# terms

id: GO:0061436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the epithelial barrier, the functional barrier in the skin that limits its permeability.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin epidermis development","termid":"GO:0098773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of skin barrier","synonyms":[{"name":"epithelial barrier development","type":"related"},{"name":"establishment of epithelial barrier","type":"broad"},{"name":"skin barrier development","type":"related"}],"termid":"GO:0061436"}


id: PBO:0011097
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HXK2","termid":"PBO:0011097"}


id: PBO:0079628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Q1","termid":"PBO:0079628"}


id: PBO:0058224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4514","termid":"PBO:0058224"}


id: PBO:0004511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Apl1 (predicted)","termid":"PBO:0004511"}


id: GO:0015416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + phosphonate(out) = ADP + phosphate + phosphonate(in). A phosphonate is any salt, anion, or ester of phosphonic acid (HPO(OH)2).","definition_xrefs":["RHEA:18065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type phosphonate transporter activity","secondary_identifiers":["GO:0042917","GO:0102017","EC:7.3.2.2","MetaCyc:3.6.3.28-RXN","GO:0015604"],"synonyms":[{"name":"ATP phosphohydrolase (phosphonate-transporting)","type":"related"},{"name":"ATPase-coupled alkylphosphonate transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled organic phosphonate transmembrane transporter activity","type":"related"},{"name":"alkylphosphonate ABC transporter activity","type":"narrow"},{"name":"alkylphosphonate transmembrane transporter activity","type":"narrow"},{"name":"alkylphosphonate transmembrane-transporting ATPase activity","type":"narrow"},{"name":"organic phosphonate transmembrane transporter activity","type":"broad"},{"name":"organic phosphonate transmembrane-transporting ATPase activity","type":"related"},{"name":"phosphonate ABC transporter","type":"exact"},{"name":"phosphonate transporting ATPase activity","type":"related"},{"name":"phosphonate-transporting ATPase activity","type":"related"}],"termid":"GO:0015416"}


id: PBO:0014617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside triphosphatase Ham1 (predicted)","termid":"PBO:0014617"}


id: PBO:0008485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A-type phosphatase inhibitor Sds23/Moc1","termid":"PBO:0008485"}


id: GO:0003979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 NAD+ + UDP-alpha-D-glucose = 3 H+ + 2 NADH + UDP-alpha-D-glucuronate.","definition_xrefs":["EC:1.1.1.22","RHEA:23596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"UDP-glucose 6-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00286","MetaCyc:UGD-RXN","Reactome:R-HSA-173597"],"termid":"GO:0003979"}


id: GO:0061889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of astrocyte activation.","definition_xrefs":["PMID:20005821","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of astrocyte differentiation","termid":"GO:0048712"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"is_a","term_name":"regulation of astrocyte activation","termid":"GO:0061888"},{"relation_name":"is_a","term_name":"negative regulation of neuroinflammatory response","termid":"GO:0150079"},{"relation_name":"negatively_regulates","term_name":"astrocyte activation","termid":"GO:0048143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of astrocyte activation","termid":"GO:0061889"}


id: PBO:0061773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF","termid":"PBO:0061773"}


id: GO:0048688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sprouting of an injured axon.","definition_xrefs":["GOC:dgh","GOC:lm","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of axon regeneration","termid":"GO:0048681"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"negatively_regulates","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sprouting of injured axon","synonyms":[{"name":"down regulation of sprouting of injured axon","type":"exact"},{"name":"down-regulation of sprouting of injured axon","type":"exact"},{"name":"downregulation of sprouting of injured axon","type":"exact"},{"name":"inhibition of sprouting of injured axon","type":"narrow"}],"termid":"GO:0048688"}


id: PBO:0053638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 685","termid":"PBO:0053638"}


id: PBO:0051532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 3","termid":"PBO:0051532"}


id: MONDO:0023157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibular hypoplasia scapulo pelvic dysplasia absent","termid":"MONDO:0023157","xrefs":{"Monarch":{"xref_id":"0023157"}}}


id: PBO:0048056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 5","termid":"PBO:0048056"}


id: PBO:0068555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 6, pseudogene","termid":"PBO:0068555"}


id: PBO:0078639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 13","termid":"PBO:0078639"}


id: GO:0039020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pronephric nephron tubule over time, from its formation to the mature structure. The pronephric nephron tubule is an epithelial tube that is part of the pronephric nephron and connects the filtration unit (glomerulus or glomus) of the pronephros to the pronephric duct.","definition_xrefs":["PMID:9268568","GOC:mtg_kidney_jan10","PMID:19909807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron tubule development","termid":"GO:0039020"}


id: PBO:0085220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase with autoacylation activity; likely functions in pathway(s) outside Ras; member of a family of putative palmitoyltransferases containing an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain","termid":"PBO:0085220"}


id: GO:1990207
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex capable of transporting positively charged hydrophobic drugs across the plasma membrane thereby involved in conferring resistance to a wide range of toxic compounds (e.g. methyl viologen, ethidium bromide and acriflavine). It is commonly found in bacteria. In E. coli it forms a homodimer.","definition_xrefs":["PMID:18024586","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"EmrE multidrug transporter complex","synonyms":[{"name":"EmrE complex","type":"narrow"}],"termid":"GO:1990207"}


id: PBO:0083276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; deletion mutation blocks replication of Brome mosaic virus in S. cerevisiae, but this is likely due to effects on the overlapping gene SCS2","termid":"PBO:0083276"}


id: PR:Q9HDV6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mor2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDV6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein mor2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.04c","synonyms":[{"name":"Spom972h-mor2","type":"exact"},{"name":"morphological round protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV6"}


id: PBO:0005485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf11","termid":"PBO:0005485"}


id: PBO:0043546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL1A2 antisense RNA 1","termid":"PBO:0043546"}


id: GO:1990644
data:
  {"annotated_genes":["SJAG_00646","SJAG_00207"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87768,111433],"is_not":false,"summary":null,"term":"GO:1990644"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that attaches the spindle microtubules to the kinetochore.","definition_xrefs":["PMID:20723757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"microtubule site clamp","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990644","terms_by_termid":{"GO:1990644":null}}


id: GO:0050893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural process required for an organism to sense and interpret the dimensions of a sensory experience: modality, location, intensity and affect.","definition_xrefs":["ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cognition","termid":"GO:0050890"},{"relation_name":"part_of","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory processing","termid":"GO:0050893"}


id: GO:1990071
data:
  {"annotated_genes":["SJAG_04837","SJAG_02750","SJAG_02655","SJAG_03467","SJAG_04021","SJAG_04358","SJAG_03663","SJAG_01415","SJAG_04618","SJAG_02525"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71194,74864,88422,89105,97062,98863,99520,102279,103125,109572],"is_not":false,"summary":null,"term":"GO:1990071"}]},"cv_name":"cellular_component","definition":"A complex that mediates intra-Golgi traffic, Golgi exit, endosome-to-Golgi traffic, and the trafficking of autophagy proteins from Golgi to the phagophore assembly site. Binds to a component of the COPI coat. In yeast it includes the following subunits: Bet3 (as homodimer), Bet5, Tca17, Trs20, Trs23, Trs31, Trs33, Trs65, Trs120, Trs130. The whole complex is thought to dimerize with itself.","definition_xrefs":["PMID:22669257","GOC:bhm","PMID:20375281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRAPP complex","termid":"GO:0030008"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_04021":null,"SJAG_04358":null,"SJAG_04618":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005768","GO:0005794","GO:0032991","GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"TRAPPII protein complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990071","terms_by_termid":{"GO:1990071":null}}


id: GO:0075062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont invasive hypha formation within host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invasive hypha growth (obsolete GO:0075062)","synonyms":[{"name":"regulation of symbiont invasive hypha formation in host","type":"exact"},{"name":"regulation of symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0075062"}


id: GO:0106361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-beta-L-rhamnose + L-arginyl-[protein] = dTDP + H+ + N(omega)-(L-rhamnosyl)-L-arginyl-[protein].","definition_xrefs":["PMID:25686373","GOC:sp","PMID:26060278","RHEA:66692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-arginine rhamnosyltransferase activity","termid":"GO:0106361"}


id: PBO:0090887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic serine-tRNA ligase Srs1","termid":"PBO:0090887"}


id: SO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a transcript that is edited.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding_gene","termid":"SO:0001217"},{"relation_name":"transcribed_to","term_name":"edited_transcript","termid":"SO:0000873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_edited_transcript","synonyms":[{"name":"gene with edited transcript","type":"exact"}],"termid":"SO:0000548"}


id: PBO:0046065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K","termid":"PBO:0046065"}


id: PBO:0039745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L domain containing 1","termid":"PBO:0039745"}


id: PBO:0000315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lipid phosphatase (predicted)","termid":"PBO:0000315"}


id: PR:O74878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04195","PANTHER:PTHR12526:SF23","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.08","secondary_identifiers":["UniProtKB:O74878"],"synonyms":[{"name":"Spom972h-ALG11","type":"exact"},{"name":"alpha-1,2-mannosyltransferase alg11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"asparagine-linked glycosylation protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"galactomannan deficiency protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycolipid 2-alpha-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74878"}


id: GO:0021973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed to cross the midline to the contralateral side.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","PMID:9878731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon midline choice point recognition","termid":"GO:0016199"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon decussation","termid":"GO:0021973"}


id: GO:0031972
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of a chloroplast envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid intermembrane space","termid":"GO:0009529"},{"relation_name":"part_of","term_name":"chloroplast envelope","termid":"GO:0009941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast intermembrane space","synonyms":[{"name":"chloroplast envelope lumen","type":"exact"}],"termid":"GO:0031972"}


id: PBO:0055558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2994","termid":"PBO:0055558"}


id: GO:0015961
data:
  {"annotated_genes":["SJAG_04870","SJAG_04939","SJAG_04169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"},{"annotations":[78971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"},{"annotations":[111197,116830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diadenosine polyphosphate, a derivative of the nucleoside adenosine with phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04169":null,"SJAG_04870":null,"SJAG_04939":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diadenosine polyphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine polyphosphate breakdown","type":"exact"},{"name":"diadenosine polyphosphate catabolism","type":"exact"},{"name":"diadenosine polyphosphate degradation","type":"exact"}],"termid":"GO:0015961","terms_by_termid":{"GO:0015964":null,"GO:1901907":null,"GO:1901909":null}}


id: GO:0032159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A faint structure formed of septins found at the leading edge of growth in germ tubes and hyphae in fungal cells growing filamentously. This cap of septins colocalizes with a region of the plasma membrane that is rich in ergosterol.","definition_xrefs":["GOC:krc","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin cap","termid":"GO:0032159"}


id: PBO:0067427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 546, pseudogene","termid":"PBO:0067427"}


id: PBO:0053399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 328-2, pseudogene","termid":"PBO:0053399"}


id: PR:P36584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl302 gene.","definition_xrefs":["UniProtKB:P36584","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L3-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.06c","synonyms":[{"name":"Spom972h-rpl302","type":"exact"}],"termid":"PR:P36584"}


id: GO:0070144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling arginine to arginyl-tRNA in a mitochondrion, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginyl-tRNA aminoacylation","termid":"GO:0006420"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140053","GO:0006399","GO:0008150","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"mitochondrial arginyl-tRNA aminoacylation","termid":"GO:0070144"}


id: GO:0061487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which DNA-dependent DNA replication is started at a late origin of replication. A late origin of replication refers to an origin that is activated late in S phase.","definition_xrefs":["PMID:19221029","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication initiation from late origin (obsolete GO:0061487)","synonyms":[{"name":"late replication origin firing","type":"exact"}],"termid":"GO:0061487"}


id: GO:0061902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of 1-phosphatidylinositol-3-kinase activity.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:18723082"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of 1-phosphatidylinositol-3-kinase activity (obsolete GO:0061902)","termid":"GO:0061902"}


id: PBO:0017857
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of maltose to glucose is 14.5 (uM min-1 ml-2)","termid":"PBO:0017857"}


id: _global:precedes
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precedes","secondary_identifiers":["BFO:0000063"],"termid":"_global:precedes"}


id: GO:0015040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An electron transfer flavoprotein that functions as a housekeeping protein that links acyl-CoA dehydrogenase reactions with the respiratory chain, such as in the fatty acid degradation pathway.","definition_xrefs":["PMID:8599534"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer flavoprotein, group I (obsolete GO:0015040)","synonyms":[{"name":"electron transfer flavoprotein, group I","type":"exact"}],"termid":"GO:0015040"}


id: MONDO:0004796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the meninges of the brain and/or spinal cord caused by an infectious agent (viral, bacterial, or fungal). Symptoms include headache, fever, vomiting, neck stiffness, photophobia, confusion, and seizures.","definition_xrefs":["NCIT:C79598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningitis","termid":"MONDO:0021108"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious meningitis","secondary_identifiers":["ICD9:322.9","SCTID:312216007","EFO:0000584","DOID:9471","ICD9:322","MEDGEN:152668","UMLS:C0729584","ICD9:321.8","HP:0001287"],"synonyms":[{"name":"infectious meningitis","type":"exact"},{"name":"infective meningitis","type":"exact"},{"name":"meningitis","type":"related"}],"termid":"MONDO:0004796","xrefs":{"Monarch":{"xref_id":"0004796"}}}


id: PBO:0085970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potentially phosphorylated by Cdc28p; YER158C has a paralog, AFR1, that arose from the whole genome duplication","termid":"PBO:0085970"}


id: PBO:0043554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 3 chain","termid":"PBO:0043554"}


id: GO:0003911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + nicotinamide nucleotide + deoxyribonucleotide(n+m).","definition_xrefs":["EC:6.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA ligase activity","termid":"GO:0003909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA ligase (NAD+) activity","secondary_identifiers":["MetaCyc:DNA-LIGASE-NAD+-RXN"],"synonyms":[{"name":"DNA joinase activity","type":"broad"},{"name":"DNA ligase (NAD)","type":"related"},{"name":"DNA repair enzyme activity","type":"related"},{"name":"DNA-joining enzyme","type":"related"},{"name":"deoxyribonucleate ligase","type":"broad"},{"name":"deoxyribonucleic acid joinase","type":"broad"},{"name":"deoxyribonucleic acid ligase","type":"broad"},{"name":"deoxyribonucleic joinase","type":"broad"},{"name":"deoxyribonucleic ligase","type":"broad"},{"name":"deoxyribonucleic repair enzyme","type":"related"},{"name":"deoxyribonucleic-joining enzyme","type":"related"},{"name":"poly(deoxyribonucleotide):poly(deoxyribonucleotide) ligase (AMP-forming, NMN-forming)","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD(+)) activity","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD)","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD+) activity","type":"related"},{"name":"polynucleotide ligase","type":"broad"},{"name":"polynucleotide ligase (NAD(+)) activity","type":"related"},{"name":"polynucleotide ligase (NAD)","type":"related"},{"name":"polynucleotide ligase (NAD+) activity","type":"related"},{"name":"polynucleotide ligase (nicotinamide adenine dinucleotide)","type":"related"},{"name":"polynucleotide synthetase (nicotinamide adenine dinucleotide)","type":"related"},{"name":"polynucleotide synthetase activity","type":"related"}],"termid":"GO:0003911"}


id: GO:0010570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which a multicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["GOC:tb","GOC:jp","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"regulates","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth","termid":"GO:0010570"}


id: PBO:0015683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eighteen interacting centromere protein Eic1","termid":"PBO:0015683"}


id: PBO:0004600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin exportin T Los1 (predicted)","termid":"PBO:0004600"}


id: GO:0030459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK (mating sensu Fungi) (obsolete GO:0030459)","synonyms":[{"name":"inactivation of MAPK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030459"}


id: MONDO:0018036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency due to absence of thymus (obsolete MONDO:0018036)","secondary_identifiers":["Orphanet:331220"],"termid":"MONDO:0018036","xrefs":{"Monarch":{"xref_id":"0018036"}}}


id: MONDO:0004798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sheehan syndrome (obsolete MONDO:0004798)","termid":"MONDO:0004798","xrefs":{"Monarch":{"xref_id":"0004798"}}}


id: GO:0031761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a fMet-Leu-Phe receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"fMet-Leu-Phe receptor binding","synonyms":[{"name":"N-formyl peptide receptor binding","type":"exact"},{"name":"fMet-Leu-Phe receptor ligand","type":"narrow"}],"termid":"GO:0031761"}


id: PBO:0071213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 54","termid":"PBO:0071213"}


id: MONDO:0016940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 3p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 3. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 3p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Chromosome 3p duplication can be de novo or inherited from a parent with a balanced translocation. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 3","termid":"MONDO:0016923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 3","secondary_identifiers":["MESH:C536811","UMLS:C5679720","GARD:5343","MEDGEN:1826042","icd11.foundation:514472294","Orphanet:262707"],"synonyms":[{"name":"3p duplication","type":"related"},{"name":"3p trisomy","type":"related"},{"name":"Duplication 3p","type":"related"},{"name":"chromosome 3p duplication","type":"related"},{"name":"partial duplication of chromosome 3p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 3","type":"exact"},{"name":"partial trisomy 3p","type":"related"},{"name":"partial trisomy of chromosome 3p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 3","type":"exact"},{"name":"trisomy 3p","type":"related"}],"termid":"MONDO:0016940","xrefs":{"Monarch":{"xref_id":"0016940"}}}


id: GO:1905868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 3'-UTR-mediated mRNA stabilization.","definition_xrefs":["GOC:TermGenie","PMID:19737525","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"regulates","term_name":"3'-UTR-mediated mRNA stabilization","termid":"GO:0070935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of 3'-UTR-mediated mRNA stabilization","synonyms":[{"name":"regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:1905868"}


id: SO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region recognized by a recombinase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_signal_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_Signal_Sequences"],"synonyms":[{"name":"recombination signal sequence","type":"related"}],"termid":"SO:0001532"}


id: MONDO:0012720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"PSAP-related sphingolipidosis","termid":"MONDO:0100517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"Krabbe disease due to saposin A deficiency","secondary_identifiers":["MEDGEN:392873","GARD:10289","MESH:C567097","OMIM:611722","UMLS:C2673266"],"synonyms":[{"name":"Krabbe disease, atypical","type":"exact"},{"name":"Krabbe disease, atypical due to saposin A deficiency","type":"exact"},{"name":"Krabbe disease, atypical, due to saposin A deficiency","type":"exact"},{"name":"saposin A deficiency","type":"related"}],"termid":"MONDO:0012720","xrefs":{"Monarch":{"xref_id":"0012720"}}}


id: PBO:0004557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide release factor (predicted)","termid":"PBO:0004557"}


id: MONDO:0005381
data:
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id: GO:0015759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Beta-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in a beta configuration.","definition_xrefs":["ISBN:0198506732","PMID:6756954","PMID:3034860","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"beta-glucoside transport","termid":"GO:0015759"}


id: GO:0016760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).","definition_xrefs":["EC:2.4.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase activity","termid":"GO:0016759"},{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cellulose synthase (UDP-forming) activity","secondary_identifiers":["MetaCyc:CELLULOSE-SYNTHASE-UDP-FORMING-RXN","RHEA:19929"],"synonyms":[{"name":"1,4-beta-D-glucan synthase activity","type":"related"},{"name":"1,4-beta-glucan synthase activity","type":"related"},{"name":"GS-I","type":"related"},{"name":"UDP-glucose-1,4-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-cellulose glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDPglucose-cellulose glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,4-beta-D-glucan 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"beta-1,4-glucan synthase activity","type":"related"},{"name":"beta-1,4-glucan synthetase activity","type":"related"},{"name":"beta-1,4-glucosyltransferase activity","type":"related"},{"name":"beta-glucan synthase activity","type":"related"},{"name":"glucan synthase activity","type":"related"},{"name":"uridine diphosphoglucose-1,4-beta-glucan glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-cellulose glucosyltransferase activity","type":"related"}],"termid":"GO:0016760"}


id: GO:0070051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to fibrinogen, a highly soluble hexameric glycoprotein complex that is found in blood plasma and is converted to fibrin by thrombin in the coagulation cascade.","definition_xrefs":["GOC:vk","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"fibrinogen binding","termid":"GO:0070051"}


id: GO:0006208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"},{"relation_name":"is_a","term_name":"nucleobase catabolic process","termid":"GO:0046113"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleobase catabolic process","synonyms":[{"name":"pyrimidine base breakdown","type":"exact"},{"name":"pyrimidine base catabolic process","type":"exact"},{"name":"pyrimidine base catabolism","type":"exact"},{"name":"pyrimidine base degradation","type":"exact"}],"termid":"GO:0006208"}


id: PR:Q9US46
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase RNF14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase itt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.14","secondary_identifiers":["UniProtKB:Q9US46"],"synonyms":[{"name":"RING finger protein itt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNF14","type":"exact"}],"termid":"PR:Q9US46"}


id: GO:0010868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of triglyceride biosynthesis. Triglyceride biosynthesis is the collection of chemical reactions and pathways resulting in the formation of triglyceride, any triester of glycerol.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of triglyceride biosynthetic process","termid":"GO:0010866"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of triglyceride metabolic process","termid":"GO:0090209"},{"relation_name":"negatively_regulates","term_name":"triglyceride biosynthetic process","termid":"GO:0019432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of triglyceride biosynthetic process","synonyms":[{"name":"negative regulation of triacylglycerol biosynthetic process","type":"exact"}],"termid":"GO:0010868"}


id: PR:P21534
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22888:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.11","secondary_identifiers":["UniProtKB:P21534"],"synonyms":[{"name":"SPMIT.11","type":"related"},{"name":"Spom972h-MT-CO2","type":"exact"},{"name":"cytochrome c oxidase polypeptide II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P21534"}


id: MONDO:0005260
data:
  {"annotated_genes":["SJAG_02279"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86848],"is_not":false,"summary":null,"term":"MONDO:0005260"}]},"cv_name":"mondo","definition":"Persistent deficits in social interaction and communication and interaction as well as a markedly restricted repertoire of activity and interest as well as repetitive patterns of behavior.","definition_xrefs":["PMID:28879490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autism spectrum disorder","termid":"MONDO:0005258"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02279":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"autism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0000717","UMLS:C0004352","MEDGEN:13966","NCIT:C97161","MESH:D001321","OMIM:209850","ICD9:299.0","DOID:12849","EFO:0003758"],"synonyms":[{"name":"Kanner's syndrome","type":"exact"},{"name":"autism","type":"exact"},{"name":"autism (disease)","type":"exact"},{"name":"autism spectrum disorder","type":"broad"},{"name":"autism, susceptiblity to","type":"narrow"},{"name":"autistic disorder","type":"related"},{"name":"autistic disorder of childhood onset","type":"exact"},{"name":"childhood autism","type":"exact"},{"name":"infantile autism","type":"exact"}],"termid":"MONDO:0005260","terms_by_termid":{"MONDO:0005260":null},"xrefs":{"Monarch":{"xref_id":"0005260"}}}


