXN","Reactome:R-HSA-5696839","Reactome:R-HSA-200711"],"synonyms":[{"name":"10-formyl-THF synthetase activity","type":"exact"},{"name":"10-formyltetrahydrofolate synthetase activity","type":"related"},{"name":"formate:tetrahydrofolate ligase (ADP-forming)","type":"related"},{"name":"formyltetrahydrofolate synthetase activity","type":"related"},{"name":"tetrahydrofolate formylase activity","type":"related"},{"name":"tetrahydrofolic formylase activity","type":"related"}],"termid":"GO:0004329","terms_by_termid":{"GO:0004329":null}}


id: MONDO:0006000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of peritonitis seen in patients with tuberculosis, characterized by lesion either as a miliary form or as a pelvic mass on the peritoneal surfaces. Most patients have ascites, abdominal swelling, abdominal pain, and other systemic symptoms such as fever; weight loss; and anemia.","definition_xrefs":["MESH:D014395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal tuberculosis","termid":"MONDO:0000369"},{"relation_name":"is_a","term_name":"infectious peritonitis","termid":"MONDO:0004522"},{"relation_name":"is_a","term_name":"gastrointestinal tuberculosis","termid":"MONDO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"tuberculous peritonitis","secondary_identifiers":["MEDGEN:22516","SCTID:44572005","ICD9:014.0","ICD10CM:A18.31","ICD9:014.01","icd11.foundation:925657864","DOID:9801","ICD9:014.00","UMLS:C0041325","EFO:0007529"],"synonyms":[{"name":"Mycobacterium tuberculosis caused peritonitis","type":"exact"},{"name":"Mycobacterium tuberculosis peritonitis","type":"exact"}],"termid":"MONDO:0006000","xrefs":{"Monarch":{"xref_id":"0006000"}}}


id: SO:0001012
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence with catalytic activity.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"enzymatic","termid":"SO:0001185"},{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAzyme","synonyms":[{"name":"DNA enzyme","type":"exact"},{"name":"catalytic DNA","type":"exact"},{"name":"deoxyribozyme","type":"related"}],"termid":"SO:0001012"}


id: FYPO:0008027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the rate of acid phosphatase activation during phosphate starvation is increased.","definition_xrefs":["PMID:35012333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of acid phosphatase activation during phosphate starvation","synonyms":[{"name":"increased acid phosphatase kinetics","type":"exact"}],"termid":"FYPO:0008027"}


id: FYPO:0001554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA processing is abnormal. tRNA processing is the conversion a primary tRNA transcript into a mature tRNA molecules.","definition_xrefs":["GO:0008033","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal tRNA processing","synonyms":[{"name":"abnormal tRNA processing during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001554"}


id: PR:O13974
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin thioesterase OTU1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13312:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin thioesterase otu1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.14","secondary_identifiers":["UniProtKB:O13974"],"synonyms":[{"name":"OTU domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC24C9.14","type":"related"},{"name":"Spom972h-YOD1","type":"exact"},{"name":"meiotically up-regulated gene 141 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mug141","type":"related"}],"termid":"PR:O13974"}


id: GO:0034012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FAD = AMP + H+ + riboflavin cyclic-4',5'-phosphate.","definition_xrefs":["RHEA:13729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0009975","GO:0003674"],"is_obsolete":false,"name":"FAD-AMP lyase (cyclizing) activity","secondary_identifiers":["EC:4.6.1.15"],"synonyms":[{"name":"FAD AMP-lyase (cyclic-FMN-forming) activity","type":"related"},{"name":"FAD AMP-lyase (riboflavin-cyclic-4',5'-phosphate-forming) activity","type":"related"},{"name":"FMN cyclase activity","type":"related"}],"termid":"GO:0034012"}


id: FYPO:0001753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow normally (i.e. indistinguishably from wild type) under anaerobic conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal anaerobic cell population growth","synonyms":[{"name":"normal anaerobic growth","type":"broad"}],"termid":"FYPO:0001753"}


id: GO:0075163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-protein beta subunit-mediated signal transduction in response to host (obsolete GO:0075163)","synonyms":[{"name":"positive regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075163"}


id: MONDO:0037792
data:
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id: GO:0019852
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id: GO:0098672
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id: PBO:0042669
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id: PBO:0001793
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id: MONDO:0006100
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id: GO:0048316
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id: MONDO:0007150
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id: GO:0061851
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id: GO:0160126
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id: PBO:0082147
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id: PBO:0046098
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id: GO:0051052
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id: GO:0031985
data:
  {"annotated_genes":["SJAG_04095","SJAG_04739","SJAG_03278","SJAG_01025","SJAG_03634","SJAG_00816","SJAG_01276","SJAG_01516","SJAG_04770","SJAG_03555","SJAG_03347","SJAG_00567","SJAG_04112"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77230],"is_not":false,"summary":null,"term":"GO:0031985"},{"annotations":[95807,75444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000137"},{"annotations":[71088,76250,97846,78317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005797"},{"annotations":[95808,99268,78316,71087,76249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000138"},{"annotations":[69731],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[104710,97640,87265,117790],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"Any of the thin, flattened membrane-bounded compartments that form the central portion of the Golgi complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"},{"relation_name":"part_of","term_name":"Golgi stack","termid":"GO:0005795"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01516":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04739":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"Golgi cisterna","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao561419532"],"synonyms":[{"name":"Golgi apparatus cisterna","type":"exact"},{"name":"Golgi lamellae","type":"related"}],"termid":"GO:0031985","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005797":null,"GO:0031985":null,"GO:0140497":null}}


