# terms

id: PR:Q9Y825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcf3 gene.","definition_xrefs":["UniProtKB:Q9Y825","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C25H1.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.06","synonyms":[{"name":"Spom972h-pcf3","type":"exact"}],"termid":"PR:Q9Y825"}


id: PBO:0054929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2343","termid":"PBO:0054929"}


id: PBO:0056191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA3 divergent transcript","termid":"PBO:0056191"}


id: PBO:0053571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 589","termid":"PBO:0053571"}


id: GO:0045003
data:
  {"annotated_genes":["SJAG_00935","SJAG_02465","SJAG_02267","SJAG_01410","SJAG_02708","SJAG_02460","SJAG_01708","SJAG_03221","SJAG_02690","SJAG_02079","SJAG_04530","SJAG_00757","SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70810,77740,107898,117187],"is_not":false,"summary":null,"term":"GO:0045003"},{"annotations":[64764,74856,72050,75529,65409],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000730"},{"annotations":[78326],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000707"},{"annotations":[107416,110053],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[100403],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"SDSA is a major mechanism of double-strand break repair in mitosis which allows for the error-free repair of a double-strand break without the exchange of adjacent sequences. The broken DNA searches for and base pairs with a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template. Newly synthesized DNA is then displaced from the template and anneal with its complement on the other side of the double-strand break.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_00935":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0006281"],"is_obsolete":false,"name":"double-strand break repair via synthesis-dependent strand annealing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693554"],"synonyms":[{"name":"SDSA","type":"broad"},{"name":"mitotic gene conversion","type":"related"}],"termid":"GO:0045003","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null,"GO:0045003":null,"GO:1902346":null}}


id: MONDO:0002755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized, clonal (malignant) plasma cell infiltrate in the bone, without peripheral blood involvement. The most commonly affected bones are the vertebrae, ribs, skull, pelvis and femur. X-rays examination reveals a solitary lytic lesion.","definition_xrefs":["NCIT:C7812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmacytoma","termid":"MONDO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"solitary osseous plasmacytoma","secondary_identifiers":["DOID:3722","SCTID:426336007","ONCOTREE:SPB","ICD9:238.6","MEDGEN:75777","UMLS:C0272256"],"synonyms":[{"name":"SPB","type":"related"},{"name":"isolated osseous plasmacytoma","type":"exact"},{"name":"isolated plasmacytoma of bone","type":"exact"},{"name":"solitary plasmacytoma of bone","type":"exact"}],"termid":"MONDO:0002755","xrefs":{"Monarch":{"xref_id":"0002755"}}}


id: PR:Q09850
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eng2 gene.","definition_xrefs":["UniProtKB:Q09850","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-1,3(4)-beta-glucanase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.10c","synonyms":[{"name":"Spom972h-eng2","type":"exact"},{"name":"endo-1,3-beta-glucanase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"endo-1,4-beta-glucanase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"laminarinase-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09850"}


id: PBO:0080172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 7","termid":"PBO:0080172"}


id: PBO:0026759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_polyubiquitination_during_cellular_response_to_UV","termid":"PBO:0026759"}


id: PBO:0080676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHAMM pseudogene 3","termid":"PBO:0080676"}


id: PBO:0026922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4_acetylation","termid":"PBO:0026922"}


id: MONDO:1010563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acromegaly that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromegaly, non-human animal","termid":"MONDO:1010049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromegaly, domestic cat","secondary_identifiers":["OMIA:000008-9685"],"termid":"MONDO:1010563","xrefs":{"Monarch":{"xref_id":"1010563"}}}


id: PBO:0060371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myozenin 1","termid":"PBO:0060371"}


id: SO:0001287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5,2'-O-dimethylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_two_prime_O_dimethylcytidine","secondary_identifiers":["RNAMOD:026"],"synonyms":[{"name":"5,2'-O-dimethylcytidine","type":"exact"},{"name":"five two prime O dimethylcytidine","type":"exact"},{"name":"m5Cm","type":"exact"}],"termid":"SO:0001287"}


id: MONDO:0019821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm or dilatation of ascending aorta","secondary_identifiers":["Orphanet:95484"],"termid":"MONDO:0019821","xrefs":{"Monarch":{"xref_id":"0019821"}}}