id: MOD:00511
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, HexNAc(2)","definition_xrefs":["Unimod:143","PubMed:111247","PubMed:1694179","PubMed:5490222","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)","type":"related"},{"name":"HexNAc2","type":"related"}],"termid":"MOD:00511"}


id: MONDO:0007443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital unilateral hypoplasia of depressor anguli oris is a congenital anomaly, characterized by the unilateral hypoplasia/agenesis of the depressor anguli oris muscle, resulting in an asymmetric crying facies in neonatal period/ infancy (drooping of one corner of the mouth during crying) while eye closure, nasolabial fold and forehead wrinkling are symmetric. While it can be isolated, this anomaly is also seen in 22q11.2 deletion syndrome and can be accompanied by other major congenital anomalies of the cardiovascular system, as well as less frequently the musculoskeletal, cervicofacial, respiratory, genitourinary, and, rarely, endocrine systems. When isolated, the condition is cosmetically insignificant as the infant gets older (as the muscle does not contribute significantly to facial expression in childhood/ adulthood).","definition_xrefs":["Orphanet:1166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"22q11.2 deletion syndrome","termid":"MONDO:0018923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267","MONDO:0002320"],"is_obsolete":false,"name":"congenital unilateral hypoplasia of depressor anguli oris","secondary_identifiers":["ICD9:759.89","SCTID:51409009","GARD:16557","MEDGEN:140911","OMIM:125520","UMLS:C0431406"],"synonyms":[{"name":"Cayler cardiofacial syndrome","type":"related"},{"name":"asymmetric crying facies","type":"related"},{"name":"depressor anguli oris muscle, hypoplasia of","type":"related"},{"name":"facial paresis, partial, unilateral","type":"related"},{"name":"isolated asymmetric crying facies","type":"exact"}],"termid":"MONDO:0007443","xrefs":{"Monarch":{"xref_id":"0007443"}}}


id: PBO:0080048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 21","termid":"PBO:0080048"}


id: PBO:0077001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 3","termid":"PBO:0077001"}


id: MONDO:0013568
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87076,87077],"is_not":false,"summary":null,"term":"MONDO:0013568"}]},"cv_name":"mondo","definition":"Any familial sick sinus syndrome in which the cause of the disease is a mutation in the MYH6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"sick sinus syndrome 3, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3279791","OMIM:614090","MEDGEN:481421"],"synonyms":[{"name":"MYH6 familial sick sinus syndrome","type":"exact"},{"name":"SSS3","type":"related"},{"name":"familial sick sinus syndrome caused by mutation in MYH6","type":"exact"},{"name":"sick sinus syndrome 3","type":"exact"},{"name":"sick sinus syndrome 3, susceptibility to","type":"exact"},{"name":"susceptibility to sick sinus syndrome 3","type":"related"}],"termid":"MONDO:0013568","terms_by_termid":{"MONDO:0013568":null},"xrefs":{"Monarch":{"xref_id":"0013568"}}}


id: PBO:0054462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1859","termid":"PBO:0054462"}


id: GO:0018757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deisopropylhydroxyatrazine + H2O = NH3 + 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine.","definition_xrefs":["UM-BBD_reactionID:r0121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"deisopropylhydroxyatrazine aminohydrolase activity","secondary_identifiers":["KEGG_REACTION:R05574"],"termid":"GO:0018757"}


id: PBO:0063431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 5","termid":"PBO:0063431"}


id: PBO:0083632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain-containing protein involved in endocytosis; actin cytoskeletal organization and cell wall morphogenesis; forms a complex with Sla1p and Pan1p","termid":"PBO:0083632"}


id: PBO:0048495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR55 cis regulatory suppressor of immune response RNA","termid":"PBO:0048495"}


id: GO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of the DSCAM-based immune receptors of insects.","definition_xrefs":["GOC:add","PMID:16261174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of DSCAM-based immune receptors","termid":"GO:0002201"}


id: MONDO:0013799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete efavirenz, poor metabolism of (obsolete MONDO:0013799)","secondary_identifiers":["OMIM:614546"],"synonyms":[{"name":"efavirenz central nervous system toxicity, susceptibility to","type":"related"},{"name":"efavirenz, poor metabolism of","type":"exact"}],"termid":"MONDO:0013799","xrefs":{"Monarch":{"xref_id":"0013799"}}}


id: FYPO:0006056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the spindle pole body does not attach to the prospore membrane during prospore membrane formation and closure. Normally, the prospore membrane associates with the spindle pole body from late anaphase of meiosis II until the membrane has completely closed.","definition_xrefs":["PMID:18411246","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore formation","termid":"FYPO:0000196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"prospore formation with spindle pole body dissociated from prospore membrane","synonyms":[{"name":"forespore formation with spindle pole body dissociated from FSM","type":"exact"},{"name":"forespore formation with spindle pole body dissociated from forespore membrane","type":"exact"},{"name":"prospore formation with SPB dissociated from prospore membrane","type":"exact"},{"name":"spindle pole body separated from the FSM","type":"exact"}],"termid":"FYPO:0006056"}


id: PBO:0046277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EQTN MOB3B IFNK C9orf72 enhancer RNA I","termid":"PBO:0046277"}


id: GO:0089714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-alpha-D-mannosamine + 2 NAD+ + H2O = UDP-N-acetyl-alpha-D-mannosaminuronate + 2 NADH + 2 H+.","definition_xrefs":["EC:1.1.1.336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"UDP-N-acetyl-D-mannosamine dehydrogenase activity","secondary_identifiers":["RHEA:25780"],"termid":"GO:0089714"}


id: MONDO:0007774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal response to a stimulus applied to the sensory components of the nervous system. This may take the form of increased, decreased, or absent reflexes.","definition_xrefs":["MESH:D012021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperreflexia","secondary_identifiers":["MEDGEN:57738","UMLS:C0151889","OMIM:145290","HP:0001347","icd11.foundation:514864448"],"synonyms":[{"name":"HRX","type":"related"},{"name":"hyperreflexia","type":"exact"},{"name":"hyperreflexia (disease)","type":"exact"}],"termid":"MONDO:0007774","xrefs":{"Monarch":{"xref_id":"0007774"}}}


id: GO:0071404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low-density lipoprotein particle stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipoprotein particle","termid":"GO:0055094"},{"relation_name":"is_a","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to low-density lipoprotein particle stimulus","secondary_identifiers":["GO:0055098"],"synonyms":[{"name":"response to low density lipoprotein particle","type":"broad"},{"name":"response to low-density lipoprotein particle","type":"broad"},{"name":"response to low-density lipoprotein particle stimulus","type":"broad"}],"termid":"GO:0071404"}


id: SO:0000112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo to which new deoxyribonucleotides can be added by DNA polymerase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_oligo","termid":"SO:0000441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primer","secondary_identifiers":["http://en.wikipedia.org/wiki/Primer_(molecular_biology)"],"synonyms":[{"name":"DNA primer","type":"exact"},{"name":"primer oligonucleotide","type":"exact"},{"name":"primer polynucleotide","type":"exact"},{"name":"primer sequence","type":"exact"}],"termid":"SO:0000112"}


id: MONDO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A speech disorder characterized by frequent sound or syllable repetitions, sound prolongations, or other dysfluencies that are inappropriate for the individual's age.","definition_xrefs":["NCIT:C35043"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"articulation disorder","termid":"MONDO:0002903"},{"relation_name":"is_a","term_name":"speech disorder","termid":"MONDO:0004730"},{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stutter disorder","secondary_identifiers":["UMLS:C0038131","OMIMPS:184450","DOID:0060243","MEDGEN:20932"],"synonyms":[{"name":"familial persistent stuttering","type":"narrow"},{"name":"stammering","type":"exact"},{"name":"stutter","type":"exact"},{"name":"stuttering","type":"exact"},{"name":"stuttering, familial persistent","type":"narrow"}],"termid":"MONDO:0000723","xrefs":{"Monarch":{"xref_id":"0000723"}}}


id: PBO:0071753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1","termid":"PBO:0071753"}


id: PBO:0030504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_bortezomib","termid":"PBO:0030504"}


id: GO:0050765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phagocytosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"negatively_regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of phagocytosis","synonyms":[{"name":"down regulation of phagocytosis","type":"exact"},{"name":"down-regulation of phagocytosis","type":"exact"},{"name":"downregulation of phagocytosis","type":"exact"},{"name":"inhibition of phagocytosis","type":"narrow"}],"termid":"GO:0050765"}


id: GO:0000182
data:
  {"annotated_genes":["SJAG_05253","SJAG_04766","SJAG_04527","SJAG_03905","SJAG_00247","SJAG_04855","SJAG_03354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72118,73865,101930,102665],"is_not":false,"summary":null,"term":"GO:0000182"},{"annotations":[114771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043110"},{"annotations":[102035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"},{"annotations":[69576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a DNA sequence encoding a ribosomal RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_03354":null,"SJAG_03905":null,"SJAG_04527":null,"SJAG_04766":null,"SJAG_04855":null,"SJAG_05253":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"rDNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal DNA binding","type":"exact"}],"termid":"GO:0000182","terms_by_termid":{"GO:0000182":null,"GO:0001002":null,"GO:0043110":null,"GO:0110035":null}}


id: PBO:0030397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_pheromone","termid":"PBO:0030397"}


id: PBO:0042061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 124","termid":"PBO:0042061"}


id: GO:1901919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exoribonuclease activity.","definition_xrefs":["PMID:22570495","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclease activity","termid":"GO:0032075"},{"relation_name":"is_a","term_name":"regulation of ribonuclease activity","termid":"GO:0060700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of exoribonuclease activity","synonyms":[{"name":"activation of exoribonuclease activity","type":"narrow"},{"name":"up regulation of exoribonuclease activity","type":"exact"},{"name":"up-regulation of exoribonuclease activity","type":"exact"},{"name":"upregulation of exoribonuclease activity","type":"exact"}],"termid":"GO:1901919"}


id: PBO:0028159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5.8S_rRNA_level","termid":"PBO:0028159"}


id: GO:0072367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lipid transport by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipid transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:0072367)","synonyms":[{"name":"regulation of lipid transport by regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072367"}


id: GO:0015734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of taurine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate transmembrane transport","termid":"GO:0042918"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"taurine transmembrane transport","synonyms":[{"name":"taurine transport","type":"broad"}],"termid":"GO:0015734"}


id: GO:1903413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bile acid stimulus.","definition_xrefs":["PMID:21757002","GO_REF:0000071","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to bile acid","termid":"GO:1903412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bile acid","termid":"GO:1903413"}


id: GO:0019177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydroneopterin triphosphate = dihydroneopterin phosphate + diphosphate.","definition_xrefs":["RHEA:25302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydroneopterin triphosphate pyrophosphohydrolase activity","secondary_identifiers":["EC:3.6.1.67","MetaCyc:H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN"],"termid":"GO:0019177"}


id: MONDO:1010157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperostosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperostosis, non-human animal","secondary_identifiers":["OMIA:000507"],"termid":"MONDO:1010157","xrefs":{"Monarch":{"xref_id":"1010157"}}}


id: PATO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's being covered or partially covered with scales.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaly","synonyms":[{"name":"squamous","type":"related"}],"termid":"PATO:0001804"}


id: PBO:0031635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gene_silencing","termid":"PBO:0031635"}


id: PBO:0030502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_checkpoint","termid":"PBO:0030502"}


id: MONDO:0018861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare mitochondrial disorder characterized by facial dysmorphism similar to that seen in Zellweger syndrome, such as frontal bossing, high forehead, upslanting palpebral fissures, hypoplastic supraorbital ridges, and epicanthal folds, and in addition, pale skin, profound hypotonia, developmental delay, and minor metabolic anomalies. No peroxysomal defects, however, have been reported. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:50812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"Zellweger-like syndrome without peroxisomal anomalies","secondary_identifiers":["SCTID:718880003","UMLS:C4305104","GARD:18841","icd11.foundation:697302760","MEDGEN:930773"],"synonyms":[{"name":"AHN-Lerman-Sagie syndrome","type":"exact"}],"termid":"MONDO:0018861","xrefs":{"Monarch":{"xref_id":"0018861"}}}


id: MONDO:0003852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature teratoma that arises from the ovary and presents as a large solid mass. It contains multiple cysts that vary in size. Small foci of hemorrhage are also present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature ovarian teratoma","termid":"MONDO:0003820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian solid teratoma","secondary_identifiers":["DOID:6315","UMLS:C1335181","MEDGEN:233810","NCIT:C7285"],"termid":"MONDO:0003852","xrefs":{"Monarch":{"xref_id":"0003852"}}}


id: PBO:0069242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 497, pseudogene","termid":"PBO:0069242"}


id: PBO:0016996
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP U2 Auxiliary Factor","termid":"PBO:0016996"}


id: MONDO:0003532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast carcinoma characterized by the formation of irregular, finger-like projections of fibrous stroma covered with neoplastic epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"breast ductal adenocarcinoma","termid":"MONDO:0005590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast papillary carcinoma","secondary_identifiers":["DOID:5592","MEDGEN:818226","NCIT:C9134","UMLS:C3812899"],"synonyms":[{"name":"Papillary breast cancer","type":"exact"},{"name":"breast papillary carcinoma","type":"exact"},{"name":"breast solid papillary carcinoma","type":"narrow"},{"name":"papillary breast carcinoma","type":"exact"},{"name":"papillary carcinoma of breast","type":"exact"},{"name":"papillary carcinoma of the breast","type":"exact"},{"name":"solid papillary carcinoma of the breast","type":"narrow"}],"termid":"MONDO:0003532","xrefs":{"Monarch":{"xref_id":"0003532"}}}


id: MONDO:0035529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic respiratory disease characterized by infantile onset of pulmonary alveolar proteinosis with hypogammaglobulinemia. Patients have normal respiratory function at birth, but subsequently develop recurrent, mainly viral, infections and progressive respiratory failure, often leading to death in infancy or early childhood. Additional reported features include leukocytosis and splenomegaly.","definition_xrefs":["Orphanet:572428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile-onset pulmonary alveolar proteinosis-hypogammaglobulinemia","secondary_identifiers":["GARD:22313","MEDGEN:1810375","UMLS:C5680364"],"synonyms":[{"name":"OAS1 deficiency","type":"exact"},{"name":"OAS1-related infantile-onset pulmonary alveolar proteinosis-hypogammaglobulinemia","type":"exact"}],"termid":"MONDO:0035529","xrefs":{"Monarch":{"xref_id":"0035529"}}}


id: PR:O43000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- liz1 gene.","definition_xrefs":["UniProtKB:O43000","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transporter liz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.01c","synonyms":[{"name":"Spom972h-liz1","type":"exact"}],"termid":"PR:O43000"}


id: GO:0044498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of the force with which blood travels through the circulatory system of the bitten/stung organism.","definition_xrefs":["GOC:jl","PMID:19837656","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation perturbing biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of blood pressure in another organism","synonyms":[{"name":"envenomation resulting in modulation of blood pressure in other organism","type":"exact"},{"name":"envenomation resulting in regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044498"}


id: PBO:0070225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 159 pseudogene","termid":"PBO:0070225"}


id: PATO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction approximating the shape of a circle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circling direction","termid":"PATO:0001904"}


id: PBO:0031683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_peroxisome_degradation","termid":"PBO:0031683"}


id: FYPO:0007270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear chromatin organization is abnormal, such regions containing transposons (Tf2 elements) are tethered to the centromere to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:23084836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"decreased Tf body tethering to centromere","synonyms":[{"name":"decreased Tf body tethering to centromere during mitotic cell cycle","type":"related"},{"name":"decreased Tf body tethering to centromere during vegetative growth","type":"exact"},{"name":"decreased Tf2 body tethering to centromere","type":"exact"},{"name":"decreased centromere tethering of Tf2 bodies","type":"exact"},{"name":"reduced Tf body tethering to centromere","type":"exact"}],"termid":"FYPO:0007270"}


id: GO:0021738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fastigial nucleus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:curators","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fastigial nucleus development","termid":"GO:0021738"}


id: GO:0033431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CGA codon-amino acid adaptor activity","synonyms":[{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033431"}


id: GO:0034000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endolytic cleavage of beta-1,4-galactosaminic bonds between N-acetylgalactosamine and either D-glucuronic acid or L-iduronic acid to produce a mixture of Delta4-unsaturated oligosaccharides of different sizes that are ultimately degraded to Delta4-unsaturated tetra- and disaccharides.","definition_xrefs":["EC:4.2.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"chondroitin-sulfate-ABC endolyase activity","synonyms":[{"name":"ChS ABC lyase I activity","type":"related"},{"name":"ChS ABC lyase activity","type":"broad"},{"name":"chondroitin ABC eliminase activity","type":"broad"},{"name":"chondroitin sulfate ABC endoeliminase activity","type":"related"},{"name":"chondroitin sulfate ABC endolyase activity","type":"related"},{"name":"chondroitin sulfate ABC lyase activity","type":"broad"},{"name":"chondroitinase ABC activity","type":"broad"},{"name":"chondroitinase activity","type":"broad"}],"termid":"GO:0034000"}


id: PBO:0040217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 3B","termid":"PBO:0040217"}


id: PBO:0076874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 26","termid":"PBO:0076874"}


id: PBO:0074937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 103B","termid":"PBO:0074937"}


id: PR:O14124
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3A11.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized dipeptidase C3A11.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.10c","synonyms":[{"name":"Spom972h-SPAC3A11.10c","type":"exact"}],"termid":"PR:O14124"}


id: FYPO:0001971
data:
  {"alleles_by_uniquename":{"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118999],"is_not":false,"summary":null,"term":"FYPO:0001971"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal, and results in the formation of a chain of cells. Cells in the chain visually resemble wild-type cells, except that they remain connected, often via remnants of septum edging material, and may continue to undergo normal mitosis and septum formation.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:8873452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03444":null},"genotype_count":1,"genotypes_by_uniquename":{"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis resulting in chained cells","references_by_uniquename":{"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_03444"],"single_locus_genotype_uniquenames":["agn1delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis resulting in chained cells during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis resulting in chained cells during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation resulting in chained cells","type":"exact"},{"name":"cell clumping","type":"related"},{"name":"clumped cells","type":"related"}],"termid":"FYPO:0001971","terms_by_termid":{"FYPO:0001971":null}}


id: PBO:0068423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl aminopeptidase like 1","termid":"PBO:0068423"}


id: GO:0090734
data:
  {"annotated_genes":["SJAG_04190","SJAG_05012","SJAG_04816","SJAG_03454","SJAG_03026","SJAG_01680","SJAG_02098","SJAG_02079","SJAG_00757","SJAG_02545","SJAG_01076","SJAG_02990","SJAG_02072","SJAG_04183","SJAG_00399","SJAG_00250","SJAG_04791","SJAG_02460","SJAG_03722","SJAG_01486","SJAG_02294","SJAG_02771","SJAG_01832","SJAG_01648","SJAG_03923","SJAG_05372","SJAG_01677","SJAG_02828","SJAG_00640","SJAG_01205","SJAG_04239","SJAG_01605","SJAG_02200","SJAG_01849","SJAG_01410","SJAG_01708","SJAG_01573","SJAG_03941","SJAG_03780","SJAG_03680","SJAG_05295","SJAG_01429","SJAG_01698","SJAG_05373","SJAG_05239","SJAG_02521","SJAG_03855","SJAG_01533","SJAG_03898","SJAG_02575","SJAG_03906","SJAG_00727","SJAG_02616","SJAG_03615","SJAG_01419","SJAG_05196","SJAG_04142","SJAG_05232","SJAG_02708","SJAG_01644"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90047,96878,100338,110570,112260,93428,96268,103079,102648,118451,95928,78618,104177,91298,76946,111294,100368,98720,100806,103905,89350,79060,91191,96908,116944,70896,74049,116537,102568,107499,116255,92438,114024,111470,107409,117039,77743,75016,89963,95763,107543,110966,103808,71460,97178,93701,89049,96671,102706,109065,103975,117460,100400,98949,88919,115991,98813,75054,88390,111253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035861"}]},"cv_name":"cellular_component","definition":"A region of a chromosome at which DNA damage has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00250":null,"SJAG_00399":null,"SJAG_00640":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01429":null,"SJAG_01486":null,"SJAG_01533":null,"SJAG_01573":null,"SJAG_01605":null,"SJAG_01644":null,"SJAG_01648":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01832":null,"SJAG_01849":null,"SJAG_02072":null,"SJAG_02079":null,"SJAG_02098":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02521":null,"SJAG_02545":null,"SJAG_02575":null,"SJAG_02616":null,"SJAG_02708":null,"SJAG_02771":null,"SJAG_02828":null,"SJAG_02990":null,"SJAG_03026":null,"SJAG_03454":null,"SJAG_03615":null,"SJAG_03680":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_03923":null,"SJAG_03941":null,"SJAG_04142":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04239":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_05012":null,"SJAG_05196":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05295":null,"SJAG_05372":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"site of DNA damage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:DNA_repair"],"termid":"GO:0090734","terms_by_termid":{"GO:0035861":null}}


id: PBO:0077864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 5","termid":"PBO:0077864"}


id: PBO:0050500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B13","termid":"PBO:0050500"}


id: MONDO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the parametrium.","direct_ancestors":[{"relation_name":"is_a","term_name":"broad ligament malignant neoplasm","termid":"MONDO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"parametrium malignant neoplasm","secondary_identifiers":["ICD9:183.4","UMLS:C0153581","DOID:11746","SCTID:448674007","MEDGEN:509332"],"synonyms":[{"name":"cancer of parametrium","type":"exact"},{"name":"malignant neoplasm of parametrium","type":"exact"},{"name":"malignant parametrium neoplasm","type":"exact"},{"name":"parametrium cancer","type":"exact"}],"termid":"MONDO:0001350","xrefs":{"Monarch":{"xref_id":"0001350"}}}


id: MOD:01701
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes a hydrogen cation, a proton, forming an anionic residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deprotonated residue","synonyms":[{"name":"H-NRes","type":"exact"}],"termid":"MOD:01701"}


id: FYPO:0004272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore release from an ascus is abnormal.","definition_xrefs":["GO:0071998","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}