id: PBO:0088589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit, TREX complex subunit Sus1","termid":"PBO:0088589"}


id: PBO:0055439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2870","termid":"PBO:0055439"}


id: FYPO:0007844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the monomethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:17363370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 monomethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 monomethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 monomethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 monomethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007844"}


id: GO:0097485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of a neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"part_of","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection guidance","synonyms":[{"name":"neurite guidance","type":"narrow"},{"name":"neuron process guidance","type":"exact"},{"name":"neuron protrusion guidance","type":"exact"},{"name":"neuronal cell projection guidance","type":"exact"}],"termid":"GO:0097485"}


id: PBO:0043328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 3 pseudogene 2","termid":"PBO:0043328"}


id: GO:0033093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, elongated, rod-shaped secretory granule characteristic of vascular endothelial cells that contain a number of structurally and functionally distinct proteins, of which the best characterized are von Willebrand factor (VWF) and P-selectin. Weibel-Palade bodies are formed from the trans-Golgi network in a process that depends on VWF, which is densely packed in a highly organized manner, and on coat proteins that remain associated with the granules. Upon cell stimulation, regulated exocytosis releases the contained proteins to the cell surface, where they act in the recruitment of platelets and leukocytes and in inflammatory and vasoactive responses.","definition_xrefs":["PMID:16087708","PMID:11935287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"},{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Weibel-Palade body","secondary_identifiers":["Wikipedia:Weibel-Palade_body"],"termid":"GO:0033093"}


id: PBO:0063133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0063133"}


id: GO:1902422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of H2 (dihydrogen).","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","PMID:20395274","PMID:20692761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"hydrogen metabolic process","termid":"GO:1902421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen biosynthetic process","synonyms":[{"name":"H2 biosynthesis","type":"exact"},{"name":"dihydrogen synthesis","type":"exact"},{"name":"hydrogen anabolism","type":"exact"},{"name":"hydrogen biosynthesis","type":"exact"},{"name":"hydrogen formation","type":"exact"},{"name":"hydrogen generation","type":"exact"},{"name":"hydrogen production","type":"exact"},{"name":"hydrogen synthesis","type":"exact"},{"name":"molecular hydrogen biosynthesis","type":"exact"}],"termid":"GO:1902422"}


id: GO:0046172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of octanol, the 8-carbon alcohol with the formula C8H17OH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanol metabolic process","termid":"GO:0006070"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"fatty alcohol catabolic process","termid":"GO:1903174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"octanol catabolic process","synonyms":[{"name":"octanol breakdown","type":"exact"},{"name":"octanol catabolism","type":"exact"},{"name":"octanol degradation","type":"exact"}],"termid":"GO:0046172"}


id: MOD:01386
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to 3-hydroxy-L-valine.","definition_xrefs":["PubMed:7328054","ChEBI:141793","RESID:AA0463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-valine","synonyms":[{"name":"(2S)-2-amino-3-hydroxy-3-methylbutanoic acid","type":"exact"},{"name":"3-hydroxy-L-valine","type":"exact"},{"name":"3-hydroxyvaline","type":"exact"},{"name":"3HyVal","type":"exact"},{"name":"MOD_RES 3-hydroxyvaline","type":"exact"}],"termid":"MOD:01386"}


id: PBO:0044013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1 pseudogene 2","termid":"PBO:0044013"}


id: MONDO:1011817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal sac gland carcinoma, non-human animal","secondary_identifiers":["OMIA:001500"],"termid":"MONDO:1011817","xrefs":{"Monarch":{"xref_id":"1011817"}}}


id: PBO:0062014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 3","termid":"PBO:0062014"}


id: PBO:0082293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Argininosuccinate lyase; catalyzes the final step in the arginine biosynthesis pathway","termid":"PBO:0082293"}


id: MONDO:0011467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete human herpesvirus type 6, integrated (obsolete MONDO:0011467)","secondary_identifiers":["OMIM:604474","MESH:C565771"],"synonyms":[{"name":"human herpesvirus type 6, integrated","type":"exact"}],"termid":"MONDO:0011467","xrefs":{"Monarch":{"xref_id":"0011467"}}}


id: PBO:0062552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily Q member 2","termid":"PBO:0062552"}


