# terms

id: PBO:0054604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2009","termid":"PBO:0054604"}


id: GO:1905116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lateral attachment of mitotic spindle microtubules to kinetochore.","definition_xrefs":["GO_REF:0000058","PMID:22375062","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1902425"},{"relation_name":"is_a","term_name":"regulation of lateral attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1905115"},{"relation_name":"positively_regulates","term_name":"lateral attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0099607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"positive regulation of lateral attachment of mitotic spindle microtubules to kinetochore","synonyms":[{"name":"activation of lateral attachment of mitotic spindle microtubules to kinetochore","type":"narrow"},{"name":"up regulation of lateral attachment of mitotic spindle microtubules to kinetochore","type":"exact"},{"name":"up-regulation of lateral attachment of mitotic spindle microtubules to kinetochore","type":"exact"},{"name":"upregulation of lateral attachment of mitotic spindle microtubules to kinetochore","type":"exact"}],"termid":"GO:1905116"}


id: PBO:0004646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase (predicted)","termid":"PBO:0004646"}


id: MONDO:0018966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated growth hormone deficiency (obsolete MONDO:0018966)","termid":"MONDO:0018966","xrefs":{"Monarch":{"xref_id":"0018966"}}}


id: GO:2000334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood microparticle formation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of blood microparticle formation","termid":"GO:2000332"},{"relation_name":"positively_regulates","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood microparticle formation","synonyms":[{"name":"positive regulation of microparticle generation","type":"exact"},{"name":"positive regulation of microparticle release","type":"exact"}],"termid":"GO:2000334"}


id: GO:1905540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-7 (IL-7) and that consists of, at a minimum, an interleukin, an alpha and a gamma chain as well as optional additional kinase subunits. The alpha chain binds IL-7 with high affinity and subsequently binds the cytokine receptor common gamma chain that forms part of multiple interleukin receptors.","definition_xrefs":["GOC:TermGenie","PMID:19141282","GO_REF:0000088","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-7 receptor complex","synonyms":[{"name":"IL-7 receptor complex","type":"exact"},{"name":"IL-7-receptor complex","type":"exact"},{"name":"IL7 receptor complex","type":"exact"},{"name":"IL7-receptor complex","type":"exact"}],"termid":"GO:1905540"}


id: GO:0048571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a day length that exceeds a particular duration known as the 'critical day length'. The critical day length varies between species. Although the term long-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness falls short of the number of hours defined by 24 hours minus the critical day length.","definition_xrefs":["GOC:pj","GOC:jid","ISBN:0582015952","ISBN:0697037754","ISBN:0709408862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long-day photoperiodism","synonyms":[{"name":"response to long-day","type":"exact"},{"name":"response to long-day photoperiod","type":"related"},{"name":"response to short-night","type":"exact"},{"name":"short-night photoperiodism","type":"exact"}],"termid":"GO:0048571"}


id: GO:0048257
data:
  {"annotated_genes":["SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74130],"is_not":false,"summary":null,"term":"GO:0048257"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a 3' flap structure in DNA, but not other DNA structures; processes the 3' ends of Okazaki fragments in lagging strand DNA synthesis.","definition_xrefs":["GOC:jid","PMID:10635319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"},{"relation_name":"is_a","term_name":"flap endonuclease activity","termid":"GO:0048256"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"3'-flap endonuclease activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"3' flap endonuclease activity","type":"exact"}],"termid":"GO:0048257","terms_by_termid":{"GO:0048257":null}}


id: MONDO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vestibular nystagmus (obsolete MONDO:0001872)","secondary_identifiers":["SCTID:46888001","ICD9:379.54","DOID:14070"],"synonyms":[{"name":"Nystagmus associated with disorder of the vestibular system","type":"exact"},{"name":"obsolete vestibular nystagmus (disease)","type":"exact"},{"name":"vestibular nystagmus","type":"exact"}],"termid":"MONDO:0001872","xrefs":{"Monarch":{"xref_id":"0001872"}}}


id: PBO:0111533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, implicated in rRNA processing","termid":"PBO:0111533"}


id: PBO:0000840
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5","termid":"PBO:0000840"}


id: GO:0045112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of integrins, a large family of transmembrane proteins that act as receptors for cell-adhesion molecules.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"integrin biosynthetic process","synonyms":[{"name":"integrin anabolism","type":"exact"},{"name":"integrin biosynthesis","type":"exact"},{"name":"integrin formation","type":"exact"},{"name":"integrin synthesis","type":"exact"}],"termid":"GO:0045112"}


id: PBO:0042573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein N-terminal like pseudogene 2","termid":"PBO:0042573"}


id: PBO:0066344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 6","termid":"PBO:0066344"}


id: PBO:0084791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; mutation affects vacuolar protein sorting; putative transporter; member of the sugar porter family; VPS73 has a paralog, YBR241C, that arose from the whole genome duplication","termid":"PBO:0084791"}


id: PATO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's absence or closure of a normal body orifice or tubular passage.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closed","termid":"PATO:0000608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atretic","synonyms":[{"name":"atresia","type":"exact"}],"termid":"PATO:0001819"}


id: MONDO:0014329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrial standstill in which the cause of the disease is a mutation in the NPPA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial standstill","termid":"MONDO:0015281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial standstill 2","secondary_identifiers":["MEDGEN:816731","UMLS:C3810401","DOID:0080663","GARD:18612","OMIM:615745"],"synonyms":[{"name":"ATRST2","type":"related"},{"name":"NPPA atrial standstill","type":"exact"},{"name":"atrial dilation and standstill","type":"related"},{"name":"atrial standstill 2","type":"exact"},{"name":"atrial standstill caused by mutation in NPPA","type":"exact"},{"name":"atrial standstill type 2","type":"exact"},{"name":"cardiomyopathy, atrial dilated, with atrial standstill","type":"related"}],"termid":"MONDO:0014329","xrefs":{"Monarch":{"xref_id":"0014329"}}}


id: PBO:0003277
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.5","termid":"PBO:0003277"}


id: PBO:0089416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S45","termid":"PBO:0089416"}


id: PBO:0030213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_oxidative_stress","termid":"PBO:0030213"}


id: PBO:0078005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 5","termid":"PBO:0078005"}


id: GO:0086020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from an SA node cell to an atrial cardiomyocyte. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"gap junction channel activity involved in SA node cell-atrial cardiac muscle cell electrical coupling","synonyms":[{"name":"gap junction channel activity involved in SA node cell-atrial cardiomyocyte electrical coupling","type":"exact"},{"name":"gap junction channel activity involved in SAN cell-atrial cardiomyocyte electrical coupling","type":"exact"},{"name":"gap junction channel activity involved in sinoatrial node cell-atrial cardiomyocyte electrical coupling","type":"exact"},{"name":"gap junction channel activity involved in sinus node cell-atrial cardiomyocyte electrical coupling","type":"narrow"}],"termid":"GO:0086020"}


id: SO:0001443
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophilic amino acid encoded by the codons GGN (GGT, GGC, GGA and GGG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine","synonyms":[{"name":"G","type":"exact"},{"name":"Gly","type":"exact"}],"termid":"SO:0001443"}


id: PBO:0113353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pheromone-induced projection (shmoo) formation; regulates septin architecture during mating; has an RVXF motif that mediates targeting of Glc7p to mating projections; also detected in peroxisomes; interacts with Cdc12p; AFR1 has a paralog, YER158C, that arose from the whole genome duplication","termid":"PBO:0113353"}


id: PBO:0065098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent type I regulatory subunit alpha pseudogene 1","termid":"PBO:0065098"}


id: GO:0038008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intracellular process in which a signal is passed on to downstream components within the cell via a tumor necrosis factor receptor-associated factor (TRAF). TRAFs are directly or indirectly recruited to the intracellular domains of cell surface receptors, and engage other signaling proteins to transfer the signal from a cell surface receptor to other intracellular signaling components.","definition_xrefs":["GOC:bf","PMID:20596822","PMID:19918944"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAF-mediated signal transduction (obsolete GO:0038008)","synonyms":[{"name":"TRAF signaling","type":"exact"},{"name":"TRAF-mediated intracellular signaling","type":"exact"},{"name":"TRAF-mediated signaling","type":"exact"},{"name":"TRAF-mediated signalling","type":"exact"},{"name":"tumor necrosis factor receptor-associated factor signal transduction","type":"exact"},{"name":"tumor necrosis factor receptor-associated factor signaling","type":"exact"}],"termid":"GO:0038008"}


id: MONDO:0013319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 4","termid":"MONDO:0016955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4Q32.1-q32.2 triplication syndrome","secondary_identifiers":["OMIM:613603","UMLS:C3150857","MEDGEN:462207"],"synonyms":[{"name":"chromosome 4Q32.1-q32.2 triplication syndrome","type":"exact"}],"termid":"MONDO:0013319","xrefs":{"Monarch":{"xref_id":"0013319"}}}


id: PBO:0000819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyacetone kinase Dak1","termid":"PBO:0000819"}


id: GO:0046012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oskar mRNA translation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"is_a","term_name":"regulation of oskar mRNA translation","termid":"GO:0046011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oskar mRNA translation","synonyms":[{"name":"activation of oskar mRNA translation","type":"narrow"},{"name":"stimulation of oskar mRNA translation","type":"narrow"},{"name":"up regulation of oskar mRNA translation","type":"exact"},{"name":"up-regulation of oskar mRNA translation","type":"exact"},{"name":"upregulation of oskar mRNA translation","type":"exact"}],"termid":"GO:0046012"}


id: PBO:0063729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 2 pseudogene 1","termid":"PBO:0063729"}


id: PBO:0050607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 1 pseudogene 1","termid":"PBO:0050607"}


id: PBO:0069124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 374, pseudogene","termid":"PBO:0069124"}


id: PBO:0052040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JunD proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0052040"}


id: MONDO:0007978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant mesothelioma (obsolete MONDO:0007978)","termid":"MONDO:0007978","xrefs":{"Monarch":{"xref_id":"0007978"}}}


id: PATO:0001962
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled inwards spirally on each side.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involute","termid":"PATO:0001962"}


id: MONDO:0022965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I large cystic tumor that occurs almost exclusively in infants, with a prominent desmoplastic stroma having a neuroepithelial population of neoplastic astrocytes together with a variable neuronal component. It involves the superficial cerebral cortex and leptomeninges, and often attaches to the dura. Although clinically it presents as a large tumor, it generally has a good prognosis following surgical resection. (Adapted from WHO)","definition_xrefs":["NCIT:C4738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoplastic infantile ganglioglioma","secondary_identifiers":["GARD:8648","ONCOTREE:DIG","DOID:0081259","UMLS:C1321878","MEDGEN:231168"],"synonyms":[{"name":"DIG","type":"exact"},{"name":"Desmoplastic infantile ganglioglioma","type":"exact"}],"termid":"MONDO:0022965","xrefs":{"Monarch":{"xref_id":"0022965"}}}


id: GO:1905223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which an epicardium is generated and organized.","definition_xrefs":["PMID:18718461","GO_REF:0000083","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium morphogenesis","synonyms":[{"name":"heart epicardium morphogenesis","type":"exact"},{"name":"pericardium visceral mesothelium morphogenesis","type":"related"},{"name":"visceral serous pericardium of heart morphogenesis","type":"exact"},{"name":"visceral serous pericardium proper morphogenesis","type":"exact"}],"termid":"GO:1905223"}


id: MONDO:0700014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 7 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 disorder","termid":"MONDO:0700014","xrefs":{"Monarch":{"xref_id":"0700014"}}}


id: PBO:0061211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 4","termid":"PBO:0061211"}


id: GO:0060639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces the formation of the salivary gland field by means of the secretion of a signal by a mesenchymal cell and its reception and interpretation by an epithelial cell resulting in it adopting the identity of a salivary gland bud cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"positively_regulates","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of salivary gland formation by mesenchymal-epithelial signaling","synonyms":[{"name":"positive regulation of salivary gland formation by mesenchymal-epithelial signalling","type":"exact"}],"termid":"GO:0060639"}


id: GO:1900216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in metanephric collecting duct development.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","GOC:TermGenie","PMID:17314325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in metanephric collecting duct development","termid":"GO:1900214"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in metanephric collecting duct development","termid":"GO:1900204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"activation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"activation of apoptotic process involved in metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"activation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"activation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"activation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"activation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"activation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"positive regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"positive regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"positive regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"up regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"up regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"up regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"up regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"up regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"up-regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"up-regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"up-regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic process involved in metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"upregulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"upregulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"upregulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"upregulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"upregulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900216"}


id: GO:1902753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal amino acid absorption.","definition_xrefs":["GO_REF:0000058","PMID:1526373","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal amino acid absorption","termid":"GO:1902752"},{"relation_name":"negatively_regulates","term_name":"renal amino acid absorption","termid":"GO:1990297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal amino acid absorption","synonyms":[{"name":"down regulation of renal amino acid absorption","type":"exact"},{"name":"down-regulation of renal amino acid absorption","type":"exact"},{"name":"downregulation of renal amino acid absorption","type":"exact"},{"name":"inhibition of renal amino acid absorption","type":"narrow"}],"termid":"GO:1902753"}


id: MOD:01407
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form L-phenylalanine thiazoline-4-carboxylic acid.","definition_xrefs":["RESID:AA0484","PubMed:8557573","PubMed:7592021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-phenylalanine thiazoline-4-carboxylic acid","synonyms":[{"name":"(4R)-2-[(1S)-1-amino-2-phenylethyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-phenylethyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazoline-4-carboxylic acid (Phe-Cys)","type":"exact"},{"name":"L-phenylalanine thiazoline-4-carboxylic acid","type":"exact"}],"termid":"MOD:01407"}


id: PBO:0039876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 32","termid":"PBO:0039876"}


id: FYPO:0006040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubules attached to the kinetochore lengthen instead of shortening during mitotic metaphase chromosome recapture.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000641","FYPO:0000631","FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal kinetochore microtubule polymerization during mitotic metaphase chromosome recapture","synonyms":[{"name":"abnormal kinetochore microtubule polymerization during chromosome recapture during mitosis","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during chromosome recapture during mitotic metaphase","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during mitotic metaphase kinetochore retrieval","type":"exact"},{"name":"abnormal kinetochore microtubule polymerization during sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0006040"}


id: GO:0051693
data:
  {"annotated_genes":["SJAG_01993","SJAG_00279","SJAG_01894","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75443,78930,79827,92089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"The binding of a protein or protein complex to the end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.","definition_xrefs":["ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of actin filament depolymerization","termid":"GO:0030835"},{"relation_name":"is_a","term_name":"negative regulation of actin filament polymerization","termid":"GO:0030837"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"actin filament capping","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"F-actin capping activity","type":"related"},{"name":"actin capping activity","type":"related"}],"termid":"GO:0051693","terms_by_termid":{"GO:0051016":null}}


id: GO:0004737
data:
  {"annotated_genes":["SJAG_02734","SJAG_04842","SJAG_03743"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70937,71177,73647],"is_not":false,"summary":null,"term":"GO:0004737"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxo acid = an aldehyde + CO2.","definition_xrefs":["EC:4.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"pyruvate decarboxylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PYRUVATE-DECARBOXYLASE-RXN","RHEA:11628"],"synonyms":[{"name":"2-oxo-acid carboxy-lyase (aldehyde-forming)","type":"related"},{"name":"2-oxo-acid carboxy-lyase activity","type":"related"},{"name":"alpha-carboxylase activity","type":"related"},{"name":"alpha-ketoacid carboxylase activity","type":"related"},{"name":"pyruvic decarboxylase activity","type":"related"}],"termid":"GO:0004737","terms_by_termid":{"GO:0004737":null}}


id: PBO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 4B","termid":"PBO:0039576"}


id: PBO:0052555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor F2","termid":"PBO:0052555"}


id: FYPO:0000275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell cycle phenotype in which cells are viable only if a spindle checkpoint functions normally.","definition_xrefs":["PMID:15483052","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete spindle checkpoint required (obsolete FYPO:0000275)","termid":"FYPO:0000275"}


id: MONDO:0032733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"global developmental delay, progressive ataxia, and elevated glutamine","secondary_identifiers":["UMLS:C5193080","MEDGEN:1680160","OMIM:618412"],"synonyms":[{"name":"GDPAG","type":"related"},{"name":"GLOBAL DEVELOPMENTAL DELAY, PROGRESSIVE ATAXIA, AND ELEVATED GLUTAMINE","type":"related"},{"name":"Glutaminase Deficiency With Impaired Intellectual Development and Progressive Ataxia","type":"related"}],"termid":"MONDO:0032733","xrefs":{"Monarch":{"xref_id":"0032733"}}}


id: PR:Q10350
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cab4 gene.","definition_xrefs":["UniProtKB:Q10350","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.08","synonyms":[{"name":"Spom972h-cab4","type":"exact"}],"termid":"PR:Q10350"}


id: PBO:0053991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1310","termid":"PBO:0053991"}


id: MONDO:0004169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A combination of distressing physical, psychologic, or behavioral changes that occur during the luteal phase of the menstrual cycle. Symptoms of pms are diverse (such as pain, water-retention, anxiety, cravings, and depression) and they diminish markedly 2 or 3 days after the initiation of menses.","definition_xrefs":["MESH:D011293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premenstrual tension","secondary_identifiers":["SCTID:82639001","ICD9:625.4","MEDGEN:87683","DOID:727","UMLS:C0376356"],"termid":"MONDO:0004169","xrefs":{"Monarch":{"xref_id":"0004169"}}}


id: PBO:0064038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 72","termid":"PBO:0064038"}


id: MONDO:0004885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic choroid disorder","termid":"MONDO:0001898"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"choroidal sclerosis","secondary_identifiers":["ICD9:363.40","MEDGEN:137998","MESH:C535358","SCTID:406446000","UMLS:C0344297","DOID:980","ICD9:363.4"],"synonyms":[{"name":"choroidal degenerations","type":"exact"},{"name":"neurodegenerative disease of optic choroid","type":"exact"},{"name":"optic choroid neurodegenerative disease","type":"exact"}],"termid":"MONDO:0004885","xrefs":{"Monarch":{"xref_id":"0004885"}}}


id: FYPO:0006380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the vacuole is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"normal protein localization to vacuole during nitrogen starvation","synonyms":[{"name":"normal protein localisation to vacuole during nitrogen starvation","type":"exact"},{"name":"normal protein localization to vacuole during nitrogen depletion","type":"exact"},{"name":"normal protein localization to vacuole during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006380"}


id: GO:0098503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing a 3' phosphate group from a DNA molecule.","definition_xrefs":["GOC:DOS"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA 3' dephosphorylation (obsolete GO:0098503)","termid":"GO:0098503"}


id: PBO:0080736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWP1 antisense RNA 1","termid":"PBO:0080736"}


id: GO:0021676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 8. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 8 morphogenesis","termid":"GO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 8 structural organization","synonyms":[{"name":"rhombomere 8 structural organisation","type":"exact"}],"termid":"GO:0021676"}


id: GO:0052333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of cell wall of other organism involved in symbiotic interaction (obsolete GO:0052333)","synonyms":[{"name":"metabolism by organism of cell wall of other organism","type":"related"},{"name":"modification by organism of cell wall of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052333"}


id: PBO:0069298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 554, pseudogene","termid":"PBO:0069298"}


id: MONDO:0019031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thrombocytopenia with congenital dyserythropoietic anemia (CDA) is a rare hematological disorder, seen almost exclusively in males, characterized by moderate to severe thrombocytopenia with hemorrhages with or without the presence of mild to severe anemia.","definition_xrefs":["Orphanet:67044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, X-linked, with or without dyserythropoietic anemia","termid":"MONDO:0010308"},{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia","termid":"MONDO:0019403"},{"relation_name":"is_a","term_name":"GATA1-Related X-Linked Cytopenia","termid":"MONDO:0100089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"thrombocytopenia with congenital dyserythropoietic anemia","secondary_identifiers":["UMLS:C4302508","SCTID:722475006","GARD:16676","MEDGEN:928177"],"synonyms":[{"name":"X-linked congenital dyserythropoietic anaemia with thrombocytopenia","type":"exact"},{"name":"X-linked congenital dyserythropoietic anemia with thrombocytopenia","type":"exact"},{"name":"XDAT","type":"exact"},{"name":"congenital dyserythropoietic anaemia with thombocytopenia","type":"exact"},{"name":"congenital dyserythropoietic anemia with thombocytopenia","type":"exact"}],"termid":"MONDO:0019031","xrefs":{"Monarch":{"xref_id":"0019031"}}}