id: GO:0031386
data:
  {"annotated_genes":["SJAG_03849","SJAG_02253","SJAG_03616","SJAG_02891","SJAG_01365","SJAG_01226","SJAG_00452","SJAG_06309","SJAG_00615","SJAG_03843","SJAG_03971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70160,70535,71869,72561,75214,75487,75572,79453,80165,90802,90804],"is_not":false,"summary":null,"term":"GO:0031386"}]},"cv_name":"molecular_function","definition":"A molecular function exhibited by a protein that is covalently attached (AKA tagged or conjugated) to another protein where it acts as a marker, recognized by the cellular apparatus to target the tagged protein for some cellular process such as modification, sequestration, transport or degradation.","definition_xrefs":["PMID:6305978","PMID:20054389","GOC:dos","PMID:19028679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular tag activity","termid":"GO:0141047"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00615":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_02253":null,"SJAG_02891":null,"SJAG_03616":null,"SJAG_03843":null,"SJAG_03849":null,"SJAG_03971":null,"SJAG_06309":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein tag activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"covalent modifier","type":"broad"},{"name":"protein tag","type":"exact"},{"name":"protein tagging activity","type":"related"},{"name":"ubiquitin","type":"related"},{"name":"ubiquitin-like protein modifier","type":"exact"}],"termid":"GO:0031386","terms_by_termid":{"GO:0031386":null}}


id: PBO:0091675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional lncRNA of nc-tgp1, non-functional","termid":"PBO:0091675"}


id: GO:1904068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled receptor signaling pathway that is involved in social behavior.","definition_xrefs":["PMID:22665789","GO_REF:0000060","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"social behavior","termid":"GO:0035176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in social behavior","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G protein coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in cooperative behavior","type":"related"},{"name":"G protein coupled receptor protein signalling pathway involved in social behavior","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor protein signal transduction involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor signalling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in social behaviour","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein-coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein-coupled receptor protein signalling pathway involved in social behavior","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in social behaviour","type":"exact"},{"name":"GPCR signaling pathway involved in cooperative behavior","type":"related"},{"name":"GPCR signaling pathway involved in social behavior","type":"exact"},{"name":"GPCR signaling pathway involved in social behaviour","type":"exact"},{"name":"GPCR signalling pathway involved in cooperative behavior","type":"related"},{"name":"GPCR signalling pathway involved in social behavior","type":"exact"},{"name":"GPCR signalling pathway involved in social behaviour","type":"exact"}],"termid":"GO:1904068"}


id: PBO:0080632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 82","termid":"PBO:0080632"}


id: PBO:0005766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Lsp1","termid":"PBO:0005766"}


id: GO:0016941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a natriuretic peptide and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide receptor activity","termid":"GO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"natriuretic peptide receptor activity","termid":"GO:0016941"}


id: GO:0047098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 O2 + donor-H2 + Latia luciferin = light + H2O + acceptor + formate + CO2 + oxidized Latia luciferin.","definition_xrefs":["EC:1.14.99.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"Latia-luciferin monooxygenase (demethylating) activity","secondary_identifiers":["MetaCyc:1.14.99.21-RXN","RHEA:12677"],"synonyms":[{"name":"Latia luciferin monooxygenase (demethylating)","type":"related"},{"name":"Latia-luciferin,hydrogen-donor:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"luciferase (Latia luciferin)","type":"related"}],"termid":"GO:0047098"}


id: PBO:0050611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSD17B3 antisense RNA 1","termid":"PBO:0050611"}


id: FYECO:0000076
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which dihydroxyacetone was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ dihydroxyacetone","synonyms":[{"name":"DHA added","type":"exact"}],"termid":"FYECO:0000076"}


id: GO:1902210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bacterial-type flagellum assembly.","definition_xrefs":["GOC:TermGenie","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"regulation of bacterial-type flagellum assembly","termid":"GO:1902208"},{"relation_name":"positively_regulates","term_name":"bacterial-type flagellum assembly","termid":"GO:0044780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of bacterial-type flagellum assembly","synonyms":[{"name":"activation of bacterial flagellum assembly","type":"narrow"},{"name":"activation of bacterial-type flagellum assembly","type":"narrow"},{"name":"positive regulation of bacterial flagellum assembly","type":"exact"},{"name":"up regulation of bacterial flagellum assembly","type":"exact"},{"name":"up regulation of bacterial-type flagellum assembly","type":"exact"},{"name":"up-regulation of bacterial flagellum assembly","type":"exact"},{"name":"up-regulation of bacterial-type flagellum assembly","type":"exact"},{"name":"upregulation of bacterial flagellum assembly","type":"exact"},{"name":"upregulation of bacterial-type flagellum assembly","type":"exact"}],"termid":"GO:1902210"}


id: PBO:0040230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 2","termid":"PBO:0040230"}


id: FYPO:0003639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall biogenesis is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell wall biogenesis","synonyms":[{"name":"abolished fungal-type cell wall biogenesis","type":"exact"},{"name":"fungal-type cell wall biogenesis abolished","type":"exact"}],"termid":"FYPO:0003639"}


id: GO:1905865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Atg1/ULK1 kinase complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:autophagy","PMID:26567215","GOC:mf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of Atg1/ULK1 kinase complex assembly","termid":"GO:1905864"},{"relation_name":"negatively_regulates","term_name":"Atg1/ULK1 kinase complex assembly","termid":"GO:1904745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"down regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"down regulation of ATG1 kinase complex formation","type":"exact"},{"name":"down regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"down regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"down regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"down regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"down regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"down regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"down regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"down regulation of Atg1p signalling complex formation","type":"exact"},{"name":"down regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"down regulation of ULK1 signaling complex formation","type":"exact"},{"name":"down regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"down regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"down regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"down regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"down-regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"down-regulation of ATG1 kinase complex formation","type":"exact"},{"name":"down-regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"down-regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"down-regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"down-regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"down-regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"down-regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"down-regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"down-regulation of Atg1p signalling complex formation","type":"exact"},{"name":"down-regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"down-regulation of ULK1 signaling complex formation","type":"exact"},{"name":"down-regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"down-regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"down-regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"down-regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"downregulation of ATG1 kinase complex assembly","type":"exact"},{"name":"downregulation of ATG1 kinase complex formation","type":"exact"},{"name":"downregulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"downregulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"downregulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"downregulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"downregulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"downregulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"downregulation of Atg1p signalling complex assembly","type":"exact"},{"name":"downregulation of Atg1p signalling complex formation","type":"exact"},{"name":"downregulation of ULK1 signaling complex assembly","type":"exact"},{"name":"downregulation of ULK1 signaling complex formation","type":"exact"},{"name":"downregulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"downregulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"downregulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"downregulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"inhibition of ATG1 kinase complex assembly","type":"narrow"},{"name":"inhibition of ATG1 kinase complex formation","type":"narrow"},{"name":"inhibition of ATG1-ATG13 complex assembly","type":"narrow"},{"name":"inhibition of ATG1-ATG13 complex formation","type":"narrow"},{"name":"inhibition of ATG1/ULK1 kinase complex assembly","type":"narrow"},{"name":"inhibition of ATG1/ULK1 kinase complex formation","type":"narrow"},{"name":"inhibition of ATG1/ULK1 signaling complex assembly","type":"narrow"},{"name":"inhibition of ATG1/ULK1 signaling complex formation","type":"narrow"},{"name":"inhibition of Atg1p signalling complex assembly","type":"narrow"},{"name":"inhibition of Atg1p signalling complex formation","type":"narrow"},{"name":"inhibition of ULK1 signaling complex assembly","type":"narrow"},{"name":"inhibition of ULK1 signaling complex formation","type":"narrow"},{"name":"inhibition of ULK1-ATG13-FIP200 complex assembly","type":"narrow"},{"name":"inhibition of ULK1-ATG13-FIP200 complex formation","type":"narrow"},{"name":"inhibition of ULK1-ATG13-RB1CC1 complex assembly","type":"narrow"},{"name":"inhibition of ULK1-ATG13-RB1CC1 complex formation","type":"narrow"},{"name":"negative regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"negative regulation of ATG1 kinase complex formation","type":"exact"},{"name":"negative regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"negative regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"negative regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"negative regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"negative regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"negative regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"negative regulation of Atg1p signalling complex formation","type":"exact"},{"name":"negative regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"negative regulation of ULK1 signaling complex formation","type":"exact"},{"name":"negative regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"negative regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"negative regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"negative regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1905865"}


id: PBO:0048981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 4 (gene/pseudogene)","termid":"PBO:0048981"}


id: FYPO:0005679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal after cells have been exposed to hydroxyurea.","definition_xrefs":["PMID:27151298","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein deubiquitination following cellular response to hydroxyurea during vegetative growth","synonyms":[{"name":"decreased protein deubiquitination during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein deubiquitination following cellular response to HU","type":"exact"},{"name":"decreased protein deubiquitination following cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein deubiquitylation following cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein deubiquitination following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005679"}


id: FYPO:0004365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a dioxygenase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal dioxygenase activity","termid":"FYPO:0004364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished dioxygenase activity","synonyms":[{"name":"dioxygenase activity abolished","type":"exact"}],"termid":"FYPO:0004365"}


id: PBO:0072964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCG5 antisense RNA 1","termid":"PBO:0072964"}


id: MONDO:0042600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sammartino-Decreccio syndrome","secondary_identifiers":["UMLS:C2931447","MEDGEN:419806"],"synonyms":[{"name":"Sammartino Decreccio syndrome","type":"related"},{"name":"superficial annular corneal dystrophy, ichthyosis nigrans, microcephaly and mild mental subnormality","type":"related"}],"termid":"MONDO:0042600","xrefs":{"Monarch":{"xref_id":"0042600"}}}


id: PBO:0113211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein, ERMES complex subunit; required for transmission of mitochondria to daughter cells; required for mitophagy; may influence import and assembly of outer membrane beta-barrel proteins; localizes to mitochondria–ER contact sites; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0113211"}


id: PBO:0053088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 1F","termid":"PBO:0053088"}


id: PBO:0076621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBCC domain containing 1","termid":"PBO:0076621"}


id: GO:1904482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetrahydrofolate stimulus.","definition_xrefs":["GOC:BHF","GO_REF:0000071","GOC:hal","GOC:TermGenie","PMID:24698160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to tetrahydrofolate","termid":"GO:1904481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tetrahydrofolate","termid":"GO:1904482"}


id: PBO:0110472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX16 pseudogene 1","termid":"PBO:0110472"}


id: GO:0040036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"regulation of FGF receptor signaling pathway","type":"exact"},{"name":"regulation of FGF receptor signalling pathway","type":"exact"},{"name":"regulation of FGFR signaling pathway","type":"exact"}],"termid":"GO:0040036"}


id: PBO:0072022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 9","termid":"PBO:0072022"}


id: PATO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000784 excretory function value (obsolete PATO:0000784)","termid":"PATO:0000784"}


id: PBO:0090388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, calcineurin responsive Prz1","termid":"PBO:0090388"}


id: MONDO:0008815
data:
  {"annotated_genes":["SJAG_01461"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85343],"is_not":false,"summary":null,"term":"MONDO:0008815"}]},"cv_name":"mondo","definition":"Argininosuccinic aciduria (ASA) is a disorder of urea cycle metabolism most commonly characterized by either a severe, neonatal-onset form that manifests with hyperammonemia accompanied with vomiting, hypothermia, lethargy and poor feeding in the first few days of life, or late-onset forms (any age outside the newborn period) that manifest with stress or infection-induced episodic hyperammonemia or, in some, behavioral abnormalities and/or learning disabilities. Patients often manifest liver dysfunction.","definition_xrefs":["Orphanet:23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"argininosuccinic aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:41013004","UMLS:C0268547","GARD:5843","DOID:14755","MEDGEN:78687","NANDO:2200481","NORD:802","NCIT:C84569","icd11.foundation:439383288","MedDRA:10058299","MESH:D056807","NANDO:1200806","OMIM:207900"],"synonyms":[{"name":"ASA deficiency","type":"exact"},{"name":"ASL deficiency","type":"exact"},{"name":"arginino succinase deficiency","type":"related"},{"name":"argininosuccinase deficiency","type":"exact"},{"name":"argininosuccinate acidemia","type":"related"},{"name":"argininosuccinate lyase deficiency","type":"related"},{"name":"argininosuccinatelyase deficiency","type":"exact"},{"name":"argininosuccinic acid lyase deficiency","type":"exact"},{"name":"argininosuccinic acidemia","type":"exact"},{"name":"argininosuccinic aciduria","type":"exact"},{"name":"argininosuccinicaciduria","type":"related"},{"name":"arginosuccinase deficiency","type":"exact"},{"name":"deficiency of argininosuccinate lyase","type":"exact"},{"name":"inborn error of urea synthesis, arginino succinic type","type":"related"},{"name":"urea cycle disorder, arginino succinase type","type":"related"}],"termid":"MONDO:0008815","terms_by_termid":{"MONDO:0008815":null},"xrefs":{"Monarch":{"xref_id":"0008815"}}}


id: PBO:0071999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 1","termid":"PBO:0071999"}


id: FYPO:0004954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more prospore membrane than normal. Excess prospore membrane may take the form of bubble-like structures continuous with the rest of the membrane.","definition_xrefs":["PMID:17951524","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane","termid":"FYPO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"excess prospore membrane present","synonyms":[{"name":"excess forespore membrane present","type":"exact"},{"name":"forespore membrane bubble formation","type":"related"},{"name":"prospore membrane present in greater amount","type":"exact"}],"termid":"FYPO:0004954"}


id: PBO:0064133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2","termid":"PBO:0064133"}


id: PBO:0040822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 2","termid":"PBO:0040822"}


id: MONDO:1012471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pentalogy of Fallot, non-human animal","termid":"MONDO:1011650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentalogy of Fallot, sheep","secondary_identifiers":["OMIA:001857-9940"],"termid":"MONDO:1012471","xrefs":{"Monarch":{"xref_id":"1012471"}}}


id: PBO:0026975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_in_mitochondrion","termid":"PBO:0026975"}


id: MONDO:0009797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare autosomal recessive inherited disorder caused by mutations in the UMPS gene. It is characterized by deficiency of the activity of the pyrimidine pathway enzyme uridine 5'-monophosphate (UMP) synthase. Clinical manifestations include growth retardation, anemia, and increased excretion of orotic acid in the urine.","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"},{"relation_name":"is_a","term_name":"vitamin B12- and folate-independent constitutional megaloblastic anemia","termid":"MONDO:0020112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0019254","MONDO:0005570"],"is_obsolete":false,"name":"orotic aciduria","secondary_identifiers":["MEDGEN:472940","DOID:0050833","NCIT:C98944","Orphanet:30","UMLS:C0220987","MedDRA:10052621","OMIM:258900","NORD:1942","NANDO:2200590","icd11.foundation:449856959","SCTID:47641009","GARD:5429"],"synonyms":[{"name":"Hereditary Orotic Aciduria","type":"exact"},{"name":"OPRT and ODC deficiency","type":"related"},{"name":"UMP synthtase deficiency","type":"related"},{"name":"UMPS","type":"related"},{"name":"Ump synthase deficiency","type":"related"},{"name":"Umps deficiency","type":"related"},{"name":"hereditary orotic aciduria","type":"related"},{"name":"orotate phosphoribosyltransferase and OMP decarboxylase deficiency","type":"related"},{"name":"orotate phosphoribosyltransferase and orotidylic decarboxylase deficiency","type":"related"},{"name":"orotic aciduria","type":"exact"},{"name":"orotic aciduria 1","type":"related"},{"name":"orotic aciduria II (formerly)","type":"related"},{"name":"orotic aciduria type 1","type":"related"},{"name":"orotic aciduria without megaloblastic Anaemia","type":"related"},{"name":"orotic aciduria without megaloblastic Anemia","type":"related"},{"name":"oroticaciduria","type":"exact"},{"name":"oroticaciduria 1","type":"related"},{"name":"orotidylic decarboxylase deficiency","type":"exact"},{"name":"orotidylic pyrophosphorylase and orotidylic decarboxylase deficiency","type":"related"},{"name":"uridine monophosphate synthase deficiency","type":"related"},{"name":"uridine monophosphate synthetase deficiency","type":"exact"}],"termid":"MONDO:0009797","xrefs":{"Monarch":{"xref_id":"0009797"}}}


id: GO:0002476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"},{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen","termid":"GO:0002483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib","synonyms":[{"name":"endogenous peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002476"}


id: PBO:0074155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E3","termid":"PBO:0074155"}


id: GO:2000375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oxygen metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of oxygen metabolic process","termid":"GO:2000374"},{"relation_name":"negatively_regulates","term_name":"oxygen metabolic process","termid":"GO:0072592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxygen metabolic process","synonyms":[{"name":"negative regulation of diatomic oxygen metabolic process","type":"exact"},{"name":"negative regulation of oxygen metabolism","type":"exact"}],"termid":"GO:2000375"}


id: GO:0019640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-glucuronate into D-xylulose 5-phosphate.","definition_xrefs":["PMID:27189775","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucuronate catabolic process","termid":"GO:0042840"},{"relation_name":"is_a","term_name":"xylulose 5-phosphate biosynthetic process","termid":"GO:1901159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-glucuronate catabolic process to D-xylulose 5-phosphate","secondary_identifiers":["Reactome:R-HSA-5661270"],"synonyms":[{"name":"glucuronate breakdown to xylulose 5-phosphate","type":"exact"},{"name":"glucuronate catabolic process to xylulose 5-phosphate","type":"exact"},{"name":"glucuronate degradation to xylulose 5-phosphate","type":"exact"}],"termid":"GO:0019640"}


id: GO:0047265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: poly(glycerol phosphate) + UDP-D-glucose = alpha-D-glucosylpoly(glycerol phosphate) + UDP.","definition_xrefs":["EC:2.4.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"poly(glycerol-phosphate) alpha-glucosyltransferase activity","secondary_identifiers":["MetaCyc:TEICHOICSYN5-RXN","RHEA:15845"],"synonyms":[{"name":"UDP glucose-poly(glycerol-phosphate) alpha-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:poly(glycerol-phosphate) alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:poly(glycerol-phosphate) alpha-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-poly(glycerol-phosphate) alpha-glucosyltransferase activity","type":"related"}],"termid":"GO:0047265"}


id: PBO:0088051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like modifier involved in autophagy and the Cvt pathway; conserved; conjugated to Atg5p to form a complex involved in Atg8p lipidation; Atg5p-Atg12p conjugate enhances E2 activity of Atg3p by rearranging its catalytic site, also forms a complex with Atg16p; the Atg5-Atg12/Atg16 complex binds to membranes and is essential for autophagosome formation; homolog of mammalian ULK1","termid":"PBO:0088051"}


id: PR:P78937
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua1 gene.","definition_xrefs":["UniProtKB:P78937","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate adenylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.08c","synonyms":[{"name":"ATP-sulfurylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua1","type":"exact"},{"name":"sulfate adenylate transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78937"}


id: PBO:0117089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP5C antisense RNA 1","termid":"PBO:0117089"}


id: GO:1902678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right caudal flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["PMID:16607022","PMID:5961344","ISBN:9780124260207","GOC:giardia","GOC:TermGenie","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right caudal flagellum","termid":"GO:0097561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"right caudal basal body","synonyms":[{"name":"cilial basal body of right caudal cilium","type":"exact"},{"name":"cilial basal body of right caudal flagellum","type":"exact"},{"name":"ciliary basal body of right caudal cilium","type":"exact"},{"name":"ciliary basal body of right caudal flagellum","type":"exact"},{"name":"cilium basal body of right caudal cilium","type":"exact"},{"name":"cilium basal body of right caudal flagellum","type":"exact"},{"name":"microtubule basal body of right caudal cilium","type":"exact"},{"name":"microtubule basal body of right caudal flagellum","type":"exact"},{"name":"right caudal flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902678"}


id: PBO:0057367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aj-1","termid":"PBO:0057367"}


id: PBO:0018194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transmembrane transporter Hmt1","termid":"PBO:0018194"}


id: PBO:0006184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localizes","termid":"PBO:0006184"}


id: MONDO:1011497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, sheep","secondary_identifiers":["OMIA:000327-9940"],"termid":"MONDO:1011497","xrefs":{"Monarch":{"xref_id":"1011497"}}}


id: GO:0016217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deethylsimazine + H2O = N-ethylammeline + chloride + H+.","definition_xrefs":["MetaCyc:R465-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"N-ethylammeline chlorohydrolase activity","termid":"GO:0016217"}


id: GO:0009449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid metabolic process","termid":"GO:0009448"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid biosynthetic process","secondary_identifiers":["Reactome:R-HSA-888568"],"synonyms":[{"name":"4-aminobutanoate biosynthesis","type":"exact"},{"name":"4-aminobutanoate biosynthetic process","type":"exact"},{"name":"4-aminobutyrate biosynthesis","type":"exact"},{"name":"4-aminobutyrate biosynthetic process","type":"exact"},{"name":"GABA biosynthesis","type":"exact"},{"name":"GABA biosynthetic process","type":"exact"},{"name":"gamma-aminobutyric acid anabolism","type":"exact"},{"name":"gamma-aminobutyric acid biosynthesis","type":"exact"},{"name":"gamma-aminobutyric acid formation","type":"exact"},{"name":"gamma-aminobutyric acid synthesis","type":"exact"}],"termid":"GO:0009449"}


id: GO:0060320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition and rejection of self pollen by cells in the stigma, mediated by the sharing and interaction of the single locus incompatibility haplotypes.","definition_xrefs":["PMID:34848142","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recognition of pollen","termid":"GO:0048544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rejection of self pollen","synonyms":[{"name":"self-incompatibility","type":"related"}],"termid":"GO:0060320"}


id: PBO:0060537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase domain containing 1","termid":"PBO:0060537"}


id: PBO:0090952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin-interacting protein, BFC/FNIP-Folliculin complex subunit subunit Fnp1","termid":"PBO:0090952"}


id: GO:0141127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters a Rab protein family-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24251537","PMID:30893609","PMID:30181274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host small GTPase-mediated signal transduction","termid":"GO:0044082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host Rab small GTPase signal transduction","synonyms":[{"name":"modulation by symbiont of host Rab protein mediated signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein-mediated signal transduction","type":"exact"},{"name":"modulation of host Rab protein signal transduction by symbiont","type":"exact"},{"name":"modulation of host Rab protein signaling by symbiont","type":"exact"},{"name":"modulation of host Rab protein signalling by symbiont","type":"exact"},{"name":"perturbation of host Rab protein signal transduction","type":"exact"},{"name":"symbiont-mediated perturbation of host Rab protein signal transduction","type":"exact"}],"termid":"GO:0141127"}