id: FYPO:0008015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glucose into the cell is decreased with respect to wild-type.","definition_xrefs":["PMID:35781263","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucose import","termid":"FYPO:0001827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased glucose import","termid":"FYPO:0008015"}


id: MONDO:0958238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperemesis gravidarum, susceptibility to","secondary_identifiers":["OMIM:620730","UMLS:C5889860","MEDGEN:1857498"],"termid":"MONDO:0958238","xrefs":{"Monarch":{"xref_id":"0958238"}}}


id: GO:0051190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"},{"relation_name":"part_of","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"prosthetic group catabolic process","synonyms":[{"name":"coenzyme and prosthetic group catabolic process","type":"broad"},{"name":"coenzyme and prosthetic group catabolism","type":"broad"},{"name":"prosthetic group breakdown","type":"exact"},{"name":"prosthetic group catabolism","type":"exact"},{"name":"prosthetic group degradation","type":"exact"}],"termid":"GO:0051190"}


id: GO:1900617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of emericellamide A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"emericellamide biosynthetic process","termid":"GO:1900557"},{"relation_name":"is_a","term_name":"emericellamide A metabolic process","termid":"GO:1900615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"emericellamide A biosynthetic process","synonyms":[{"name":"emericellamide A anabolism","type":"exact"},{"name":"emericellamide A biosynthesis","type":"exact"},{"name":"emericellamide A formation","type":"exact"},{"name":"emericellamide A synthesis","type":"exact"}],"termid":"GO:1900617"}


id: PBO:0045978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain containing 4","termid":"PBO:0045978"}


id: PBO:0056211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B6","termid":"PBO:0056211"}


id: GO:0034083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A polyketide synthase complex that consists of two identical ketosynthase polypeptides.","definition_xrefs":["GOC:cb","PMID:12636085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide synthase complex","termid":"GO:0034081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"type III polyketide synthase complex","synonyms":[{"name":"type III PKS","type":"exact"},{"name":"type III PKS complex","type":"exact"},{"name":"type III polyketide synthase","type":"exact"}],"termid":"GO:0034083"}


id: PBO:0089375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic10","termid":"PBO:0089375"}


id: PBO:0000256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase (predicted)","termid":"PBO:0000256"}


id: GO:0140215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed import of D-aspartate from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:27663541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"D-aspartate import across plasma membrane","termid":"GO:0070779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of D-aspartate import across plasma membrane","termid":"GO:0140215"}


id: PBO:0029776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_branched,_curved,_elongated_vegetative_cell","termid":"PBO:0029776"}


id: PBO:0046742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 1 like","termid":"PBO:0046742"}


id: PBO:0090036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3844 family transmembrane protein, conserved in fungi","termid":"PBO:0090036"}


id: PBO:0060316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase pseudogene 1","termid":"PBO:0060316"}


id: GO:0015839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cadaverine, 1,5-pentanediamine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cadaverine transport","termid":"GO:0015839"}


id: MONDO:0008615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tune deafness","secondary_identifiers":["UMLS:C1860646","OMIM:191200","ICD9:389.8","MEDGEN:349862","MESH:C566019","SCTID:55647004"],"synonyms":[{"name":"Dysmelodia","type":"related"},{"name":"amusia, congenital","type":"related"},{"name":"tone deafness","type":"related"},{"name":"tune deafness","type":"exact"}],"termid":"MONDO:0008615","xrefs":{"Monarch":{"xref_id":"0008615"}}}


id: SO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of the HERV mobile element with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"Endogenous_Retrovirus_LTR_retrotransposon","termid":"SO:0002268"},{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV_deletion","synonyms":[{"name":"HERV deletion","type":"exact"}],"termid":"SO:0002067"}


id: GO:0044202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the host nuclear envelope; continuous with the endoplasmic reticulum of the host cell and sometimes studded with ribosomes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host organelle outer membrane","termid":"GO:0039661"},{"relation_name":"is_a","term_name":"host cell nuclear membrane","termid":"GO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear outer membrane","termid":"GO:0044202"}


id: GO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a distal tubule are generated and organized. The distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tubule morphogenesis","termid":"GO:0072156"}


id: PBO:0088650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, guanine nucleotide Ggc1","termid":"PBO:0088650"}


id: FYPO:0008081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the growth of a population of cells is decreased relative to normal in the vegetative growth phase of the life cycle when the population is co-cultured with wild-type cells. Decreased growth may reflect a reduced growth rate (i.e. slower growth), growth that occurs to a lesser extent than normal, or both.","definition_xrefs":["PMID:36302945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0001985","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"decreased vegetative cell population growth when co-cultured with wild-type cells","synonyms":[{"name":"adaptive growth","type":"related"}],"termid":"FYPO:0008081"}