id: PBO:0038771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 10","termid":"PBO:0038771"}


id: FYPO:0005714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus begins earlier than normal.","definition_xrefs":["PMID:17538026","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleolus","termid":"FYPO:0003687"},{"relation_name":"is_a","term_name":"premature protein localization to nucleus during vegetative growth","termid":"FYPO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"premature protein localization to nucleolus","synonyms":[{"name":"advanced protein localization to nucleolus","type":"exact"},{"name":"precocious protein localization to nucleolus","type":"related"},{"name":"premature protein localisation to nucleolus","type":"exact"},{"name":"premature protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"premature protein localization to nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0005714"}


id: PBO:0034605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G2_DNA_damage_checkpoint_during_cellular_response_to_UV_during_mitotic_S_phase","termid":"PBO:0034605"}


id: PBO:0039900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF3 antisense RNA 1","termid":"PBO:0039900"}


id: GO:0010353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose stimulus.","definition_xrefs":["PMID:17031512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trehalose","synonyms":[{"name":"response to trehalose stimulus","type":"exact"}],"termid":"GO:0010353"}


id: PBO:0062913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P2RX5-TAX1BP3 readthrough (NMD candidate)","termid":"PBO:0062913"}


id: GO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates transport.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transport by transcription from RNA polymerase II promoter (obsolete GO:0100020)","termid":"GO:0100020"}


id: PBO:0063949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIN2 (TERF1) interacting telomerase inhibitor 1","termid":"PBO:0063949"}


id: PBO:0089531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster assembly protein Iba57","termid":"PBO:0089531"}


id: MONDO:0009247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fronto-facio-nasal dysostosis is characterized by multiple craniofacial anomalies (brachycephaly, blepharophimosis, ptosis, S-shaped palpebral fissures, coloboma, cleft lip and palate, deformed nostrils, encephalocele, hypertelorism, midface hypoplasia, malformed eyes, and absent inner eyelashes).","definition_xrefs":["Orphanet:1791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"frontofacionasal dysplasia","secondary_identifiers":["GARD:2390","MESH:C538063","OMIM:229400","MEDGEN:444125","NORD:1164","SCTID:716022002","UMLS:C2931720"],"synonyms":[{"name":"Ffnd","type":"related"},{"name":"Frontofacionasal dysostosis","type":"related"},{"name":"Gollop syndrome","type":"exact"},{"name":"fronto-facio-nasal dyplasia","type":"related"},{"name":"fronto-facio-nasal dysostosis","type":"related"},{"name":"frontofacionasal dysplasia","type":"exact"}],"termid":"MONDO:0009247","xrefs":{"Monarch":{"xref_id":"0009247"}}}


id: PBO:0055057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2473","termid":"PBO:0055057"}


id: GO:0038154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of interleukin-11 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-11-mediated signaling pathway","synonyms":[{"name":"IL-11-mediated signaling pathway","type":"exact"},{"name":"interleukin-11-mediated signalling pathway","type":"exact"}],"termid":"GO:0038154"}


id: PBO:0088044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme involved in ERAD; located at the cytosolic side of the ER membrane; tail region contains a transmembrane segment at the C-terminus; substrate of the ubiquitin-proteasome pathway; ER-associated protein degradation is also known as ERAD","termid":"PBO:0088044"}


id: PBO:0076553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tax1 binding protein 1","termid":"PBO:0076553"}


id: MONDO:0013906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the ODAPH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta hypomaturation type 2A4","secondary_identifiers":["OMIM:614832","DOID:0110062","UMLS:C3553830","GARD:15847","MEDGEN:766744"],"synonyms":[{"name":"AI2A4","type":"exact"},{"name":"ODAPH amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in ODAPH","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type IIA4","type":"exact"},{"name":"amelogenesis imperfecta type IIA4","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA4","type":"related"},{"name":"amelogenesis imperfecta, type IIA4","type":"exact"}],"termid":"MONDO:0013906","xrefs":{"Monarch":{"xref_id":"0013906"}}}


id: PBO:0064859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R15B and PIK3C2B antisense RNA 1","termid":"PBO:0064859"}


id: MONDO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An occupational lung disorder caused by inhalation of bagasse dust. In the acute phase, it manifests as cough, dyspnea, fever, chills, and weakness. Chronic exposure may lead to interstitial lung fibrosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"bagassosis","secondary_identifiers":["ICD10CM:J67.1","icd11.foundation:1123061945","ICD9:495.1","MESH:D011009","UMLS:C0004681","MEDGEN:2539","DOID:12522","SCTID:67242002","NCIT:C34409"],"synonyms":[{"name":"bagasse extrinsic allergic alveolitis","type":"exact"},{"name":"bagasse workers lung","type":"exact"},{"name":"extrinsic allergic alveolitis from bagasse","type":"exact"},{"name":"sugar cane worker pneumonitis","type":"exact"}],"termid":"MONDO:0001540","xrefs":{"Monarch":{"xref_id":"0001540"}}}


id: PBO:0084245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner plaque spindle pole body (SPB) component; gamma-tubulin small complex (gamma-TuSC) receptor that interacts with Spc98p to recruit the complex to the nuclear side of the SPB, connecting nuclear microtubules to the SPB; promotes gamma-TuSC assembly and oligomerization to initiate microtubule nucleation; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner; ortholog of human pericentrin (kendrin)","termid":"PBO:0084245"}


id: GO:0010896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of triglyceride.","definition_xrefs":["GOC:rn","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of triglyceride metabolic process","termid":"GO:0090207"},{"relation_name":"regulates","term_name":"triglyceride catabolic process","termid":"GO:0019433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of triglyceride catabolic process","synonyms":[{"name":"regulation of triacylglycerol catabolic process","type":"exact"}],"termid":"GO:0010896"}


id: PBO:0065583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine kinase 7 (inactive)","termid":"PBO:0065583"}


id: MONDO:0036976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm arising from the epithelial cells. It is characterized by the absence of morphologic features associated with malignancy (severe cytologic atypia, tumor cell necrosis, and high mitotic rate). Benign epithelial neoplasms remain confined to the original site of growth and only rarely metastasize to other anatomic sites.","definition_xrefs":["NCIT:C4092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign epithelial neoplasm","secondary_identifiers":["MEDGEN:90747","ICDO:8011/0","UMLS:C0334232","ICDO:8010/0"],"synonyms":[{"name":"benign epithelial neoplasm","type":"exact"},{"name":"benign epithelial tumor","type":"exact"},{"name":"benign epithelial tumour","type":"exact"},{"name":"benign epithelioma","type":"exact"},{"name":"benign neoplasm of epithelium","type":"exact"},{"name":"benign neoplasm of the epithelium","type":"exact"},{"name":"benign tumor of epithelium","type":"exact"},{"name":"benign tumor of the epithelium","type":"exact"},{"name":"benign tumour of epithelium","type":"exact"},{"name":"benign tumour of the epithelium","type":"exact"},{"name":"epithelial neoplasm, benign","type":"exact"},{"name":"epithelioma, benign","type":"exact"}],"termid":"MONDO:0036976","xrefs":{"Monarch":{"xref_id":"0036976"}}}


id: GO:0044796
data:
  {"annotated_genes":["SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043626"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of increasing the processivity of nucleotide polymerization by DNA polymerase as a part of DNA replication.","definition_xrefs":["GOC:bhm","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA polymerase processivity factor complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0044796","terms_by_termid":{"GO:0043626":null}}


id: PBO:0079056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 11-2","termid":"PBO:0079056"}


id: GO:2000491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatic stellate cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell activation","termid":"GO:2000489"},{"relation_name":"positively_regulates","term_name":"hepatic stellate cell activation","termid":"GO:0035733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatic stellate cell activation","termid":"GO:2000491"}


id: GO:0004311
data:
  {"annotated_genes":["SJAG_00580","SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99360,109235],"is_not":false,"summary":null,"term":"GO:0004311"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + isopentenyl diphosphate = (2E,6E,10E)-geranylgeranyl diphosphate + diphosphate.","definition_xrefs":["RHEA:17653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"geranylgeranyl diphosphate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:FARNESYLTRANSTRANSFERASE-RXN","KEGG_REACTION:R02061","EC:2.5.1.29"],"synonyms":[{"name":"farnesyltranstransferase activity","type":"exact"},{"name":"geranylgeranyl pyrophosphate synthase activity","type":"exact"},{"name":"geranylgeranyl pyrophosphate synthetase activity","type":"exact"},{"name":"geranylgeranyl-PP synthetase activity","type":"exact"},{"name":"geranylgeranyl-diphosphate synthase activity","type":"exact"},{"name":"trans,trans-farnesyl-diphosphate:isopentenyl-diphosphate farnesyltranstransferase activity","type":"related"}],"termid":"GO:0004311","terms_by_termid":{"GO:0004311":null}}


id: GO:1902131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-lariciresinol.","definition_xrefs":["GOC:TermGenie","PMID:8910615","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(+)-lariciresinol metabolic process","termid":"GO:1902130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(+)-lariciresinol catabolic process","synonyms":[{"name":"(+)-lariciresinol breakdown","type":"exact"},{"name":"(+)-lariciresinol catabolism","type":"exact"},{"name":"(+)-lariciresinol degradation","type":"exact"}],"termid":"GO:1902131"}


id: PBO:0082802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of the arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1 70K protein; protein abundance increases in response to DNA replication stress","termid":"PBO:0082802"}


id: GO:0050866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell activation","synonyms":[{"name":"down regulation of cell activation","type":"exact"},{"name":"down-regulation of cell activation","type":"exact"},{"name":"downregulation of cell activation","type":"exact"},{"name":"inhibition of cell activation","type":"narrow"}],"termid":"GO:0050866"}


id: PBO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective entrance Into Mitosis","termid":"PBO:0018148"}


id: PBO:0085031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-ATPase regulatory subunit of the 26S proteasome; similar to putative proteasomal subunits in other species; null mutant is temperature sensitive and exhibits cell cycle and proteasome assembly defects; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085031"}


id: GO:0120023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to somatostatin, a polypeptide hormone involved in regulating pancreatic alpha and pancreatic beta cells and controlling growth hormone secretion as well as many other functions. Somatostatin is produced by several cell types including pancreatic delta cells. There are several different mature forms of somatostatin.","definition_xrefs":["GOC:cvs","PMID:20472043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"somatostatin binding","termid":"GO:0120023"}


id: PBO:0041654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 4","termid":"PBO:0041654"}


id: PBO:0052323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1328 pseudogene 1","termid":"PBO:0052323"}


id: PBO:0046079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 4","termid":"PBO:0046079"}


id: PBO:0040855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridge-like lipid transfer protein family member 1","termid":"PBO:0040855"}


id: MONDO:0002550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a hypoglossal nerve.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoglossal nerve disorder","termid":"MONDO:0001810"},{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoglossal nerve neoplasm","secondary_identifiers":["NCIT:C5830","UMLS:C1263903","ICD9:239.7","SCTID:126978008","MEDGEN:220392","DOID:3198"],"synonyms":[{"name":"XIIth cranial nerve neoplasms","type":"exact"},{"name":"XIIth cranial nerve tumors","type":"exact"},{"name":"XIIth cranial nerve tumours","type":"exact"},{"name":"hypoglossal nerve neoplasm","type":"exact"},{"name":"hypoglossal nerve neoplasm (disease)","type":"exact"},{"name":"hypoglossal nerve neoplasms","type":"exact"},{"name":"hypoglossal nerve tumor","type":"exact"},{"name":"hypoglossal nerve tumors","type":"exact"},{"name":"hypoglossal nerve tumour","type":"exact"},{"name":"hypoglossal nerve tumours","type":"exact"},{"name":"neoplasm of hypoglossal nerve","type":"exact"},{"name":"neoplasm of the hypoglossal nerve","type":"exact"},{"name":"neoplasm of the twelfth cranial nerve","type":"exact"},{"name":"neoplasm of twelfth cranial nerve","type":"exact"},{"name":"tumor of hypoglossal nerve","type":"exact"},{"name":"tumor of the hypoglossal nerve","type":"exact"},{"name":"tumor of the twelfth cranial nerve","type":"exact"},{"name":"tumor of twelfth cranial nerve","type":"exact"},{"name":"tumour of hypoglossal nerve","type":"exact"},{"name":"tumour of the hypoglossal nerve","type":"exact"},{"name":"tumour of the twelfth cranial nerve","type":"exact"},{"name":"tumour of twelfth cranial nerve","type":"exact"},{"name":"twelfth cranial nerve neoplasm","type":"exact"},{"name":"twelfth cranial nerve neoplasms","type":"exact"},{"name":"twelfth cranial nerve tumor","type":"exact"},{"name":"twelfth cranial nerve tumors","type":"exact"},{"name":"twelfth cranial nerve tumour","type":"exact"},{"name":"twelfth cranial nerve tumours","type":"exact"}],"termid":"MONDO:0002550","xrefs":{"Monarch":{"xref_id":"0002550"}}}


id: MONDO:0007293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukocyte adhesion deficiency type I (LAD-I) is a form of LAD characterized by life-threatening, recurrent bacterial infections.","definition_xrefs":["Orphanet:99842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency","termid":"MONDO:0017570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025","MONDO:0005570"],"is_obsolete":false,"name":"leukocyte adhesion deficiency 1","secondary_identifiers":["DOID:0110910","GARD:6893","SCTID:234582006","UMLS:C0398738","MEDGEN:98310","MESH:C535887","OMIM:116920","NCIT:C4689"],"synonyms":[{"name":"ITGB2 leukocyte adhesion deficiency","type":"exact"},{"name":"LAD-I","type":"exact"},{"name":"LAD1","type":"exact"},{"name":"LFA 1 immunodeficiency","type":"related"},{"name":"LFA-I deficiency","type":"exact"},{"name":"LFA1 immunodeficiency","type":"exact"},{"name":"Lad1","type":"related"},{"name":"Lfa1 immunodeficiency","type":"related"},{"name":"lad","type":"related"},{"name":"lad 1","type":"related"},{"name":"lad-I","type":"exact"},{"name":"lad-type I","type":"exact"},{"name":"leukocyte adhesion deficiency","type":"broad"},{"name":"leukocyte adhesion deficiency 1","type":"exact"},{"name":"leukocyte adhesion deficiency caused by mutation in ITGB2","type":"exact"},{"name":"leukocyte adhesion deficiency type 1","type":"exact"},{"name":"leukocyte adhesion deficiency type I","type":"exact"},{"name":"leukocyte adhesion deficiency, type 1","type":"related"},{"name":"leukocyte adhesion deficiency, type I","type":"related"},{"name":"lymphocyte function-associated antigen 1 immunodeficiency","type":"exact"}],"termid":"MONDO:0007293","xrefs":{"Monarch":{"xref_id":"0007293"}}}


id: PBO:0061906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optineurin","termid":"PBO:0061906"}


id: MONDO:0010765
data:
  {"annotated_genes":["SJAG_03077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"}]},"cv_name":"mondo","definition":"46,XY complete gonadal dysgenesis (46,XY CGD) is a disorder of sex development (DSD) associated with anomalies in gonadal development that result in the presence of female external and internal genitalia despite the 46,XY karyotype.","definition_xrefs":["Orphanet:242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic lymphedema (obsolete MONDO:0019520)","termid":"MONDO:0019520"},{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY complete gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2936694","MESH:D006061","OMIMPS:400044","SCTID:95218005","NORD:1750","GARD:5068","DOID:14448","NCIT:C120198","MEDGEN:445380"],"synonyms":[{"name":"46 XY gonadal dysgenesis","type":"exact"},{"name":"46, XY CGD","type":"exact"},{"name":"46, XY complete gonadal dysgenesis","type":"exact"},{"name":"46, XY pure gonadal dysgenesis","type":"exact"},{"name":"46,XY CGD","type":"exact"},{"name":"46,XY SEX reversal","type":"exact"},{"name":"46,XY gonadal dysgenesis","type":"exact"},{"name":"46,XY pure gonadal dysgenesis","type":"exact"},{"name":"Swyer syndrome","type":"exact"},{"name":"gonadal dysgenesis, XY female type","type":"related"},{"name":"pure gonadal dysgenesis 46,XY","type":"exact"},{"name":"sex-reversing locus on X","type":"related"},{"name":"sex-reversing locus on X, formerly","type":"related"},{"name":"testis-determining Factor, X-chromosomal","type":"related"}],"termid":"MONDO:0010765","terms_by_termid":{"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0010765"}}}


id: PBO:0039846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 12","termid":"PBO:0039846"}


id: GO:0003832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanyl-dopamine + H2O = dopamine + beta-alanine.","definition_xrefs":["RHEA:73467","PMID:16299587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"beta-alanyl-dopamine hydrolase activity","synonyms":[{"name":"N-beta-alanyl-dopamine hydrolase activity","type":"exact"},{"name":"NBAD hydrolase activity","type":"exact"}],"termid":"GO:0003832"}


id: GO:1903454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of androst-4-ene-3,17-dione biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:24399684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"regulates","term_name":"androst-4-ene-3,17-dione biosynthetic process","termid":"GO:1903449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of androst-4-ene-3,17-dione biosynthetic process","synonyms":[{"name":"regulation of androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"regulation of androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"regulation of androst-4-ene-3,17-dione formation","type":"exact"},{"name":"regulation of androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"regulation of androstenedione biosynthetic process","type":"exact"}],"termid":"GO:1903454"}


id: PBO:0030434
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_methyltransferase_activity","termid":"PBO:0030434"}


id: GO:0072179
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a nephric duct. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"nephric duct morphogenesis","termid":"GO:0072178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct formation","secondary_identifiers":["Reactome:R-HSA-9830364"],"termid":"GO:0072179"}


id: GO:0033484
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nitric oxide within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nitric oxide homeostasis","synonyms":[{"name":"NO homeostasis","type":"broad"},{"name":"cellular nitric oxide homeostasis","type":"exact"},{"name":"nitric oxide homeostasis","type":"broad"}],"termid":"GO:0033484"}


id: GO:0061665
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id: PBO:0046314
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-beta-N-acetylglucosaminidase","termid":"PBO:0046314"}


id: PBO:0079497
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin interacting protein","termid":"PBO:0079497"}


id: GO:0048876
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id: PBO:0091516
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id: PBO:0064707
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 43","termid":"PBO:0064707"}


id: MONDO:0020782
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic painless inflammation of the gums. It is characterized by erythema and edema of the gums and bleeding while brushing the teeth.","definition_xrefs":["NCIT:C34474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingivitis","termid":"MONDO:0002508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic gingivitis","secondary_identifiers":["ICD9:523.1","ICD9:523.10","UMLS:C0008684","MEDGEN:965","icd11.foundation:1542018172","SCTID:72621003"],"synonyms":[{"name":"Chronic Gingivitis","type":"related"},{"name":"Chronic gingivitis","type":"related"},{"name":"chronic gingivitis","type":"exact"}],"termid":"MONDO:0020782","xrefs":{"Monarch":{"xref_id":"0020782"}}}


id: GO:0005217
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id: GO:1901633
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id: PR:G2TRQ3
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16E9.20 gene.","definition_xrefs":["UniProtKB:G2TRQ3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C16E9.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.20","synonyms":[{"name":"Spom972h-SPBC16E9.20","type":"exact"}],"termid":"PR:G2TRQ3"}


id: SO:0000876
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id: GO:0032362
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id: MONDO:0044970
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id: GO:0044232
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id: MONDO:0019735
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id: GO:1904850
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id: MONDO:0005820
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id: MONDO:0015613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dentin dysplasia (DD) is a rare disorder belonging to the group of hereditary dentin defects and is characterized by abnormal dentin structure and root development resulting in abnormal tooth development. It encompasses two subtypes: DD type I and DD type II.","definition_xrefs":["Orphanet:1653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin dysplasia","secondary_identifiers":["DOID:701","ICD9:520.5","MESH:D003805","GARD:16575","icd11.foundation:1262020657","MEDGEN:8310","SCTID:109492001","UMLS:C0011430"],"synonyms":[{"name":"DD","type":"exact"},{"name":"dentinal dysplasia","type":"exact"}],"termid":"MONDO:0015613","xrefs":{"Monarch":{"xref_id":"0015613"}}}