id: GO:0004569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal alpha-glucosyl-(1,3)-mannosyl unit from Glc-Man(9)-(GlcNAc)(2) oligosaccharide component of the glycoprotein produced in the Golgi membrane.","definition_xrefs":["EC:3.2.1.130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glycoprotein endo-alpha-1,2-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.130-RXN","RHEA:54824","Reactome:R-HSA-964759"],"synonyms":[{"name":"endo-alpha-mannosidase activity","type":"related"},{"name":"endomannosidase activity","type":"related"},{"name":"glucosyl mannosidase activity","type":"related"},{"name":"glucosylmannosidase activity","type":"related"},{"name":"glycoprotein glucosylmannohydrolase activity","type":"related"}],"termid":"GO:0004569"}


id: PBO:0079322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 12","termid":"PBO:0079322"}


id: PBO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II heavy chain Myo3","termid":"PBO:0001606"}


id: PBO:0045030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3 like 3'-5' exoribonuclease 2","termid":"PBO:0045030"}


id: PBO:0079640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 11","termid":"PBO:0079640"}


id: PBO:0070514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 13","termid":"PBO:0070514"}


id: MONDO:0008739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis of cerebral white matter","secondary_identifiers":["UMLS:C1859969","MEDGEN:347986","OMIM:202600"],"synonyms":[{"name":"agenesis of cerebral white matter","type":"exact"}],"termid":"MONDO:0008739","xrefs":{"Monarch":{"xref_id":"0008739"}}}


id: PBO:0079988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 26","termid":"PBO:0079988"}


id: GO:0170040
data:
  {"annotated_genes":["SJAG_03398","SJAG_04145","SJAG_01903","SJAG_02450","SJAG_00493","SJAG_00714","SJAG_00937","SJAG_02901","SJAG_03861","SJAG_03434","SJAG_03290","SJAG_02235","SJAG_03641","SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[70254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[78080,112949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[70674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[91470,79457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[77735,87188,96163,74022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[68337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[70008,77793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[71797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[106537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006572"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any amino acid that is incorporated into protein naturally by ribosomal translation of mRNA, and that has a specific codon for translation from mRNA to protein.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00493":null,"SJAG_00495":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"proteinogenic amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"proteinogenic amino acid breakdown","type":"exact"},{"name":"proteinogenic amino acid catabolism","type":"exact"},{"name":"proteinogenic amino acid degradation","type":"exact"}],"termid":"GO:0170040","terms_by_termid":{"GO:0006533":null,"GO:0006538":null,"GO:0006567":null,"GO:0006572":null,"GO:0010121":null,"GO:0010133":null,"GO:0019464":null,"GO:0019544":null,"GO:0019547":null,"GO:0042853":null}}


id: GO:0030573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bile acids, any of a group of steroid carboxylic acids occurring in bile.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid metabolic process","termid":"GO:0008206"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"bile acid catabolic process","secondary_identifiers":["GO:0019613"],"synonyms":[{"name":"bile acid 7alpha-dehydroxylation pathway","type":"narrow"},{"name":"bile acid breakdown","type":"exact"},{"name":"bile acid catabolism","type":"exact"},{"name":"bile acid degradation","type":"exact"},{"name":"cholate catabolic process","type":"narrow"}],"termid":"GO:0030573"}


id: GO:1903925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bisphenol A stimulus.","definition_xrefs":["PMID:22957036","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bisphenol A","termid":"GO:1903925"}


id: PBO:0047758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor alpha","termid":"PBO:0047758"}


id: PBO:0073549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHANK2 antisense RNA 1","termid":"PBO:0073549"}


id: MONDO:0023167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal alopecia congenital megalencephaly","termid":"MONDO:0023167","xrefs":{"Monarch":{"xref_id":"0023167"}}}


id: PBO:0052248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 17","termid":"PBO:0052248"}


id: MONDO:0005897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paratyphoid fever (obsolete MONDO:0005897)","termid":"MONDO:0005897","xrefs":{"Monarch":{"xref_id":"0005897"}}}


id: MONDO:0003087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma of the breast characterized by pools of mucin and islands of malignant squamous cells. Mucoepidermoid carcinomas of the breast are extremely rare.","definition_xrefs":["NCIT:C5166"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metaplastic breast carcinoma","termid":"MONDO:0006043"},{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mucoepidermoid breast carcinoma","secondary_identifiers":["MEDGEN:233721","UMLS:C1334813","DOID:4679"],"synonyms":[{"name":"breast mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid breast carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of breast","type":"exact"},{"name":"mucoepidermoid carcinoma of the breast","type":"exact"}],"termid":"MONDO:0003087","xrefs":{"Monarch":{"xref_id":"0003087"}}}


id: PBO:0055652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3092","termid":"PBO:0055652"}


id: PBO:0071037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 39","termid":"PBO:0071037"}


id: PBO:0069985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1280, pseudogene","termid":"PBO:0069985"}


id: PBO:0073964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 13","termid":"PBO:0073964"}


id: PBO:0001133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex (predicted)","termid":"PBO:0001133"}


id: GO:0019185
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that recognizes the proximal sequence element of RNA polymerase II and III snRNA promoters.","definition_xrefs":["PMID:7715707","PMID:9003788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"snRNA-activating protein complex","synonyms":[{"name":"SNAPc","type":"exact"}],"termid":"GO:0019185"}


id: GO:0032496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.","definition_xrefs":["ISBN:0721601464","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lipopolysaccharide","synonyms":[{"name":"response to LPS","type":"exact"},{"name":"response to endotoxin","type":"broad"}],"termid":"GO:0032496"}


id: GO:0110129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A histone deacetylase complex formed by the association of an HP1 protein with a SHREC complex. The SHREC2 complex is required for deacetylation of H3K14, and mediates transcriptional gene silencing by limiting RNA polymerase II access to heterochromatin. In fission yeast, the complex contains the SHREC subunits Clr1, Clr2, Clr3, and Mit1, and the HP1 protein Chp2.","definition_xrefs":["GOC:mah","PMID:19111658"],"gene_count":0,"genotype_count":0,"name":"obsolete SHREC2 complex (obsolete GO:0110129)","termid":"GO:0110129"}


id: PBO:0079489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 9","termid":"PBO:0079489"}


id: GO:0036199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholest-4-en-3-one + NADH + H+ + O2 = 26-hydroxycholest-4-en-3-one + NAD+ + H2O. This reaction involves the hydroxylation of the C26 carbon, followed by oxidation of the alcohol to the carboxylic acid via the aldehyde intermediate.","definition_xrefs":["EC:1.14.15.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cholest-4-en-3-one 26-monooxygenase activity","secondary_identifiers":["RHEA:51564","KEGG_REACTION:R09859"],"termid":"GO:0036199"}


id: GO:0042416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine biosynthetic process","termid":"GO:0042423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine biosynthetic process","synonyms":[{"name":"dopamine anabolism","type":"exact"},{"name":"dopamine biosynthesis","type":"exact"},{"name":"dopamine formation","type":"exact"},{"name":"dopamine synthesis","type":"exact"}],"termid":"GO:0042416"}


id: PBO:0052613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 5","termid":"PBO:0052613"}


id: PR:P79064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SUMO-activating enzyme subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10953:SF30","PRO:DNx","OMA:SCHPO00484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage tolerance protein rad31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4C5.04","secondary_identifiers":["UniProtKB:P79064"],"synonyms":[{"name":"Spom972h-SAE1","type":"exact"}],"termid":"PR:P79064"}


id: GO:0004069
data:
  {"annotated_genes":["SJAG_03306","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70675,77395],"is_not":false,"summary":null,"term":"GO:0004069"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate.","definition_xrefs":["EC:2.6.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_03306":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-aspartate:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00355","MetaCyc:ASPAMINOTRANS-RXN","Reactome:R-HSA-70592","Reactome:R-HSA-70581","Reactome:R-HSA-70596","Reactome:R-HSA-70613","RHEA:21824"],"synonyms":[{"name":"2-oxoglutarate-glutamate aminotransferase activity","type":"related"},{"name":"AAT","type":"related"},{"name":"AspT","type":"related"},{"name":"GOT (enzyme)","type":"related"},{"name":"L-aspartate transaminase activity","type":"broad"},{"name":"L-aspartate-2-ketoglutarate aminotransferase activity","type":"related"},{"name":"L-aspartate-2-oxoglutarate aminotransferase activity","type":"related"},{"name":"L-aspartate-2-oxoglutarate-transaminase activity","type":"related"},{"name":"L-aspartate-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"L-aspartic aminotransferase activity","type":"broad"},{"name":"aspartate alpha-ketoglutarate transaminase activity","type":"related"},{"name":"aspartate aminotransferase activity","type":"broad"},{"name":"aspartate transaminase activity","type":"broad"},{"name":"aspartate-2-oxoglutarate transaminase activity","type":"related"},{"name":"aspartate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"aspartic acid aminotransferase activity","type":"broad"},{"name":"aspartic aminotransferase activity","type":"broad"},{"name":"aspartyl aminotransferase activity","type":"broad"},{"name":"glutamate oxaloacetate transaminase activity","type":"related"},{"name":"glutamate-oxalacetate aminotransferase activity","type":"related"},{"name":"glutamate-oxalate transaminase activity","type":"related"},{"name":"glutamic oxalic transaminase activity","type":"related"},{"name":"glutamic--aspartic transaminase activity","type":"related"},{"name":"glutamic--oxaloacetic transaminase activity","type":"related"},{"name":"glutamic-aspartic aminotransferase activity","type":"related"},{"name":"glutamic-oxalacetic transaminase activity","type":"related"},{"name":"oxaloacetate transferase activity","type":"related"},{"name":"oxaloacetate-aspartate aminotransferase activity","type":"related"},{"name":"transaminase A activity","type":"related"}],"termid":"GO:0004069","terms_by_termid":{"GO:0004069":null}}


id: GO:0006528
data:
  {"annotated_genes":["SJAG_02832","SJAG_04549","SJAG_02276","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72212],"is_not":false,"summary":null,"term":"GO:0006528"},{"annotations":[57630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[111558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[101915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_02276":null,"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"asparagine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ASPARAGINESYN-PWY"],"synonyms":[{"name":"asparagine metabolism","type":"exact"}],"termid":"GO:0006528","terms_by_termid":{"GO:0006528":null,"GO:0006529":null,"GO:0019266":null,"GO:0070981":null}}


id: GO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle found in blood platelets, which is unique in that it exhibits further compartmentalization and acquires its protein content via two distinct mechanisms: (1) biosynthesis predominantly at the megakaryocyte (MK) level (with some vestigial platelet synthesis) (e.g. platelet factor 4) and (2) endocytosis and pinocytosis at both the MK and circulating platelet levels (e.g. fibrinogen (Fg) and IgG).","definition_xrefs":["PMID:8467233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"platelet alpha granule","secondary_identifiers":["Wikipedia:Platelet_alpha-granule"],"synonyms":[{"name":"platelet alpha-granule","type":"exact"}],"termid":"GO:0031091"}


id: GO:0044614
data:
  {"annotated_genes":["SJAG_03299","SJAG_03847","SJAG_01013","SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74535,75272,93748,102746],"is_not":false,"summary":null,"term":"GO:0044614"}]},"cv_name":"cellular_component","definition":"Filamentous extensions on cytoplasmic face of the nuclear pore complex (NPC). In S. cerevisiae, Nup159p, Nup82p, and Nup42p contribute to the cytoplasmic filaments. In vertebrates, Nup358 is a major component.","definition_xrefs":["PMID:20947011","GOC:dgf","PMID:19524430","PMID:22419078","PMID:18046406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01065":null,"SJAG_03299":null,"SJAG_03847":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005643","GO:0005575"],"is_obsolete":false,"name":"nuclear pore cytoplasmic filaments","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic fibers of the NPC","type":"exact"},{"name":"cytoplasmic fibers of the nuclear pore complex","type":"exact"}],"termid":"GO:0044614","terms_by_termid":{"GO:0044614":null}}


id: GO:0099500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of a vesicle with the plasma membrane, thereby releasing its contents into the extracellular space.","definition_xrefs":["GOC:bc","PMID:18618940","GOC:aruk","ISBN:0071120009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"vesicle fusion to plasma membrane","termid":"GO:0099500"}


id: PR:Q9P7D0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.19c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7D0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P4H10.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.19c","synonyms":[{"name":"Spom972h-SPBP4H10.19c","type":"exact"}],"termid":"PR:Q9P7D0"}


id: PBO:0061081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 1","termid":"PBO:0061081"}


id: PBO:0088101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Urea amidolyase; contains both urea carboxylase and allophanate hydrolase activities, degrades urea to CO2 and NH3; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation; protein abundance increases in response to DNA replication stress","termid":"PBO:0088101"}


id: PBO:0039156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 3","termid":"PBO:0039156"}


id: GO:0052220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052220)","synonyms":[{"name":"positive aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052220"}


id: PBO:0077572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 277, pseudogene","termid":"PBO:0077572"}


id: GO:1900082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arginine catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine catabolic process","termid":"GO:0033242"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of arginine catabolic process","termid":"GO:1900081"},{"relation_name":"negatively_regulates","term_name":"arginine catabolic process","termid":"GO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"negative regulation of arginine catabolic process","synonyms":[{"name":"down regulation of arginine breakdown","type":"exact"},{"name":"down regulation of arginine catabolic process","type":"exact"},{"name":"down regulation of arginine catabolism","type":"exact"},{"name":"down regulation of arginine degradation","type":"exact"},{"name":"down-regulation of arginine breakdown","type":"exact"},{"name":"down-regulation of arginine catabolic process","type":"exact"},{"name":"down-regulation of arginine catabolism","type":"exact"},{"name":"down-regulation of arginine degradation","type":"exact"},{"name":"downregulation of arginine breakdown","type":"exact"},{"name":"downregulation of arginine catabolic process","type":"exact"},{"name":"downregulation of arginine catabolism","type":"exact"},{"name":"downregulation of arginine degradation","type":"exact"},{"name":"inhibition of arginine breakdown","type":"narrow"},{"name":"inhibition of arginine catabolic process","type":"narrow"},{"name":"inhibition of arginine catabolism","type":"narrow"},{"name":"inhibition of arginine degradation","type":"narrow"},{"name":"negative regulation of arginine breakdown","type":"exact"},{"name":"negative regulation of arginine catabolism","type":"exact"},{"name":"negative regulation of arginine degradation","type":"exact"}],"termid":"GO:1900082"}


id: PBO:0017442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_activity_of","termid":"PBO:0017442"}


id: PBO:0076273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 1 like","termid":"PBO:0076273"}


id: GO:1904857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis to vascular endothelial growth factor.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:TermGenie","PMID:21885851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of cellular response to vascular endothelial growth factor stimulus","termid":"GO:1902547"},{"relation_name":"regulates","term_name":"endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:1904857"}


id: GO:0036210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration performed by one organism of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) in another organism. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).","definition_xrefs":["GOC:bf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein modification process in another organism (obsolete GO:0036210)","synonyms":[{"name":"protein modification in other organism","type":"exact"},{"name":"protein modification process in other organism","type":"exact"}],"termid":"GO:0036210"}


id: PBO:0050075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxymethylcytosine binding, ES cell specific","termid":"PBO:0050075"}


id: PBO:0075604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2","termid":"PBO:0075604"}


id: PBO:0028518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_mitotic_spindle","termid":"PBO:0028518"}


id: MONDO:0012329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature and Facioauriculothoracic malformations","secondary_identifiers":["MEDGEN:351216","UMLS:C1864791","MESH:C566457","OMIM:609654"],"synonyms":[{"name":"short stature and Facioauriculothoracic malformations","type":"exact"}],"termid":"MONDO:0012329","xrefs":{"Monarch":{"xref_id":"0012329"}}}


id: PBO:0061003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS actin remodeling regulator","termid":"PBO:0061003"}


id: MONDO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital myopathy (obsolete MONDO:0000864)","termid":"MONDO:0000864","xrefs":{"Monarch":{"xref_id":"0000864"}}}


id: MOD:01154
data:
  {"annotated_genes":["SJAG_03632","SJAG_02902","SJAG_02980","SJAG_03524"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80266,80375,80438,80494],"is_not":false,"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid to pyruvic acid.","definition_xrefs":["PubMed:10085076","PubMed:8464063","PubMed:3042771","RESID:AA0127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.0-71.1 Da","termid":"MOD:00769"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null,"SJAG_03632":null},"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Cys)","type":"exact"},{"name":"MOD_RES Pyruvic acid (Ser)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:01154","terms_by_termid":{"MOD:01154":null}}


id: PBO:0050456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOMER2 pseudogene 2","termid":"PBO:0050456"}


id: PBO:0042129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical carcinoma expressed PCNA regulatory lncRNA","termid":"PBO:0042129"}


id: MONDO:0003123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple system atrophy (obsolete MONDO:0003123)","termid":"MONDO:0003123","xrefs":{"Monarch":{"xref_id":"0003123"}}}


id: MONDO:0003432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Strabismus is the intermittent or constant misalignment of an eye so that its line of vision is not pointed at the same object as the other eye. Strabismus is caused by an imbalance in the extraocular muscles which control the positioning of the eyes. Strabismus is normal in newborns but should resolve by the time the baby is 6 months old. In older children with strabismus, the brain may learn to ignore the input from one eye, and this may lead to amblyopia, a potentially permanent decrease in vision in that eye if not corrected.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hyperopia","termid":"MONDO:0004891"},{"relation_name":"is_a","term_name":"ocular motility disease","termid":"MONDO:0001584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strabismus","secondary_identifiers":["SCTID:22066006","NCIT:C35040","MESH:D013285","UMLS:C0038379","ICD9:378.7","MEDGEN:21337","DOID:540","ICD9:378.40"],"synonyms":[{"name":"squint","type":"exact"},{"name":"strabismus","type":"exact"}],"termid":"MONDO:0003432","xrefs":{"Monarch":{"xref_id":"0003432"}}}


id: PBO:0014570
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Schizosaccharomyces only","termid":"PBO:0014570"}


id: GO:0016230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme sphingomyelin phosphodiesterase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activator activity","termid":"GO:0016004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"sphingomyelin phosphodiesterase activator activity","synonyms":[{"name":"neutral sphingomyelinase activator","type":"exact"}],"termid":"GO:0016230"}


id: PBO:0074844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 36A","termid":"PBO:0074844"}


id: PBO:0042155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 16","termid":"PBO:0042155"}


id: MONDO:0018479
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"}]},"cv_name":"mondo","definition":"Congenital adrenal hyperplasia (CAH) is an inherited endocrine disorder caused by a steroidogenic enzyme deficiency that is characterized by adrenal insufficiency and variable degrees of hyper or hypo androgyny manifestations, depending of the type and the severity of the disease.","definition_xrefs":["Orphanet:418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid inherited metabolic disorder","termid":"MONDO:0005523"},{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"},{"relation_name":"is_a","term_name":"hereditary endocrine growth disease","termid":"MONDO:0015514"},{"relation_name":"is_a","term_name":"adrenogenital syndrome","termid":"MONDO:0015898"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"congenital adrenal hyperplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050811","ICD9:255.2","MESH:D000312","UMLS:C0001627","MEDGEN:7900","GARD:1467","NORD:992","SCTID:237751000","MedDRA:10010323","NANDO:2100134","icd11.foundation:172733763","NCIT:C34360","NANDO:1200397","NANDO:2200370","NANDO:1200396"],"synonyms":[{"name":"CAH","type":"exact"},{"name":"adrenal hyperplasia","type":"broad"},{"name":"adrenal hyperplasia, congenital","type":"exact"},{"name":"adrenogenital disorder","type":"broad"},{"name":"adrenogenital syndrome","type":"broad"},{"name":"congenital adrenal gland hyperplasia","type":"exact"},{"name":"congenital lipoid adrenal hyperplasia","type":"related"},{"name":"lipoid CAH","type":"related"}],"termid":"MONDO:0018479","terms_by_termid":{"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0018479"}}}


id: FYPO:0000100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chloramphenicol. Cells stop growing (and may die) at a concentration of chloramphenicol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to chloramphenicol","synonyms":[{"name":"hypersensitive to chloramphenicol","type":"exact"},{"name":"sensitive to chloramphenicol during mitotic cell cycle","type":"related"},{"name":"sensitive to chloramphenicol during vegetative growth","type":"exact"}],"termid":"FYPO:0000100"}


id: PBO:0090574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L60","termid":"PBO:0090574"}


id: MONDO:0007600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which the kidneys do not absorb certain substances into the body. These substances, such as cysteine, fructose, galactose, or glycogen, are lost in the urine. Fanconi syndrome is thought to be caused by genetic and environmental factors, and it may be diagnosed at any age. Symptoms of Fanconi syndrome include increased urine production (which may cause dehydration), weakness, and abnormalities of the bones.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited Fanconi renotubular syndrome","termid":"MONDO:0100238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"primary Fanconi syndrome","secondary_identifiers":["MEDGEN:341765","Orphanet:3337","UMLS:C1857395","GARD:9118","NCIT:C123229"],"synonyms":[{"name":"FRTS1","type":"narrow"},{"name":"Fanconi renotubular syndrome 1","type":"narrow"},{"name":"primary Fanconi renotubular syndrome","type":"narrow"}],"termid":"MONDO:0007600","xrefs":{"Monarch":{"xref_id":"0007600"}}}


id: PBO:0082917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c1; component of the mitochondrial respiratory chain; expression is regulated by the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex","termid":"PBO:0082917"}


id: PBO:0038681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 6","termid":"PBO:0038681"}


id: PBO:0047318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 2","termid":"PBO:0047318"}


id: GO:0047715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + hypotaurocyamine = N(omega)-phosphohypotaurocyamine + ADP + 2 H+.","definition_xrefs":["EC:2.7.3.6","RHEA:24008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"hypotaurocyamine kinase activity","secondary_identifiers":["MetaCyc:HYPOTAUROCYAMINE-KINASE-RXN","KEGG_REACTION:R03939"],"synonyms":[{"name":"ATP:hypotaurocyamine N-phosphotransferase activity","type":"related"}],"termid":"GO:0047715"}