id: GO:0071103
data:
  {"annotated_genes":["SJAG_02394","SJAG_04418","SJAG_04816","SJAG_03567","SJAG_05193"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70219,118679,72612,112922,59146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006265"}]},"cv_name":"biological_process","definition":"A cellular process that results in a change in the spatial configuration of a DNA molecule. A conformation change can bend DNA, or alter the, twist, writhe, or linking number of a DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02394":null,"SJAG_03567":null,"SJAG_04418":null,"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA conformation change","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA conformation modification","type":"exact"}],"termid":"GO:0071103","terms_by_termid":{"GO:0006265":null}}


id: GO:0061766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the force with which blood travels through the lungs.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:22161164","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lung blood pressure","termid":"GO:0014916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung blood pressure","synonyms":[{"name":"positive regulation of pulmonary blood pressure","type":"exact"}],"termid":"GO:0061766"}


id: GO:0120199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer segment of a vertebrate cone photoreceptor that contains membrane discs that are contiguous with the ciliary membrane and containing opsin photoreceptor proteins.","definition_xrefs":["PMID:6771304","GOC:krc","PMID:19501669","PMID:26574505","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor outer segment","termid":"GO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cone photoreceptor outer segment","termid":"GO:0120199"}


id: PBO:0050992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 88","termid":"PBO:0050992"}


id: PBO:0027357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_generation_of_precursor_metabolites_and_energy_gene_mRNA_during_vegetative_growth","termid":"PBO:0027357"}


id: GO:0070529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from L-tryptophan to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-tryptophan aminotransferase activity","termid":"GO:0070529"}


id: PR:P49777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tigger transposable element-derived protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.04c","secondary_identifiers":["UniProtKB:P49777"],"synonyms":[{"name":"Spom972h-TIGD4","type":"exact"}],"termid":"PR:P49777"}


id: PBO:0082904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cystathionine beta-synthase; catalyzes synthesis of cystathionine from serine and homocysteine, the first committed step in cysteine biosynthesis; responsible for hydrogen sulfide generation; advances passage through START by promoting cell growth which requires catalytic activity, and reducing critical cell size independent of catalytic activity; mutations in human ortholog CBS cause homocystinuria; human CBS can complement yeast null mutant","termid":"PBO:0082904"}


id: PBO:0064124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain containing, cytoplasmic","termid":"PBO:0064124"}


id: GO:1901913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of capsule organization","synonyms":[{"name":"regulation of capsule organisation","type":"exact"},{"name":"regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901913"}


id: PBO:0110505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBXN2A pseudogene 1","termid":"PBO:0110505"}


id: FYPO:0004537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle spindle assembly checkpoint signaling does not occur. As a result, the septation initiation network (SIN) signaling pathway is activated despite activation of the mitotic spindle assembly checkpoint (SAC). Normally, under conditions that activate the SAC, SIN activation is inhibited and the cell cycle arrests in anaphase. In this phenotype, premature SIN activation leads to premature cytokinesis and the formation of cut cells.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:11952833"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"abolished response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002518"},{"relation_name":"is_a","term_name":"abnormal response to mitotic cell cycle spindle assembly checkpoint signaling","termid":"FYPO:0004536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"mitotic spindle assembly checkpoint override","synonyms":[{"name":"SIN activation in presence of active mitotic SAC","type":"exact"},{"name":"abolished response to mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"mitotic SAC override","type":"exact"},{"name":"mitotic cell cycle spindle assembly checkpoint override","type":"exact"},{"name":"septation initiation signaling activation in presence of active mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0004537"}


id: GO:1903088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which 5-amino-1-ribofuranosylimidazole-4-carboxamide is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:24778186","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"azole transmembrane transport","termid":"GO:0045117"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"5-amino-1-ribofuranosylimidazole-4-carboxamide transmembrane transport","termid":"GO:1903088"}


id: MONDO:0800372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 29","secondary_identifiers":["DOID:0080276","MEDGEN:1625238","UMLS:C4539715"],"synonyms":[{"name":"JBTS29","type":"exact"}],"termid":"MONDO:0800372","xrefs":{"Monarch":{"xref_id":"0800372"}}}


id: PBO:0111910
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domains","termid":"PBO:0111910"}


id: SO:0001197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of (S)-GNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"S_GNA","termid":"SO:0001196"},{"relation_name":"is_a","term_name":"GNA_oligo","termid":"SO:0001193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S_GNA_oligo","synonyms":[{"name":"(S)-glycerol nucleic acid","type":"exact"},{"name":"(S)-glycol nucleic acid","type":"exact"},{"name":"S GNA oligo","type":"exact"}],"termid":"SO:0001197"}


id: PBO:0030359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_hypoxia","termid":"PBO:0030359"}


id: PBO:0045049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide dehydrogenase","termid":"PBO:0045049"}


id: MOD:00510
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex HexNAc","definition_xrefs":["PubMed:1694179","OMSSA:183","PubMed:5490222","RESID:AA0151#var","Unimod:142","PubMed:111247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc1dHex1 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(1)dHex(1)","type":"related"},{"name":"HexNAc1dHex1","type":"related"},{"name":"dHexHexNAcN","type":"exact"}],"termid":"MOD:00510"}