id: MONDO:0010027
data:
  {"annotated_genes":["SJAG_04295","SJAG_02139","SJAG_04706","SJAG_05175","SJAG_05182"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85148,85149,85150,85151,85152],"is_not":false,"summary":null,"term":"MONDO:0010027"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"is_a","term_name":"free sialic acid storage disease","termid":"MONDO:0019366"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"free sialic acid storage disease, infantile form","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10067532","NANDO:1200147","MEDGEN:203367","NANDO:2201237","GARD:175","Orphanet:309324","OMIM:269920","UMLS:C1096902","SCTID:34566007"],"synonyms":[{"name":"ISSD","type":"exact"},{"name":"N-acetylneuraminic acid storage disease","type":"related"},{"name":"Nana storage disease","type":"related"},{"name":"infantile free sialic acid storage disease","type":"related"},{"name":"infantile sialic acid storage disease","type":"related"},{"name":"infantile sialic acid storage disorder","type":"related"},{"name":"sialic acid storage disorder, infantile","type":"exact"},{"name":"sialuria, infantile form","type":"related"}],"termid":"MONDO:0010027","terms_by_termid":{"MONDO:0010027":null},"xrefs":{"Monarch":{"xref_id":"0010027"}}}


id: PBO:0030105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutamate_level","termid":"PBO:0030105"}


id: MONDO:0005759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of cattle and other herbivores with the giant liver fluke Fascioloides magna. It is characterized by extensive destruction of the liver parenchyma.","definition_xrefs":["MESH:D005213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascioloidiasis","secondary_identifiers":["DOID:1217","SCTID:69550000","UMLS:C0015655","MEDGEN:8791"],"termid":"MONDO:0005759","xrefs":{"Monarch":{"xref_id":"0005759"}}}


id: PBO:0071853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 48","termid":"PBO:0071853"}


id: PBO:0090474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex RNA-binding subunit Ctf1","termid":"PBO:0090474"}


id: PBO:0048842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceronephosphate O-acyltransferase pseudogene","termid":"PBO:0048842"}


id: MONDO:0013052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the KLHL7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 42","secondary_identifiers":["DOID:0110386","MESH:C567854","ICD10CM:H35.5","OMIM:612943","UMLS:C2751986","MEDGEN:442864","GARD:15593"],"synonyms":[{"name":"KLHL7 retinitis pigmentosa","type":"exact"},{"name":"RP42","type":"exact"},{"name":"retinitis pigmentosa 42","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in KLHL7","type":"exact"},{"name":"retinitis pigmentosa type 42","type":"exact"}],"termid":"MONDO:0013052","xrefs":{"Monarch":{"xref_id":"0013052"}}}


id: PBO:0042711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 2","termid":"PBO:0042711"}


id: PR:O42663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27D7.09c gene.","definition_xrefs":["UniProtKB:O42663","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized but2-like protein C27D7.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.09c","synonyms":[{"name":"Spom972h-SPAC27D7.09c","type":"exact"}],"termid":"PR:O42663"}


id: PBO:0084612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YMR268W-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YMR269W","termid":"PBO:0084612"}


id: GO:0048788
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The specialized cytoskeletal matrix of the presynaptic active zone. It has specialized functions in organizing synaptic events such as immobilisation or translocation of synaptic vesicles, and assembling active zone components. It is believed to form a molecular scaffold that organizes neurotransmitter release sites.","definition_xrefs":["PMID:10944438","GOC:jid","GOC:ef","GOC:dl","NIF_Subcellular:sao1470121605","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton","termid":"GO:0030863"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"},{"relation_name":"part_of","term_name":"presynaptic active zone cytoplasmic component","termid":"GO:0098831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"cytoskeleton of presynaptic active zone","synonyms":[{"name":"CAZ","type":"narrow"},{"name":"T-bar","type":"narrow"},{"name":"T-bar ribbon","type":"narrow"},{"name":"active zone cytomatrix","type":"exact"},{"name":"pre-synaptic cytoskeletal matrix assembled at active zones","type":"exact"},{"name":"pre-synaptic dense body","type":"narrow"},{"name":"pre-synaptic ribbon","type":"related"},{"name":"presynaptic cytomatrix assembled at active zones","type":"exact"},{"name":"presynaptic cytoskeletal matrix","type":"exact"},{"name":"presynaptic cytoskeletal matrix assembled at active zones","type":"exact"},{"name":"presynaptic dense body","type":"narrow"},{"name":"presynaptic ribbon","type":"related"},{"name":"ribbon","type":"related"},{"name":"synaptic ribbon","type":"narrow"}],"termid":"GO:0048788"}


id: GO:0009301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template.","definition_xrefs":["ISBN:0321000382","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0016073","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"snRNA transcription","termid":"GO:0009301"}


id: MONDO:0100112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of a single peroxisomal protein, acyl-CoA binding domain containing protein 5, which forms a contact site between the peroxisomes and the ER. The deficiency is characterized by elevated blood very long-chain fatty acids (VLCFAs), retinal dystrophy, cerebral white matter disease and psychomotor delay.","definition_xrefs":["PMID:27799409","PMID:27899449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of plasmalogens biosynthesis","termid":"MONDO:0017986"},{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"},{"relation_name":"is_a","term_name":"disorder of peroxisomal transporter","termid":"MONDO:0100372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"acyl-CoA binding domain containing protein 5 deficiency","synonyms":[{"name":"ACBD5 deficiency","type":"exact"},{"name":"acyl-CoA binding domain containing protein 5 deficiency","type":"exact"}],"termid":"MONDO:0100112","xrefs":{"Monarch":{"xref_id":"0100112"}}}


id: MONDO:0010701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete opticoacoustic nerve atrophy with dementia (obsolete MONDO:0010701)","termid":"MONDO:0010701","xrefs":{"Monarch":{"xref_id":"0010701"}}}


id: PBO:0089229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin complex subunit 4","termid":"PBO:0089229"}


id: SO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene located in kinetoplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"kinetoplast","termid":"SO:0000741"},{"relation_name":"is_a","term_name":"mt_gene","termid":"SO:0000088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetoplast_gene","synonyms":[{"name":"kinetoplast gene","type":"exact"}],"termid":"SO:0000089"}


id: PBO:0051965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intersectin 1","termid":"PBO:0051965"}


id: MONDO:0016039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"superficial Fibromatosis","termid":"MONDO:0016037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile digital fibromatosis","secondary_identifiers":["UMLS:C1318562","HP:0025197","MEDGEN:232929","GARD:8487","SCTID:399903008","NCIT:C3456","ICD9:238.8","Orphanet:199267"],"synonyms":[{"name":"IDF","type":"related"},{"name":"Reye tumor","type":"exact"},{"name":"Reye tumour","type":"exact"},{"name":"Reye's tumor","type":"exact"},{"name":"Reye's tumour","type":"exact"},{"name":"asymptomatic nodular proliferation of fibrous tissue on the dorsal and lateral aspects of the fingers or toes","type":"related"},{"name":"digital fibrous tumor of Reye","type":"exact"},{"name":"digital fibrous tumour of Reye","type":"exact"},{"name":"inclusion body fibromatosis","type":"exact"},{"name":"inclusion body fibromatosis (disease)","type":"exact"},{"name":"infantile digital fibroma/fibromatosis","type":"exact"},{"name":"infantile digital fibromatosis","type":"exact"},{"name":"recurring digital fibrous tumor of childhood","type":"exact"},{"name":"recurring digital fibrous tumour of childhood","type":"exact"}],"termid":"MONDO:0016039","xrefs":{"Monarch":{"xref_id":"0016039"}}}


id: FYPO:0006182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a cytoplasmic microtubule is decreased during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to interphase microtubule","synonyms":[{"name":"decreased protein localisation to cytoplasmic microtubule during mitotic interphase","type":"exact"},{"name":"decreased protein localisation to interphase microtubule","type":"exact"},{"name":"decreased protein localization to cytoplasmic microtubule during interphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to cytoplasmic microtubule during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased protein localization to cytoplasmic microtubule during mitotic interphase","type":"exact"},{"name":"decreased protein localization to interphase cytoplasmic microtubule","type":"exact"},{"name":"decreased protein localization to interphase microtubule during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to interphase microtubule during vegetative growth","type":"exact"},{"name":"reduced protein localization to interphase microtubule","type":"exact"}],"termid":"FYPO:0006182"}


id: PBO:0108601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-positively_regulates_characteristic","termid":"PBO:0108601"}


id: PBO:0048650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein gamma 3","termid":"PBO:0048650"}


id: PBO:0078264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-2","termid":"PBO:0078264"}


id: PBO:0003775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf4 (predicted)","termid":"PBO:0003775"}


id: PATO:0001188
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue of the bearer's being in an inactive stage in the development of some insects, between the larval and the pupal stages.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prepupal","termid":"PATO:0001188"}


id: GO:0106438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalytic reaction :(L-glutamyl)n-L-gamma-glutamyl-L-glutamyl-[protein] + ATP + L-glutamate = (L-glutamyl)n+1-L-gamma-glutamyl-L-glutamyl-[protein] + ADP + H+ + phosphate.","definition_xrefs":["PMID:32747782","RHEA:60148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"protein-glutamic acid ligase activity, elongating","termid":"GO:0106438"}


id: GO:0045723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"positive regulation of fatty acid biosynthetic process","synonyms":[{"name":"activation of fatty acid biosynthetic process","type":"narrow"},{"name":"positive regulation of fatty acid anabolism","type":"exact"},{"name":"positive regulation of fatty acid biosynthesis","type":"exact"},{"name":"positive regulation of fatty acid formation","type":"exact"},{"name":"positive regulation of fatty acid synthesis","type":"exact"},{"name":"stimulation of fatty acid biosynthetic process","type":"narrow"},{"name":"up regulation of fatty acid biosynthetic process","type":"exact"},{"name":"up-regulation of fatty acid biosynthetic process","type":"exact"},{"name":"upregulation of fatty acid biosynthetic process","type":"exact"}],"termid":"GO:0045723"}


id: PATO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan colour and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated cyan","synonyms":[{"name":"pale cyan","type":"exact"}],"termid":"PATO:0001270"}


id: GO:0043049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain.","definition_xrefs":["GOC:go_curators","PMID:12668634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"otic vesicle formation","termid":"GO:0030916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic placode formation","termid":"GO:0043049"}


id: PBO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia-ocular apraxia 2","termid":"PBO:0001975"}


id: PBO:0047511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 3","termid":"PBO:0047511"}


id: MONDO:0003427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign lung neoplasm characterized by the presence of a fibrovascular stroma lined by cuboidal to columnar cells. Patients are usually asymptomatic and it is incidentally discovered as a pulmonary nodule during chest X-ray examination. Surgical excision is curative.","definition_xrefs":["NCIT:C3494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenoma","termid":"MONDO:0002533"},{"relation_name":"is_a","term_name":"bronchial neoplasm","termid":"MONDO:0002807"},{"relation_name":"is_a","term_name":"lung adenoma","termid":"MONDO:0003422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchus adenoma","secondary_identifiers":["DOID:5391","MEDGEN:56206","ICDO:8260/0","UMLS:C0149845"],"synonyms":[{"name":"adenoma of bronchus","type":"exact"},{"name":"adenoma of the bronchus","type":"exact"},{"name":"adenoma, bronchial, benign","type":"exact"},{"name":"bronchial adenoma","type":"exact"},{"name":"bronchial adenoma NOS (morphologic abnormality)","type":"exact"},{"name":"bronchus adenoma","type":"exact"},{"name":"lung papillary adenoma","type":"exact"},{"name":"papillary adenoma of type II pneumocytes","type":"exact"},{"name":"peripheral papillary tumor of type II pneumocytes","type":"exact"},{"name":"peripheral papillary tumour of type II pneumocytes","type":"exact"},{"name":"type II pneumocyte adenoma","type":"exact"}],"termid":"MONDO:0003427","xrefs":{"Monarch":{"xref_id":"0003427"}}}


id: GO:1990542
data:
  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id: SO:0000199
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","definition_xrefs":["NCBI:th","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_alteration","termid":"SO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation","synonyms":[{"name":"transchr","type":"related"},{"name":"translocated sequence","type":"exact"}],"termid":"SO:0000199"}


id: PBO:0063193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 6","termid":"PBO:0063193"}


id: MONDO:0008211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoleprechaunism syndrome, Patterson type is a rare, genetic, adrenal disorder characterized by congenital bronzed hyperpigmentation, cutis laxa of the hands and feet, body disproportion (comprising large hands, feet, nose and ears), hirsutism and severe intellectual disability. Patients additionally present hyperadrenocorticism, cushingoid features, premature adrenarche and diabetes mellitus, as well as skeletal deformities (not present at birth and which progress with age). There have been no further descriptions in the literature since 1981.","definition_xrefs":["Orphanet:2976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoleprechaunism syndrome, Patterson type","secondary_identifiers":["UMLS:C1868546","OMIM:169170","GARD:4259","MEDGEN:358350","MESH:C536310"],"synonyms":[{"name":"Patterson pseudoleprechaunism syndrome","type":"related"},{"name":"Patterson syndrome","type":"exact"},{"name":"Patterson's leprechaunoid syndrome","type":"related"}],"termid":"MONDO:0008211","xrefs":{"Monarch":{"xref_id":"0008211"}}}


id: PBO:0089950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm4","termid":"PBO:0089950"}


id: PBO:0055865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 12","termid":"PBO:0055865"}


id: GO:0007161
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules that do not require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"calcium-independent cell-matrix adhesion","synonyms":[{"name":"calcium-independent cell adhesion molecule activity","type":"related"}],"termid":"GO:0007161"}


id: PBO:0005499
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6 (predicted)","termid":"PBO:0005499"}


id: PBO:0051716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like 3","termid":"PBO:0051716"}


id: MONDO:0956962
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell benign neoplasm that derives from mature tissue elements or a limited amount of immature tissue elements.","definition_xrefs":["DOID:0080602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell benign neoplasm","termid":"MONDO:0850144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign teratoma","secondary_identifiers":["UMLS:C1879828","MEDGEN:361206","NCIT:C67107"],"termid":"MONDO:0956962","xrefs":{"Monarch":{"xref_id":"0956962"}}}


id: GO:1902839
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear migration along microtubule.","definition_xrefs":["GOC:TermGenie","PMID:23087209","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of nuclear migration along microtubule","termid":"GO:1902838"},{"relation_name":"negatively_regulates","term_name":"nuclear migration along microtubule","termid":"GO:0030473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of nuclear migration along microtubule","synonyms":[{"name":"down regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"down regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"down regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"down regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"down regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"down regulation of nuclear migration along microtubule","type":"exact"},{"name":"down regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"down regulation of transport of nucleus by microtubules","type":"exact"},{"name":"down regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"down-regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"down-regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"down-regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"down-regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"down-regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"down-regulation of nuclear migration along microtubule","type":"exact"},{"name":"down-regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"down-regulation of transport of nucleus by microtubules","type":"exact"},{"name":"down-regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"downregulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"downregulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"downregulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"downregulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"downregulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"downregulation of nuclear migration along microtubule","type":"exact"},{"name":"downregulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"downregulation of transport of nucleus by microtubules","type":"exact"},{"name":"downregulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"inhibition of microtubule cytoskeleton-dependent nuclear positioning","type":"narrow"},{"name":"inhibition of microtubule cytoskeleton-dependent nucleus positioning","type":"narrow"},{"name":"inhibition of microtubule-dependent nuclear positioning","type":"narrow"},{"name":"inhibition of microtubule-dependent nucleus positioning","type":"narrow"},{"name":"inhibition of microtubule-mediated nuclear migration","type":"narrow"},{"name":"inhibition of nuclear migration along microtubule","type":"narrow"},{"name":"inhibition of nuclear migration, microtubule-mediated","type":"narrow"},{"name":"inhibition of transport of nucleus by microtubules","type":"narrow"},{"name":"inhibition of transport of nucleus, microtubule-mediated","type":"narrow"},{"name":"negative regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"negative regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"negative regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"negative regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"negative regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"negative regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"negative regulation of transport of nucleus by microtubules","type":"exact"},{"name":"negative regulation of transport of nucleus, microtubule-mediated","type":"exact"}],"termid":"GO:1902839"}


id: PBO:0030494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-destabilized_iron-sulfur_cluster_binding","termid":"PBO:0030494"}


id: PBO:0063862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1 pseudogene 1","termid":"PBO:0063862"}


id: GO:0034680
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha10 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"integrin alpha10-beta1 complex","synonyms":[{"name":"ITGA10-ITGB1 complex","type":"narrow"},{"name":"alpha10-beta1 integrin complex","type":"exact"}],"termid":"GO:0034680"}


id: PBO:0047090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member B","termid":"PBO:0047090"}


id: MONDO:0000799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a crustacean food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete crustacean allergy (obsolete MONDO:0000799)","secondary_identifiers":["DOID:0060524"],"synonyms":[{"name":"allergy of crustacean food product","type":"exact"},{"name":"crustacean food product allergic disease","type":"exact"}],"termid":"MONDO:0000799","xrefs":{"Monarch":{"xref_id":"0000799"}}}


id: PBO:0049635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 38","termid":"PBO:0049635"}


id: MONDO:0018920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peripartum cardiomyopathy (PPCM) is an idiopathic, potentially fatal form of dilated cardiomyopathy that develops during the final month of pregnancy or within five months after delivery.","definition_xrefs":["Orphanet:563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-familial dilated cardiomyopathy","termid":"MONDO:0016338"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"peripartum cardiomyopathy","secondary_identifiers":["ICD9:674.54","ICD10CM:O90.3","ICD9:674.5","UMLS:C0877208","GARD:220","MEDGEN:163756","DOID:9997","icd11.foundation:1218807936","MedDRA:10049430","NCIT:C171602","SCTID:62377009","EFO:0002628"],"synonyms":[{"name":"Meadows' syndrome","type":"related"},{"name":"antepartum peripartum cardiomyopathy","type":"exact"},{"name":"peripartum cardiomyopathy","type":"exact"},{"name":"postpartum cardiomyopathy","type":"exact"},{"name":"postpartum peripartum cardiomyopathy","type":"exact"}],"termid":"MONDO:0018920","xrefs":{"Monarch":{"xref_id":"0018920"}}}


id: MONDO:0019593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XX disorder of sex development induced by fetal androgens excess (obsolete MONDO:0019593)","secondary_identifiers":["Orphanet:90776"],"synonyms":[{"name":"46,XX DSD induced by fetal androgens excess","type":"exact"},{"name":"46,XX DSD induced by foetal androgens excess","type":"exact"}],"termid":"MONDO:0019593","xrefs":{"Monarch":{"xref_id":"0019593"}}}


id: GO:0009836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fruit ripening process that involves a burst of respiration and ethylene (ethene) evolution at the onset.","definition_xrefs":["GOC:lr","ISBN:0521587840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fruit ripening","termid":"GO:0009835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit ripening, climacteric","termid":"GO:0009836"}


id: PBO:0060685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-deacetylase and N-sulfotransferase 1","termid":"PBO:0060685"}


id: PBO:0072709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 3","termid":"PBO:0072709"}