id: MONDO:0013577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorder of adipose tissue characterized by symmetric and bilateral enlargement of the lower extremities due to abnormal deposition of subcutaneous fat often in obese women. It is associated with hematoma, pain and may progress to secondary lymphedema which is known as lipolymphedema.","definition_xrefs":["MESH:D065134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipedema","secondary_identifiers":["MEDGEN:451048","UMLS:C0398370","Orphanet:77243","HP:0100695","SCTID:234102003","MedDRA:10063955","OMIM:614103"],"synonyms":[{"name":"Lipedema (disease)","type":"exact"},{"name":"lipedema","type":"exact"}],"termid":"MONDO:0013577","xrefs":{"Monarch":{"xref_id":"0013577"}}}


id: GO:0090081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of canonical Wnt signaling pathway that regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell, followed by relaying of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heart induction by regulation of canonical Wnt signaling pathway (obsolete GO:0090081)","synonyms":[{"name":"regulation of heart induction by regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of heart induction by regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of heart induction by regulation of canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0090081"}


id: PBO:0056003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2","termid":"PBO:0056003"}


id: MONDO:0011291
data:
  {"annotated_genes":["SJAG_03656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85008],"is_not":false,"summary":null,"term":"MONDO:0011291"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by feeding problems, mild-to-moderate neurologic involvement with hypotonia, poor head control, developmental delay, ataxia, strabismus, and seizures, ranging from febrile convulsions to epilepsy. Retinal degeneration has also been reported. A minority of patients show other manifestations, particularly intestinal (such as protein-losing enteropathy) and liver involvement. The disease is caused by loss of function mutations of the gene ALG6 (1p31.3).","definition_xrefs":["Orphanet:79320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"ALG6-congenital disorder of glycosylation 1C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535741","DOID:0080555","MEDGEN:443952","OMIM:603147","SCTID:709412006","UMLS:C2930997","GARD:9829","NCIT:C126869"],"synonyms":[{"name":"ALG6 congenital disorder of glycosylation","type":"exact"},{"name":"ALG6-CDG","type":"related"},{"name":"ALG6-CDG (CDG-Ic)","type":"exact"},{"name":"ALG6-CDG1C","type":"exact"},{"name":"ALG6-congenital disorder of glycosylation 1C","type":"exact"},{"name":"CDG 1C","type":"related"},{"name":"CDG Ic","type":"related"},{"name":"CDG syndrome type Ic","type":"exact"},{"name":"CDG-Ic","type":"exact"},{"name":"CDG1C","type":"exact"},{"name":"CDGIc","type":"exact"},{"name":"CDGS5 (formerly)","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type Ic","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1C","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type 1 with deficient glycosylation of dolichol-linked oligosaccharide (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type I, with deficient glycosylation of dolichol-linked oligosaccharide","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type I, with deficient glycosylation of dolichol-linked oligosaccharide, formerly","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type V","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type V (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type V, formerly","type":"related"},{"name":"congenital disorder of glycosylation caused by mutation in ALG6","type":"exact"},{"name":"congenital disorder of glycosylation type 1C","type":"exact"},{"name":"congenital disorder of glycosylation type Ic","type":"exact"},{"name":"congenital disorder of glycosylation, type Ic","type":"related"},{"name":"glucosyltransferase 1 deficiency","type":"exact"}],"termid":"MONDO:0011291","terms_by_termid":{"MONDO:0011291":null},"xrefs":{"Monarch":{"xref_id":"0011291"}}}


id: GO:1901041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptide antigen transport.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of peptide antigen transport","termid":"GO:1901039"},{"relation_name":"positively_regulates","term_name":"peptide antigen transport","termid":"GO:0046968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of peptide antigen transport","synonyms":[{"name":"activation of peptide antigen transport","type":"narrow"},{"name":"up regulation of peptide antigen transport","type":"exact"},{"name":"up-regulation of peptide antigen transport","type":"exact"},{"name":"upregulation of peptide antigen transport","type":"exact"}],"termid":"GO:1901041"}


id: GO:0045829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin production","termid":"GO:0002638"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"negative regulation of B cell activation","termid":"GO:0050869"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"negative regulation of isotype switching","synonyms":[{"name":"down regulation of isotype switching","type":"exact"},{"name":"down-regulation of isotype switching","type":"exact"},{"name":"downregulation of isotype switching","type":"exact"},{"name":"inhibition of isotype switching","type":"narrow"},{"name":"negative regulation of class switch recombination","type":"exact"},{"name":"negative regulation of class switching","type":"exact"},{"name":"negative regulation of isotype switch recombination","type":"exact"}],"termid":"GO:0045829"}


id: PBO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.1.13","termid":"PBO:0001988"}


id: GO:0090393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a sepal giant cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"sepal giant cell differentiation","termid":"GO:0090392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal giant cell development","synonyms":[{"name":"sepal giant cell formation","type":"related"}],"termid":"GO:0090393"}


id: MONDO:0033839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"radiation-induced disorder","termid":"MONDO:0043459"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"},{"relation_name":"is_a","term_name":"osteoradionecrosis","termid":"MONDO:0043735"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoradionecrosis of the mandible","secondary_identifiers":["GARD:22138","Orphanet:521127","UMLS:C1290728","MEDGEN:713081","icd11.foundation:677862301"],"termid":"MONDO:0033839","xrefs":{"Monarch":{"xref_id":"0033839"}}}


id: MONDO:1012922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any centronuclear myopathy that occurs in dogs due to a mutation in the DNM2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, dog","termid":"MONDO:1010918"},{"relation_name":"is_a","term_name":"centronuclear myopathy, non-human animal","termid":"MONDO:1012963"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centronuclear myopathy, DNM2-related, dog","secondary_identifiers":["OMIA:002534-9615"],"synonyms":[{"name":"ADCNM","type":"exact"},{"name":"autosomal dominant centronuclear myopathy","type":"related"},{"name":"centronuclear myopathy 1, DNM2-related, dog","type":"exact"}],"termid":"MONDO:1012922","xrefs":{"Monarch":{"xref_id":"1012922"}}}


id: GO:0070099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a chemokine-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of chemokine-mediated signaling pathway","synonyms":[{"name":"regulation of chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070099"}


id: PBO:0040040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor negatively regulated lncRNA","termid":"PBO:0040040"}


id: PBO:0005245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L2 (predicted)","termid":"PBO:0005245"}


id: FYPO:0006076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature siRNA measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"},{"relation_name":"is_a","term_name":"decreased siRNA level","termid":"FYPO:0004205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"siRNA absent from cell","synonyms":[{"name":"siRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"siRNA absent from cell during vegetative growth","type":"exact"},{"name":"small interfering RNA absent from cell","type":"exact"}],"termid":"FYPO:0006076"}


id: PBO:0054497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1897","termid":"PBO:0054497"}


id: PR:G2TRM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fmc1 gene.","definition_xrefs":["UniProtKB:G2TRM0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase assembly factor fmc1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.11","synonyms":[{"name":"Spom972h-fmc1","type":"exact"},{"name":"formation of mitochondrial complexes protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRM0"}


id: PBO:0065618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 phosphatase activator","termid":"PBO:0065618"}


id: PBO:0063427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 1","termid":"PBO:0063427"}


id: PBO:0084353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase; reduces intracellular ROS and contributes to L-proline analog resistance and tolerance to ethanol and freezing; member of N-acetyltransferase superfamily; not found in S288C, only present in strains with Sigma1278b background; located on left arm of chromosome XIV approximately 15 kb from telomere","termid":"PBO:0084353"}


id: PBO:0109128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, EGF-CFC family member 3","termid":"PBO:0109128"}


id: PBO:0026810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_cell_wall-degrading_enzymes","termid":"PBO:0026810"}


id: PBO:0076039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 36","termid":"PBO:0076039"}


id: GO:0071193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv channel interacting protein KChIP2 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"Kv4.2-KChIP2 channel complex","secondary_identifiers":["CORUM:607"],"termid":"GO:0071193"}


id: GO:0039612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of phosphorylation of viral or host proteins in a host.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein phosphorylation (obsolete GO:0039612)","termid":"GO:0039612"}


id: GO:0075528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus effects a change in the host immune response.","definition_xrefs":["GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by virus of host immune response (obsolete GO:0075528)","synonyms":[{"name":"regulation by virus of host immune system process","type":"exact"}],"termid":"GO:0075528"}


id: GO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8'-apo-beta-carotenol + O2 = (E,E)-7-hydroxy-6-methylhepta-3,5-dienal + 14'-apo-beta-carotenal.","definition_xrefs":["RHEA:26023","EC:1.13.11.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"apo-beta-carotenoid-14',13'-dioxygenase activity","secondary_identifiers":["MetaCyc:1.13.12.12-RXN","KEGG_REACTION:R08889"],"synonyms":[{"name":"8'-apo-beta-carotenol:O2 oxidoreductase activity","type":"related"},{"name":"apo-b-carotenoid-14',13'-dioxygenase activity","type":"exact"}],"termid":"GO:0050588"}


id: GO:1903682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell-cell adhesion involved in epithelium migration.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:18394891","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:1903681"},{"relation_name":"negatively_regulates","term_name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell-cell adhesion involved in epithelium migration","synonyms":[{"name":"down regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"down-regulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"downregulation of epithelial cell-cell adhesion involved in epithelium migration","type":"exact"},{"name":"inhibition of epithelial cell-cell adhesion involved in epithelium migration","type":"narrow"}],"termid":"GO:1903682"}


id: PBO:0028259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3K9me_binding","termid":"PBO:0028259"}


id: GO:0002555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a platelet or group of platelets.","definition_xrefs":["GOC:add","PMID:9117517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"platelet degranulation","termid":"GO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"histamine secretion by platelet","termid":"GO:0002555"}


id: MONDO:0002406
data:
  {"annotated_genes":["SJAG_03850","SJAG_04109"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[86303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"An inflammatory process affecting the skin. Signs include red rash, itching, and blister formation. Representative examples are contact dermatitis, atopic dermatitis, and seborrheic dermatitis.","definition_xrefs":["NCIT:C2983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03850":null,"SJAG_04109":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:43116000","MEDGEN:849741","MESH:D003872","DOID:2723","UMLS:C3875321","ICD9:692.9"],"synonyms":[{"name":"inflammation of skin","type":"exact"},{"name":"inflammation of the skin","type":"exact"},{"name":"inflammation of zone of skin","type":"exact"},{"name":"inflammatory skin disease","type":"exact"},{"name":"skin inflammation","type":"exact"},{"name":"zone of skin inflammation","type":"exact"}],"termid":"MONDO:0002406","terms_by_termid":{"MONDO:0008218":null,"MONDO:0008296":null},"xrefs":{"Monarch":{"xref_id":"0002406"}}}


id: PBO:0041494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 50","termid":"PBO:0041494"}


id: MONDO:0019305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immune deficiency with skin involvement (obsolete MONDO:0019305)","secondary_identifiers":["Orphanet:79391"],"termid":"MONDO:0019305","xrefs":{"Monarch":{"xref_id":"0019305"}}}


id: GO:0044081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus interferes with, inhibits or disrupts a nitric oxide mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk","PMID:23167250","PMID:29089430"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host nitric oxide-mediated signaling (obsolete GO:0044081)","synonyms":[{"name":"disruption of host nitric oxide-mediated signaling","type":"exact"},{"name":"modulation by symbiont of host nitric oxide mediated signal transduction","type":"exact"},{"name":"modulation of host nitric oxide-mediated signal transduction by symbiont","type":"exact"},{"name":"modulation of host nitric oxide-mediated signaling by symbiont","type":"exact"},{"name":"modulation of host nitric oxide-mediated signalling by symbiont","type":"exact"},{"name":"regulation by symbiont of host nitric oxide-mediated signal transduction","type":"broad"},{"name":"suppression of host nitric oxide-mediated signaling","type":"exact"}],"termid":"GO:0044081"}


id: FYPO:0002774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of ubiquitinated protein measured in the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of ubiquitinated protein in cell during vegetative growth","synonyms":[{"name":"increased accumulation of ubiquitinated protein in cell during vegetative growth","type":"related"},{"name":"increased level of ubiquitinated protein in cell during mitotic cell cycle","type":"related"},{"name":"increased ubiquitinated protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0002774"}


id: MONDO:0005833
data:
  {"annotated_genes":["SJAG_00993","SJAG_03453","SJAG_02572","SJAG_03536","SJAG_00570","SJAG_02648","SJAG_01407","SJAG_02342","SJAG_04745","SJAG_01181","SJAG_02923","SJAG_01697","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012146"},{"annotations":[85448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011336"},{"annotations":[86395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013135"},{"annotations":[85753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[86248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[86100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[86690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[85974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[85967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[87029,87030,87031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[85548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[86419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"}]},"cv_name":"mondo","definition":"A disease involving the lymphatic part of lymphoid system.","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid system disorder","termid":"MONDO:0044986"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01407":null,"SJAG_01697":null,"SJAG_02342":null,"SJAG_02453":null,"SJAG_02572":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic system disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D008206","EFO:0007352","DOID:75","MEDGEN:892707","NCIT:C50764","SCTID:362971004","UMLS:C4021976"],"synonyms":[{"name":"adenopathy","type":"related"},{"name":"disease of lymphatic part of lymphoid system","type":"exact"},{"name":"disease of lympoid system","type":"related"},{"name":"disease or disorder of lymphatic part of lymphoid system","type":"exact"},{"name":"disorder of lymph node and lymphatics","type":"exact"},{"name":"disorder of lymphatic part of lymphoid system","type":"exact"},{"name":"disorder of lymphatic system","type":"exact"},{"name":"disorder of lymphoid system","type":"related"},{"name":"glands, swollen","type":"exact"},{"name":"lymphadenopathy","type":"narrow"},{"name":"lymphangiopathy","type":"narrow"},{"name":"lymphatic disease","type":"exact"},{"name":"lymphatic disorder","type":"exact"},{"name":"lymphatic part of lymphoid system disease","type":"exact"},{"name":"lymphatic part of lymphoid system disease or disorder","type":"exact"},{"name":"lympoid system disease","type":"related"},{"name":"swollen gland","type":"exact"},{"name":"swollen glands","type":"exact"}],"termid":"MONDO:0005833","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0009756":null,"MONDO:0011257":null,"MONDO:0011336":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0011997":null,"MONDO:0012146":null,"MONDO:0012371":null,"MONDO:0013135":null,"MONDO:0013186":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0005833"}}}


id: PBO:0072554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding A","termid":"PBO:0072554"}


id: GO:0090463
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96371],"is_not":false,"summary":null,"term":"GO:0090463"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of lysine within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular lysine homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular lysine homeostasis","type":"exact"},{"name":"lysine homeostasis","type":"exact"}],"termid":"GO:0090463","terms_by_termid":{"GO:0090463":null}}


id: GO:0009872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A mechanism that functions to prevent self-fertilization in flowering plants that is determined by the diploid genotype of the parent plant. In sporophytic incompatibility the pollen does not germinate, consequently fertilization does not take place.","definition_xrefs":["ISBN:0387987819"],"gene_count":0,"genotype_count":0,"name":"obsolete gametophytic self-incompatibility (obsolete GO:0009872)","synonyms":[{"name":"gametophytic self-incompatibility","type":"exact"}],"termid":"GO:0009872"}


id: MONDO:0012659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the C3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 9","secondary_identifiers":["OMIM:611378","UMLS:C1969651","DOID:0110021","MEDGEN:370717","MESH:C566958"],"synonyms":[{"name":"ARMD9","type":"exact"},{"name":"C3 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 9","type":"exact"},{"name":"age-related macular degeneration caused by mutation in C3","type":"exact"},{"name":"macular Degeneration, age-related, type 9","type":"exact"},{"name":"macular degeneration, age-related, 9","type":"related"}],"termid":"MONDO:0012659","xrefs":{"Monarch":{"xref_id":"0012659"}}}


id: GO:0060460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the left lung are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung morphogenesis","termid":"GO:0060425"},{"relation_name":"part_of","term_name":"left lung development","termid":"GO:0060459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left lung morphogenesis","termid":"GO:0060460"}


id: GO:0046853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into inositol or a phosphatidylinositol. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol or phosphatidylinositol phosphorylation (obsolete GO:0046853)","synonyms":[{"name":"inositol and derivative phosphorylation","type":"related"},{"name":"inositol or phosphatidylinositol phosphorylation","type":"exact"},{"name":"myo-inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol or phosphatidyl-myo-inositol phosphorylation","type":"narrow"}],"termid":"GO:0046853"}


id: GO:0090395
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection that is a short, rounded projection from a plant epidermal cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"plant cell papilla","termid":"GO:0090395"}


id: MONDO:1011559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methemoglobinemia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methemoglobinemia, non-human animal","termid":"MONDO:1011412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methemoglobinemia, domestic cat","secondary_identifiers":["OMIA:001171-9685"],"termid":"MONDO:1011559","xrefs":{"Monarch":{"xref_id":"1011559"}}}


id: PBO:0040467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase mitochondrial F1 complex assembly factor 1","termid":"PBO:0040467"}


id: PBO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 69","termid":"PBO:0042012"}


id: PBO:0079325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 13C","termid":"PBO:0079325"}


id: PBO:0038381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_allergic_trigger","termid":"PBO:0038381"}


id: PBO:0049340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 5","termid":"PBO:0049340"}


id: PBO:0091200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala","termid":"PBO:0091200"}


id: GO:0072016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular parietal epithelial cell over time, from its formation to the mature structure. Glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"glomerular parietal epithelial cell differentiation","termid":"GO:0072139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular parietal epithelial cell development","synonyms":[{"name":"Bowman's capsule development","type":"exact"}],"termid":"GO:0072016"}


id: MONDO:0007291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial cerebral cavernous malformation (obsolete MONDO:0007291)","termid":"MONDO:0007291","xrefs":{"Monarch":{"xref_id":"0007291"}}}


id: PATO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of its constitution.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality of a substance","termid":"PATO:0002198"}


id: MONDO:0016420
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85874,85873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"familial flecked retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:979898273","Orphanet:227786","ICD10CM:H35.5"],"synonyms":[{"name":"hereditary flecked retinopathy","type":"exact"}],"termid":"MONDO:0016420","terms_by_termid":{"MONDO:0010819":null},"xrefs":{"Monarch":{"xref_id":"0016420"}}}


id: PBO:0114135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulphite transmembrane transporter Ssu2","termid":"PBO:0114135"}


id: PBO:0077062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 8","termid":"PBO:0077062"}


id: PBO:0072002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 4","termid":"PBO:0072002"}


id: MONDO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Waldenstroem's macroglobulinemia (obsolete MONDO:0000830)","termid":"MONDO:0000830","xrefs":{"Monarch":{"xref_id":"0000830"}}}


id: MONDO:0100271
data:
  {"annotated_genes":["SJAG_05950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013938"},{"annotations":[86996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013939"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX26 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0019053","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX26 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX26 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX26 defect","type":"exact"}],"termid":"MONDO:0100271","terms_by_termid":{"MONDO:0013938":null,"MONDO:0013939":null},"xrefs":{"Monarch":{"xref_id":"0100271"}}}


id: PR:O14270
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fhl1 gene.","definition_xrefs":["UniProtKB:O14270","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.08","synonyms":[{"name":"Spom972h-fhl1","type":"exact"}],"termid":"PR:O14270"}


id: PBO:0064208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen activator, urokinase","termid":"PBO:0064208"}


id: GO:1990693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi cis cisterna membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of Golgi cis cisterna membrane (obsolete GO:1990693)","synonyms":[{"name":"intrinsic component of cis-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990693"}


id: PBO:0109016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 17, pseudogene","termid":"PBO:0109016"}


id: MONDO:0016583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"volvulus of midgut","termid":"MONDO:0008666"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial intestinal malrotation-facial anomalies syndrome","secondary_identifiers":["Orphanet:2454"],"synonyms":[{"name":"Stalker Chitayat syndrome","type":"related"},{"name":"Stalker-Chitayat syndrome","type":"exact"},{"name":"intestinal malrotation facial anomalies familial type","type":"related"}],"termid":"MONDO:0016583","xrefs":{"Monarch":{"xref_id":"0016583"}}}


id: PATO:0000569
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A height which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"height","termid":"PATO:0000119"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased height","synonyms":[{"name":"short","type":"related"}],"termid":"PATO:0000569"}


id: GO:0090638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that depends on direct conversion of the phosphatidyl-base phosphatidylethanolamine to phosphatidylcholine by successive methylations.","definition_xrefs":["MetaCyc:PWY-6825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphatidylethanolamine","termid":"GO:0090638"}


id: SO:0000012
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The primary transcript of any one of several small cytoplasmic RNA molecules present in the cytoplasm and sometimes nucleus of a Eukaryote.","direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA_primary_transcript","synonyms":[{"name":"scRNA primary transcript","type":"exact"},{"name":"scRNA transcript","type":"exact"},{"name":"small cytoplasmic RNA","type":"related"},{"name":"small cytoplasmic RNA transcript","type":"exact"},{"name":"small_cytoplasmic_RNA","type":"related"}],"termid":"SO:0000012"}


id: MONDO:0003720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant neoplasm arising from the kidney. It is characterized by the presence of spindle-shaped fibroblasts and collagenous stroma formation in a herringbone growth pattern.","definition_xrefs":["NCIT:C7726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney sarcoma","termid":"MONDO:0002930"},{"relation_name":"is_a","term_name":"fibrosarcoma","termid":"MONDO:0005164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"kidney fibrosarcoma","secondary_identifiers":["MEDGEN:116050","DOID:5982","UMLS:C0238208"],"synonyms":[{"name":"fibrosarcoma of kidney","type":"exact"},{"name":"fibrosarcoma of the kidney","type":"exact"},{"name":"kidney fibrosarcoma","type":"exact"},{"name":"kidney fibrosarcoma (disease)","type":"exact"},{"name":"renal fibrosarcoma","type":"exact"}],"termid":"MONDO:0003720","xrefs":{"Monarch":{"xref_id":"0003720"}}}


id: PBO:0039045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 5","termid":"PBO:0039045"}


id: MONDO:0001676
data:
  {"annotated_genes":["SJAG_03961","SJAG_01841"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[86492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"}]},"cv_name":"mondo","definition":"A rare congenital metabolic disorder characterized by an inborn error of porphyrin-heme biosynthesis. Signs and symptoms include painful cutaneous photosensitivity leading to blistering and scarring of the exposed skin areas, erythrodontia, red discoloration of urine, hemolytic anemia, and splenomegaly.","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic porphyria","termid":"MONDO:0002520"},{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01841":null,"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0002515","MONDO:0019142","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"erythropoietic protoporphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D046351","NANDO:2201266","OMIMPS:177000","MEDGEN:56455","Orphanet:659681","SCTID:51022005","icd11.foundation:1642941362","NANDO:1200815","UMLS:C0162568","DOID:13270"],"synonyms":[{"name":"EPP (erythropoietic protoporphyria porphyria)","type":"exact"},{"name":"protoporphyria","type":"exact"}],"termid":"MONDO:0001676","terms_by_termid":{"MONDO:0008319":null,"MONDO:0010420":null},"xrefs":{"Monarch":{"xref_id":"0001676"}}}