id: PBO:0026678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_lead","termid":"PBO:0026678"}


id: SO:0100001
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a peptide that is involved in a biochemical function.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_motif","termid":"SO:0001067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"biochemical_region_of_peptide","synonyms":[{"name":"biochemical motif","type":"exact"},{"name":"biochemical region of peptide","type":"exact"},{"name":"biochemical_region","type":"related"}],"termid":"SO:0100001"}


id: MONDO:0014436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the TTC8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"TTC8-related ciliopathy","termid":"MONDO:1040049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 8","secondary_identifiers":["DOID:0110130","MESH:C565917","UMLS:C1859566","OMIM:615985","GARD:10207","MEDGEN:347181"],"synonyms":[{"name":"BBS8","type":"exact"},{"name":"Bardet-Biedl syndrome 8","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in TTC8","type":"exact"},{"name":"Bardet-Biedl syndrome type 8","type":"exact"},{"name":"TTC8 Bardet-Biedl syndrome","type":"exact"}],"termid":"MONDO:0014436","xrefs":{"Monarch":{"xref_id":"0014436"}}}


id: PBO:0089649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery monothiol glutaredoxin Grx3","termid":"PBO:0089649"}


id: GO:0021647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the vestibulocochlear nerve to attain its fully functional state. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","GOC:dph","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve development","termid":"GO:0021562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve maturation","synonyms":[{"name":"CN VIII maturation","type":"related"},{"name":"auditory nerve maturation","type":"related"}],"termid":"GO:0021647"}


id: GO:0097384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of lipids, as carried out by individual cells.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular lipid biosynthetic process (obsolete GO:0097384)","synonyms":[{"name":"cellular lipid anabolism","type":"exact"},{"name":"cellular lipid biosynthesis","type":"exact"},{"name":"cellular lipid formation","type":"exact"},{"name":"cellular lipid synthesis","type":"exact"}],"termid":"GO:0097384"}


id: PBO:0004686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein Git1","termid":"PBO:0004686"}


id: GO:0002855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated immune response to a tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"regulates","term_name":"natural killer cell mediated immune response to tumor cell","termid":"GO:0002423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002855"}


id: MONDO:0009631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A microphthalmia that has material basis in variation in the chromosomal region 14q32.","definition_xrefs":["PMID:9545413","DOID:0060840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated microphthalmia 1","secondary_identifiers":["MESH:C565377","MEDGEN:381546","OMIM:251600","UMLS:C1855052"],"synonyms":[{"name":"MCOP1","type":"exact"},{"name":"Mcop","type":"related"},{"name":"anophthalmia, clinical, isolated","type":"related"},{"name":"isolated microphthalmia type 1","type":"exact"},{"name":"microphthalmia, isolated 1","type":"related"},{"name":"microphthalmos, autosomal recessive","type":"related"}],"termid":"MONDO:0009631","xrefs":{"Monarch":{"xref_id":"0009631"}}}


id: MONDO:0008989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrulline transport defect","secondary_identifiers":["MESH:C536207","OMIM:215720","UMLS:C1859084","MEDGEN:349092"],"synonyms":[{"name":"citrulline transport defect","type":"exact"}],"termid":"MONDO:0008989","xrefs":{"Monarch":{"xref_id":"0008989"}}}


id: PBO:0063317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase 1","termid":"PBO:0063317"}


id: PBO:0047747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 11","termid":"PBO:0047747"}


id: MONDO:0022553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BD syndrome","termid":"MONDO:0022553","xrefs":{"Monarch":{"xref_id":"0022553"}}}


id: MONDO:0016501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hermansky-Pudlak syndrome with pulmonary fibrosis as a complication includes two types (HPS-1 and HPS-4) of Hermansky-Pudlak syndrome (HPS), a multi-system disorder characterized by oculocutaneous albinism, bleeding diathesis and, in some cases, pulmonary fibrosis or granulomatous colitis.","definition_xrefs":["Orphanet:231500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to childhood","termid":"MONDO:0017014"},{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome","termid":"MONDO:0019312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome with pulmonary fibrosis","secondary_identifiers":["UMLS:C5679834","GARD:17168","icd11.foundation:1086187623","ICD10CM:E70.3","MEDGEN:1843223"],"synonyms":[{"name":"HPS with pulmonary fibrosis","type":"exact"}],"termid":"MONDO:0016501","xrefs":{"Monarch":{"xref_id":"0016501"}}}


id: PBO:0050269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 47","termid":"PBO:0050269"}


id: GO:0051567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:pr","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 methylation (obsolete GO:0051567)","synonyms":[{"name":"histone H3 K9 methylation","type":"exact"},{"name":"histone H3K9me","type":"exact"},{"name":"histone lysine H3 K9 methylation","type":"exact"}],"termid":"GO:0051567"}


id: PBO:0029665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_topoisomerase_type_I_activity","termid":"PBO:0029665"}