id: GO:1903078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to plasma membrane.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:11602640","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell periphery","termid":"GO:1904377"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to plasma membrane","secondary_identifiers":["GO:0090004","GO:1905965"],"synonyms":[{"name":"activation of protein localisation in plasma membrane","type":"narrow"},{"name":"activation of protein localization in plasma membrane","type":"narrow"},{"name":"activation of protein localization to plasma membrane","type":"narrow"},{"name":"activation of protein targeting to plasma membrane","type":"narrow"},{"name":"activation of protein-plasma membrane targeting","type":"narrow"},{"name":"positive regulation of establishment of protein localisation in plasma membrane","type":"related"},{"name":"positive regulation of establishment of protein localization to plasma membrane","type":"related"},{"name":"positive regulation of protein localisation in plasma membrane","type":"exact"},{"name":"positive regulation of protein localization in plasma membrane","type":"exact"},{"name":"positive regulation of protein targeting to plasma membrane","type":"related"},{"name":"positive regulation of protein-plasma membrane targeting","type":"related"},{"name":"up regulation of protein localisation in plasma membrane","type":"exact"},{"name":"up regulation of protein localization in plasma membrane","type":"exact"},{"name":"up regulation of protein localization to plasma membrane","type":"exact"},{"name":"up regulation of protein targeting to plasma membrane","type":"related"},{"name":"up regulation of protein-plasma membrane targeting","type":"related"},{"name":"up-regulation of protein localisation in plasma membrane","type":"exact"},{"name":"up-regulation of protein localization in plasma membrane","type":"exact"},{"name":"up-regulation of protein localization to plasma membrane","type":"exact"},{"name":"up-regulation of protein targeting to plasma membrane","type":"related"},{"name":"up-regulation of protein-plasma membrane targeting","type":"related"},{"name":"upregulation of protein localisation in plasma membrane","type":"exact"},{"name":"upregulation of protein localization in plasma membrane","type":"exact"},{"name":"upregulation of protein localization to plasma membrane","type":"exact"},{"name":"upregulation of protein targeting to plasma membrane","type":"related"},{"name":"upregulation of protein-plasma membrane targeting","type":"related"}],"termid":"GO:1903078"}


id: PBO:0058699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6827","termid":"PBO:0058699"}


id: PBO:0046460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial stromal interaction 1","termid":"PBO:0046460"}


id: PBO:0059878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 1","termid":"PBO:0059878"}


id: PBO:0045392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 3","termid":"PBO:0045392"}


id: GO:0120124
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that primes vacuolar or vesicular membranes for fusion with other intracellular membranes, by promoting the dissociation of cis-SNARE complexes.","definition_xrefs":["GOC:lnp","PMID:9015301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"membrane fusion priming complex","synonyms":[{"name":"GATE-16 complex","type":"exact"},{"name":"LMA1 complex","type":"exact"}],"termid":"GO:0120124"}


id: GO:0106070
data:
  {"annotated_genes":["SJAG_00266","SJAG_01245","SJAG_02481","SJAG_02426","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100197,92515,116122,107722,91851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an adenylate cyclase-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:hjd","PMID:19246489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of adenylate cyclase-activating G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0106070","terms_by_termid":{"GO:0110034":null}}


id: PBO:0026926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation_at_RxxS_site","termid":"PBO:0026926"}


id: MONDO:1012247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone dysplasia, non-human animal","termid":"MONDO:1011982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia, domestic cat","secondary_identifiers":["OMIA:000881-9685"],"termid":"MONDO:1012247","xrefs":{"Monarch":{"xref_id":"1012247"}}}


id: PBO:0117043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX antisense RNA 1","termid":"PBO:0117043"}


id: GO:0046069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyclic GMP, guanosine 3',5'-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"cyclic nucleotide catabolic process","termid":"GO:0009214"},{"relation_name":"is_a","term_name":"cGMP metabolic process","termid":"GO:0046068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cGMP catabolic process","synonyms":[{"name":"cGMP breakdown","type":"exact"},{"name":"cGMP catabolism","type":"exact"},{"name":"cGMP degradation","type":"exact"}],"termid":"GO:0046069"}


id: SO:1001259
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by similarity to EST or cDNA data.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_EST_or_cDNA","termid":"SO:0000909"},{"relation_name":"is_a","term_name":"CDS_supported_by_sequence_similarity_data","termid":"SO:1001251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_EST_or_cDNA_data","synonyms":[{"name":"CDS supported by EST or cDNA data","type":"exact"}],"termid":"SO:1001259"}


id: GO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome.","definition_xrefs":["GOC:clt","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"pericentriolar material","termid":"GO:0000242"}


id: FYPO:0005035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation","termid":"FYPO:0004422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during nitrogen starvation","synonyms":[{"name":"normal protein phosphorylation during nitrogen depletion","type":"exact"},{"name":"normal protein phosphorylation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0005035"}


id: MONDO:0024429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorienting neuropsychological condition that affects perception. People experience size distortion such as micropsia, macropsia, pelopsia, or teleopsia. Size distortion may occur of other sensory modalities.","definition_xrefs":["Wikipedia:Alice_in_Wonderland_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vision disorder","termid":"MONDO:0021084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alice in Wonderland syndrome","secondary_identifiers":["UMLS:C0854348","MEDGEN:473310","MESH:D062026","NCIT:C116362"],"termid":"MONDO:0024429","xrefs":{"Monarch":{"xref_id":"0024429"}}}


id: GO:0030937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XVII) chains; type XVII collagen triple helices span the plasma membrane and associate with hemidesmosomes and the basal lamina where they bind laminin.","definition_xrefs":["PMID:19693541","ISBN:0721639976","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane collagen trimer","termid":"GO:0030936"},{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"is_a","term_name":"hemidesmosome associated protein complex","termid":"GO:0098733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"collagen type XVII trimer","termid":"GO:0030937"}


id: GO:0099604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ions by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ligand-gated calcium channel activity","termid":"GO:0099604"}


id: PBO:0076779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEA domain transcription factor 2","termid":"PBO:0076779"}


id: SO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which the T3 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T3_RNA_Polymerase_Promoter","synonyms":[{"name":"T3 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001206"}


id: GO:0035709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a memory T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["CL:0000813","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell activation","termid":"GO:0035709"}


id: PBO:0028309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_methylglyoxal","termid":"PBO:0028309"}


id: GO:0016011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that includes alpha- and beta-dystroglycan, which are alternative products of the same gene; the laminin-binding component of the dystrophin-associated glycoprotein complex, providing a link between the subsarcolemmal cytoskeleton (in muscle cells) and the extracellular matrix. Alpha-dystroglycan is an extracellular protein binding to alpha-laminin and to beta-dystroglycan; beta-dystroglycan is a transmembrane protein which binds alpha-dystroglycan and dystrophin.","definition_xrefs":["PMID:16710609","PMID:15117830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystrophin-associated glycoprotein complex","termid":"GO:0016010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"dystroglycan complex","termid":"GO:0016011"}


id: PBO:0056239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog, exon junction complex subunit","termid":"PBO:0056239"}


id: PBO:0051696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80D antisense RNA 1","termid":"PBO:0051696"}


id: PBO:0053153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase B pseudogene 2","termid":"PBO:0053153"}


id: MONDO:0015909
data:
  {"annotated_genes":["SJAG_00166","SJAG_04746","SJAG_01512","SJAG_02585","SJAG_02339","SJAG_01621","SJAG_05979","SJAG_04414","SJAG_04066","SJAG_00465","SJAG_02046","SJAG_05180","SJAG_01296","SJAG_03919","SJAG_02358","SJAG_00468","SJAG_04491","SJAG_02335","SJAG_01588","SJAG_03762","SJAG_04478","SJAG_02894","SJAG_00846","SJAG_03254","SJAG_03335","SJAG_00921","SJAG_02597","SJAG_04695","SJAG_04168","SJAG_02749","SJAG_01840","SJAG_02708","SJAG_02556","SJAG_01410","SJAG_01366","SJAG_02802","SJAG_00611","SJAG_00487","SJAG_04881","SJAG_04204","SJAG_02340","SJAG_00749","SJAG_01568","SJAG_02280","SJAG_02904","SJAG_00640"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013851"},{"annotations":[85291,85292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007110"},{"annotations":[86065,86064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013217"},{"annotations":[86954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013964"},{"annotations":[85588,85589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014245"},{"annotations":[86164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014394"},{"annotations":[85100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010493"},{"annotations":[86193,86194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011639"},{"annotations":[86588,86589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044309"},{"annotations":[86592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044310"},{"annotations":[85822,85823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032668"},{"annotations":[85824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032669"},{"annotations":[85826,85827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032670"},{"annotations":[85543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031071"},{"annotations":[85623,85622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012529"},{"annotations":[86527,86526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012924"},{"annotations":[86524,86525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012925"},{"annotations":[86542,86543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012937"},{"annotations":[86540,86541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012938"},{"annotations":[86544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012939"},{"annotations":[86066,86067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013216"},{"annotations":[86090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013248"},{"annotations":[86514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013499"},{"annotations":[84796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014108"},{"annotations":[86769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014986"},{"annotations":[86773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014987"},{"annotations":[86770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014985"},{"annotations":[85092,85091,87053,87054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012197"},{"annotations":[86680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[85734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"Anemia resulting from bone marrow failure (aplastic or hypoplastic bone marrow). The production of erythroblasts and red cells is markedly decreased, and it may be associated with decreased production of granulocytes (granulocytopenia) and platelets (thrombocytopenia) as well. Aplastic anemia may be idiopathic or secondary due to bone marrow damage by toxins, radiation, or immunologic factors.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"telomere syndrome","termid":"MONDO:0100137"},{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00487":null,"SJAG_00611":null,"SJAG_00640":null,"SJAG_00749":null,"SJAG_00846":null,"SJAG_00921":null,"SJAG_01296":null,"SJAG_01366":null,"SJAG_01410":null,"SJAG_01512":null,"SJAG_01568":null,"SJAG_01588":null,"SJAG_01621":null,"SJAG_01840":null,"SJAG_02046":null,"SJAG_02280":null,"SJAG_02335":null,"SJAG_02339":null,"SJAG_02340":null,"SJAG_02358":null,"SJAG_02556":null,"SJAG_02585":null,"SJAG_02597":null,"SJAG_02708":null,"SJAG_02749":null,"SJAG_02802":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03254":null,"SJAG_03335":null,"SJAG_03762":null,"SJAG_03919":null,"SJAG_04066":null,"SJAG_04168":null,"SJAG_04204":null,"SJAG_04414":null,"SJAG_04478":null,"SJAG_04491":null,"SJAG_04695":null,"SJAG_04746":null,"SJAG_04881":null,"SJAG_05180":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"aplastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C2870","ICD9:284.8","Orphanet:182040","DOID:12449","MEDGEN:8063","MESH:D000741","NANDO:1200295","NANDO:1200301","NANDO:2100201","NANDO:2200693","ICD9:284.9","SCTID:306058006","UMLS:C0002874","GARD:20234"],"termid":"MONDO:0015909","terms_by_termid":{"MONDO:0007110":null,"MONDO:0010438":null,"MONDO:0010493":null,"MONDO:0011639":null,"MONDO:0012197":null,"MONDO:0012529":null,"MONDO:0012924":null,"MONDO:0012925":null,"MONDO:0012937":null,"MONDO:0012938":null,"MONDO:0012939":null,"MONDO:0013216":null,"MONDO:0013217":null,"MONDO:0013248":null,"MONDO:0013499":null,"MONDO:0013851":null,"MONDO:0013964":null,"MONDO:0014108":null,"MONDO:0014166":null,"MONDO:0014245":null,"MONDO:0014394":null,"MONDO:0014985":null,"MONDO:0014986":null,"MONDO:0014987":null,"MONDO:0031071":null,"MONDO:0032668":null,"MONDO:0032669":null,"MONDO:0032670":null,"MONDO:0044309":null,"MONDO:0044310":null},"xrefs":{"Monarch":{"xref_id":"0015909"}}}


id: MONDO:0006856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from mesothelial cells. Mesothelial cells are the lining cells of the pleura and peritoneum. -- 2003","definition_xrefs":["NCIT:C3786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesothelial neoplasm","secondary_identifiers":["UMLS:C3714739","MEDGEN:811450","EFO:1001044","ICD10CM:C45-C49","MESH:D018301"],"synonyms":[{"name":"mesothelial neoplasm","type":"exact"},{"name":"mesothelial tumor","type":"exact"},{"name":"mesothelial tumour","type":"exact"}],"termid":"MONDO:0006856","xrefs":{"Monarch":{"xref_id":"0006856"}}}


id: MONDO:0024982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections in animals with bacteria of the genus salmonella.","definition_xrefs":["MESH:D012481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease, non-human animal","termid":"MONDO:0700050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salmonella infections, animal","synonyms":[{"name":"Salmonella infection, animal","type":"related"},{"name":"animal Salmonella infection","type":"related"},{"name":"animal Salmonella infections","type":"related"},{"name":"infection, animal Salmonella","type":"related"},{"name":"infections, animal Salmonella","type":"related"},{"name":"salmonellosis, non-human animal","type":"exact"}],"termid":"MONDO:0024982","xrefs":{"Monarch":{"xref_id":"0024982"}}}


id: PBO:0070848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 27","termid":"PBO:0070848"}


id: GO:0002808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"}


id: PBO:0046860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas associated factor family member 2 pseudogene 1","termid":"PBO:0046860"}


id: MONDO:0007684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete granulomatous disease, chronic, autosomal dominant type (obsolete MONDO:0007684)","termid":"MONDO:0007684","xrefs":{"Monarch":{"xref_id":"0007684"}}}


id: MONDO:0009306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency with skin granulomas","secondary_identifiers":["MESH:C567115","Orphanet:157949","UMLS:C2673536","GARD:13587","MEDGEN:435945","OMIM:233650","DOID:0112253"],"synonyms":[{"name":"CCHIDG","type":"related"},{"name":"CID due to RAG 1/2 deficiency","type":"exact"},{"name":"combined cellular and humoral immune defects with granulomas","type":"related"},{"name":"combined immunodeficiency due to RAG 1/2 deficiency","type":"exact"}],"termid":"MONDO:0009306","xrefs":{"Monarch":{"xref_id":"0009306"}}}


id: PBO:0070251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 194 pseudogene","termid":"PBO:0070251"}


id: MONDO:1011926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shivers, non-human animal","secondary_identifiers":["OMIA:000676"],"termid":"MONDO:1011926","xrefs":{"Monarch":{"xref_id":"1011926"}}}


id: PBO:0071460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 1","termid":"PBO:0071460"}


id: PR:Q9P6R3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13E7.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6R3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13E7.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.07","synonyms":[{"name":"Spom972h-SPBC13E7.07","type":"exact"}],"termid":"PR:Q9P6R3"}


id: GO:1905100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptosome assembly.","definition_xrefs":["GO_REF:0000058","GOC:BHF_miRNA","PMID:26265044","GOC:TermGenie","GOC:bc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"apoptosome assembly","termid":"GO:0097314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of apoptosome assembly","synonyms":[{"name":"regulation of apoptosome formation","type":"exact"}],"termid":"GO:1905100"}


id: PR:000027505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase HOG1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitogen-activated protein kinase HOG1","termid":"PR:000027499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sty1/UnMod","pombase_gene_id":"SPAC24B11.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: mitogen-activated protein kinase sty1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-HOG1/UnMod","type":"exact"},{"name":"sty1/UnMod","type":"exact"}],"termid":"PR:000027505"}


id: FYPO:0005366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitosis","synonyms":[{"name":"abolished protein phosphorylation during M phase of mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during mitotic M phase","type":"related"},{"name":"protein phosphorylation abolished during mitosis","type":"exact"}],"termid":"FYPO:0005366"}


id: MONDO:0958176
data:
  {"annotated_genes":["SJAG_04601"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85394],"is_not":false,"summary":null,"term":"MONDO:0958176"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculopharyngeal muscular dystrophy","termid":"MONDO:0008116"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngeal muscular dystrophy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84942","OMIM:164300"],"termid":"MONDO:0958176","terms_by_termid":{"MONDO:0958176":null},"xrefs":{"Monarch":{"xref_id":"0958176"}}}


id: MONDO:0003722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the internal auditory canal.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skull base meningioma","termid":"MONDO:0002998"},{"relation_name":"excluded_subClassOf","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"middle cranial fossa meningioma","termid":"MONDO:0003121"},{"relation_name":"is_a","term_name":"inner ear neoplasm","termid":"MONDO:0024320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal auditory canal meningioma","secondary_identifiers":["MEDGEN:235221","NCIT:C5307","UMLS:C1334227","DOID:5990"],"synonyms":[{"name":"internal acoustic meatus meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of internal acoustic meatus","type":"exact"},{"name":"meningioma of internal auditory canal","type":"exact"},{"name":"meningioma of the internal auditory canal","type":"exact"}],"termid":"MONDO:0003722","xrefs":{"Monarch":{"xref_id":"0003722"}}}


id: GO:0031123
data:
  {"annotated_genes":["SJAG_02668","SJAG_01521","SJAG_02720","SJAG_02622","SJAG_03233","SJAG_01867","SJAG_02383","SJAG_00435","SJAG_04321","SJAG_04153","SJAG_04885","SJAG_02370","SJAG_02350","SJAG_06586","SJAG_02991","SJAG_01836","SJAG_03500","SJAG_01818","SJAG_04754","SJAG_04946","SJAG_00961","SJAG_02865","SJAG_03624","SJAG_01175","SJAG_01191","SJAG_00854","SJAG_01176","SJAG_00997","SJAG_04587","SJAG_01791","SJAG_04818","SJAG_01412","SJAG_00081","SJAG_04527","SJAG_00527","SJAG_03761","SJAG_02037","SJAG_02621","SJAG_02156","SJAG_03745","SJAG_00943","SJAG_04174","SJAG_02288","SJAG_04084","SJAG_01704","SJAG_00448","SJAG_01798","SJAG_03923","SJAG_03853","SJAG_01599","SJAG_04824","SJAG_02993","SJAG_04427","SJAG_01713","SJAG_00195","SJAG_03179","SJAG_04942","SJAG_04022","SJAG_03126","SJAG_02551","SJAG_02725","SJAG_03594","SJAG_03226","SJAG_04006","SJAG_04369","SJAG_03257"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71396,79512,79552,107544],"is_not":false,"summary":null,"term":"GO:0031123"},{"annotations":[109949,73139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000494"},{"annotations":[79969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"},{"annotations":[107447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180034"},{"annotations":[93233,92589,67428,87397,104460,92698,98852,93211,104750,111705,117962,90387,100059,109567,111048,111319,88148,104498,96942,97891,113316,115038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180010"},{"annotations":[74315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000461"},{"annotations":[77312,72186,98699,71018,97000,71382,74872,89739,101833,106221,70468,115184,115625,79176,107205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000467"},{"annotations":[114175,70509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000965"},{"annotations":[87498,80093,69713,117667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[64941,98265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031124"},{"annotations":[77317,115189,70476,75965,72993,74877,74231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071051"},{"annotations":[88136,117834,71051,117722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990431"},{"annotations":[91628,117860,92592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043628"},{"annotations":[71052,117837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990432"},{"annotations":[92593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031126"},{"annotations":[115190,103579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034472"},{"annotations":[98235,98700,92791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042780"},{"annotations":[70093,74702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001680"},{"annotations":[71013,71377,72181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034473"},{"annotations":[101926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034474"},{"annotations":[77309,74869,71378,88140,75961,74227,72989,71014,76481,72182,73487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034475"},{"annotations":[89740,71379,72183,71015,98701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034476"},{"annotations":[79156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034477"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 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3'-end processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA 3' end processing","type":"exact"}],"termid":"GO:0031123","terms_by_termid":{"GO:0000461":null,"GO:0000467":null,"GO:0000494":null,"GO:0000495":null,"GO:0000965":null,"GO:0001680":null,"GO:0031123":null,"GO:0031124":null,"GO:0031126":null,"GO:0034472":null,"GO:0034473":null,"GO:0034474":null,"GO:0034475":null,"GO:0034476":null,"GO:0034477":null,"GO:0042780":null,"GO:0043628":null,"GO:0071051":null,"GO:0180010":null,"GO:0180034":null,"GO:1990180":null,"GO:1990431":null,"GO:1990432":null}}


id: MONDO:0012832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the IRF5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 14","secondary_identifiers":["OMIM:612245","MEDGEN:436860","UMLS:C2677100","MESH:C567383","DOID:0110895"],"synonyms":[{"name":"IBD14","type":"exact"},{"name":"IRF5 inflammatory bowel disease","type":"exact"},{"name":"inflammatory bowel disease 14","type":"exact"},{"name":"inflammatory bowel disease caused by mutation in IRF5","type":"exact"},{"name":"inflammatory bowel disease type 14","type":"exact"}],"termid":"MONDO:0012832","xrefs":{"Monarch":{"xref_id":"0012832"}}}


id: PBO:0083621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2 ubiquitin-conjugating enzyme; involved in the error-free DNA postreplication repair pathway; interacts with Mms2p to assemble ubiquitin chains at the Ub Lys-63 residue; DNA damage triggers redistribution from the cytoplasm to the nucleus","termid":"PBO:0083621"}