id: MONDO:1011991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod dysplasia, non-human animal","secondary_identifiers":["OMIA:001670"],"termid":"MONDO:1011991","xrefs":{"Monarch":{"xref_id":"1011991"}}}


id: PR:O14084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imt1 gene.","definition_xrefs":["UniProtKB:O14084","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphoceramide mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.01","synonyms":[{"name":"IPC mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-imt1","type":"exact"}],"termid":"PR:O14084"}


id: PBO:0076823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 5B","termid":"PBO:0076823"}


id: MONDO:0012961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 4q27.","definition_xrefs":["PMID:8072542","DOID:0110760","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 23","secondary_identifiers":["MEDGEN:382610","MESH:C567233","UMLS:C2675472","OMIM:612622"],"synonyms":[{"name":"IDDM23","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 23","type":"related"},{"name":"insulin-dependent diabetes mellitus 23","type":"exact"}],"termid":"MONDO:0012961","xrefs":{"Monarch":{"xref_id":"0012961"}}}


id: GO:1990730
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex between the ATPase VCP (p97) and its cofactor p47 (NSFL1C). In human, the protein complex consists of one homotrimer of NSFL1C/p47 per homohexamer of VCP/p97.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:9214505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"VCP-NSFL1C complex","synonyms":[{"name":"p97-p47 complex","type":"exact"}],"termid":"GO:1990730"}


id: GO:0070137
data:
  {"annotated_genes":["SJAG_02214","SJAG_16454"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74707,105895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within a small protein such as ubiquitin or a ubiquitin-like protein (e.g. APG8, ISG15, NEDD8, SUMO).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"},{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-like protein-specific endopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"small conjugating protein-specific endopeptidase activity","type":"exact"}],"termid":"GO:0070137","terms_by_termid":{"GO:0070139":null}}


id: PBO:0055473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2906","termid":"PBO:0055473"}


id: GO:1901829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of zeaxanthin bis(beta-D-glucoside).","definition_xrefs":["UniPathway:UPA00798","GOC:TermGenie","MetaCyc:PWY-6288","PMID:20075616","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"beta-glucoside catabolic process","termid":"GO:1901805"},{"relation_name":"is_a","term_name":"zeaxanthin bis(beta-D-glucoside) metabolic process","termid":"GO:1901828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"zeaxanthin bis(beta-D-glucoside) catabolic process","synonyms":[{"name":"zeaxanthin bis(beta-D-glucoside) breakdown","type":"exact"},{"name":"zeaxanthin bis(beta-D-glucoside) catabolism","type":"exact"},{"name":"zeaxanthin bis(beta-D-glucoside) degradation","type":"exact"},{"name":"zeaxanthin diglucoside breakdown","type":"exact"},{"name":"zeaxanthin diglucoside catabolism","type":"exact"},{"name":"zeaxanthin diglucoside degradation","type":"exact"}],"termid":"GO:1901829"}


id: MONDO:0014838
data:
  {"annotated_genes":["SJAG_03576"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85392],"is_not":false,"summary":null,"term":"MONDO:0014838"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the SMARCE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03576":null},"genotype_count":0,"is_obsolete":false,"name":"Coffin-Siris syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310788","GARD:16170","MEDGEN:934755","OMIM:616938","DOID:0112368"],"synonyms":[{"name":"COFFIN-SIRIS syndrome 5","type":"related"},{"name":"CSS5","type":"related"},{"name":"Coffin-Siris syndrome 5","type":"exact"},{"name":"Coffin-Siris syndrome caused by mutation in SMARCE1","type":"exact"},{"name":"Coffin-Siris syndrome type 5","type":"exact"},{"name":"SMARCE1 Coffin-Siris syndrome","type":"exact"}],"termid":"MONDO:0014838","terms_by_termid":{"MONDO:0014838":null},"xrefs":{"Monarch":{"xref_id":"0014838"}}}


id: MONDO:0010051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic tetraplegia-retinitis pigmentosa-intellectual disability syndrome is characterized by nonprogressive spastic paraplegia, retinitis pigmentosa, and intellectual deficit. It has been described in two brothers born to consanguineous parents.","definition_xrefs":["Orphanet:3011"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic tetraplegia-retinitis pigmentosa-intellectual disability syndrome","secondary_identifiers":["OMIM:270950","MEDGEN:376519","GARD:4932","MESH:C564808","UMLS:C1849112"],"synonyms":[{"name":"progressive quadriparesis, intellectual disability, retinitis pigmentosa and hearing loss","type":"related"},{"name":"progressive quadriparesis, mental retardation, retinitis pigmentosa and hearing loss","type":"related"},{"name":"spastic quadriplegia retinitis pigmentosa intellectual disability","type":"related"},{"name":"spastic quadriplegia retinitis pigmentosa mental retardation","type":"related"},{"name":"spastic quadriplegia, retinitis pigmentosa, and intellectual disability","type":"related"},{"name":"spastic quadriplegia, retinitis pigmentosa, and mental retardation","type":"related"},{"name":"spastic quadriplegia-retinitis pigmentosa-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0010051","xrefs":{"Monarch":{"xref_id":"0010051"}}}


id: PBO:0077491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 212","termid":"PBO:0077491"}


id: GO:0034111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of homotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"negatively_regulates","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of homotypic cell-cell adhesion","termid":"GO:0034111"}


id: PBO:0043719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 7","termid":"PBO:0043719"}


id: PBO:0078935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 3-1","termid":"PBO:0078935"}


id: PBO:0068129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 436","termid":"PBO:0068129"}


id: MONDO:0004154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central nervous system embryonal carcinoma (obsolete MONDO:0004154)","termid":"MONDO:0004154","xrefs":{"Monarch":{"xref_id":"0004154"}}}


id: GO:1903864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a P granule into its constituent components.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:25535836","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule organization","termid":"GO:0030719"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"P granule disassembly","synonyms":[{"name":"germline granule disassembly","type":"exact"},{"name":"polar granule disassembly","type":"exact"}],"termid":"GO:1903864"}


id: GO:0055121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a high fluence blue light stimulus by the blue high-fluence system. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm. The blue high-fluence system responds to blue light at levels between 100 and 1000 micromols/m2.","definition_xrefs":["GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to blue light","termid":"GO:0009637"},{"relation_name":"is_a","term_name":"response to high light intensity","termid":"GO:0009644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to high fluence blue light stimulus by blue high-fluence system","synonyms":[{"name":"response to high fluence blue light","type":"broad"},{"name":"response to high fluence blue light by bhf system","type":"related"}],"termid":"GO:0055121"}


id: PBO:0056616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTOR associated protein, eak-7 homolog","termid":"PBO:0056616"}


id: PBO:0085592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud growth; involved in the transport of cell wall components from the Golgi to the cell surface; similar in structure and functionally redundant with Sbe2p; SBE22 has a paralog, SBE2, that arose from the whole genome duplication","termid":"PBO:0085592"}


id: MONDO:0018386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility due to hypothalamic-pituitary-gonadal axis disorder (obsolete MONDO:0018386)","secondary_identifiers":["Orphanet:399572"],"synonyms":[{"name":"rare male infertility due to gonadotropic axis disorder","type":"exact"},{"name":"rare male infertility due to hypothalamic-pituitary-testicular axis disorder","type":"exact"}],"termid":"MONDO:0018386","xrefs":{"Monarch":{"xref_id":"0018386"}}}


id: PBO:0079290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 8","termid":"PBO:0079290"}


id: GO:0019070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes involved in creating a mature, stable viral genome. Begins after genome replication with a newly synthesized nucleic acid and ends when the genome is ready to be packaged. Includes the addition of proteins to the newly synthesized genome, and DNA repair processes.","definition_xrefs":["GOC:pk","PMID:21490093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome maturation","secondary_identifiers":["Reactome:R-HSA-168330"],"termid":"GO:0019070"}


id: GO:0061394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (obsolete GO:0061394)","termid":"GO:0061394"}


id: PBO:0085940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mutant is defective in directing meiotic recombination events to homologous chromatids; the authentic, non-tagged protein is detected in highly purified mitochondria and is phosphorylated","termid":"PBO:0085940"}


id: PBO:0076074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20-related kinase adaptor beta pseudogene 1","termid":"PBO:0076074"}


id: GO:0036378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Conversion of vitamin D3 from its largely inactive form (calciol, also called cholecalciferol) into a hormonally active form (calcitriol). Conversion requires 25-hydroxylation of calciol in the liver to form calcidiol, and subsequent 1,alpha-hydroxylation of calcidiol in the kidney to form calcitriol.","definition_xrefs":["GOC:BHF","PMID:17426122","GOC:rl","PMID:20511049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D biosynthetic process","termid":"GO:0042368"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"calcitriol biosynthetic process from calciol","synonyms":[{"name":"1alpha,25(OH)2D3 biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxycholecalciferol biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxyvitamin D3 biosynthesis","type":"broad"},{"name":"calcitriol biosynthesis from calciol","type":"exact"},{"name":"vitamin D3 activation","type":"exact"}],"termid":"GO:0036378"}


id: GO:0006988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete unfolded protein response, cleavage of primary transcript encoding UFP-specific transcription factor (obsolete GO:0006988)","synonyms":[{"name":"unfolded protein response, cleavage of primary transcript encoding UFP-specific transcription factor","type":"exact"}],"termid":"GO:0006988"}


id: GO:0036408
data:
  {"annotated_genes":["SJAG_02773","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90521,91177],"is_not":false,"summary":null,"term":"GO:0036408"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 14) = CoA + histone H3 N6-acetyl-L-lysine (position 14).","definition_xrefs":["PMID:21289066","GOC:vw","PMID:18552846","PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02165":null,"SJAG_02773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0034212","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"histone H3K14 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K14 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K14 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K14 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K14 specific)","type":"exact"}],"termid":"GO:0036408","terms_by_termid":{"GO:0036408":null}}


id: PR:O14328
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ksp1 gene.","definition_xrefs":["UniProtKB:O14328","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ksp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.13","synonyms":[{"name":"Spom972h-ksp1","type":"exact"},{"name":"serine/threonine-protein kinase ppk20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14328"}


id: PBO:0065778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine rich 1","termid":"PBO:0065778"}


id: PBO:0069713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 993, pseudogene","termid":"PBO:0069713"}


id: MONDO:0017155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension associated with schistosomiasis (PAHS) is a form of pulmonary arterial hypertension characterized by an elevated pulmonary arterial resistance leading to right heart failure, observed as a complication of a chronic schistosomiasis.","definition_xrefs":["Orphanet:275823"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with schistosomiasis (obsolete MONDO:0017155)","secondary_identifiers":["SCTID:697907008","ICD9:416.8"],"synonyms":[{"name":"PAH associated with schistosomiasis","type":"exact"}],"termid":"MONDO:0017155","xrefs":{"Monarch":{"xref_id":"0017155"}}}


id: PBO:0068064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 369","termid":"PBO:0068064"}


id: PBO:0017653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication preinitiation complex assembly protein","termid":"PBO:0017653"}


id: MONDO:0017183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"HyHyperinsulism due to UCP2 deficiency (HIUCP2) is a form of diazoxide-sensitive diffuse hyperinsulinism (DHI) characterized by hypoglycemic episodes from the neonatal period, a good clinical response to diazoxide and a probable transient nature of the disease with spontaneous resolution.","definition_xrefs":["Orphanet:276556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"hyperinsulinism due to UCP2 deficiency","secondary_identifiers":["SCTID:721834007","GARD:21054","UMLS:C4303082","MEDGEN:928751"],"synonyms":[{"name":"hyperinsulinemic hypoglycemia due to UCP2 deficiency","type":"exact"}],"termid":"MONDO:0017183","xrefs":{"Monarch":{"xref_id":"0017183"}}}


id: GO:0048646
data:
  {"annotated_genes":["SJAG_00514","SJAG_04868","SJAG_04275","SJAG_01894","SJAG_04271","SJAG_04781","SJAG_02989","SJAG_03013","SJAG_00405","SJAG_02169","SJAG_00971","SJAG_01531","SJAG_03688","SJAG_02379","SJAG_02718","SJAG_00993","SJAG_00826","SJAG_02864","SJAG_04615","SJAG_04509","SJAG_00663","SJAG_04080","SJAG_02712","SJAG_01662","SJAG_01943","SJAG_04922","SJAG_00114","SJAG_01769","SJAG_01321","SJAG_05309","SJAG_00486","SJAG_02248","SJAG_01794","SJAG_00974","SJAG_01993","SJAG_03090","SJAG_01483","SJAG_04140","SJAG_03915","SJAG_03746","SJAG_04470","SJAG_04184","SJAG_02736","SJAG_04010","SJAG_03587","SJAG_04853","SJAG_04859","SJAG_01017","SJAG_00821","SJAG_02529","SJAG_02700","SJAG_03453","SJAG_02241","SJAG_03057","SJAG_02320","SJAG_04236","SJAG_03250","SJAG_03536","SJAG_04901","SJAG_03483","SJAG_04238","SJAG_04483","SJAG_03557"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104884,111258,112456,96694,96275,100484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[93780,111064],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[94223],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[88464,91533,87972,90010],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[72795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[103924,117532,113824,108824,117524],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[91264,104736,72796],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031321"},{"annotations":[91054,98587,101463,105050,109865,118575,95129,99662,118274,97308,97345,107137,113673,118757],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[106590,102670,113674,92055,99595,97309,96627,103882,99594,107470],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[114063,88019,98657,92277,98739,98045],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[110948],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[102042],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[90491],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[90611,87657,89628,93246,111113],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902917"},{"annotations":[91952],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[116671],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[94264,99596,99877,99597,105773,115714],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:tb","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02379":null,"SJAG_02529":null,"SJAG_02700":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_02736":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03453":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure formation involved in morphogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"formation of an anatomical structure involved in morphogenesis","type":"exact"}],"termid":"GO:0048646","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:1902917":null,"GO:1903023":null,"GO:1903024":null,"GO:1904600":null}}


id: PBO:0039878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 35","termid":"PBO:0039878"}


id: GO:0045100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A type of intermediate filament.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete desmin (obsolete GO:0045100)","synonyms":[{"name":"desmin","type":"exact"}],"termid":"GO:0045100"}


id: MONDO:0019506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obesity-colitis-hypothyroidism-cardiac hypertrophy-developmental delay syndrome is characterized by precocious obesity, congenital hypothyroidism, neonatal colitis, cardiac hypertrophy, craniosynostosis and developmental delay. It has been described in two brothers, one of whom died within the first month of life. The parents of the two children were nonconsanguineous and in good health, however, the pregnancies were complicated by a maternal HELLP syndrome (Haemolysis, Elevated Liver enzymes and Low Platelets). The mode of inheritance has not yet been clearly established.","definition_xrefs":["Orphanet:88643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity-colitis-hypothyroidism-cardiac hypertrophy-developmental delay syndrome","secondary_identifiers":["MEDGEN:928548","GARD:19092","SCTID:722051004","UMLS:C4302879"],"termid":"MONDO:0019506","xrefs":{"Monarch":{"xref_id":"0019506"}}}


id: PBO:0090304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Sti1","termid":"PBO:0090304"}


id: PBO:0067782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 84","termid":"PBO:0067782"}


id: MONDO:0018124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oncogenic osteomalacia is characterized by the development of a tumor that causes the bones to be weakened. This occurs when a tumor secretes a substance called fibroblast growth factor 23 (FGF23). FGF23 inhibits the ability of the kidneys to absorb phosphate. Phosphate is important for keeping bones strong and healthy. Therefore, this disease is characterized by a softening and weakening of the bones (osteomalacia). The disease also results in multiple biochemical abnormalities including high levels of phosphate in the urine (hyperphosphaturia) and low levels of phosphate in the blood (hypophosphatemia). The majority of tumors that cause oncogenic osteomalacia are small and slow-growing. These tumors most commonly occur in the skin, muscles, or bones of the extremities or in the paranasal sinuses around the head. Most of these tumors are benign, meaning they are not associated with cancer. The exact reason that the tumors associated with oncogenic osteomalacia develop is not known. The disease is diagnosed when a person experiences clinical features such as bone weakening and hyperphosphaturia and a tumor is found by imaging of the body. Treatment of the disease consists of surgical removal of the tumor. The symptoms of the disease, including the weakening of the bones, typically resolve once the tumor is removed.","direct_ancestors":[{"relation_name":"is_a","term_name":"osteomalacia","termid":"MONDO:0001068"},{"relation_name":"is_a","term_name":"parneoplastic endocrine syndrome","termid":"MONDO:0700252"},{"relation_name":"is_a","term_name":"paraneoplastic renal syndrome","termid":"MONDO:0700255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oncogenic osteomalacia","secondary_identifiers":["NCIT:C67235","GARD:9652","UMLS:C1274103","MESH:C537751","MEDGEN:226893","SCTID:392559009","Orphanet:352540"],"synonyms":[{"name":"OO","type":"related"},{"name":"OOM","type":"related"},{"name":"Oncogenic hypophosphatemic osteomalacia","type":"exact"},{"name":"TIO","type":"exact"},{"name":"tumor-induced osteomalacia","type":"exact"}],"termid":"MONDO:0018124","xrefs":{"Monarch":{"xref_id":"0018124"}}}


id: GO:0034788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxy-2'-carboxybiphenyl + O2 = 2-hydroxy-6-oxo-6-(2-carboxyphenyl)-hexa-2,4-dienoate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-dihydroxy-2'-carboxybiphenyl 1,2-dioxygenase activity (obsolete GO:0034788)","termid":"GO:0034788"}


id: MONDO:1010685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in white-tufted-ear marmoset.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, white-tufted-ear marmoset","secondary_identifiers":["OMIA:000038-9483"],"termid":"MONDO:1010685","xrefs":{"Monarch":{"xref_id":"1010685"}}}


id: GO:0039641
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer of a virion contained inside the protein capsid.","definition_xrefs":["PMID:15331712","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral membrane","termid":"GO:0036338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral inner membrane","synonyms":[{"name":"virion inner membrane","type":"exact"}],"termid":"GO:0039641"}


id: GO:0061515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a myeloid cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell development","termid":"GO:0061515"}


id: GO:0035046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the male and female pronuclei towards each other prior to their fusion.","definition_xrefs":["GOC:bf","PMID:9199363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pronuclear migration","termid":"GO:0035046"}


id: MONDO:1010275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, non-human animal","secondary_identifiers":["OMIA:000243"],"termid":"MONDO:1010275","xrefs":{"Monarch":{"xref_id":"1010275"}}}


id: GO:0050452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glutathione + NADP+ = CoA-glutathione + NADPH + H+.","definition_xrefs":["RHEA:14617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"CoA-glutathione reductase (NADPH) activity","secondary_identifiers":["EC:1.8.1.10","MetaCyc:COA-GLUTATHIONE-REDUCTASE-NADPH-RXN"],"synonyms":[{"name":"CoA-glutathione reductase (NADP) activity","type":"exact"},{"name":"CoA-glutathione reductase activity","type":"broad"},{"name":"NADPH-dependent coenzyme A-SS-glutathione reductase activity","type":"exact"},{"name":"NADPH:CoA-glutathione oxidoreductase activity","type":"exact"},{"name":"coenzyme A disulfide-glutathione reductase activity","type":"broad"},{"name":"coenzyme A glutathione disulfide reductase activity","type":"broad"},{"name":"glutathione:NADP+ oxidoreductase (CoA-acylating)","type":"exact"}],"termid":"GO:0050452"}


id: PBO:0043440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2","termid":"PBO:0043440"}


id: PBO:0077469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 190","termid":"PBO:0077469"}


id: GO:0048105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Orientation of body hairs, projections from the surface of an organism, such that the hairs all point in a uniform direction along the surface.","definition_xrefs":["GOC:tb","GOC:jid","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of body hair or bristle planar orientation","termid":"GO:0048104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of body hair planar orientation","termid":"GO:0048105"}


id: MOD:01426
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms an adduct with a particular isotope labeled compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}


id: PBO:0045014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disco interacting protein 2 homolog C","termid":"PBO:0045014"}


id: PBO:0027219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_monomeric_ribosome_level","termid":"PBO:0027219"}


id: GO:0004103
data:
  {"annotated_genes":["SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73350],"is_not":false,"summary":null,"term":"GO:0004103"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + choline = ADP + choline phosphate + 2 H+.","definition_xrefs":["EC:2.7.1.32","RHEA:12837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"choline kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1483004","KEGG_REACTION:R01021","MetaCyc:CHOLINE-KINASE-RXN"],"synonyms":[{"name":"ATP:choline phosphotransferase activity","type":"related"},{"name":"choline kinase (phosphorylating)","type":"related"},{"name":"choline phosphokinase activity","type":"related"},{"name":"choline-ethanolamine kinase activity","type":"related"}],"termid":"GO:0004103","terms_by_termid":{"GO:0004103":null}}


id: PBO:0087462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a kinetochore-microtubule binding complex; complex bridges centromeric heterochromatin and kinetochore MAPs and motors; required for sister chromatid bi-orientation and kinetochore binding of SAC components; complex also includes Kre28p; modified by sumoylation","termid":"PBO:0087462"}


id: GO:1903324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of snoRNA metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of snoRNA metabolic process","termid":"GO:1903323"},{"relation_name":"negatively_regulates","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016074"},{"rel_name":"negatively_regulates","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0008150"],"is_obsolete":false,"name":"negative regulation of snoRNA metabolic process","synonyms":[{"name":"down regulation of snoRNA metabolic process","type":"exact"},{"name":"down regulation of snoRNA metabolism","type":"exact"},{"name":"down-regulation of snoRNA metabolic process","type":"exact"},{"name":"down-regulation of snoRNA metabolism","type":"exact"},{"name":"downregulation of snoRNA metabolic process","type":"exact"},{"name":"downregulation of snoRNA metabolism","type":"exact"},{"name":"inhibition of snoRNA metabolic process","type":"narrow"},{"name":"inhibition of snoRNA metabolism","type":"narrow"},{"name":"negative regulation of snoRNA metabolism","type":"exact"}],"termid":"GO:1903324"}