id: FYPO:0002066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has no septum, is elongated, and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated aseptate vegetative cell","termid":"FYPO:0000950"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable aseptate vegetative cell","termid":"FYPO:0003931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000004","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable elongated aseptate cell","synonyms":[{"name":"inviable elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated aseptate cell during vegetative growth","type":"exact"},{"name":"inviable long aseptate cell","type":"exact"},{"name":"lethal; elongated aseptate cell","type":"exact"}],"termid":"FYPO:0002066"}


id: PBO:0087686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the NuA3 histone acetyltransferase complex; this complex acetylates histone H3; contains PHD finger domain that interacts with methylated histone H3; shares significant sequence identity with the human candidate tumor suppressor p33-ING1 in C-terminal region","termid":"PBO:0087686"}


id: PBO:0059453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSANTD3 pseudogene 1","termid":"PBO:0059453"}


id: GO:0035235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by glutamate binding to a glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["ISBN:0198506732","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"},{"relation_name":"is_a","term_name":"ligand-gated ion channel signaling pathway","termid":"GO:1990806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ionotropic glutamate receptor signaling pathway","synonyms":[{"name":"ionotropic glutamate receptor signalling pathway","type":"exact"}],"termid":"GO:0035235"}


id: PBO:0071642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 6","termid":"PBO:0071642"}


id: PBO:0057757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1915 host gene","termid":"PBO:0057757"}


id: PBO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex subunit Eaf6 (predicted)","termid":"PBO:0001709"}


id: PBO:0036214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0036214"}


id: PBO:0084368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-interacting protein in SNARE complex assembly machinery; acts at late step in secretion; interacts with membranes through two distinct binding sites; shows genetic and physical interactions with Sec1p; required for prospore membrane formation during sporulation; N-terminus closely associates with plasma membrane, C-terminus colocalizes with Sec4p on intracellular membranes; relocalizes from bud neck to nucleus upon DNA replication stress","termid":"PBO:0084368"}


id: GO:0017075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a syntaxin-1 SNAP receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syntaxin binding","termid":"GO:0019905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"syntaxin-1 binding","termid":"GO:0017075"}


id: GO:0061661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of FAT10 to a substrate protein via the reaction X-FAT10 + S = X + S-FAT10, where X is either an E2 or E3 enzyme, the X-FAT10 linkage is a thioester bond, and the S-FAT10 linkage is an isopeptide bond between the C-terminal glycine of FAT10 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAT10 transferase activity","termid":"GO:0019775"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0019787","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"FAT10 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061661"}


id: PBO:0005222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Ccr4 (predicted)","termid":"PBO:0005222"}


id: FYPO:0004006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to menadione is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during cellular response to menadione","synonyms":[{"name":"normal protein accumulation during cellular response to menadione","type":"related"},{"name":"normal protein level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to menadione during vegetative growth","type":"exact"}],"termid":"FYPO:0004006"}


id: PBO:0085823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression is regulated by phosphate levels; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and vacuole; protein abundance increases in response to DNA replication stress","termid":"PBO:0085823"}


id: GO:0030661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a chitosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"chitosome","termid":"GO:0045009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"chitosome membrane","termid":"GO:0030661"}


id: PBO:0047565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 16","termid":"PBO:0047565"}


id: GO:0019506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylmercury acetate, an organomercurial compound composed of a mercury atom attached to a benzene ring and an acetate group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"phenylmercury acetate metabolic process","termid":"GO:0046412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylmercury acetate catabolic process","secondary_identifiers":["MetaCyc:P641-PWY"],"synonyms":[{"name":"phenylmercury acetate breakdown","type":"exact"},{"name":"phenylmercury acetate catabolism","type":"exact"},{"name":"phenylmercury acetate degradation","type":"exact"}],"termid":"GO:0019506"}


id: MONDO:0023267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goldstein hutt syndrome","secondary_identifiers":["UMLS:C2931465","MESH:C537282","MEDGEN:419084"],"synonyms":[{"name":"long eyelashes, cataract, and hereditary spherocytosis","type":"related"},{"name":"trichomegaly, cataract, and hereditary spherocytosis","type":"related"}],"termid":"MONDO:0023267","xrefs":{"Monarch":{"xref_id":"0023267"}}}


id: MONDO:0007022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic, destructive infection of the kidney characterized by lipid-laden macrophages in the setting of obstruction secondary to infected renal stones, most commonly caused by Proteus or Escherichia coli.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic pyelonephritis","termid":"MONDO:0001110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"xanthogranulomatous pyelonephritis","secondary_identifiers":["UMLS:C0034188","EFO:1001244","MedDRA:10074389","SCTID:38898003","NCIT:C123038","MESH:D011705","ICD9:582.89","DOID:11401","MEDGEN:19591"],"synonyms":[{"name":"xanthogranulomatous pyelonephritis","type":"exact"}],"termid":"MONDO:0007022","xrefs":{"Monarch":{"xref_id":"0007022"}}}