id: FYECO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium containing a high concentration of glucose (~5-8% typically) as carbon source, salts and water.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high glucose MM","synonyms":[{"name":"high glucose minimal medium","type":"exact"}],"termid":"FYECO:0000016"}


id: PBO:0030882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization_during_vegetative_growth","termid":"PBO:0030882"}


id: MONDO:1011091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypospadias that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias, non-human animal","termid":"MONDO:1010269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias, dog","secondary_identifiers":["OMIA:001187-9615"],"termid":"MONDO:1011091","xrefs":{"Monarch":{"xref_id":"1011091"}}}


id: PBO:0081598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 4","termid":"PBO:0081598"}


id: PBO:0034689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4-K16_acetylation","termid":"PBO:0034689"}


id: GO:0044028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An decrease in the epigenetic methylation of cytosine and adenosine residues in DNA.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA hypomethylation (obsolete GO:0044028)","termid":"GO:0044028"}


id: MONDO:0003306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurofibroma characterized by the presence of cellular pleomorphism.","definition_xrefs":["NCIT:C41426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical neurofibroma","secondary_identifiers":["UMLS:C1510961","MEDGEN:267320","DOID:5153"],"synonyms":[{"name":"atypical neurofibroma","type":"exact"}],"termid":"MONDO:0003306","xrefs":{"Monarch":{"xref_id":"0003306"}}}


id: MONDO:0002795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system embryonal tumor, not otherwise specified that occurs in adults.","definition_xrefs":["NCIT:C5411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult central nervous system primitive neuroectodermal neoplasm","secondary_identifiers":["UMLS:C1332196","MEDGEN:231039","DOID:3865"],"synonyms":[{"name":"adult CNS PNET","type":"exact"},{"name":"adult CNS primitive neuroectodermal neoplasm","type":"exact"},{"name":"adult CNS primitive neuroectodermal tumor","type":"exact"},{"name":"adult CNS primitive neuroectodermal tumour","type":"exact"},{"name":"adult central nervous system primitive neuroectodermal neoplasm","type":"exact"},{"name":"adult central nervous system primitive neuroectodermal tumor","type":"exact"},{"name":"adult central nervous system primitive neuroectodermal tumour","type":"exact"},{"name":"adult central primitive neuroectodermal neoplasm","type":"exact"},{"name":"adult central primitive neuroectodermal tumor","type":"exact"},{"name":"adult central primitive neuroectodermal tumour","type":"exact"},{"name":"central nervous system primitive neuroectodermal neoplasm of adults","type":"exact"}],"termid":"MONDO:0002795","xrefs":{"Monarch":{"xref_id":"0002795"}}}


id: MONDO:0013247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fanconi syndrome in which the cause of the disease is a mutation in the SLC34A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary Fanconi syndrome","termid":"MONDO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Fanconi renotubular syndrome 2","secondary_identifiers":["MEDGEN:462002","OMIM:613388","UMLS:C3150652","DOID:0080758","GARD:15655"],"synonyms":[{"name":"FRTS2","type":"related"},{"name":"Fanconi renotubular syndrome 2","type":"exact"},{"name":"Fanconi renotubular syndrome type 2","type":"exact"},{"name":"Fanconi syndrome caused by mutation in SLC34A1","type":"exact"},{"name":"SLC34A1 Fanconi syndrome","type":"exact"}],"termid":"MONDO:0013247","xrefs":{"Monarch":{"xref_id":"0013247"}}}


id: MONDO:0000500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the tongue. It usually presents as a painful ulcerated or nodular lesion. The size of the tumor and the status of the lymph nodes are the most important factors that determine prognosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue cancer","termid":"MONDO:0004631"},{"relation_name":"is_a","term_name":"oral cavity squamous cell carcinoma","termid":"MONDO:0004958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"tongue squamous cell carcinoma","secondary_identifiers":["SCTID:276952000","UMLS:C0349566","DOID:0050865","NCIT:C4648","MEDGEN:91153"],"synonyms":[{"name":"scc of the tongue","type":"exact"},{"name":"scc of tongue","type":"exact"},{"name":"squamous cell carcinoma of the tongue","type":"exact"},{"name":"squamous cell carcinoma of tongue","type":"exact"},{"name":"tongue scc","type":"exact"},{"name":"tongue squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0000500","xrefs":{"Monarch":{"xref_id":"0000500"}}}


id: PBO:0029410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_mitotic_G2/M_transition_checkpoint_signaling","termid":"PBO:0029410"}


id: FYPO:0002643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing clotrimazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on clotrimazole","synonyms":[{"name":"normal cell population growth in presence of clotrimazole","type":"exact"},{"name":"normal cell population growth on clotrimazole","type":"exact"},{"name":"normal cellular response to clotrimazole","type":"related"},{"name":"normal vegetative cell population growth on clotrimazole","type":"exact"}],"termid":"FYPO:0002643"}


id: GO:1900078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"},{"relation_name":"positively_regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to insulin stimulus","synonyms":[{"name":"activation of cellular response to insulin stimulus","type":"narrow"},{"name":"up regulation of cellular response to insulin stimulus","type":"exact"},{"name":"up-regulation of cellular response to insulin stimulus","type":"exact"},{"name":"upregulation of cellular response to insulin stimulus","type":"exact"}],"termid":"GO:1900078"}


id: PBO:0048503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 3","termid":"PBO:0048503"}


id: PBO:0077362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 102","termid":"PBO:0077362"}


id: PBO:0088041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); catalytic subunit of SCF ubiquitin-protein ligase complex (together with Skp1p, Rbx1p, Cdc53p, and an F-box protein) that regulates cell cycle progression by targeting key substrates for degradation; protein abundance increases in response to DNA replication stress; human CDC34 functionally complements the thermosensitivity of the cdc34-2 mutant","termid":"PBO:0088041"}


id: GO:0030111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of the Wnt signal transduction pathway.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway","secondary_identifiers":["GO:0008590","Reactome:R-HSA-8939256"],"synonyms":[{"name":"regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"regulation of frizzled signaling pathway","type":"exact"},{"name":"regulation of frizzled signalling pathway","type":"exact"}],"termid":"GO:0030111"}


id: SO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element II (CDEII) is part a conserved region of the centromere, consisting of a consensus region that is AT-rich and ~ 75-100 bp in length.","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_II","synonyms":[{"name":"CDEII","type":"exact"},{"name":"centromere DNA Element II","type":"exact"}],"termid":"SO:0001494"}


id: GO:1901526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitophagy.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"is_a","term_name":"positive regulation of autophagy of mitochondrion","termid":"GO:1903599"},{"relation_name":"positively_regulates","term_name":"mitophagy","termid":"GO:0000423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitophagy","synonyms":[{"name":"activation of macromitophagy","type":"narrow"},{"name":"positive regulation of macromitophagy","type":"exact"},{"name":"up regulation of macromitophagy","type":"exact"},{"name":"up-regulation of macromitophagy","type":"exact"},{"name":"upregulation of macromitophagy","type":"exact"}],"termid":"GO:1901526"}


id: PBO:0062472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 163 pseudogene","termid":"PBO:0062472"}


id: GO:1904195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of granulosa cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22383759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"granulosa cell proliferation","termid":"GO:1990739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of granulosa cell proliferation","termid":"GO:1904195"}


id: GO:0004117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 3',5'-cyclic AMP + H2O = AMP + H+ and 3',5'-cyclic GMP + H2O = GMP + H+; this activity is activated by binding to calcium-bound calmodulin.","definition_xrefs":["PMID:9419816","PMID:8557689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-AMP phosphodiesterase activity","termid":"GO:0004115"},{"relation_name":"is_a","term_name":"3',5'-cyclic-GMP phosphodiesterase activity","termid":"GO:0047555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"calmodulin-activated dual specificity 3',5'-cyclic-GMP, 3',5'-cyclic-AMP phosphodiesterase activity","secondary_identifiers":["Reactome:R-HSA-111955"],"synonyms":[{"name":"calmodulin-activated cyclic-nucleotide dual specificity phosphodiesterase activity","type":"related"},{"name":"calmodulin-dependent cyclic-nucleotide phosphodiesterase activity","type":"broad"}],"termid":"GO:0004117"}


id: PBO:0064514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit K pseudogene 1","termid":"PBO:0064514"}


id: PBO:0090513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosyltransferase 34 family","termid":"PBO:0090513"}


id: MONDO:0003024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the breast.","definition_xrefs":["NCIT:C5184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast angiosarcoma","secondary_identifiers":["DOID:4511","ONCOTREE:BA","UMLS:C1332614","MESH:C536368","MEDGEN:272382","GARD:9974"],"synonyms":[{"name":"BA","type":"related"},{"name":"angiosarcoma (disease) of breast","type":"exact"},{"name":"angiosarcoma of breast","type":"exact"},{"name":"angiosarcoma of the breast","type":"exact"},{"name":"breast angiosarcoma","type":"exact"},{"name":"breast angiosarcoma (disease)","type":"exact"},{"name":"breast hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma of breast","type":"exact"},{"name":"hemangiosarcoma of the breast","type":"exact"}],"termid":"MONDO:0003024","xrefs":{"Monarch":{"xref_id":"0003024"}}}


id: PBO:0087111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal stalk protein P1 alpha; involved in the interaction between translational elongation factors and the ribosome; free (non-ribosomal) P1 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; accumulation of P1 in the cytoplasm is regulated by phosphorylation and interaction with the P2 stalk component","termid":"PBO:0087111"}


id: PBO:0030653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_methylamine","termid":"PBO:0030653"}


id: GO:0003035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in a carotid body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of increased carbon dioxide by chemoreceptor signaling","termid":"GO:0003021"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by carotid body chemoreceptor signaling","termid":"GO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by carotid body chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by carotid body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003035"}


id: PBO:0062406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 31 pseudogene","termid":"PBO:0062406"}


id: GO:1990476
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool that remain unreleased even after prolonged stimulation causes a saturating degree of vesicular turnover. 50-80% of the total number of synaptic vesicles at a resting terminal bouton are in this pool.","definition_xrefs":["GOC:pad","PMID:22745285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"synaptic vesicle, resting pool","synonyms":[{"name":"reserve pool of synaptic vesicles","type":"exact"},{"name":"resting pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990476"}


id: GO:0004941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta2-adrenergic receptors.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-adrenergic receptor activity","termid":"GO:0004939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta2-adrenergic receptor activity","synonyms":[{"name":"beta2 adrenoceptor","type":"exact"}],"termid":"GO:0004941"}


id: PBO:0001041
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Pmk1","termid":"PBO:0001041"}


id: GO:0060967
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of gene silencing by RNA. Gene silencing by RNA is the process in which RNA molecules inactivate expression of target genes.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gene silencing by regulatory ncRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of gene silencing by RNA","type":"related"},{"name":"negative regulation of gene silencing by ncRNA","type":"related"}],"termid":"GO:0060967","terms_by_termid":{"GO:0060906":null}}


id: PBO:0036067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methyltransferase_activity_(H3-K9_specific)_activity","termid":"PBO:0036067"}


id: PBO:0078855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 3","termid":"PBO:0078855"}


id: PBO:0040786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed X-linked 3","termid":"PBO:0040786"}


id: PBO:0081919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 888","termid":"PBO:0081919"}


id: PBO:0004631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase (predicted)","termid":"PBO:0004631"}


id: GO:1901687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutathione derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione derivative biosynthetic process","secondary_identifiers":["Reactome:R-HSA-156590"],"synonyms":[{"name":"glutathione derivative anabolism","type":"exact"},{"name":"glutathione derivative biosynthesis","type":"exact"},{"name":"glutathione derivative formation","type":"exact"},{"name":"glutathione derivative synthesis","type":"exact"}],"termid":"GO:1901687"}


id: PBO:0054113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1478","termid":"PBO:0054113"}


id: GO:0062062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oligosaccharyltransferase complex.","definition_xrefs":["PMID:12887896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"oligosaccharyltransferase complex binding","termid":"GO:0062062"}


id: GO:0051105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA ligation, the re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA ligation (obsolete GO:0051105)","termid":"GO:0051105"}


id: PATO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000341 sporophytic compatability value (obsolete PATO:0000341)","termid":"PATO:0000341"}


id: GO:0003939
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72465],"is_not":false,"summary":null,"term":"GO:0003939"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-iditol + NAD+ = L-sorbose + NADH + H+. Acts on a number of sugar alcohols, including (but not limited to) L-iditol, D-glucitol, D-xylitol, and D-galactitol.","definition_xrefs":["PMID:13373783","EC:1.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-iditol 2-dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:L-IDITOL-2-DEHYDROGENASE-RXN","Reactome:R-HSA-5652195"],"synonyms":[{"name":"L-iditol (sorbitol) dehydrogenase activity","type":"related"},{"name":"L-iditol:NAD oxidoreductase activity","type":"related"},{"name":"L-iditol:NAD+ 5-oxidoreductase activity","type":"related"},{"name":"NAD+-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-dependent sorbitol dehydrogenase activity","type":"related"},{"name":"NAD-sorbitol dehydrogenase","type":"related"},{"name":"glucitol dehydrogenase activity","type":"related"},{"name":"polyol dehydrogenase activity","type":"broad"},{"name":"sorbitol dehydrogenase activity","type":"related"}],"termid":"GO:0003939","terms_by_termid":{"GO:0003939":null}}


id: PBO:0040853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 6","termid":"PBO:0040853"}


id: MONDO:0001304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"renal hypertension","termid":"MONDO:0001105"},{"relation_name":"is_a","term_name":"hypertensive nephropathy","termid":"MONDO:0024633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"benign hypertensive renal disease","secondary_identifiers":["ICD9:403.10","MEDGEN:510035","ICD9:403.1","SCTID:193003","UMLS:C0155596","DOID:11520"],"synonyms":[{"name":"hypertensive renal disease, benign","type":"exact"},{"name":"hypertensive renal disease, benign, without mention of renal failure","type":"exact"}],"termid":"MONDO:0001304","xrefs":{"Monarch":{"xref_id":"0001304"}}}


id: PR:O94485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.04 gene.","definition_xrefs":["UniProtKB:O94485","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C417.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.04","synonyms":[{"name":"Spom972h-SPCC417.04","type":"exact"}],"termid":"PR:O94485"}


id: FYPO:0002950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of N-acetyl-D-glucosaminate measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased N-acetyl-D-glucosaminate level during G0","synonyms":[{"name":"increased N-acetyl-D-glucosaminate accumulation during G0","type":"related"},{"name":"increased N-acetyl-D-glucosaminate level during cell quiescence","type":"exact"},{"name":"increased N-acetyl-D-glucosaminate level during quiescence","type":"exact"}],"termid":"FYPO:0002950"}


id: PBO:0060768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 12","termid":"PBO:0060768"}


id: MONDO:0019778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Smith-Fineman-Myers syndrome (obsolete MONDO:0019778)","termid":"MONDO:0019778","xrefs":{"Monarch":{"xref_id":"0019778"}}}


id: PBO:0061889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPCML intronic transcript 2","termid":"PBO:0061889"}


id: MONDO:0012196
data:
  {"annotated_genes":["SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85096],"is_not":false,"summary":null,"term":"MONDO:0012196"}]},"cv_name":"mondo","definition":"Any auditory neuropathy in which the cause of the disease is a mutation in the DIAPH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"},{"relation_name":"is_a","term_name":"auditory neuropathy","termid":"MONDO:0021944"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant auditory neuropathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060690","MESH:C563790","UMLS:C1836743","MEDGEN:322984","OMIM:609129","GARD:18127"],"synonyms":[{"name":"AUNA1","type":"exact"},{"name":"DIAPH3 auditory neuropathy","type":"exact"},{"name":"NSDAN","type":"exact"},{"name":"auditory neuropathy caused by mutation in DIAPH3","type":"exact"},{"name":"auditory neuropathy, autosomal dominant, 1","type":"related"},{"name":"auditory neuropathy, autosomal dominant, type 1","type":"exact"},{"name":"auditory neuropathy, nonsyndromic dominant","type":"related"},{"name":"autosomal dominant auditory neuropathy type 1","type":"exact"},{"name":"nonsyndromic dominant auditory neuropathy","type":"exact"}],"termid":"MONDO:0012196","terms_by_termid":{"MONDO:0012196":null},"xrefs":{"Monarch":{"xref_id":"0012196"}}}


id: GO:1905555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood vessel branching.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","PMID:23201774","GOC:nc","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of angiogenesis","termid":"GO:0045766"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"regulation of blood vessel branching","termid":"GO:1905553"},{"relation_name":"positively_regulates","term_name":"branching involved in blood vessel morphogenesis","termid":"GO:0001569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel branching","synonyms":[{"name":"activation of branching involved in blood vessel morphogenesis","type":"narrow"},{"name":"activation of patterning of blood vessels","type":"narrow"},{"name":"positive regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"up regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"up regulation of patterning of blood vessels","type":"exact"},{"name":"up-regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"up-regulation of patterning of blood vessels","type":"exact"},{"name":"upregulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"upregulation of patterning of blood vessels","type":"exact"}],"termid":"GO:1905555"}


id: FYPO:0007872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which bulk plasma membrane flow from the cell poles to lateral regions does not occur.","definition_xrefs":["PMID:34533984","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane organization","termid":"FYPO:0000813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished plasma membrane flow from cell pole to lateral region","synonyms":[{"name":"abolished bulk plasma membrane flow from cell pole to lateral region","type":"exact"},{"name":"abolished plasma membrane flow from cell pole to lateral region during mitotic cell cycle","type":"related"},{"name":"abolished plasma membrane flow from cell pole to lateral region during vegetative growth","type":"exact"},{"name":"plasma membrane flow from cell pole to lateral region abolished","type":"exact"}],"termid":"FYPO:0007872"}


id: GO:0090679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell differentiation process that is a part of a reversible switch of a cell from one cell type or form to another, at a frequency above the expected frequency for somatic mutations.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"reversible differentiation","termid":"GO:0090677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}


id: FYPO:0006653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of flap-structured DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"normal flap-structured DNA binding","termid":"FYPO:0006653"}


id: PBO:0030604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-coflocculating_cells","termid":"PBO:0030604"}


id: PBO:0065829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6C antisense RNA 1","termid":"PBO:0065829"}


id: MONDO:0010317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked, with or without seizures, arx-related","secondary_identifiers":["MESH:C564502","MEDGEN:208681","MESH:C563150","OMIM:300419","UMLS:C0796244","GARD:5614","DOID:0112021"],"synonyms":[{"name":"ARX-related intellectual disability","type":"related"},{"name":"MRX52","type":"related"},{"name":"MRXARX","type":"related"},{"name":"intellectual developmental disorder, X-linked 29, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 29","type":"related"},{"name":"intellectual disability, X-linked 32","type":"related"},{"name":"intellectual disability, X-linked 33","type":"related"},{"name":"intellectual disability, X-linked 38","type":"related"},{"name":"intellectual disability, X-linked 43","type":"related"},{"name":"intellectual disability, X-linked 52","type":"related"},{"name":"intellectual disability, X-linked 54","type":"related"},{"name":"intellectual disability, X-linked 76","type":"related"},{"name":"intellectual disability, X-linked 87","type":"related"},{"name":"intellectual disability, X-linked, with or without seizures, ARX-related","type":"related"},{"name":"intellectual disability, X-linked, with or without seizures, arx-RELATED","type":"related"},{"name":"mental retardation, X-linked 29","type":"related"},{"name":"mental retardation, X-linked 32","type":"related"},{"name":"mental retardation, X-linked 33","type":"related"},{"name":"mental retardation, X-linked 38","type":"related"},{"name":"mental retardation, X-linked 43","type":"related"},{"name":"mental retardation, X-linked 52","type":"related"},{"name":"mental retardation, X-linked 54","type":"related"},{"name":"mental retardation, X-linked 76","type":"related"},{"name":"mental retardation, X-linked 87","type":"related"},{"name":"mental retardation, X-linked, with or without seizures, arx-RELATED","type":"related"},{"name":"mental retardation, X-linked, with or without seizures, arx-related","type":"related"}],"termid":"MONDO:0010317","xrefs":{"Monarch":{"xref_id":"0010317"}}}