id: PBO:0044506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 2","termid":"PBO:0044506"}


id: PBO:0069642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 919, pseudogene","termid":"PBO:0069642"}


id: FYPO:0006999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to a specific place in the cell shows a normal (i.e. indistinguishable from wild type) temporal pattern of localization. For example, a protein may move to or from the location more or less frequently than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal dynamic protein localization pattern","synonyms":[{"name":"normal dynamic pattern of protein localization","type":"exact"},{"name":"normal dynamic protein localisation pattern","type":"exact"},{"name":"normal temporal protein localization pattern","type":"related"}],"termid":"FYPO:0006999"}


id: FYPO:0007427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of the old spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the nucleus. The old SPB may be transiently inserted into the nuclear envelope but does not remain in place as normal.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:19487457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","termid":"FYPO:0003568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm","synonyms":[{"name":"abnormal establishment of old mitotic spindle pole body localization to nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal old mitotic SPB insertion into nuclear envelope, with spindle pole body in nucleoplasm","type":"exact"},{"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal old mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0007427"}


id: RO:HOM0000037
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves a structure that has no other homologs in the species in which it is defined, and several homologous structures in another species.","definition_xrefs":["BGEE:curator"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_many_homology_relationship_with","synonyms":[{"name":"1 to many homologous to","type":"exact"},{"name":"1:many homology","type":"related"},{"name":"one-to-many homology","type":"exact"}],"termid":"RO:HOM0000037"}


id: MONDO:0010687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis","termid":"MONDO:0008171"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrolithiasis, X-linked recessive, with renal failure","secondary_identifiers":["OMIM:310468","UMLS:C0403720","SCTID:236713006","GARD:15305","DOID:0111798","MESH:C562901","MEDGEN:96047"],"synonyms":[{"name":"XRN","type":"related"},{"name":"nephrolithiasis 1","type":"related"},{"name":"nephrolithiasis, X-linked recessive, type 1","type":"related"},{"name":"nephrolithiasis, X-linked recessive, with renal failure","type":"exact"},{"name":"nephrolithiasis, type i, X-linked recessive","type":"exact"},{"name":"urolithiasis, X-linked recessive, type 1","type":"related"}],"termid":"MONDO:0010687","xrefs":{"Monarch":{"xref_id":"0010687"}}}


id: GO:0140303
data:
  {"annotated_genes":["SJAG_02581","SJAG_00589","SJAG_01470","SJAG_00587","SJAG_02897","SJAG_00018","SJAG_01731","SJAG_03050","SJAG_02957","SJAG_02943","SJAG_05209","SJAG_01945","SJAG_03100","SJAG_01095","SJAG_03076","SJAG_02114","SJAG_02132","SJAG_03774","SJAG_00669","SJAG_02516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90299,90302,90304,90303,102090,104845,90298,90301,90305,90300,90306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140326"},{"annotations":[112304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034202"},{"annotations":[94187,97685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[99239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[94189,97687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[94190,99955,97688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[99956,94191,112245,99241,97689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[112247,99242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[112248,101172,99243,94192,97690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"},{"annotations":[103345,72959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017128"}]},"cv_name":"molecular_function","definition":"Enables the transport of a lipid from a region of a membrane to a different region on the same membrane.","definition_xrefs":["PMID:16828084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03076":null,"SJAG_03100":null,"SJAG_03774":null,"SJAG_05209":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intramembrane lipid transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"flippase activity","type":"related"},{"name":"translocase activity","type":"broad"}],"termid":"GO:0140303","terms_by_termid":{"GO:0017128":null,"GO:0034202":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0140326":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0180013":null}}


id: GO:0046798
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric ring of proteins through which the DNA enters and exits the viral capsid.","definition_xrefs":["PMID:11602732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"viral portal complex","termid":"GO:0046798"}


id: PBO:0056281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2C member 1","termid":"PBO:0056281"}


id: PBO:0044705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX5 pseudogene 1","termid":"PBO:0044705"}


id: GO:0061207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerular apparatus development","termid":"GO:0061212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerulus cell differentiation","termid":"GO:0061207"}


id: GO:0046440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid, i.e. (2S)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine metabolic process","termid":"GO:0006553"},{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-lysine metabolic process","synonyms":[{"name":"L-lysine metabolism","type":"exact"}],"termid":"GO:0046440"}


id: GO:0060676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the ureteric bud from the Wolffian duct. This process begins when the bud protrudes from the duct and ends when it is a recognizable bud.","definition_xrefs":["GOC:dph","PMID:16916378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule formation","termid":"GO:0072172"},{"relation_name":"part_of","term_name":"ureteric bud morphogenesis","termid":"GO:0060675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud formation","secondary_identifiers":["Reactome:R-HSA-9830674"],"termid":"GO:0060676"}


id: PBO:0087925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that regulates the pleiotropic drug response; zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins to pleiotropic drug response elements (PDREs) to fine tune the regulation of multidrug resistance genes; relocalizes to the cytosol in response to hypoxia; PDR1 has a paralog, PDR3, that arose from the whole genome duplication","termid":"PBO:0087925"}


id: PBO:0062811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 2","termid":"PBO:0062811"}


id: GO:1904811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dense core granule transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22699897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of dense core granule transport","termid":"GO:1904809"},{"relation_name":"positively_regulates","term_name":"dense core granule transport","termid":"GO:1901950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dense core granule transport","synonyms":[{"name":"activation of dense core granule transport","type":"narrow"},{"name":"activation of dense core vesicle transport","type":"narrow"},{"name":"positive regulation of dense core vesicle transport","type":"exact"},{"name":"up regulation of dense core granule transport","type":"exact"},{"name":"up regulation of dense core vesicle transport","type":"exact"},{"name":"up-regulation of dense core granule transport","type":"exact"},{"name":"up-regulation of dense core vesicle transport","type":"exact"},{"name":"upregulation of dense core granule transport","type":"exact"},{"name":"upregulation of dense core vesicle transport","type":"exact"}],"termid":"GO:1904811"}


id: GO:1905633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in an euchromatin.","definition_xrefs":["PMID:20889714","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to chromatin","termid":"GO:0071169"},{"relation_name":"is_a","term_name":"protein localization to euchromatin","termid":"GO:1905632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to euchromatin","synonyms":[{"name":"establishment of protein localisation in euchromatin","type":"exact"},{"name":"establishment of protein localisation to euchromatin","type":"exact"},{"name":"establishment of protein localization in euchromatin","type":"exact"}],"termid":"GO:1905633"}


id: PR:Q9USN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transducin beta-like protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04481","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.02","secondary_identifiers":["UniProtKB:Q9USN3"],"synonyms":[{"name":"Spom972h-TBL3","type":"exact"},{"name":"U3 snoRNA-associated protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USN3"}


id: PBO:0042545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 10","termid":"PBO:0042545"}


id: GO:0034403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Recognition of both the 5' and 3'-splice sites and positioning them in the correct alignment with respect to each other so that the second catalytic step of nuclear mRNA splicing can occur.","definition_xrefs":["GOC:krc","PMID:9430647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-splice site recognition","termid":"GO:0000389"},{"relation_name":"is_a","term_name":"mRNA 5'-splice site recognition","termid":"GO:0000395"},{"relation_name":"part_of","term_name":"generation of catalytic spliceosome for second transesterification step","termid":"GO:0000350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"alignment of 3' and 5' splice sites of mRNA","synonyms":[{"name":"alignment of 3' and 5' splice sites of nuclear mRNA","type":"exact"}],"termid":"GO:0034403"}


id: PBO:0073519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 1","termid":"PBO:0073519"}


id: GO:0050748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein metabolic process","synonyms":[{"name":"down regulation of lipoprotein metabolic process","type":"exact"},{"name":"down-regulation of lipoprotein metabolic process","type":"exact"},{"name":"downregulation of lipoprotein metabolic process","type":"exact"},{"name":"inhibition of lipoprotein metabolic process","type":"narrow"},{"name":"negative regulation of lipoprotein metabolism","type":"exact"}],"termid":"GO:0050748"}


id: MONDO:0009837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Papilloma of the choroid plexus is a rare benign type of choroid plexus tumor, accounting for 1% of all brain tumors, often occurring in the fourth ventricle (in adults) and the lateral ventricle (in children) but sometimes arising ectopically in the brain parenchyma, and presenting with nausea, vomiting, papilledema, abnormal eye movements, as well as enlarged head circumference, seizures and gait impairment due to an increase in intracranial pressure.","definition_xrefs":["Orphanet:2807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"},{"relation_name":"is_a","term_name":"benign choroid plexus neoplasm","termid":"MONDO:0044764"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroid plexus papilloma","secondary_identifiers":["SCTID:425868004","GARD:4214","MESH:D020288","OMIM:260500","icd11.foundation:1696749652","ONCOTREE:CPP","MEDGEN:64439","NANDO:2200093","UMLS:C0205770","ICDO:9390/0","DOID:2626","NCIT:C3698","MedDRA:10008777"],"synonyms":[{"name":"CPP","type":"related"},{"name":"childhood choroid plexus papilloma","type":"narrow"},{"name":"childhood papilloma of choroid plexus","type":"narrow"},{"name":"choroid plexus carcinoma","type":"related"},{"name":"choroid plexus papilloma","type":"exact"},{"name":"choroid plexus papilloma NOS (morphologic abnormality)","type":"narrow"},{"name":"choroid plexus papilloma, no ICD-O subtype","type":"exact"},{"name":"paediatric papilloma of choroid plexus","type":"narrow"},{"name":"papilloma of choroid plexus","type":"related"},{"name":"papilloma of the choroid plexus","type":"exact"},{"name":"papilloma, choroid plexus, benign","type":"related"},{"name":"pediatric papilloma of choroid plexus","type":"narrow"}],"termid":"MONDO:0009837","xrefs":{"Monarch":{"xref_id":"0009837"}}}


id: PATO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A distribution which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased position","termid":"PATO:0001476"},{"relation_name":"is_a","term_name":"distributed","termid":"PATO:0001566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased distribution","synonyms":[{"name":"low distribution","type":"exact"}],"termid":"PATO:0001672"}


id: PBO:0043693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5A pseudogene 2","termid":"PBO:0043693"}


id: PR:P36602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase large subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA","PMID:14648198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase large chain (Schizosaccharomyces pombe)","termid":"PR:000036298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase large chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.05","secondary_identifiers":["UniProtKB:P36602","PR:000027719"],"synonyms":[{"name":"Spom972h-cdc22","type":"exact"}],"termid":"PR:P36602"}


id: PBO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific 5Tm protein family","termid":"PBO:0000080"}


id: FYPO:0005760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which cells adhere to each other more strongly or to a greater extent than normal.","definition_xrefs":["GO:0098610","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased cell-cell adhesion","synonyms":[{"name":"increased adhesion between unicellular organisms","type":"exact"},{"name":"increased cell-cell adhesion during mitotic cell cycle","type":"related"},{"name":"increased cell-cell adhesion during vegetative growth","type":"exact"}],"termid":"FYPO:0005760"}


id: PBO:0048510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 11","termid":"PBO:0048510"}


id: MONDO:0003735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of teratoma composed of incompletely differentiated components resembling fetal tissues. Even if the immature component is only a minor element of an otherwise differentiated teratoma, the tumor is still classified as immature. (Adapted from WHO)","definition_xrefs":["NCIT:C7014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system teratoma","termid":"MONDO:0002718"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system immature teratoma","secondary_identifiers":["UMLS:C1332883","DOID:6019","MEDGEN:272442","ONCOTREE:BIMT"],"synonyms":[{"name":"CNS immature teratoma","type":"exact"},{"name":"central nervous system immature teratoma","type":"exact"},{"name":"immature teratoma","type":"related"},{"name":"immature teratoma of CNS","type":"exact"},{"name":"immature teratoma of central nervous system","type":"exact"},{"name":"immature teratoma of the CNS","type":"exact"},{"name":"immature teratoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003735","xrefs":{"Monarch":{"xref_id":"0003735"}}}


id: PBO:0047530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 4","termid":"PBO:0047530"}


id: PBO:0114426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC6 antisense RNA 1","termid":"PBO:0114426"}


id: MONDO:0004488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenomyoma that arises from the cervix and is characterized by the presence of a glandular component exhibiting architectural complexity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenomyoma","termid":"MONDO:0003238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical atypical polypoid adenomyoma","secondary_identifiers":["MEDGEN:273123","NCIT:C40234","UMLS:C1516409","DOID:8179"],"termid":"MONDO:0004488","xrefs":{"Monarch":{"xref_id":"0004488"}}}


id: PBO:0063360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer expressed EZH2 associated transcript","termid":"PBO:0063360"}


id: GO:0034948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dihydroxypseudooxynicotine + H2O = 2,6-dihydroxypyridine + 4-methylaminobutyrate.","definition_xrefs":["UM-BBD_reactionID:r0482"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dihydroxypseudooxynicotine hydrolase activity (obsolete GO:0034948)","termid":"GO:0034948"}


id: PBO:0054290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1681","termid":"PBO:0054290"}


id: PBO:0028853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_UV","termid":"PBO:0028853"}


id: GO:1900492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:mengo_curators","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [4Fe-4S] cluster assembly","termid":"GO:1900491"},{"relation_name":"is_a","term_name":"negative regulation of iron-sulfur cluster assembly","termid":"GO:1903330"},{"relation_name":"negatively_regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"down regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"down-regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"downregulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"inhibition of 4Fe-4S cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"negative regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"negative regulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900492"}


id: PBO:0078560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 48","termid":"PBO:0078560"}


id: GO:1900263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA-directed DNA polymerase activity (obsolete GO:1900263)","synonyms":[{"name":"down regulation of DNA duplicase activity","type":"exact"},{"name":"down regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down regulation of DNA polymerase I","type":"narrow"},{"name":"down regulation of DNA polymerase II","type":"narrow"},{"name":"down regulation of DNA polymerase III","type":"narrow"},{"name":"down regulation of DNA polymerase V activity","type":"narrow"},{"name":"down regulation of DNA polymerase alpha","type":"narrow"},{"name":"down regulation of DNA polymerase beta","type":"narrow"},{"name":"down regulation of DNA polymerase gamma","type":"narrow"},{"name":"down regulation of DNA replicase activity","type":"exact"},{"name":"down regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"down regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"down regulation of Klenow fragment","type":"narrow"},{"name":"down regulation of Taq DNA polymerase","type":"narrow"},{"name":"down regulation of Taq Pol I","type":"narrow"},{"name":"down regulation of Tca DNA polymerase","type":"narrow"},{"name":"down regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"down regulation of beta DNA polymerase activity","type":"narrow"},{"name":"down regulation of delta DNA polymerase activity","type":"narrow"},{"name":"down regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"down regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"down regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"down regulation of duplicase","type":"broad"},{"name":"down regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"down regulation of eta DNA polymerase activity","type":"narrow"},{"name":"down regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"down regulation of iota DNA polymerase activity","type":"narrow"},{"name":"down regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"down regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"down regulation of mu DNA polymerase activity","type":"narrow"},{"name":"down regulation of nu DNA polymerase activity","type":"narrow"},{"name":"down regulation of sequenase","type":"related"},{"name":"down regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"down regulation of theta DNA polymerase activity","type":"narrow"},{"name":"down regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of DNA duplicase activity","type":"exact"},{"name":"down-regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down-regulation of DNA polymerase I","type":"narrow"},{"name":"down-regulation of DNA polymerase II","type":"narrow"},{"name":"down-regulation of DNA polymerase III","type":"narrow"},{"name":"down-regulation of DNA polymerase V activity","type":"narrow"},{"name":"down-regulation of DNA polymerase alpha","type":"narrow"},{"name":"down-regulation of DNA polymerase beta","type":"narrow"},{"name":"down-regulation of DNA polymerase gamma","type":"narrow"},{"name":"down-regulation of DNA replicase activity","type":"exact"},{"name":"down-regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"down-regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"down-regulation of Klenow fragment","type":"narrow"},{"name":"down-regulation of Taq DNA polymerase","type":"narrow"},{"name":"down-regulation of Taq Pol I","type":"narrow"},{"name":"down-regulation of Tca DNA polymerase","type":"narrow"},{"name":"down-regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"down-regulation of beta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of delta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"down-regulation of duplicase","type":"broad"},{"name":"down-regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"down-regulation of eta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"down-regulation of iota DNA polymerase activity","type":"narrow"},{"name":"down-regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"down-regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"down-regulation of mu DNA polymerase activity","type":"narrow"},{"name":"down-regulation of nu DNA polymerase activity","type":"narrow"},{"name":"down-regulation of sequenase","type":"related"},{"name":"down-regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"down-regulation of theta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"downregulation of DNA duplicase activity","type":"exact"},{"name":"downregulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"downregulation of DNA polymerase I","type":"narrow"},{"name":"downregulation of DNA polymerase II","type":"narrow"},{"name":"downregulation of DNA polymerase III","type":"narrow"},{"name":"downregulation of DNA polymerase V activity","type":"narrow"},{"name":"downregulation of DNA polymerase alpha","type":"narrow"},{"name":"downregulation of DNA polymerase beta","type":"narrow"},{"name":"downregulation of DNA polymerase gamma","type":"narrow"},{"name":"downregulation of DNA replicase activity","type":"exact"},{"name":"downregulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"downregulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"downregulation of Klenow fragment","type":"narrow"},{"name":"downregulation of Taq DNA polymerase","type":"narrow"},{"name":"downregulation of Taq Pol I","type":"narrow"},{"name":"downregulation of Tca DNA polymerase","type":"narrow"},{"name":"downregulation of alpha DNA polymerase activity","type":"narrow"},{"name":"downregulation of beta DNA polymerase activity","type":"narrow"},{"name":"downregulation of delta DNA polymerase activity","type":"narrow"},{"name":"downregulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"downregulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"downregulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"downregulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"downregulation of duplicase","type":"broad"},{"name":"downregulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"downregulation of eta DNA polymerase activity","type":"narrow"},{"name":"downregulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"downregulation of iota DNA polymerase activity","type":"narrow"},{"name":"downregulation of kappa DNA polymerase activity","type":"narrow"},{"name":"downregulation of lambda DNA polymerase activity","type":"narrow"},{"name":"downregulation of mu DNA polymerase activity","type":"narrow"},{"name":"downregulation of nu DNA polymerase activity","type":"narrow"},{"name":"downregulation of sequenase","type":"related"},{"name":"downregulation of sigma DNA polymerase activity","type":"narrow"},{"name":"downregulation of theta DNA polymerase activity","type":"narrow"},{"name":"downregulation of zeta DNA polymerase activity","type":"narrow"},{"name":"inhibition of DNA duplicase activity","type":"exact"},{"name":"inhibition of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"inhibition of DNA polymerase I","type":"narrow"},{"name":"inhibition of DNA polymerase II","type":"narrow"},{"name":"inhibition of DNA polymerase III","type":"narrow"},{"name":"inhibition of DNA polymerase V activity","type":"narrow"},{"name":"inhibition of DNA polymerase alpha","type":"narrow"},{"name":"inhibition of DNA polymerase beta","type":"narrow"},{"name":"inhibition of DNA polymerase gamma","type":"narrow"},{"name":"inhibition of DNA replicase activity","type":"exact"},{"name":"inhibition of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"inhibition of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"inhibition of Klenow fragment","type":"narrow"},{"name":"inhibition of Taq DNA polymerase","type":"narrow"},{"name":"inhibition of Taq Pol I","type":"narrow"},{"name":"inhibition of Tca DNA polymerase","type":"narrow"},{"name":"inhibition of alpha DNA polymerase activity","type":"narrow"},{"name":"inhibition of beta DNA polymerase activity","type":"narrow"},{"name":"inhibition of delta DNA polymerase activity","type":"narrow"},{"name":"inhibition of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"inhibition of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"inhibition of deoxyribonucleic duplicase activity","type":"exact"},{"name":"inhibition of deoxyribonucleic polymerase I","type":"narrow"},{"name":"inhibition of duplicase","type":"broad"},{"name":"inhibition of epsilon DNA polymerase activity","type":"narrow"},{"name":"inhibition of eta DNA polymerase activity","type":"narrow"},{"name":"inhibition of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"inhibition of iota DNA polymerase activity","type":"narrow"},{"name":"inhibition of kappa DNA polymerase activity","type":"narrow"},{"name":"inhibition of lambda DNA polymerase activity","type":"narrow"},{"name":"inhibition of mu DNA polymerase activity","type":"narrow"},{"name":"inhibition of nu DNA polymerase activity","type":"narrow"},{"name":"inhibition of sequenase","type":"related"},{"name":"inhibition of sigma DNA polymerase activity","type":"narrow"},{"name":"inhibition of theta DNA polymerase activity","type":"narrow"},{"name":"inhibition of zeta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of DNA duplicase activity","type":"exact"},{"name":"negative regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"negative regulation of DNA polymerase I","type":"narrow"},{"name":"negative regulation of DNA polymerase II","type":"narrow"},{"name":"negative regulation of DNA polymerase III","type":"narrow"},{"name":"negative regulation of DNA polymerase V activity","type":"narrow"},{"name":"negative regulation of DNA polymerase alpha","type":"narrow"},{"name":"negative regulation of DNA polymerase beta","type":"narrow"},{"name":"negative regulation of DNA polymerase gamma","type":"narrow"},{"name":"negative regulation of DNA replicase activity","type":"exact"},{"name":"negative regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"negative regulation of Klenow fragment","type":"narrow"},{"name":"negative regulation of Taq DNA polymerase","type":"narrow"},{"name":"negative regulation of Taq Pol I","type":"narrow"},{"name":"negative regulation of Tca DNA polymerase","type":"narrow"},{"name":"negative regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"negative regulation of beta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of delta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"negative regulation of duplicase","type":"broad"},{"name":"negative regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"negative regulation of eta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"negative regulation of iota DNA polymerase activity","type":"narrow"},{"name":"negative regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"negative regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"negative regulation of mu DNA polymerase activity","type":"narrow"},{"name":"negative regulation of nu DNA polymerase activity","type":"narrow"},{"name":"negative regulation of sequenase","type":"related"},{"name":"negative regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"negative regulation of theta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900263"}


id: GO:0072484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about spindle assembly is received and converted into a molecular signal, contributing to a spindle assembly checkpoint.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in spindle assembly checkpoint (obsolete GO:0072484)","synonyms":[{"name":"sensing involved in spindle assembly checkpoint","type":"related"},{"name":"spindle assembly checkpoint sensor mechanism","type":"related"},{"name":"spindle assembly checkpoint sensor process","type":"related"}],"termid":"GO:0072484"}