id: GO:1901224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the non-canonical NF-kappaB cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical NF-kappaB signal transduction","termid":"GO:1901222"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"non-canonical NF-kappaB signal transduction","termid":"GO:0038061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of non-canonical NF-kappaB signal transduction","secondary_identifiers":["GO:0008588","GO:0042346"],"synonyms":[{"name":"activation of NIK/NF-kappaB cascade","type":"narrow"},{"name":"activation of non-canonical NF-KB signaling","type":"exact"},{"name":"activation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"activation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"activation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"positive regulation of NF-kappaB import into nucleus","type":"narrow"},{"name":"positive regulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"positive regulation of NIK/NF-kappaB signaling","type":"exact"},{"name":"positive regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"positive regulation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"positive regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"positive regulation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"up regulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"up regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"up regulation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"up regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"up regulation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"up-regulation of NIK/NF-kappaB cascade","type":"related"},{"name":"up-regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"up-regulation of noncanonical NF-kappaB signaling","type":"broad"},{"name":"up-regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"up-regulation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"upregulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"upregulation of non-canonical NF-KB signaling","type":"exact"},{"name":"upregulation of noncanonical NF-kappaB signaling","type":"broad"},{"name":"upregulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"upregulation of p52-dependent NF-kappaB signaling","type":"narrow"}],"termid":"GO:1901224"}


id: GO:1990448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an exon-exon junction complex, a protein complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.","definition_xrefs":["PMID:24967911","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"exon-exon junction complex binding","synonyms":[{"name":"EJC binding","type":"exact"}],"termid":"GO:1990448"}


id: PBO:0044712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11","termid":"PBO:0044712"}


id: GO:0003829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-(1->3)-N-acetyl-D-galactosaminyl-R = UDP + beta-D-galactosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->6)]-N-acetyl-D-galactosaminyl-R. This reaction is the addition of N-acetyl-alpha-D-glucosamine to the core 1 structure of O-glycans forming core 2.","definition_xrefs":["EC:2.4.1.102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-914018","RHEA:18705","Reactome:R-HSA-914012","MetaCyc:2.4.1.102-RXN"],"synonyms":[{"name":"O-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:O-glycosyl-glycoprotein (N-acetyl-D-glucosamine to N-acetyl-D-galactosamine of beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R) beta-1,6-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"beta(6)-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"beta6-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"core 2 acetylglucosaminyltransferase activity","type":"related"},{"name":"core 6-beta-GlcNAc-transferase A","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta-(1,6)-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta-(1->6)-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0003829"}


id: PBO:0066923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 225","termid":"PBO:0066923"}


id: MONDO:1010965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cauda equina syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cauda equina syndrome, non-human animal","termid":"MONDO:1010227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cauda equina syndrome, dog","secondary_identifiers":["OMIA:000170-9615"],"termid":"MONDO:1010965","xrefs":{"Monarch":{"xref_id":"1010965"}}}


id: GO:0048370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the lateral mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"lateral mesoderm morphogenesis","termid":"GO:0048369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesoderm formation","secondary_identifiers":["Reactome:R-HSA-9758920"],"synonyms":[{"name":"lateral plate mesoderm biosynthesis","type":"exact"},{"name":"lateral plate mesoderm formation","type":"exact"}],"termid":"GO:0048370"}


id: MONDO:0009924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypocalcemic vitamin D-dependent rickets (VDDR-I) is an early-onset hereditary vitamin D metabolism disorder characterized by severe hypocalcemia leading to osteomalacia and rachitic bone deformations, and moderate hypophosphatemia.","definition_xrefs":["Orphanet:289157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcemic rickets","termid":"MONDO:0017323"},{"relation_name":"is_a","term_name":"vitamin D-dependent rickets","termid":"MONDO:0024299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"vitamin D-dependent rickets, type 1","secondary_identifiers":["SCTID:67049004","GARD:17319","MEDGEN:124344","NCIT:C131073","NANDO:1200782","icd11.foundation:1270705227","MESH:C562688","UMLS:C0268689"],"synonyms":[{"name":"1 Alpha-hydroxylase deficiency","type":"exact"},{"name":"1-alpha-hydroxylase deficiency","type":"exact"},{"name":"PDDRI","type":"exact"},{"name":"VDDI","type":"exact"},{"name":"VDDR-I","type":"exact"},{"name":"VDDR1","type":"exact"},{"name":"hypocalcemic vitamin D-dependent rickets","type":"exact"},{"name":"pseudo vitamin-D deficient rickets","type":"exact"},{"name":"pseudovitamin D-deficient rickets","type":"exact"},{"name":"selective 1-alpha, 25-hydroxyvitamin D3 deficiency","type":"exact"},{"name":"vitamin D 1 Alpha-Hydroxylase deficiency","type":"exact"},{"name":"vitamin D dependency, type 1","type":"related"},{"name":"vitamin D dependent rickets type I","type":"exact"},{"name":"vitamin D-dependency type I","type":"exact"},{"name":"vitamin D-dependent rickets type 1","type":"exact"}],"termid":"MONDO:0009924","xrefs":{"Monarch":{"xref_id":"0009924"}}}