id: GO:0018475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-2-methyl-5-isopropylhexa-2,5-dienal + NAD+ + H2O = NADH + H+ + trans-2-methyl-5-isopropylhexa-2,5-dienoic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-2-methyl-5-isopropylhexa-2,5-dienal dehydrogenase activity (obsolete GO:0018475)","termid":"GO:0018475"}


id: PBO:0034324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_developmental_potential_involving","termid":"PBO:0034324"}


id: FYPO:0003903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells are grown at a temperature lower than standard.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability at low temperature","synonyms":[{"name":"decreased viability at low temperature","type":"exact"},{"name":"loss of cell population viability at low temperature","type":"exact"},{"name":"loss of viability at restrictive temperature","type":"related"},{"name":"reduced viability at low temperature","type":"exact"}],"termid":"FYPO:0003903"}


id: GO:1990504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of molecules (e.g. neuropeptides, insulin-related peptides or neuromodulators such as serotonin and dopamine) contained within a membrane-bounced dense core granule by fusion of the granule with the plasma membrane of a cell in response to increased cytosolic calcium levels.","definition_xrefs":["GOC:kmv","PMID:17553987","PMID:24653208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"},{"relation_name":"is_a","term_name":"dense core granule localization","termid":"GO:0032253"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"dense core granule exocytosis","synonyms":[{"name":"dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1990504"}


id: GO:0021656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 2. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 2 morphogenesis","termid":"GO:0021655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 structural organization","synonyms":[{"name":"rhombomere 2 structural organisation","type":"exact"}],"termid":"GO:0021656"}


id: MONDO:0023050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectrodactyly cardiopathy dysmorphism","secondary_identifiers":["UMLS:C2931127","MESH:C536187","MEDGEN:419342"],"synonyms":[{"name":"Van Den Ende Brunner syndrome","type":"related"},{"name":"ectrodactyly of lower limbs, congenital heart defect and characteristic facies","type":"related"}],"termid":"MONDO:0023050","xrefs":{"Monarch":{"xref_id":"0023050"}}}


id: PBO:0039881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 40","termid":"PBO:0039881"}


id: GO:0061486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fructose from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:10735857","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity fructose transmembrane transporter activity","synonyms":[{"name":"high affinity fructose transmembrane transporter activity","type":"exact"}],"termid":"GO:0061486"}


id: PBO:0077563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM269 divergent transcript","termid":"PBO:0077563"}


id: PBO:0085392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane Mg(2+) transporter; expression and turnover are regulated by Mg(2+) concentration; overexpression confers increased tolerance to Al(3+) and Ga(3+) ions; magnesium transport defect of the null mutant is functionally complemented by either of the human genes MAGT1 and TUSC3 that are not orthologous to ALR1","termid":"PBO:0085392"}


id: MONDO:1010131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A debilitating condition characterized by a fibrocollagenous membrane encasing the small intestine, resulting in recurrent small bowel obstructions.","definition_xrefs":["PMID:24133081","PMID:30065556","PMID:39631118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal obstruction","termid":"MONDO:0004565"},{"relation_name":"is_a","term_name":"peritonitis","termid":"MONDO:1010128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"encapsulating peritoneal sclerosis","synonyms":[{"name":"EPS","type":"exact"},{"name":"abdominal cocoon syndrome","type":"exact"},{"name":"peritonitis chronica fibrosa incapsulata","type":"exact"},{"name":"sclerosing encapsulating peritonitis","type":"exact"}],"termid":"MONDO:1010131","xrefs":{"Monarch":{"xref_id":"1010131"}}}


id: PBO:0067953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 255","termid":"PBO:0067953"}


id: MOD:01370
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 6x(13)C,1x(15)N labeled residue.","definition_xrefs":["PubMed:11857757","PubMed:11999733","Unimod:695","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,1x(15)N labeled residue","synonyms":[{"name":"13C(6) 15N(1) Silac label","type":"related"},{"name":"Label:13C(6)15N(1)","type":"related"}],"termid":"MOD:01370"}


id: PBO:0049835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high density lipoprotein binding protein","termid":"PBO:0049835"}


id: PBO:0029958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquinol-cytochrome-c_reductase_activity","termid":"PBO:0029958"}


id: PBO:0027953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_pyridoxamine_5'-phosphate_level","termid":"PBO:0027953"}


id: PR:O59727
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.07c gene.","definition_xrefs":["UniProtKB:O59727","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein PBDC1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.07c","synonyms":[{"name":"Spom972h-SPBC3E7.07c","type":"exact"}],"termid":"PR:O59727"}


id: MONDO:0022471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"aortic valve stenosis","termid":"MONDO:0042981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"childhood aortic valve stenosis","secondary_identifiers":["GARD:744"],"synonyms":[{"name":"aortic valves stenosis of the child","type":"related"}],"termid":"MONDO:0022471","xrefs":{"Monarch":{"xref_id":"0022471"}}}


id: GO:0007370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a ventral indentation (furrow) from the blastoderm epithelium, which is internalized to form a tube in the interior of the embryo, marking the start of gastrulation.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral furrow formation","termid":"GO:0007370"}


id: PBO:0027666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere_inner_repeat","termid":"PBO:0027666"}


id: MONDO:0013403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any visceral heterotaxy in which the cause of the disease is a mutation in the ACVR2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 4, autosomal","secondary_identifiers":["OMIM:613751","UMLS:C3151057","MEDGEN:462407"],"synonyms":[{"name":"ACVR2B visceral heterotaxy","type":"exact"},{"name":"HTX4","type":"related"},{"name":"heterotaxy, visceral, 4, autosomal","type":"exact"},{"name":"visceral heterotaxy caused by mutation in ACVR2B","type":"exact"}],"termid":"MONDO:0013403","xrefs":{"Monarch":{"xref_id":"0013403"}}}


id: MONDO:0016706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, slow-growing neuroepithelial neoplasm of uncertain origin affecting adults. It is located in the third ventricle. It is characterized by the presence of epithelioid cells which express GFAP, and mucinous stroma which contains lymphoplasmacytic infiltrates.","definition_xrefs":["NCIT:C5592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"diencephalic cancer","termid":"MONDO:0002786"},{"relation_name":"is_a","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"grade II glioma","termid":"MONDO:0021639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"chordoid glioma of the third ventricle","secondary_identifiers":["GARD:20715","MEDGEN:232956","ICDO:9444/1","SCTID:715900001","DOID:3773","ONCOTREE:CHGL","Orphanet:251674","UMLS:C1322252","DOID:3774"],"synonyms":[{"name":"chordoid glioma","type":"exact"},{"name":"chordoid glioma (morphologic abnormality)","type":"exact"},{"name":"chordoid glioma of 3rd ventricle","type":"exact"},{"name":"chordoid glioma of the 3rd ventricle","type":"exact"},{"name":"chordoid glioma of the third ventricle","type":"exact"},{"name":"chordoid glioma of the third ventricle (WHO grade II)","type":"exact"},{"name":"chordoid glioma of third ventricle","type":"exact"},{"name":"third ventricle chordoid glioma","type":"exact"}],"termid":"MONDO:0016706","xrefs":{"Monarch":{"xref_id":"0016706"}}}


id: PBO:0073121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEBOX homeobox","termid":"PBO:0073121"}


id: PBO:0077679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 10","termid":"PBO:0077679"}


id: MONDO:0033620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myofibrillar myopathy 10","secondary_identifiers":["UMLS:C5436656","OMIM:619040","DOID:0112108","MEDGEN:1769385"],"synonyms":[{"name":"MFM10","type":"exact"}],"termid":"MONDO:0033620","xrefs":{"Monarch":{"xref_id":"0033620"}}}


id: GO:1901222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the non-canonical NF-kappaB signaling cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"non-canonical NF-kappaB signal transduction","termid":"GO:0038061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of non-canonical NF-kappaB signal transduction","secondary_identifiers":["GO:0042348","GO:0042345"],"synonyms":[{"name":"NF-KB import into nucleus","type":"narrow"},{"name":"NF-kappaB import into nucleus","type":"narrow"},{"name":"regulation of NF-kappaB import into nucleus","type":"narrow"},{"name":"regulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"regulation of NIK/NF-kappaB signaling","type":"exact"},{"name":"regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"regulation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"regulation of p52-dependent NF-kappaB signaling","type":"narrow"}],"termid":"GO:1901222"}


id: PBO:0082534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; expressed under anaerobic conditions and required for anaerobic growth; transcription is also induced by cold shock; member of the Srp1p/Tip1p family of serine-alanine-rich proteins","termid":"PBO:0082534"}


id: GO:0075244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oospore formation, a process in which male and female gametangia develop and fuse to form a thick-walled resting spore of oomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"regulates","term_name":"oospore formation","termid":"GO:0075243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of oospore formation","termid":"GO:0075244"}


id: PBO:0081147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP69 zinc finger protein","termid":"PBO:0081147"}


id: GO:0098582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vocalisation behavior that is innate, i.e. that does not need to be learned in order to occur.","definition_xrefs":["GOC:dos","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vocalization behavior","termid":"GO:0071625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate vocalization behavior","termid":"GO:0098582"}


id: FYPO:0008063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases abnormally, or does not change, immediately following osmotic shock. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PMID:36200871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased immediate intracellular calcium spike following osmotic shock","termid":"FYPO:0008063"}


id: RO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has_fused_element y iff: there exists some z : x has_part z, z homologous_to y, and y is a distinct element, the boundary between x and z is largely fiat","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_fused_element","termid":"RO:0002374"}


id: PR:Q9P7C3
data:
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id: PBO:0074624
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 22","termid":"PBO:0074624"}


id: PBO:0002838
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id: GO:0071081
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id: GO:0006469
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id: PBO:0075602
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id: PBO:0089425
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id: GO:0000398
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id: PBO:0078840
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id: PBO:0090726
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L24","termid":"PBO:0090726"}


id: PBO:0054842
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2256","termid":"PBO:0054842"}


id: GO:0016776
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id: MONDO:0012830
data:
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id: PBO:0048428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine amidinotransferase","termid":"PBO:0048428"}


id: MONDO:0009059
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id: GO:0039714
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id: GO:1905277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial tube formation.","definition_xrefs":["GOC:bhm","PMID:25745997","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of epithelial tube formation","termid":"GO:1905276"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial tube formation","synonyms":[{"name":"down regulation of epithelial tube formation","type":"exact"},{"name":"down-regulation of epithelial tube formation","type":"exact"},{"name":"downregulation of epithelial tube formation","type":"exact"},{"name":"inhibition of epithelial tube formation","type":"narrow"}],"termid":"GO:1905277"}


id: GO:0006663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether lipid biosynthetic process","termid":"GO:0008611"},{"relation_name":"is_a","term_name":"platelet activating factor metabolic process","termid":"GO:0046469"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"platelet activating factor biosynthetic process","synonyms":[{"name":"PAF biosynthesis","type":"exact"},{"name":"PAF biosynthetic process","type":"exact"},{"name":"platelet activating factor anabolism","type":"exact"},{"name":"platelet activating factor biosynthesis","type":"exact"},{"name":"platelet activating factor formation","type":"exact"},{"name":"platelet activating factor synthesis","type":"exact"}],"termid":"GO:0006663"}


id: MONDO:0019065
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971004"}]},"cv_name":"mondo","definition":"A disorder characterized by the localized or diffuse accumulation of amyloid protein in various anatomic sites. It may be primary, due to clonal plasma cell proliferations; secondary, due to long standing infections, chronic inflammatory disorders, or malignancies; or familial. It may affect the nerves, skin, tongue, joints, heart, liver, spleen, kidneys and adrenal glands.","definition_xrefs":["NCIT:C2868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteostasis deficiencies","termid":"MONDO:0021179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"amyloidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0011034","ICD9:277.3","MESH:D000686","Orphanet:69","ONCOTREE:MIDDA","SCTID:17602002","ICD9:277.30","GARD:18676","MEDGEN:272","DOID:9120","icd11.foundation:2078467774","NANDO:2200138","EFO:1001875","MedDRA:10002022","UMLS:C0002726"],"synonyms":[{"name":"amyloid","type":"exact"},{"name":"amyloid disease","type":"exact"},{"name":"amyloidoses","type":"exact"},{"name":"amyloidosis","type":"exact"},{"name":"amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0019065","terms_by_termid":{"MONDO:0971004":null},"xrefs":{"Monarch":{"xref_id":"0019065"}}}


id: MONDO:0013334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal encasement syndrome is a rare, lethal developmental defect during embryogenesis characterized by severe fetal malformations, including craniofacial dysmorphism (abnormal cyst in the cranial region, hypoplastic eyeballs, two orifices in the nasal region separated by a nasal septum, abnormal orifice replacing the mouth), omphalocele and immotile, hypoplastic limbs encased under an abnormal, transparent, membrane-like skin. Additional features include absence of adnexal structures of the skin on the outer aspect of the limbs, as well as underdeveloped skeletal muscles and bones. Association with tetralogy of Fallot, horse-shoe kidneys and diaphragm and lung lobulation defects is reported.","definition_xrefs":["Orphanet:465824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cocoon syndrome","secondary_identifiers":["DOID:0060647","MEDGEN:462241","OMIM:613630","GARD:17823","UMLS:C3150891"],"synonyms":[{"name":"cocoon syndrome","type":"exact"},{"name":"fetal encasement syndrome","type":"exact"},{"name":"foetal encasement syndrome","type":"exact"}],"termid":"MONDO:0013334","xrefs":{"Monarch":{"xref_id":"0013334"}}}


id: PBO:0085828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; GFP-fusion protein localizes to the mitochondria; null mutant is viable and displays reduced frequency of mitochondrial genome loss","termid":"PBO:0085828"}


id: GO:0003802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of one Arg-Ile bond in factor X to form factor Xa, and on factor IX to form factor IXa beta.","definition_xrefs":["PMID:12496253"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor VIIa activity (obsolete GO:0003802)","synonyms":[{"name":"activated blood coagulation factor VII","type":"related"},{"name":"blood coagulation factor VII activity","type":"exact"},{"name":"blood-coagulation factor VIIa","type":"related"},{"name":"coagulation factor VIIa activity","type":"exact"}],"termid":"GO:0003802"}


id: PR:Q9P7A1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PITH domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02656","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITH domain-containing protein P35G2.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.02","secondary_identifiers":["UniProtKB:Q9P7A1"],"synonyms":[{"name":"Spom972h-PITHD1","type":"exact"}],"termid":"PR:Q9P7A1"}


id: GO:0061484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of hematopoietic stem cells within a population of cells.","definition_xrefs":["GOC:dph","PMID:21508411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell homeostasis","termid":"GO:0061484"}


id: PBO:0036064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_protein_exchange_in_actomyosin_contractile_ring","termid":"PBO:0036064"}


id: MONDO:0012927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"1q41q42 microdeletion syndrome is a chromosomal anomaly characterized by a severe developmental delay and/or intellectual disability, typical facial dysmorphic features, brain anomalies, seizures, cleft palate, clubfeet, nail hypoplasia and congenital heart disease.","definition_xrefs":["Orphanet:250999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"},{"relation_name":"is_a","term_name":"chromosome 1q deletion","termid":"MONDO:0022756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"chromosome 1q41-q42 deletion syndrome","secondary_identifiers":["MEDGEN:382704","OMIM:612530","SCTID:716515000","GARD:3738","DOID:0060412","UMLS:C2675857"],"synonyms":[{"name":"1q41-q42 deletion syndrome","type":"related"},{"name":"1q41-q42 microdeletion syndrome","type":"exact"},{"name":"1q41q42 microdeletion syndrome","type":"exact"},{"name":"Del(1)(q41q42)","type":"exact"},{"name":"chromosome 1q41-q42 deletion syndrome","type":"exact"},{"name":"chromosome 1q41-q42 deletion syndrome, isolated cases","type":"exact"},{"name":"deletion 1q41-q42","type":"related"},{"name":"holoprosencephaly 10","type":"related"},{"name":"monosomy 1q41-q42","type":"exact"},{"name":"monosomy 1q41q42","type":"exact"}],"termid":"MONDO:0012927","xrefs":{"Monarch":{"xref_id":"0012927"}}}


id: FYPO:0005932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at long terminal repeat (LTR) regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:25798942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased nucleosome occupancy at long terminal repeat","synonyms":[{"name":"decreased nucleosome occupancy at LTR","type":"exact"},{"name":"decreased nucleosome occupancy at long terminal repeat during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at long terminal repeat during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in long terminal repeat","type":"exact"},{"name":"reduced nucleosome occupancy at long terminal repeat","type":"exact"}],"termid":"FYPO:0005932"}


id: PR:O59739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bag102 gene.","definition_xrefs":["UniProtKB:O59739","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator 1B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.03c","synonyms":[{"name":"BAG-1B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bag102","type":"exact"}],"termid":"PR:O59739"}


id: PBO:0030806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_cortex","termid":"PBO:0030806"}


id: PBO:0018052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0018052"}


id: PBO:0088996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Ltc1","termid":"PBO:0088996"}


id: MONDO:0015548
data:
  {"annotated_genes":["SJAG_16459","SJAG_00421","SJAG_01229","SJAG_01317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85230,85231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008695"},{"annotations":[85533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[87036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease and related disorders","termid":"MONDO:0000167"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_01229":null,"SJAG_01317":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Huntington disease-like syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:777988","Orphanet:158266","UMLS:C3711380","GARD:20029","ICD9:333.99","MESH:C580174","SCTID:702376003"],"synonyms":[{"name":"Huntington disease phenocopy syndrome","type":"exact"}],"termid":"MONDO:0015548","terms_by_termid":{"MONDO:0008458":null,"MONDO:0008695":null,"MONDO:0011781":null},"xrefs":{"Monarch":{"xref_id":"0015548"}}}


id: MOD:01571
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01571"}


id: PBO:0072786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma antigen 1","termid":"PBO:0072786"}


id: GO:0042078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell to produce a daughter stem cell and a daughter germ cell, which will divide to form the gametes.","definition_xrefs":["PMID:2279698","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line stem cell division","secondary_identifiers":["GO:0048131"],"synonyms":[{"name":"germ-line stem cell renewal","type":"exact"}],"termid":"GO:0042078"}


id: PBO:0052400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 1","termid":"PBO:0052400"}


id: GO:0016814
data:
  {"annotated_genes":["SJAG_04681","SJAG_03275","SJAG_01997","SJAG_04380","SJAG_04189","SJAG_03771","SJAG_04123","SJAG_04156","SJAG_04711","SJAG_00352","SJAG_01673","SJAG_02400","SJAG_00376","SJAG_01054","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"},{"annotations":[69543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004126"},{"annotations":[69703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004132"},{"annotations":[116915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008835"},{"annotations":[69671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003934"},{"annotations":[58661,60065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003935"},{"annotations":[78774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008892"},{"annotations":[69583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003937"},{"annotations":[75628,76338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004477"},{"annotations":[60024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004635"},{"annotations":[73511,100869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[71308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2.","definition_xrefs":["EC:3.5.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00352":null,"SJAG_00376":null,"SJAG_01054":null,"SJAG_01673":null,"SJAG_01997":null,"SJAG_02400":null,"SJAG_03275":null,"SJAG_03771":null,"SJAG_04123":null,"SJAG_04156":null,"SJAG_04189":null,"SJAG_04380":null,"SJAG_04681":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016814","terms_by_termid":{"GO:0003876":null,"GO:0003934":null,"GO:0003935":null,"GO:0003937":null,"GO:0004126":null,"GO:0004132":null,"GO:0004477":null,"GO:0004635":null,"GO:0008835":null,"GO:0008892":null,"GO:0043829":null,"GO:0052717":null}}


id: PBO:0070903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 11","termid":"PBO:0070903"}


id: MONDO:0014161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux 7","secondary_identifiers":["UMLS:C3809337","MEDGEN:815667","GARD:18424","OMIM:615390"],"synonyms":[{"name":"VUR7","type":"exact"},{"name":"vesicoureteral reflux 7","type":"exact"}],"termid":"MONDO:0014161","xrefs":{"Monarch":{"xref_id":"0014161"}}}


id: PBO:0069897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1188, pseudogene","termid":"PBO:0069897"}


id: PBO:0028044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_cytoplasmic_microtubule_polymerization","termid":"PBO:0028044"}