id: MONDO:0012558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphyseal dysplasia, Baumann type","secondary_identifiers":["OMIM:610797","UMLS:C1835830","MESH:C563664","MEDGEN:322764"],"synonyms":[{"name":"epiphyseal dysplasia, Baumann type","type":"exact"}],"termid":"MONDO:0012558","xrefs":{"Monarch":{"xref_id":"0012558"}}}


id: MONDO:0003942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophobe renal cell carcinoma","termid":"MONDO:0017885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"eosinophilic variant of chromophobe renal cell carcinoma","secondary_identifiers":["UMLS:C1333405","DOID:6606","MEDGEN:232458","NCIT:C27889"],"synonyms":[{"name":"eosinophilic variant of chromophobe renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003942","xrefs":{"Monarch":{"xref_id":"0003942"}}}


id: PBO:0072783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold attachment factor B","termid":"PBO:0072783"}


id: PBO:0041105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSN antisense RNA 1","termid":"PBO:0041105"}


id: PBO:0025416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, possibly truncated by rearrangement and LTR","termid":"PBO:0025416"}


id: MONDO:0014969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pentose phosphate metabolism","termid":"MONDO:0019231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"isolated sedoheptulokinase deficiency","secondary_identifiers":["SCTID:124309005","UMLS:C1291373","GARD:18652","ICD9:277.6","MEDGEN:713680","OMIM:617213","Orphanet:440713"],"synonyms":[{"name":"SHPKD","type":"exact"},{"name":"isolated SHPK deficiency","type":"exact"},{"name":"sedoheptulokinase deficiency","type":"exact"}],"termid":"MONDO:0014969","xrefs":{"Monarch":{"xref_id":"0014969"}}}


id: FYPO:0004740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position, composition or morphology of the of the actomyosin contractile ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal actomyosin contractile ring","synonyms":[{"name":"normal actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring during vegetative growth","type":"exact"}],"termid":"FYPO:0004740"}


id: FYPO:0008317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase, when cells the population are subject to sulfur starvation.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability in stationary phase","termid":"FYPO:0000245"},{"relation_name":"is_a","term_name":"loss of viability upon sulfur starvation","termid":"FYPO:0007088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability in stationary phase upon sulfur starvation","termid":"FYPO:0008317"}


id: PBO:0053938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1238","termid":"PBO:0053938"}


id: FYPO:0000551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pseudohyphal growth does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pseudohyphal growth","termid":"FYPO:0000550"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"pseudohyphal growth abolished","secondary_identifiers":["FYPO:0000436"],"synonyms":[{"name":"abolished filamentous growth","type":"broad"},{"name":"abolished pseudohyphal growth","type":"exact"},{"name":"absent filamentous growth","type":"broad"},{"name":"absent pseudohyphal growth","type":"exact"},{"name":"filamentous growth abolished","type":"broad"},{"name":"filamentous growth: absent","type":"broad"},{"name":"pseudohyphal growth: absent","type":"related"}],"termid":"FYPO:0000551"}


id: PBO:0069003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 247, pseudogene","termid":"PBO:0069003"}


id: PR:O42866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbonyl reductase family member 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01330","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.02","secondary_identifiers":["UniProtKB:O42866"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CBR4","type":"exact"}],"termid":"PR:O42866"}


id: PBO:0058696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6824","termid":"PBO:0058696"}


id: GO:0005192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete urinary protein (obsolete GO:0005192)","synonyms":[{"name":"urinary protein","type":"exact"}],"termid":"GO:0005192"}


id: GO:0048555
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of the generative cell, a cell contained within the pollen grain that will divide to produce two haploid sperm cells.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"generative cell nucleus","synonyms":[{"name":"male germ cell nucleus","type":"broad"},{"name":"sperm cell nucleus","type":"broad"}],"termid":"GO:0048555"}


id: PBO:0076891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 45","termid":"PBO:0076891"}


id: GO:0102686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose(2-) + trans-zeatin = H+ + 9-(alpha-D-glucosyl)-trans-zeatin + UDP(3-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:trans-zeatin 9-N-glucosyltransferase (obsolete GO:0102686)","termid":"GO:0102686"}


id: GO:0006435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling threonine to threonyl-tRNA, catalyzed by threonyl-tRNA synthetase. The threonyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a threonine-accetping tRNA.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"threonyl-tRNA aminoacylation","termid":"GO:0006435"}