id: GO:0051298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"centrosome duplication","synonyms":[{"name":"centrosome replication","type":"exact"}],"termid":"GO:0051298"}


id: MONDO:0100411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute myeloid leukemia, NPM1 gene mutation (obsolete MONDO:0100411)","termid":"MONDO:0100411","xrefs":{"Monarch":{"xref_id":"0100411"}}}


id: GO:0061050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue growth","termid":"GO:0055021"},{"relation_name":"regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"}


id: PBO:0070427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 5","termid":"PBO:0070427"}


id: PBO:0063037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 4","termid":"PBO:0063037"}


id: MONDO:0008257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet responsiveness to adrenaline, depressed","secondary_identifiers":["MEDGEN:358151","OMIM:173580","UMLS:C1868200"],"synonyms":[{"name":"platelet responsiveness to adrenaline, depressed","type":"exact"}],"termid":"MONDO:0008257","xrefs":{"Monarch":{"xref_id":"0008257"}}}


id: MONDO:0012107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropathy, hereditary sensory and autonomic, adult-onset, with anosmia","secondary_identifiers":["OMIM:608720","MESH:C563870","UMLS:C1837492","MEDGEN:324809"],"synonyms":[{"name":"neuropathy, hereditary sensory and autonomic, adult-onset, with anosmia","type":"exact"}],"termid":"MONDO:0012107","xrefs":{"Monarch":{"xref_id":"0012107"}}}


id: GO:0003716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that brings about termination of transcription by RNA polymerase I.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase I transcription termination factor activity (obsolete GO:0003716)","synonyms":[{"name":"Pol I transcription termination factor activity","type":"exact"},{"name":"RNA polymerase I transcription termination factor activity","type":"exact"}],"termid":"GO:0003716"}


id: GO:0030980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"alpha-glucan catabolic process","synonyms":[{"name":"alpha-glucan breakdown","type":"exact"},{"name":"alpha-glucan catabolism","type":"exact"},{"name":"alpha-glucan degradation","type":"exact"}],"termid":"GO:0030980"}


id: PBO:0039817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor GTPase activating protein 1","termid":"PBO:0039817"}


id: PBO:0080030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 16, pseudogene","termid":"PBO:0080030"}


id: PR:Q9USS9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dni2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USS9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed minus-nitrogen induction protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.01","synonyms":[{"name":"Spom972h-dni2","type":"exact"}],"termid":"PR:Q9USS9"}


id: PBO:0117131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNB2 antisense RNA 1","termid":"PBO:0117131"}


id: MONDO:0008498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strabismus, susceptibility to","secondary_identifiers":["UMLS:C1861449","MEDGEN:350026","OMIM:185100"],"synonyms":[{"name":"strabismus, susceptibility to","type":"exact"},{"name":"strabismus, susceptibility to, 1","type":"related"}],"termid":"MONDO:0008498","xrefs":{"Monarch":{"xref_id":"0008498"}}}


id: PBO:0072035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 5","termid":"PBO:0072035"}


id: GO:0039656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the normal execution of host gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host gene expression","synonyms":[{"name":"modulation by virus of host gene expression","type":"narrow"},{"name":"regulation by virus of host gene expression","type":"related"}],"termid":"GO:0039656"}


id: MONDO:0019696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of extremely rare, inherited, progressive skeletal conditions that result in a particular form of short stature, called short-limb dwarfism. The short stature is the result of unusually short forearms and forelegs (mesomelia) and abnormal shortening of the bones in the hands and feet (acromelia). At birth, the hands and feet may appear abnormally short and broad. Over time, the apparent disproportion becomes even more obvious, especially during the first years of life. Additional features may include: limited extension of the elbows and arms; progressive abnormal curvature of the spine; an enlarged head; and a slightly flattened midface. Acromesomelic dysplasia is inherited as an autosomal recessive trait. There are different types of acromesomelic dysplasia, which are distinguished by their genetic cause. To read more about the different types, click on the links below. Acromesomelic dysplasia, Maroteaux type Acromesomelic dysplasia, Hunter-Thompson type Acromesomelic dysplasia, Grebe type","definition_xrefs":["GARD:0000006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acromesomelic dysplasia","secondary_identifiers":["icd11.foundation:2002361676","NORD:724","MESH:C535658","GARD:6","Orphanet:93437","UMLS:C5235036","DOID:0080049","MEDGEN:1710812","OMIMPS:602875"],"synonyms":[{"name":"acromesomelic dwarfism","type":"related"}],"termid":"MONDO:0019696","xrefs":{"Monarch":{"xref_id":"0019696"}}}