id: PBO:0070155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 69 pseudogene","termid":"PBO:0070155"}


id: GO:0046315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphocreatine, a phosphagen of creatine which is synthesized and broken down by creatine phosphokinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphocreatine metabolic process","termid":"GO:0006603"},{"relation_name":"is_a","term_name":"phosphagen catabolic process","termid":"GO:0042397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphocreatine catabolic process","synonyms":[{"name":"phosphocreatine breakdown","type":"exact"},{"name":"phosphocreatine catabolism","type":"exact"},{"name":"phosphocreatine degradation","type":"exact"}],"termid":"GO:0046315"}


id: PBO:0046811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F11 receptor","termid":"PBO:0046811"}


id: GO:0015583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein N-phosphohistidine + beta-glucoside(out) = protein histidine + beta-glucoside phosphate(in). The beta-glucoside may be arbutin, salicin or cellobiose.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-glucoside [arbutin-salicin-cellobiose] permease activity (obsolete GO:0015583)","synonyms":[{"name":"beta-glucoside [arbutin-salicin-cellobiose] permease activity","type":"exact"}],"termid":"GO:0015583"}


id: PBO:0029820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores_and_germinated_spores_with_elongated_germ_tubes_(obsolete_FYPO:0002417)","termid":"PBO:0029820"}


id: PR:O94705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox9 gene.","definition_xrefs":["UniProtKB:O94705","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.05c","synonyms":[{"name":"Spom972h-cox9","type":"exact"},{"name":"cytochrome c oxidase polypeptide VIIA (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94705"}


id: PBO:0060774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B8","termid":"PBO:0060774"}


id: PBO:0081929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 971, pseudogene","termid":"PBO:0081929"}


id: GO:0047437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-oxalocrotonate = CO2 + 2-oxopent-4-enoate.","definition_xrefs":["MetaCyc:4.1.1.77-RXN","EC:4.1.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"4-oxalocrotonate decarboxylase activity","secondary_identifiers":["RHEA:24260","UM-BBD_reactionID:r1435"],"synonyms":[{"name":"4-oxalocrotonate carboxy-lyase (2-oxopent-4-enoate-forming)","type":"related"},{"name":"4-oxalocrotonate carboxy-lyase activity","type":"related"}],"termid":"GO:0047437"}


id: MONDO:0011685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polysubstance abuse, susceptibility to","secondary_identifiers":["UMLS:C1847831","OMIM:606581","MEDGEN:339856"],"synonyms":[{"name":"PSAB","type":"related"},{"name":"drug addiction, susceptibility to","type":"related"},{"name":"polysubstance abuse, susceptibility to","type":"exact"}],"termid":"MONDO:0011685","xrefs":{"Monarch":{"xref_id":"0011685"}}}


id: FYPO:0004645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","termid":"FYPO:0004644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","termid":"FYPO:0004645"}


id: GO:0070806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phialide development, a process that leads to the formation of phialides. Phialides are specialized cells that bud from the ends of metulae on the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of conidiophore development","termid":"GO:0070794"},{"relation_name":"is_a","term_name":"regulation of phialide development","termid":"GO:0070805"},{"relation_name":"negatively_regulates","term_name":"phialide development","termid":"GO:0070790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phialide development","termid":"GO:0070806"}


id: MONDO:0015765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital myopathy with cores (obsolete MONDO:0015765)","secondary_identifiers":["Orphanet:172976"],"termid":"MONDO:0015765","xrefs":{"Monarch":{"xref_id":"0015765"}}}


id: PATO:0002315
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's resembling the end of a brush with a multitude of bristles.","definition_xrefs":["PATOC:BF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brush-like shape","termid":"PATO:0002315"}


id: PBO:0064848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B","termid":"PBO:0064848"}


id: MONDO:0010152
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86734],"is_not":false,"summary":null,"term":"MONDO:0010152"}]},"cv_name":"mondo","definition":"Trichomegaly-retina pigmentary degeneration-dwarfism syndrome, also known as Oliver-McFarlane syndrome, is an extremely rare genetic disorder characterized by hair abnormalities, severe chorioretinal atrophy, hypopituitarism, short stature, and intellectual disability.","definition_xrefs":["Orphanet:3363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichomegaly-retina pigmentary degeneration-dwarfism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:275400","MEDGEN:338532","SCTID:719944006","MESH:C536554","UMLS:C1848745","DOID:0111271","GARD:5266"],"synonyms":[{"name":"OMCS","type":"related"},{"name":"Oliver McFarlane syndrome","type":"related"},{"name":"Oliver-McFarlane syndrome","type":"exact"},{"name":"eyelashes, long with intellectual disability","type":"related"},{"name":"eyelashes, long, with intellectual disability","type":"related"},{"name":"eyelashes, long, with mental retardation","type":"related"},{"name":"long eyelashes-intellectual disability syndrome","type":"exact"},{"name":"trichomegaly with intellectual disability, dwarfism and pigmentary degeneration of retina","type":"related"},{"name":"trichomegaly with intellectual disability, dwarfism, and pigmentary Degeneration of retina","type":"related"},{"name":"trichomegaly with mental retardation, dwarfism, and pigmentary Degeneration of retina","type":"related"}],"termid":"MONDO:0010152","terms_by_termid":{"MONDO:0010152":null},"xrefs":{"Monarch":{"xref_id":"0010152"}}}


id: SO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of vegetative replication in plasmids and phages.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriV","synonyms":[{"name":"origin of vegetative replication","type":"exact"}],"termid":"SO:0000952"}


id: SO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of TNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"TNA","termid":"SO:0001190"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Threose_nucleic_acid"],"synonyms":[{"name":"TNA oligo","type":"exact"},{"name":"threose nucleic acid","type":"exact"}],"termid":"SO:0001191"}


id: PBO:0112968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyprenol reductase Dfg10","termid":"PBO:0112968"}


id: GO:0045257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The enzyme that catalyzes the oxidation of succinate and ubiquinone to fumarate and ubiquinol; involved in aerobic respiration, repressed in anaerobic respiration.","definition_xrefs":["GOC:kd","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete succinate dehydrogenase complex (ubiquinone) (obsolete GO:0045257)","termid":"GO:0045257"}


id: MONDO:0800407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked retinopathy caused by variants in the NYX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"NYX-related retinopathy","termid":"MONDO:0800407","xrefs":{"Monarch":{"xref_id":"0800407"}}}


id: MONDO:0014156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the SCN2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 14","secondary_identifiers":["UMLS:C3809312","MEDGEN:815642","OMIM:615378","GARD:15955"],"synonyms":[{"name":"ATFB14","type":"related"},{"name":"SCN2B familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 14","type":"exact"},{"name":"atrial fibrillation, familial, type 14","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in SCN2B","type":"exact"}],"termid":"MONDO:0014156","xrefs":{"Monarch":{"xref_id":"0014156"}}}


id: PBO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf12","termid":"PBO:0004207"}


id: GO:0044354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded, uncoated intracellular vesicle formed by the process of macropinocytosis.","definition_xrefs":["PMID:14732047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinosome","termid":"GO:0044352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"macropinosome","termid":"GO:0044354"}


id: MONDO:0800350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 4","secondary_identifiers":["UMLS:C3150682","MEDGEN:462032"],"synonyms":[{"name":"LVNC4","type":"exact"}],"termid":"MONDO:0800350","xrefs":{"Monarch":{"xref_id":"0800350"}}}


id: MOD:00637
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-arginine residue with a (13)C,3x(2)H labeled methyl group to form a 1x(13)C,3x(2)H labeled monomethylated L-arginine.","definition_xrefs":["Unimod:329"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(13)C,3x(2)H labeled monomethylated L-arginine","synonyms":[{"name":"Methyl:2H(3)13C(1)","type":"related"},{"name":"monomethylated arginine","type":"related"}],"termid":"MOD:00637"}


id: MONDO:0022810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Combarros Calleja Leno syndrome","termid":"MONDO:0022810","xrefs":{"Monarch":{"xref_id":"0022810"}}}


id: PBO:0054761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2173","termid":"PBO:0054761"}


id: GO:0031820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y11 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"P2Y11 nucleotide receptor binding","synonyms":[{"name":"P2Y11 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031820"}


id: MONDO:0022949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"defective apolipoprotein b-100","secondary_identifiers":["GARD:1720"],"termid":"MONDO:0022949","xrefs":{"Monarch":{"xref_id":"0022949"}}}


id: GO:0009132
data:
  {"annotated_genes":["SJAG_00839","SJAG_04334","SJAG_02247","SJAG_00605","SJAG_04849","SJAG_02785","SJAG_06621","SJAG_02369","SJAG_03373","SJAG_00885","SJAG_02135","SJAG_04495","SJAG_03660","SJAG_02038","SJAG_03977","SJAG_02874","SJAG_06622","SJAG_03828","SJAG_02107","SJAG_04665","SJAG_01310","SJAG_04192","SJAG_04048","SJAG_03676","SJAG_02796","SJAG_00027","SJAG_05314","SJAG_00461","SJAG_03903","SJAG_02009","SJAG_00685","SJAG_00779","SJAG_01595","SJAG_02945","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99606],"is_not":false,"summary":null,"term":"GO:0009132"},{"annotations":[71713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[97749,103136,105217,109143,105587,105218,109142,116092,105219,109141,109146,94284,103393,109147,77638,98022,94773,105588,109145,109144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[80200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[92200,107012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[95244,92201,107013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[64166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046710"},{"annotations":[88367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[75818,72857],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009134"},{"annotations":[69868],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[113058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009191"},{"annotations":[80199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[76058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00779":null,"SJAG_00839":null,"SJAG_00885":null,"SJAG_01310":null,"SJAG_01595":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02874":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_04849":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009132","terms_by_termid":{"GO:0006110":null,"GO:0006172":null,"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0006256":null,"GO:0009132":null,"GO:0009134":null,"GO:0009191":null,"GO:0045820":null,"GO:0046704":null,"GO:0046705":null,"GO:0046710":null,"GO:0061613":null,"GO:0061621":null}}


id: PR:Q7Z9I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C188.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.09c","synonyms":[{"name":"Spom972h-pfl4","type":"exact"}],"termid":"PR:Q7Z9I1"}


id: SO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the micronuclei of a cell.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micronuclear_sequence","synonyms":[{"name":"micronuclear sequence","type":"exact"}],"termid":"SO:0000084"}


id: GO:0034993
data:
  {"annotated_genes":["SJAG_05196","SJAG_04558","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112583],"is_not":false,"summary":null,"term":"GO:0034993"},{"annotations":[96472,102567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A nuclear membrane protein complex which connects the nuclear outer and inner membranes together, and links links the nuclear lumen to cytoplasmic microtubules during meiosis.","definition_xrefs":["PMID:18692466","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane microtubule tethering complex","termid":"GO:0106094"},{"relation_name":"part_of","term_name":"microtubule organizing center attachment site","termid":"GO:0034992"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"meiotic nuclear membrane microtubule tethering complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"LINC complex","type":"exact"},{"name":"LInker of Nucleoskeleton and Cytoskeleton complex","type":"exact"},{"name":"SUN-KASH complex","type":"exact"}],"termid":"GO:0034993","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: GO:2001260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of semaphorin-plexin signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of semaphorin-plexin signaling pathway","synonyms":[{"name":"regulation of semaphorin-plexin signalling pathway","type":"exact"}],"termid":"GO:2001260"}


id: PBO:0002018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methyltransferase (predicted)","termid":"PBO:0002018"}


id: PBO:0060788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit C2","termid":"PBO:0060788"}


id: PBO:0038665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase family member 3","termid":"PBO:0038665"}


id: PBO:0053348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 237","termid":"PBO:0053348"}


id: PBO:0051268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa constant","termid":"PBO:0051268"}


id: GO:0047113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a quinone + an aldehyde + H2O = a carboxylate + a quinol + H+.","definition_xrefs":["RHEA:13881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldehyde dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.2.5.2","MetaCyc:1.2.99.3-RXN"],"synonyms":[{"name":"aldehyde dehydrogenase (acceptor) activity","type":"related"},{"name":"aldehyde dehydrogenase (pyrroloquinoline-quinone)","type":"related"},{"name":"aldehyde:(pyrroloquinoline-quinone) oxidoreductase activity","type":"related"}],"termid":"GO:0047113"}


id: RO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x lumen_of y iff x is the space or substance that is part of y and does not cross any of the inner membranes or boundaries of y that is maximal with respect to the volume of the convex hull.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumen_of","termid":"RO:0002571"}


id: MONDO:0014413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Orofaciodigital syndrome type 14 is a rare subtype of orofaciodigital syndrome, with autosomal recessive inheritance and C2CD3 mutations, characterized by severe microcephaly, trigonocephaly, severe intellectual disability and micropenis, in addition to oral, facial and digital malformations (gingival frenulae, lingual hamartomas, cleft/lobulated tongue, cleft palate, telecanthus, up-slanting palpebral fissures, microretrognathia, postaxial polydactyly of hands and duplication of hallux). Corpus callosum agenesis and vermis hypoplasia with molar tooth sign, on brain imaging, are also associated.","definition_xrefs":["Orphanet:434179"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome type 14","secondary_identifiers":["OMIM:615948","UMLS:C4706604","GARD:13655","MEDGEN:1635470","DOID:0060958","SCTID:763837007"],"synonyms":[{"name":"C2CD3 orofaciodigital syndrome","type":"exact"},{"name":"OFD14","type":"exact"},{"name":"microcephaly-cerebral malformation-orofaciodigital syndrome","type":"exact"},{"name":"oral-facial-digital syndrome type 14","type":"exact"},{"name":"orofaciodigital syndrome 14","type":"related"},{"name":"orofaciodigital syndrome XIV","type":"related"},{"name":"orofaciodigital syndrome caused by mutation in C2CD3","type":"exact"},{"name":"orofaciodigital syndrome type 14","type":"exact"}],"termid":"MONDO:0014413","xrefs":{"Monarch":{"xref_id":"0014413"}}}


id: PBO:0057165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320c-1","termid":"PBO:0057165"}


id: PBO:0075073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 123","termid":"PBO:0075073"}


id: MONDO:0968990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary central precocious puberty in male","termid":"MONDO:0958356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genetic central precocious puberty in male","secondary_identifiers":["UMLS:C5816761","MEDGEN:1853128","Orphanet:650097"],"termid":"MONDO:0968990","xrefs":{"Monarch":{"xref_id":"0968990"}}}


id: SO:0000465
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome deletion whereby a chromosome is generated by recombination between two inversions; there is a deficiency at one end of the inversion and a duplication at the other end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"},{"relation_name":"is_a","term_name":"intrachromosomal_duplication","termid":"SO:1000038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_deficiency_plus_duplication","synonyms":[{"name":"inversion derived deficiency plus duplication","type":"exact"}],"termid":"SO:0000465"}


id: PBO:0029541
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_and_spheroid_cells_(obsolete_FYPO:0002181)","termid":"PBO:0029541"}


id: GO:0050862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell receptor signaling pathway","termid":"GO:0050856"},{"relation_name":"is_a","term_name":"positive regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050857"},{"relation_name":"positively_regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of T cell receptor signaling pathway","synonyms":[{"name":"activation of T cell receptor signaling pathway","type":"narrow"},{"name":"positive regulation of T cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"positive regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of TCR signaling pathway","type":"exact"},{"name":"stimulation of T cell receptor signaling pathway","type":"narrow"},{"name":"up regulation of T cell receptor signaling pathway","type":"exact"},{"name":"up-regulation of T cell receptor signaling pathway","type":"exact"},{"name":"upregulation of T cell receptor signaling pathway","type":"exact"}],"termid":"GO:0050862"}


id: PR:O13917
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hpt1 gene.","definition_xrefs":["UniProtKB:O13917","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine-guanine phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.13c","synonyms":[{"name":"HGPRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HGPRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hpt1","type":"exact"}],"termid":"PR:O13917"}


id: RO:0002243
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A broad relationship between an exposure event or process and the course takes from the source to the target.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_exposure_to","termid":"RO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_transport_path","termid":"RO:0002243"}


id: MONDO:0021252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lung hilum neoplasm (obsolete MONDO:0021252)","termid":"MONDO:0021252","xrefs":{"Monarch":{"xref_id":"0021252"}}}


id: PBO:0078845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 1","termid":"PBO:0078845"}


id: PATO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A degree of pigmentation quality inhering in a bearer by virtue of the bearer's lacking substances produced by living organisms that have a color resulting from selective color absorption.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degree of pigmentation","termid":"PATO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unpigmented","synonyms":[{"name":"depigmented","type":"exact"}],"termid":"PATO:0002249"}


id: MONDO:0040871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of primary polydipsia caused by underlying psychiatric symptoms, including those caused by psychoses and rarely by affective disorders.","definition_xrefs":["Wikipedia:Primary_polydipsia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary polydipsia","termid":"MONDO:0040870"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychogenic polydipsia","secondary_identifiers":["MEDGEN:452478","UMLS:C0395005","SCTID:15945005"],"synonyms":[{"name":"psychogenic polydipsia","type":"exact"}],"termid":"MONDO:0040871","xrefs":{"Monarch":{"xref_id":"0040871"}}}


id: PBO:0035711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9K14_acetylation_during_vegetative_growth","termid":"PBO:0035711"}


id: PBO:0039782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 9","termid":"PBO:0039782"}


id: MONDO:0010379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monoamine oxidase-A deficiency is a very rare recessive X-linked biogenic amine metabolism disorder characterized clinically by mild intellectual deficit, impulsive aggressiveness, and sometimes violent behavior and presenting from childhood.","definition_xrefs":["Orphanet:3057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of neurotransmitter metabolism and transport","termid":"MONDO:0019219"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"Brunner syndrome","secondary_identifiers":["MEDGEN:208683","MESH:C563156","OMIM:300615","GARD:3531","SCTID:718210003","DOID:0060693","UMLS:C0796275"],"synonyms":[{"name":"BRNRS","type":"related"},{"name":"Brunner syndrome","type":"exact"},{"name":"Brunner syndrome, X-linked recessive","type":"exact"},{"name":"antisocial behavior, X-linked recessive","type":"exact"},{"name":"antisocial behavior, susceptibility to","type":"related"},{"name":"monoamine oxidase A deficiency","type":"exact"}],"termid":"MONDO:0010379","xrefs":{"Monarch":{"xref_id":"0010379"}}}


id: PBO:0059063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3B","termid":"PBO:0059063"}


id: MONDO:0003841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the heart usually originating in the epicardial or pericardial fatty tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of heart","termid":"MONDO:0021450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart lipoma","secondary_identifiers":["DOID:6285","MEDGEN:272436","UMLS:C1332849","NCIT:C6741"],"synonyms":[{"name":"Cardiac lipoma","type":"exact"},{"name":"heart lipoma","type":"exact"},{"name":"lipoma of heart","type":"exact"},{"name":"lipoma of the heart","type":"exact"}],"termid":"MONDO:0003841","xrefs":{"Monarch":{"xref_id":"0003841"}}}


id: PBO:0059499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"msh homeobox 2","termid":"PBO:0059499"}


id: PBO:0056528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 5 receptor","termid":"PBO:0056528"}


id: GO:1990226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone methyltransferase enzyme.","definition_xrefs":["GOC:BHF","PMID:19486527","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"histone methyltransferase binding","termid":"GO:1990226"}


id: FYPO:0000150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the morphology, i.e. the size, shape, or structure, of a colony growing on a solid surface is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"abnormal colony morphology","synonyms":[{"name":"colony shape: abnormal","type":"related"}],"termid":"FYPO:0000150"}


id: MONDO:0000815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A specific developmental disorder that is characterized by physical, behavioral and learning birth defects resulting from maternal ingestion of nicotine during pregnancy.","definition_xrefs":["PMID:20363831","DOID:0060606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal nicotine spectrum disorder","termid":"MONDO:0000815","xrefs":{"Monarch":{"xref_id":"0000815"}}}


id: MONDO:1012926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in white-tufted-ear marmoset due to a mutation in the APP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, APP-related, white-tufted-ear marmoset","secondary_identifiers":["OMIA:002538-9483"],"termid":"MONDO:1012926","xrefs":{"Monarch":{"xref_id":"1012926"}}}


id: PBO:0070413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A4","termid":"PBO:0070413"}