id: GO:0047068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methenyl-5,6,7,8-tetrahydromethanopterin + H(2) = 5,10-methylenetetrahydromethanopterin + H+.","definition_xrefs":["RHEA:20017","EC:1.12.98.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","termid":"GO:0046995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"N5,N10-methenyltetrahydromethanopterin hydrogenase activity","secondary_identifiers":["MetaCyc:H2-METHYLENE-THMPT-DEHYDRO-RXN","KEGG_REACTION:R04455","GO:0016947"],"synonyms":[{"name":"5,10-methenyltetrahydromethanopterin hydrogenase activity","type":"related"},{"name":"H(2)-dependent methylene-H(4)MPT dehydrogenase activity","type":"related"},{"name":"H(2)-forming N(5),N(10)-methylenetetrahydromethanopterin dehydrogenase activity","type":"related"},{"name":"H2-dependent methylene-H4MPT dehydrogenase activity","type":"related"},{"name":"H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase activity","type":"related"},{"name":"N(5),N(10)-methenyltetrahydromethanopterin hydrogenase activity","type":"related"},{"name":"N5,N10-methylenetetrahydromethanopterin dehydrogenase activity","type":"exact"},{"name":"hydrogen:5,10-methenyltetrahydromethanopterin oxidoreductase activity","type":"related"},{"name":"hydrogen:N(5),N(10)-methenyltetrahydromethanopterin oxidoreductase activity","type":"related"},{"name":"hydrogen:N5,N10-methenyltetrahydromethanopterin oxidoreductase activity","type":"related"},{"name":"nonmetal hydrogenase activity","type":"related"}],"termid":"GO:0047068"}


id: GO:1904355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomere capping.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:23959892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomere capping","termid":"GO:1904353"},{"relation_name":"positively_regulates","term_name":"telomere capping","termid":"GO:0016233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"positive regulation of telomere capping","synonyms":[{"name":"activation of telomere capping","type":"narrow"},{"name":"activation of telomere end protection","type":"narrow"},{"name":"positive regulation of telomere end protection","type":"exact"},{"name":"up regulation of telomere capping","type":"exact"},{"name":"up regulation of telomere end protection","type":"exact"},{"name":"up-regulation of telomere capping","type":"exact"},{"name":"up-regulation of telomere end protection","type":"exact"},{"name":"upregulation of telomere capping","type":"exact"},{"name":"upregulation of telomere end protection","type":"exact"}],"termid":"GO:1904355"}


id: PBO:0041131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 10 pseudogene 1","termid":"PBO:0041131"}


id: GO:0006949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane. Syncytia are normally derived from single cells that fuse or fail to complete cell division.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"syncytium formation","termid":"GO:0006949"}


id: GO:0018669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoate + H+ + NADH + O2 = 2,5-dihydroxybenzoate + H2O + NAD+.","definition_xrefs":["RHEA:22692","EC:1.14.13.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-hydroxybenzoate 6-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0402","KEGG_REACTION:R02589","MetaCyc:3-HYDROXYBENZOATE-6-MONOOXYGENASE-RXN"],"synonyms":[{"name":"3-hydroxybenzoate 6-hydroxylase activity","type":"exact"},{"name":"3-hydroxybenzoate,NADH:oxygen oxidoreductase (6-hydroxylating)","type":"related"},{"name":"3-hydroxybenzoic acid-6-hydroxylase activity","type":"related"},{"name":"m-hydroxybenzoate 6-hydroxylase activity","type":"related"}],"termid":"GO:0018669"}


id: MOD:00678
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to an hydroxylated L-proline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated proline","synonyms":[{"name":"HyPro","type":"exact"}],"termid":"MOD:00678"}


id: PBO:0067690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal N2","termid":"PBO:0067690"}


id: MONDO:1010415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, rabbit","secondary_identifiers":["OMIA:000344-9986"],"termid":"MONDO:1010415","xrefs":{"Monarch":{"xref_id":"1010415"}}}


id: GO:0015800
data:
  {"annotated_genes":["SJAG_03256","SJAG_00522","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[103585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901481"},{"annotations":[103586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[96315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"}]},"cv_name":"biological_process","definition":"The directed movement of acidic amino acids, amino acids with a pH below 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"acidic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015800","terms_by_termid":{"GO:0015813":null,"GO:0090515":null,"GO:0110141":null,"GO:1901481":null}}


id: PATO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being small or narrow in circumference or width in proportion to length or height.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/slender"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slender","synonyms":[{"name":"gracile","type":"related"}],"termid":"PATO:0002212"}


id: PBO:0047562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF14 antisense RNA 1","termid":"PBO:0047562"}