id: PATO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being entwined and difficult to unravel.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tangled","termid":"PATO:0001846"}


id: PBO:0071088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 90","termid":"PBO:0071088"}


id: MONDO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ocular albinism with congenital sensorineural hearing loss (obsolete MONDO:0018138)","secondary_identifiers":["DOID:0090100","Orphanet:352740","OMIM:103470"],"synonyms":[{"name":"WS2-OA","type":"exact"},{"name":"Waardenburg syndrome type 2 with ocular albinism","type":"exact"},{"name":"Waardenburg syndrome, type 2, with ocular albinism, autosomal recessive","type":"related"},{"name":"Waardenburg syndrome/albinism, digenic","type":"exact"},{"name":"Waardenburg syndrome/ocular albinism, digenic","type":"exact"},{"name":"albinism, ocular, with sensorineural deafness","type":"narrow"},{"name":"autosomal recessive Waardenburg syndrome type 2 with ocular albinism","type":"exact"},{"name":"digenic Waardenburg syndrome/albinism","type":"exact"},{"name":"digenic Waardenburg syndrome/ocular albinism","type":"exact"},{"name":"ocular albinism with congenital sensorineural deafness","type":"narrow"},{"name":"ocular albinism with sensorineural deafness","type":"narrow"}],"termid":"MONDO:0018138","xrefs":{"Monarch":{"xref_id":"0018138"}}}


id: MONDO:0060760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with dysmorphic facies and behavioral abnormalities","secondary_identifiers":["UMLS:C4748135","OMIM:618089","MEDGEN:1648498"],"synonyms":[{"name":"IDDFBA","type":"related"},{"name":"INTELLECTUAL developmental disorder with DYSMORPHIC facies and behavioral abnormalities","type":"related"},{"name":"INTELLECTUAL developmental disorder with DYSMORPHIC facies and behavioural abnormalities","type":"related"}],"termid":"MONDO:0060760","xrefs":{"Monarch":{"xref_id":"0060760"}}}


id: GO:1903797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11336802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"positively_regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of inorganic anion transmembrane transport","synonyms":[{"name":"activation of inorganic anion membrane transport","type":"narrow"},{"name":"activation of inorganic anion transmembrane transport","type":"narrow"},{"name":"activation of transmembrane inorganic anion transport","type":"narrow"},{"name":"positive regulation of inorganic anion membrane transport","type":"exact"},{"name":"positive regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"up regulation of inorganic anion membrane transport","type":"exact"},{"name":"up regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"up regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"up-regulation of inorganic anion membrane transport","type":"exact"},{"name":"up-regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"up-regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"upregulation of inorganic anion membrane transport","type":"exact"},{"name":"upregulation of inorganic anion transmembrane transport","type":"exact"},{"name":"upregulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903797"}


id: PBO:0041566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 96","termid":"PBO:0041566"}


id: GO:1902835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proline import into cell.","definition_xrefs":["PMID:24344203","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of proline import across plasma membrane","termid":"GO:1902834"},{"relation_name":"negatively_regulates","term_name":"proline import across plasma membrane","termid":"GO:1905647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of proline import across plasma membrane","synonyms":[{"name":"down regulation of proline import into cell","type":"exact"},{"name":"down-regulation of proline import into cell","type":"exact"},{"name":"downregulation of proline import into cell","type":"exact"},{"name":"inhibition of proline import into cell","type":"narrow"},{"name":"negative regulation of proline import into cell","type":"exact"}],"termid":"GO:1902835"}


id: PBO:0029185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_6-phosphate_level","termid":"PBO:0029185"}


id: GO:0032324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor biosynthetic process","secondary_identifiers":["Reactome:R-HSA-947581","MetaCyc:Molybdenum-Cofactor-Biosynthesis"],"synonyms":[{"name":"molybdopterin cofactor anabolism","type":"exact"},{"name":"molybdopterin cofactor biosynthesis","type":"related"},{"name":"molybdopterin cofactor formation","type":"related"},{"name":"molybdopterin cofactor synthesis","type":"exact"}],"termid":"GO:0032324"}


id: GO:0048885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a migrating neuromast primordium deposits clusters of undifferentiated cells (proneuromasts) along its migratory path in a developing lateral line.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast deposition","termid":"GO:0048885"}


id: PBO:0047652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 8","termid":"PBO:0047652"}


id: PBO:0030069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_asparagine_import","termid":"PBO:0030069"}


id: PR:P0CF96
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mzt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CF96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic-spindle organizing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.15c","synonyms":[{"name":"Spom972h-mzt1","type":"exact"},{"name":"mitotic-spindle organizing protein associated with a ring of gamma-tubulin 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcripts altered in meiosis protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CF96"}


id: PBO:0087408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-specific adaptor protein involved in apo-Rli1p maturation; subunit of the Yae1-Lto1 complex, recruiting apo-Rli1p to the CIA targeting complex, facilitating the insertion of an Fe/S cluster by the Fe-S biosynthetic machinery; deca-GX3 motif crucial for complex formation; essential for aerobic but not anaerobic growth; homolog of human ORAOV1, which is overexpressed in solid tumors; co-expression of ORAOV1 and YAE1 homolog YAE1D1 restores growth and Rli1p maturation after LTO1 depletion","termid":"PBO:0087408"}


id: PBO:0069432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 697, pseudogene","termid":"PBO:0069432"}


id: MONDO:0018747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa acquisita (EBA) is a subepidermal bullous dermatosis of autoimmune origin that was named as a result of its resemblance to hereditary forms of epidermolysis bullosa (HEB), most notably dystrophic HEB.","definition_xrefs":["Orphanet:46487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa","termid":"MONDO:0006541"},{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"acquired epidermolysis bullosa","secondary_identifiers":["DOID:4313","MEDGEN:37178","ICD10CM:L12.3","SCTID:2772003","GARD:6360","icd11.foundation:2034586329","MedDRA:10056508","NANDO:1200635","ICD9:695.19","MESH:D016107","NCIT:C84690","EFO:1000691","UMLS:C0079293"],"synonyms":[{"name":"EB acquisita","type":"related"},{"name":"EBA","type":"exact"},{"name":"acquired epidermolysis bullosa","type":"exact"},{"name":"epidermolysis bullosa Aquisita","type":"exact"},{"name":"epidermolysis bullosa acquisita","type":"exact"}],"termid":"MONDO:0018747","xrefs":{"Monarch":{"xref_id":"0018747"}}}


id: PBO:0083981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamate decarboxylase; converts glutamate into gamma-aminobutyric acid (GABA) during glutamate catabolism; involved in response to oxidative stress","termid":"PBO:0083981"}


id: PBO:0059518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2","termid":"PBO:0059518"}


id: PBO:0048078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain like 18, pseudogene","termid":"PBO:0048078"}


id: _global:removed_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is removed.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"removed_during","termid":"_global:removed_during"}


id: GO:1990075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane region adjacent to the base of eukaryotic cilia and flagella that is enriched in endocytosis-associated proteins and vesicles and that appears to regulate ciliary membrane homeostasis.","definition_xrefs":["GOC:cilia","PMID:22342749","GOC:dr","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"periciliary membrane compartment","synonyms":[{"name":"PCMC","type":"exact"}],"termid":"GO:1990075"}


id: GO:1900555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emericellamide.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"depsipeptide metabolic process","termid":"GO:0050761"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748","GO:0006629"],"is_obsolete":false,"name":"emericellamide metabolic process","synonyms":[{"name":"emericellamide metabolism","type":"exact"}],"termid":"GO:1900555"}


id: PBO:0059431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A2","termid":"PBO:0059431"}


id: MONDO:0041259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An myocarditis caused by infection with Corynebacterium diphtheriae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial myocarditis","termid":"MONDO:0001114"},{"relation_name":"is_a","term_name":"diphtheria","termid":"MONDO:0005504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"diphtheritic myocarditis","secondary_identifiers":["icd11.foundation:1165221541","MEDGEN:509091","SCTID:26117009","UMLS:C0152952"],"synonyms":[{"name":"Corynebacterium diphtheriae caused myocarditis","type":"exact"},{"name":"Corynebacterium diphtheriae myocarditis","type":"exact"},{"name":"diphtheritic myocarditis","type":"exact"}],"termid":"MONDO:0041259","xrefs":{"Monarch":{"xref_id":"0041259"}}}


id: GO:0016680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, NAD or NADP as acceptor","secondary_identifiers":["EC:1.10.1.-"],"termid":"GO:0016680"}


id: GO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell activation involved in immune response","synonyms":[{"name":"mast cell activation during immune response","type":"related"}],"termid":"GO:0002279"}


id: GO:2000390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil extravasation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil migration","termid":"GO:1902623"},{"relation_name":"is_a","term_name":"regulation of neutrophil extravasation","termid":"GO:2000389"},{"relation_name":"negatively_regulates","term_name":"neutrophil extravasation","termid":"GO:0072672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil extravasation","termid":"GO:2000390"}


id: PBO:0059549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Gln (CAA/G)","termid":"PBO:0059549"}


id: PBO:0080834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 2","termid":"PBO:0080834"}


id: PBO:0080235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vimentin type intermediate filament associated coiled-coil protein","termid":"PBO:0080235"}


id: PBO:0035701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_during_vegetative_growth","termid":"PBO:0035701"}


id: PBO:0051921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 4","termid":"PBO:0051921"}


id: MONDO:0016230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete simple vascular malformation (obsolete MONDO:0016230)","secondary_identifiers":["Orphanet:211243"],"termid":"MONDO:0016230","xrefs":{"Monarch":{"xref_id":"0016230"}}}


id: PBO:0016929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Aip1","termid":"PBO:0016929"}


id: PBO:0066762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 60","termid":"PBO:0066762"}


id: GO:0016330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A discrete cell cycle in the third instar eye imaginal disc after progression of the morphogenetic furrow that contributes to compound eye morphogenesis. It is essential for generation of a sufficient pool of uncommitted cells to develop complete ommatidia.","definition_xrefs":["PMID:11257224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle","termid":"GO:0000278"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"second mitotic wave involved in compound eye morphogenesis","synonyms":[{"name":"second mitotic wave during compound eye morphogenesis","type":"related"}],"termid":"GO:0016330"}


id: RO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"},{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_part_of","termid":"RO:0002216"}


id: PBO:0060830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 4","termid":"PBO:0060830"}


id: MONDO:1012264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"androgen insensitivity syndrome, non-human animal","termid":"MONDO:1011919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen insensitivity syndrome, dog","secondary_identifiers":["OMIA:000991-9615"],"synonyms":[{"name":"AIS, dog","type":"exact"}],"termid":"MONDO:1012264","xrefs":{"Monarch":{"xref_id":"1012264"}}}


id: PBO:0065886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB34, member RAS oncogene family","termid":"PBO:0065886"}


id: GO:0044791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a host organism activates or increases the frequency, rate or extent of the release of a virus with which it is infected, from its cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of viral release from host cell (obsolete GO:0044791)","termid":"GO:0044791"}


id: PBO:0117247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptidyl-tRNA hydrolase, stalled-ribosome rescue factor srRF2, Pth3","termid":"PBO:0117247"}


id: GO:0051434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH3 protein domain, present in Bcl-2 family members. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death.","definition_xrefs":["PMID:12133724","PMID:11048732","PMID:9704409","Prosite:PS01259","PMID:9020082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"},{"relation_name":"is_a","term_name":"death domain binding","termid":"GO:0070513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"BH3 domain binding","termid":"GO:0051434"}


id: PBO:0038950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte associated pyruvate carboxylase interacting lncRNA","termid":"PBO:0038950"}


id: PBO:0017066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator family transmembrane transporter Mug111 (predicted)","termid":"PBO:0017066"}


id: MONDO:0018742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"familial gastric type 1 neuroendocrine tumor","secondary_identifiers":["MEDGEN:1826112","UMLS:C5681095","GARD:21932","Orphanet:464756"],"synonyms":[{"name":"familial type 1 gNET","type":"exact"},{"name":"hereditary type 1 gNET","type":"exact"}],"termid":"MONDO:0018742","xrefs":{"Monarch":{"xref_id":"0018742"}}}


id: PBO:0063013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 2","termid":"PBO:0063013"}


id: PBO:0029147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_methylenetetrahydrofolate_reductase_(NADPH)_activity","termid":"PBO:0029147"}


id: MONDO:0016976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thymic neuroendocrine carcinoma","termid":"MONDO:0020516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"well-differentiated thymic neuroendocrine carcinoma","secondary_identifiers":["GARD:20895","MEDGEN:931134","UMLS:C4305465","SCTID:717922007","Orphanet:263331","icd11.foundation:2004515128"],"termid":"MONDO:0016976","xrefs":{"Monarch":{"xref_id":"0016976"}}}


id: MOD:00456
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a quaternary amine reagent heavy (+9amu) form group.","definition_xrefs":["Unimod:63","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+9amu) (N-term & K)","synonyms":[{"name":"GIST-Quat:2H(9)","type":"related"},{"name":"Quaternary amine labeling reagent heavy form (+9amu), N-term & K","type":"related"}],"termid":"MOD:00456"}


id: PBO:0068935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 178, pseudogene","termid":"PBO:0068935"}


id: PBO:0075297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol O-acyltransferase 2","termid":"PBO:0075297"}


id: PBO:0087416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 6 of the ubiquinol cytochrome-c reductase complex; the complex, also known as the cytochrome bc(1) complex or Complex III, is a component of the mitochondrial inner membrane electron transport chain; highly acidic protein; required for maturation of cytochrome c1; may be loosely associated with the complex since it is easily released into the intermembrane space","termid":"PBO:0087416"}


id: GO:0102408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanedioyl-CoA + sn-glycerol 3-phosphate = coenzyme A + sn-2-C16:0-DCA-LPA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity (obsolete GO:0102408)","termid":"GO:0102408"}


id: PBO:0069681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 958, pseudogene","termid":"PBO:0069681"}


id: GO:0060371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the depolarizing direction away from the resting potential in an atrial cardiomyocyte.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell membrane depolarization","synonyms":[{"name":"atrial depolarization","type":"related"},{"name":"electrocardiogram PR interval","type":"related"},{"name":"regulation of atrial cardiac muscle cell depolarization","type":"exact"},{"name":"regulation of atrial cardiomyocyte membrane depolarization","type":"exact"}],"termid":"GO:0060371"}


id: FYPO:0003164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nuclease activity is absent. All nuclease activities may be absent, or a specific nuclease activity may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abolished nuclease activity","synonyms":[{"name":"nuclease activity abolished","type":"exact"}],"termid":"FYPO:0003164"}


id: GO:0042913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of group A colicins (colicins E1, E2, E3, A, K, and N) from one side of a membrane to the other.","definition_xrefs":["PMID:9171417","GOC:jl","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colicin transmembrane transporter activity","termid":"GO:0042912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"group A colicin transmembrane transporter activity","termid":"GO:0042913"}


id: PR:O94488
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule organizer protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.07c","synonyms":[{"name":"Spom972h-mto1","type":"exact"},{"name":"morphology defective protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94488"}


id: PBO:0083618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 beta subunit of the pyruvate dehydrogenase (PDH) complex; PDH is an evolutionarily conserved multi-protein complex found in mitochondria","termid":"PBO:0083618"}


id: PBO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketoreductase (predicted)","termid":"PBO:0001470"}


id: PATO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A degree of pigmentation quality inhering in a bearer by virtue of the bearer's having substances produced by living organisms that have a color resulting from selective color absorption.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degree of pigmentation","termid":"PATO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pigmented","termid":"PATO:0002248"}


id: GO:1990714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of galactose from UDP-galactose to hydroxyproline residues present in the peptide backbone.","definition_xrefs":["PMID:25600942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxyproline O-galactosyltransferase activity","synonyms":[{"name":"HPGT","type":"exact"}],"termid":"GO:1990714"}


id: PBO:0000998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid reductase (predicted)","termid":"PBO:0000998"}


id: PBO:0064963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 15","termid":"PBO:0064963"}


id: FYPO:0007209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased along the length of the chromosome arms during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:31483748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000641"],"is_obsolete":false,"name":"decreased sister chromatid cohesion along chromosome arms during mitotic interphase","synonyms":[{"name":"decreased mitotic sister chromatid cohesion along chromosome arms during interphase","type":"exact"},{"name":"decreased sister chromatid cohesion along chromosome arms during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased sister chromatid cohesion along chromosome arms during mitotic interphase during vegetative growth","type":"exact"},{"name":"reduced sister chromatid cohesion along chromosome arms during mitotic interphase","type":"exact"}],"termid":"FYPO:0007209"}


id: MONDO:0009515
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85195],"is_not":false,"summary":null,"term":"MONDO:0009515"}]},"cv_name":"mondo","definition":"A form of lecithin-cholesterol acyltransferase deficiency (LCAT) characterized clinically by corneal opacities, hemolytic anemia, and renal failure, and biochemically by severely decreased HDL cholesterol and complete deficiency of the LCAT enzyme.","definition_xrefs":["Orphanet:79293"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"is_a","term_name":"hypolipoproteinemia","termid":"MONDO:0001822"},{"relation_name":"is_a","term_name":"LCAT deficiency","termid":"MONDO:0018999"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"Norum disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:9698","NANDO:1200852","NCIT:C84813","GARD:4011","icd11.foundation:1848131619","UMLS:C0023195","DOID:1391","OMIM:245900","SCTID:238091006"],"synonyms":[{"name":"FLD","type":"exact"},{"name":"LCAT deficiency","type":"related"},{"name":"Norum disease","type":"exact"},{"name":"complete LCAT deficiency","type":"exact"},{"name":"familial LCAT deficiency","type":"related"},{"name":"lecithin acyltransferase deficiency","type":"exact"},{"name":"lecithin:cholesterol acyltransferase deficiency","type":"exact"}],"termid":"MONDO:0009515","terms_by_termid":{"MONDO:0009515":null},"xrefs":{"Monarch":{"xref_id":"0009515"}}}


id: MONDO:0006292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm of the pleura or peritoneum, arising from mesothelial cells. It is associated with exposure to asbestos.","definition_xrefs":["NCIT:C4456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mesothelioma","termid":"MONDO:0005065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mesothelioma","secondary_identifiers":["MedDRA:10027406","UMLS:C0345967","ICD9:199.1","EFO:1000355","ICDO:9050/3","MEDGEN:91062","icd11.foundation:369414280","MESH:C562839","OMIM:156240","Orphanet:50251","SCTID:109378008","GARD:7026","HP:0100001","DOID:1790"],"synonyms":[{"name":"MESOM","type":"related"},{"name":"advanced malignant mesothelioma","type":"narrow"},{"name":"asbestos-related malignant mesothelioma","type":"narrow"},{"name":"diffuse malignant mesothelioma","type":"narrow"},{"name":"malignant mesothelial neoplasm","type":"narrow"},{"name":"malignant mesothelial tumor","type":"exact"},{"name":"malignant mesothelial tumour","type":"exact"},{"name":"malignant mesothelioma","type":"exact"},{"name":"malignant mesothelioma (disease)","type":"exact"},{"name":"malignant neoplasm of mesothelium","type":"exact"},{"name":"malignant neoplasm of the mesothelium","type":"exact"},{"name":"malignant tumor of mesothelium","type":"exact"},{"name":"malignant tumor of the mesothelium","type":"exact"},{"name":"malignant tumour of mesothelium","type":"exact"},{"name":"malignant tumour of the mesothelium","type":"exact"},{"name":"mesothelioma, malignant","type":"exact"},{"name":"mesothelioma, somatic","type":"exact"}],"termid":"MONDO:0006292","xrefs":{"Monarch":{"xref_id":"0006292"}}}


id: PBO:0091969
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as SPNCRNA.503","termid":"PBO:0091969"}


id: GO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RHG (reaper/hid/grimm) domain/motif (AKA iap binding motif).","definition_xrefs":["GOC:dos","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RHG protein domain binding","synonyms":[{"name":"RHG domain binding","type":"exact"},{"name":"iap binding domain binding","type":"exact"},{"name":"inhibitor of apoptosis binding domain binding","type":"exact"},{"name":"reaper hid grim domain binding","type":"exact"}],"termid":"GO:0089719"}


id: PBO:0089430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human thyroid receptor interacting protein homolog, transcription coactivator","termid":"PBO:0089430"}


id: PBO:0113523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar alpha mannosidase; involved in free oligosaccharide (fOS) degradation; upregulated under glucose starvation; targeted to vacuole via CVT pathway and AP-3 pathway","termid":"PBO:0113523"}


id: GO:1902731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GOC:TermGenie","PMID:23212449","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"negatively_regulates","term_name":"chondrocyte proliferation","termid":"GO:0035988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chondrocyte proliferation","synonyms":[{"name":"down regulation of cartilage cell proliferation","type":"exact"},{"name":"down regulation of chondrocyte cell proliferation","type":"exact"},{"name":"down regulation of chondrocyte proliferation","type":"exact"},{"name":"down-regulation of cartilage cell proliferation","type":"exact"},{"name":"down-regulation of chondrocyte cell proliferation","type":"exact"},{"name":"down-regulation of chondrocyte proliferation","type":"exact"},{"name":"downregulation of cartilage cell proliferation","type":"exact"},{"name":"downregulation of chondrocyte cell proliferation","type":"exact"},{"name":"downregulation of chondrocyte proliferation","type":"exact"},{"name":"inhibition of cartilage cell proliferation","type":"narrow"},{"name":"inhibition of chondrocyte cell proliferation","type":"narrow"},{"name":"inhibition of chondrocyte proliferation","type":"narrow"},{"name":"negative regulation of cartilage cell proliferation","type":"exact"},{"name":"negative regulation of chondrocyte cell proliferation","type":"exact"}],"termid":"GO:1902731"}


id: GO:0061911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amphisomes fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. Fusion provides an acidic environment and digestive function to the interior of the amphisome.","definition_xrefs":["PMID:24219988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006914","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"amphisome-lysosome fusion","termid":"GO:0061911"}


id: GO:0071036
data:
  {"annotated_genes":["SJAG_03984","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70020,70470],"is_not":false,"summary":null,"term":"GO:0071036"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a small nucleolar RNA (snoRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target snoRNA.","definition_xrefs":["GOC:krc","GOC:dgf","PMID:15935758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA catabolic process","termid":"GO:0016077"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent snoRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"nuclear poly(A)-dependent snoRNA catabolic process","type":"related"}],"termid":"GO:0071036","terms_by_termid":{"GO:0071036":null}}