id: GO:0071536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a RING-like zinc finger domain interaction.","definition_xrefs":["GOC:amm","InterPro:IPR014857"],"gene_count":0,"genotype_count":0,"name":"obsolete RING-like zinc finger domain-mediated complex assembly (obsolete GO:0071536)","synonyms":[{"name":"RING-like domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071536"}


id: GO:0060982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of coronary arteries are generated and organized. Coronary arteries are blood vessels that transport blood to the heart muscle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"is_a","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary artery morphogenesis","termid":"GO:0060982"}


id: PBO:0043191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2","termid":"PBO:0043191"}


id: MONDO:0020608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--ahonen (obsolete MONDO:0020608)","secondary_identifiers":["OMIM:110350"],"synonyms":[{"name":"AN","type":"related"},{"name":"BLOOD GROUP--AHONEN","type":"related"}],"termid":"MONDO:0020608","xrefs":{"Monarch":{"xref_id":"0020608"}}}


id: PBO:0042704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 3","termid":"PBO:0042704"}


id: PBO:0005591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Chr2 (predicted)","termid":"PBO:0005591"}


id: GO:0150012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which the anatomical structures of a neuron projection are generated and organized into branches.","definition_xrefs":["GOC:bc","PMID:17114044","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of neuron projection arborization","termid":"GO:0150011"},{"relation_name":"positively_regulates","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron projection arborization","synonyms":[{"name":"positive regulation of neurite arborization","type":"exact"},{"name":"positive regulation of neurite branching","type":"exact"},{"name":"positive regulation of neuron projection branching","type":"exact"}],"termid":"GO:0150012"}


id: FYPO:0001747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of nickel ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nickel import","synonyms":[{"name":"abnormal cellular nickel import","type":"exact"},{"name":"abnormal nickel cation import","type":"exact"},{"name":"abnormal nickel import across plasma membrane","type":"exact"},{"name":"abnormal nickel import during mitotic cell cycle","type":"related"},{"name":"abnormal nickel import during vegetative growth","type":"exact"},{"name":"abnormal nickel import into cell","type":"exact"},{"name":"abnormal nickel ion import","type":"exact"}],"termid":"FYPO:0001747"}


id: GO:1902736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor-mediated virion attachment to host cell.","definition_xrefs":["PMID:18385238","GO_REF:0000058","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor-mediated virion attachment to host cell","termid":"GO:1902734"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor-mediated virion attachment to host cell","synonyms":[{"name":"activation of receptor-mediated virion attachment to host cell","type":"narrow"},{"name":"activation of virion attachment, binding of host cell surface receptor","type":"narrow"},{"name":"positive regulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"up regulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"up regulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"up-regulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"up-regulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"upregulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"upregulation of virion attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:1902736"}


id: MONDO:0003587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm arising from adipocytes, that occurs in children. The tumor maybe one of several histologic types including well-differentiated, dedifferentiated, myxoid/round cell, and pleomorphic liposarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric liposarcoma","secondary_identifiers":["NANDO:2200065","NCIT:C8091","UMLS:C0279984","MEDGEN:83580","DOID:5695"],"synonyms":[{"name":"childhood liposarcoma","type":"exact"},{"name":"liposarcoma","type":"broad"},{"name":"pediatric liposarcoma","type":"exact"}],"termid":"MONDO:0003587","xrefs":{"Monarch":{"xref_id":"0003587"}}}


id: PBO:0057496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 614","termid":"PBO:0057496"}


id: PBO:0004155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Chr1 (predicted)","termid":"PBO:0004155"}


id: GO:0009780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An NADPH regeneration process that contributes to the light reactions of photosynthesis. The light reactions of photosynthesis use energy from photons to generate high-energy electrons. These electrons are used directly to reduce NADP+ to NADPH. NADPH is a relatively stable molecule and can pass on its hydrogen atom to other molecules in chemical reactions.","definition_xrefs":["GOC:jid","ISBN:0716746840","ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADPH regeneration","termid":"GO:0006740"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"photosynthetic NADP+ reduction","termid":"GO:0009780"}


id: PBO:0018181
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Encephalopathy","termid":"PBO:0018181"}


id: MONDO:0003818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature teratoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood teratoma of the ovary","termid":"MONDO:0003819"},{"relation_name":"is_a","term_name":"mature ovarian teratoma","termid":"MONDO:0003820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood mature teratoma of the ovary","secondary_identifiers":["MEDGEN:232354","DOID:6229","UMLS:C1332991","NCIT:C6548"],"synonyms":[{"name":"childhood mature ovarian teratoma","type":"exact"},{"name":"childhood mature teratoma of ovary","type":"exact"},{"name":"childhood ovarian mature teratoma","type":"exact"},{"name":"mature ovarian teratoma of childhood","type":"exact"},{"name":"paediatric mature ovarian teratoma","type":"exact"},{"name":"paediatric mature teratoma of ovary","type":"exact"},{"name":"paediatric mature teratoma of the ovary","type":"exact"},{"name":"paediatric ovarian mature teratoma","type":"exact"},{"name":"pediatric mature ovarian teratoma","type":"exact"},{"name":"pediatric mature teratoma of ovary","type":"exact"},{"name":"pediatric mature teratoma of the ovary","type":"exact"},{"name":"pediatric ovarian mature teratoma","type":"exact"}],"termid":"MONDO:0003818","xrefs":{"Monarch":{"xref_id":"0003818"}}}


id: GO:0075226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological, developmental and morphological changes that occur in an encysted zoospore, that germinates by developing a germ tube that may penetrate the host directly or indirectly through an appressorium. An encysted zoospore is a zoospore which has shed its flagellum and whose membrane has fused to form a walled cyst. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"encysted zoospore germination","synonyms":[{"name":"encysted zoospore germination on or near host","type":"exact"}],"termid":"GO:0075226"}


id: PBO:0063478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 6","termid":"PBO:0063478"}


id: GO:0061168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hair follicle placode formation","termid":"GO:0061168"}


id: PATO:0000035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000035 carbohydrate concentration (obsolete PATO:0000035)","termid":"PATO:0000035"}


id: PBO:0090708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2458 conserved fungal protein","termid":"PBO:0090708"}


id: PBO:0048050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formiminotransferase cyclodeaminase N-terminal like","termid":"PBO:0048050"}


id: MONDO:0006472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tracheal carcinoma (obsolete MONDO:0006472)","termid":"MONDO:0006472","xrefs":{"Monarch":{"xref_id":"0006472"}}}


id: MONDO:0001156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an enduring pattern of unstable self-image and mood together with volatile interpersonal relationships, self-damaging impulsivity, recurrent suicidal threats or gestures and/or self-mutilating behavior.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"personality disorder","termid":"MONDO:0002028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borderline personality disorder","secondary_identifiers":["MEDGEN:14197","HP:0012076","MESH:D001883","DOID:10930","ICD9:301.83","NCIT:C92633","UMLS:C0006012","icd11.foundation:189289487","SCTID:20010003"],"synonyms":[{"name":"BPD","type":"exact"},{"name":"borderline personality disorder","type":"exact"},{"name":"borderline personality disorder (disease)","type":"exact"}],"termid":"MONDO:0001156","xrefs":{"Monarch":{"xref_id":"0001156"}}}


id: MONDO:0100501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare anomaly (1 in 14,000 to 42,000 pregnancies; 1 in 7500 fetuses from 10 to 14 weeks of gestation) characterized by a complex anomaly of the anterior abdominal wall, severe kyphoscoliosis, rudimentary umbilical cord, and anatomical defects of the pelvis and lower limbs.","definition_xrefs":["PMID:33115503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal wall malformation","termid":"MONDO:0100298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"body-stalk anomaly","synonyms":[{"name":"BSA","type":"exact"},{"name":"LBWC","type":"narrow"},{"name":"body stalk anomaly","type":"exact"},{"name":"body stalk complex","type":"exact"},{"name":"limb body wall complex","type":"narrow"}],"termid":"MONDO:0100501","xrefs":{"Monarch":{"xref_id":"0100501"}}}


id: GO:0035649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that functions in transcription termination of RNA polymerase II transcribed non-coding RNAs. This complex interacts with the carboxy-terminal domain (CTD) of PolII and the terminator sequences in the nascent RNA transcript. In yeast this complex consists of Nrd1p, Nab3p, and Sen1p.","definition_xrefs":["PMID:16427013","PMID:10655211","PMID:21084293","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Nrd1 complex","termid":"GO:0035649"}


id: GO:0034849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-naphthoyl-CoA + OH- = 2-naphthoate + CoASH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-naphthoate CoA-transferase activity (obsolete GO:0034849)","termid":"GO:0034849"}


id: PBO:0043505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 3C","termid":"PBO:0043505"}


id: PBO:0059211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rRNA methyltransferase 3","termid":"PBO:0059211"}


id: MONDO:0010548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked cerebellar ataxia","termid":"MONDO:0016612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia, X-linked 2","secondary_identifiers":["DOID:0111830","MESH:C537314","OMIM:302600","UMLS:C1844885","MEDGEN:375535","GARD:9978"],"synonyms":[{"name":"Scax2","type":"related"},{"name":"cerebellar ataxia with extrapyramidal involvement early-onset","type":"related"},{"name":"cerebellar ataxia with extrapyramidal involvement, early-onset","type":"related"},{"name":"spinocerebellar ataxia X-linked type 2","type":"related"},{"name":"spinocerebellar ataxia, X-linked 2","type":"exact"},{"name":"spinocerebellar ataxia, X-linked type 2","type":"exact"}],"termid":"MONDO:0010548","xrefs":{"Monarch":{"xref_id":"0010548"}}}


id: PBO:0047309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas ligand","termid":"PBO:0047309"}


id: GO:0004462
data:
  {"annotated_genes":["SJAG_04726"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68074],"is_not":false,"summary":null,"term":"GO:0004462"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal.","definition_xrefs":["RHEA:19069","EC:4.4.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactoylglutathione lyase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R02530","MetaCyc:GLYOXI-RXN","Reactome:R-HSA-5694071"],"synonyms":[{"name":"(R)-S-lactoylglutathione methylglyoxal-lyase (isomerizing) activity","type":"related"},{"name":"(R)-S-lactoylglutathione methylglyoxal-lyase (isomerizing; glutathione-forming)","type":"related"},{"name":"aldoketomutase activity","type":"related"},{"name":"glyoxalase I activity","type":"related"},{"name":"glyoxylase I","type":"related"},{"name":"ketone-aldehyde mutase activity","type":"related"},{"name":"methylglyoxalase activity","type":"related"}],"termid":"GO:0004462","terms_by_termid":{"GO:0004462":null}}


id: GO:0030067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete respiratory chain cytochrome b6 (obsolete GO:0030067)","synonyms":[{"name":"respiratory chain cytochrome b6","type":"exact"}],"termid":"GO:0030067"}


id: GO:0015371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: galactose(out) + Na+(out) = glucose(in) + Na+(in).","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"galactose:sodium symporter activity","termid":"GO:0015371"}


id: GO:0070274
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is required for efficient splicing, and prevents leakage of unspliced pre-mRNAs from the nucleus (named for pre-mRNA REtention and Splicing). In Saccharomyces, the complex consists of Ist3p, Bud13p, and Pml1p.","definition_xrefs":["PMID:15565172","PMID:18809678","PMID:19010333","PMID:19033360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"RES complex","synonyms":[{"name":"pre-mRNA retention and splicing complex","type":"exact"}],"termid":"GO:0070274"}


id: PBO:0012053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein (predicted)","termid":"PBO:0012053"}


id: PBO:0090056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erp2/3/4","termid":"PBO:0090056"}


id: PBO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R52","termid":"PBO:0000298"}


id: GO:0047992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: erythro-5-hydroxy-L-lysine + GTP = 5-phosphonooxy-L-lysine + GDP + 2 H+.","definition_xrefs":["EC:2.7.1.81","RHEA:19049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxylysine kinase activity","secondary_identifiers":["Reactome:R-HSA-6788611","KEGG_REACTION:R03378","MetaCyc:HYDROXYLYSINE-KINASE-RXN"],"synonyms":[{"name":"GTP:5-hydroxy-L-lysine O-phosphotransferase activity","type":"related"},{"name":"guanosine triphosphate:5-hydroxy-L-lysine O-phosphotransferase activity","type":"related"},{"name":"hydroxylysine kinase (phosphorylating)","type":"related"}],"termid":"GO:0047992"}


id: GO:0140029
data:
  {"annotated_genes":["SJAG_01697","SJAG_03357","SJAG_03864","SJAG_01925","SJAG_01772","SJAG_03005","SJAG_02587","SJAG_03499","SJAG_02166","SJAG_04960","SJAG_02320","SJAG_00280","SJAG_03938","SJAG_04966","SJAG_04044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92096,60168,79883,69530,79579,74744,117957,90341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"},{"annotations":[65870,101675,88384,60170,99311,117470,90511,113900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The cellular processes that contribute to exocytosis.","definition_xrefs":["Wikipedia:Exocytosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_03005":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04960":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"exocytic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140029","terms_by_termid":{"GO:0006904":null,"GO:0090522":null}}


id: MONDO:0013011
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85110],"is_not":false,"summary":null,"term":"MONDO:0013011"}]},"cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the ACTC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110110","MESH:C567561","OMIM:612794","UMLS:C2748552","MEDGEN:412580"],"synonyms":[{"name":"ACTC1 atrial heart septal defect","type":"exact"},{"name":"ASD5","type":"exact"},{"name":"atrial heart septal defect caused by mutation in ACTC1","type":"exact"},{"name":"atrial heart septal defect type 5","type":"exact"},{"name":"atrial septal defect 5","type":"exact"},{"name":"atrial septal defect type 5","type":"exact"}],"termid":"MONDO:0013011","terms_by_termid":{"MONDO:0013011":null},"xrefs":{"Monarch":{"xref_id":"0013011"}}}


id: PBO:0081362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 197","termid":"PBO:0081362"}


id: MONDO:1010208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myofibrillar myopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myofibrillar myopathy, non-human animal","secondary_identifiers":["OMIA:002330"],"termid":"MONDO:1010208","xrefs":{"Monarch":{"xref_id":"1010208"}}}


id: GO:0090235
data:
  {"annotated_genes":["SJAG_03048","SJAG_03126","SJAG_00082","SJAG_05290","SJAG_04140","SJAG_04280","SJAG_01805","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[111707,115752,104941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[116420,89761,110951,102133,93569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of metaphase plate congression, the alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the spindle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"metaphase chromosome alignment","termid":"GO:0051310"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metaphase plate congression","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromosome congression","type":"exact"}],"termid":"GO:0090235","terms_by_termid":{"GO:0140429":null,"GO:1902424":null,"GO:1902425":null}}


id: GO:0007594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of the puparia of Diptera to their substrate; normally effected by a 'glue' secreted by the larval salivary gland and expectorated at the time of pupariation.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism adhesion to substrate","termid":"GO:0022609"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"puparial adhesion","synonyms":[{"name":"puparial glue","type":"related"}],"termid":"GO:0007594"}


id: MONDO:0030860
data:
  {"annotated_genes":["SJAG_01537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85470],"is_not":false,"summary":null,"term":"MONDO:0030860"}]},"cv_name":"mondo","definition":"Any neuronopathy, distal hereditary motor in which the cause of the disease is a mutation in the BSCL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, type 5","termid":"MONDO:0100350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 5C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18268","MEDGEN:1760720","UMLS:C5436838","DOID:0081401","OMIM:619112"],"synonyms":[{"name":"DHMN5C","type":"exact"},{"name":"HMN5C","type":"exact"},{"name":"neuropathy, distal hereditary motor, type VC","type":"exact"},{"name":"spinal muscular atrophy, distal, type 5C","type":"exact"}],"termid":"MONDO:0030860","terms_by_termid":{"MONDO:0030860":null},"xrefs":{"Monarch":{"xref_id":"0030860"}}}


id: GO:0043536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the migration of the endothelial cells of blood vessels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell migration","termid":"GO:0010595"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"},{"relation_name":"positively_regulates","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel endothelial cell migration","synonyms":[{"name":"activation of blood vessel endothelial cell migration","type":"narrow"},{"name":"stimulation of blood vessel endothelial cell migration","type":"narrow"},{"name":"up regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"up-regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"upregulation of blood vessel endothelial cell migration","type":"exact"}],"termid":"GO:0043536"}


id: GO:0015657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: branched-chain amino acid(out) + cation(out) = branched-chain amino acid(in) + cation(in).","definition_xrefs":["TC:2.A.26.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"branched-chain amino acid:sodium symporter activity","termid":"GO:0015657"}


id: PATO:0002448
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's bing aligned or positioned towards another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriented towards","termid":"PATO:0002448"}


id: GO:0009335
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the formation of holo-[acyl-carrier protein] from CoA and apo-[acyl-carrier protein].","definition_xrefs":["EC:2.7.8.7"],"gene_count":0,"genotype_count":0,"name":"obsolete holo-[acyl-carrier protein] synthase complex (obsolete GO:0009335)","synonyms":[{"name":"holo-ACP synthase complex","type":"exact"},{"name":"holo-[acyl-carrier protein] synthase complex","type":"exact"}],"termid":"GO:0009335"}


id: PBO:0087700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RecQ (Sgs1p) - Topo III (Top3p) complex; stimulates superhelical relaxing, DNA catenation/decatenation and ssDNA binding activities of Top3p; involved in response to DNA damage; functions in S phase-mediated cohesion establishment via a pathway involving the Ctf18-RFC complex and Mrc1p; stimulates Top3p DNA catenation/decatenation activity; null mutants display increased rates of recombination and delayed S phase","termid":"PBO:0087700"}


id: GO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the biosynthesis of retinoic acid, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"retinoic acid biosynthetic process","synonyms":[{"name":"retinoic acid anabolic process","type":"exact"},{"name":"retinoic acid biosynthesis","type":"exact"}],"termid":"GO:0002138"}


id: PBO:0066909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 210","termid":"PBO:0066909"}


id: GO:0047532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopiperazine + H2O = glycylglycine.","definition_xrefs":["EC:3.5.2.13","RHEA:21808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2,5-dioxopiperazine hydrolase activity","secondary_identifiers":["KEGG_REACTION:R03810","MetaCyc:25-DIOXOPIPERAZINE-HYDROLASE-RXN"],"synonyms":[{"name":"2,5-dioxopiperazine amidohydrolase activity","type":"related"},{"name":"cyclo(Gly-Gly) hydrolase activity","type":"related"},{"name":"cyclo(glycylglycine) hydrolase activity","type":"related"}],"termid":"GO:0047532"}


id: MONDO:0000428
data:
  {"annotated_genes":["SJAG_01926"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027048"}]},"cv_name":"mondo","definition":"Y-linked form of disease.","definition_xrefs":["MONDO:patterns/y_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01926":null},"genotype_count":0,"is_obsolete":false,"name":"Y-linked disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1563751","MEDGEN:289655","MESH:D050174","DOID:0050738"],"synonyms":[{"name":"Y linked genetic diseases","type":"related"},{"name":"Y-linked disease or disorder","type":"exact"},{"name":"Y-linked genetic disease","type":"related"},{"name":"Y-linked genetic diseases","type":"related"},{"name":"disease or disorder, Y-linked","type":"exact"},{"name":"disease, Y-linked","type":"exact"},{"name":"disease, Y-linked genetic","type":"related"},{"name":"diseases, Y-linked genetic","type":"related"},{"name":"genetic disease, Y-linked","type":"related"},{"name":"genetic diseases, Y chromosome linked","type":"related"},{"name":"genetic diseases, Y linked","type":"related"},{"name":"genetic diseases, Y-chromosome linked","type":"related"}],"termid":"MONDO:0000428","terms_by_termid":{"MONDO:0027048":null},"xrefs":{"Monarch":{"xref_id":"0000428"}}}


id: PBO:0044619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoidin, CUB and LCCL domain containing 2","termid":"PBO:0044619"}


id: GO:2001285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of BMP secretion.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of BMP secretion","termid":"GO:2001284"},{"relation_name":"negatively_regulates","term_name":"BMP secretion","termid":"GO:0038055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of BMP secretion","synonyms":[{"name":"negative regulation of BMP protein secretion","type":"exact"},{"name":"negative regulation of bone morphogenetic protein secretion","type":"exact"}],"termid":"GO:2001285"}