id: GO:0061611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways in which mannose, the aldohexose manno-hexose, is converted to fructose-6-phosphate.","definition_xrefs":["GOC:dph","ISBN:0201090910","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"mannose catabolic process","termid":"GO:0019309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mannose to fructose-6-phosphate catabolic process","synonyms":[{"name":"mannose metabolism to fructose-6-phosphate","type":"exact"}],"termid":"GO:0061611"}


id: PBO:0017894
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dis1 Suppressing protein Kinase","termid":"PBO:0017894"}


id: PBO:0003205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Obg-like ATPase (predicted)","termid":"PBO:0003205"}


id: PR:Q9UTL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein 710 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01932","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor IIIA (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.09c","secondary_identifiers":["UniProtKB:Q9UTL5"],"synonyms":[{"name":"Spom972h-ZNF710","type":"exact"},{"name":"TFIIIA (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTL5"}


id: PBO:0074949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 112","termid":"PBO:0074949"}


id: PBO:0079606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2F pseudogene 3","termid":"PBO:0079606"}


id: PBO:0089916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Bmt5","termid":"PBO:0089916"}


id: PBO:0089687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 1","termid":"PBO:0089687"}


id: PBO:0056276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2A member 1","termid":"PBO:0056276"}


id: MONDO:0009527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder caused by mutation in the LMF1 gene resulting in combined lipase deficiency with concomitant hypertriglyceridemia and associated disorders.","definition_xrefs":["NCIT:C126558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"familial chylomicronemia syndrome","termid":"MONDO:0018637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"lipase deficiency, combined","secondary_identifiers":["DOID:0111422","MESH:C535904","OMIM:246650","UMLS:C1855498","GARD:10244","Orphanet:535453","MEDGEN:340886"],"synonyms":[{"name":"LPL and HL deficiency","type":"related"},{"name":"LPL and HTGL deficiency","type":"related"},{"name":"combined lipase deficiency","type":"exact"},{"name":"familial lipase maturation factor 1 deficiency","type":"exact"},{"name":"lipase deficiency combined","type":"related"},{"name":"lipase deficiency, combined","type":"exact"},{"name":"lipoprotein lipase deficiency with hepatic triglyceride lipase deficiency","type":"related"}],"termid":"MONDO:0009527","xrefs":{"Monarch":{"xref_id":"0009527"}}}


id: PR:P79010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox4 gene.","definition_xrefs":["UniProtKB:P79010","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.02","synonyms":[{"name":"Spom972h-cox4","type":"exact"},{"name":"cytochrome c oxidase polypeptide IV (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79010"}


id: FYPO:0006420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which sites at which the protein Rad51 accumulates remain present for a normal (i.e. indistinguishable from wild type) amount of time during the meiotic cell cycle. Normally, Rad51 foci form during prophase I but disappear before metaphase I.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of Rad51 focus presence during meiotic cell cycle","termid":"FYPO:0006420"}


id: PBO:0080115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UVRAG divergent transcript","termid":"PBO:0080115"}


id: GO:1903209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of oxidative stress-induced cell death.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:20969476","GOC:PARL","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oxidative stress-induced cell death (obsolete GO:1903209)","synonyms":[{"name":"activation of cell death in response to oxidative stress","type":"narrow"},{"name":"enhancement of oxidative stress-induced cell death","type":"narrow"},{"name":"positive regulation of cell death in response to oxidative stress","type":"exact"},{"name":"up regulation of cell death in response to oxidative stress","type":"exact"},{"name":"up-regulation of cell death in response to oxidative stress","type":"exact"},{"name":"upregulation of cell death in response to oxidative stress","type":"exact"}],"termid":"GO:1903209"}


id: FYPO:0004247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the fungal-type vacuole is normal (i.e. indistinguishable from wild type)..","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal vacuolar morphology during vegetative growth","synonyms":[{"name":"normal vacuolar morphology during mitotic cell cycle","type":"related"},{"name":"normal vacuole morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0004247"}


id: GO:0010621
data:
  {"annotated_genes":["SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100754],"is_not":false,"summary":null,"term":"GO:0010621"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-dependent transcription using a mechanism that involves the localization of a transcription factor.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006351","GO:0010467","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription by transcription factor localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of transcription by transcription factor localisation","type":"exact"}],"termid":"GO:0010621","terms_by_termid":{"GO:0010621":null}}


id: PBO:0090426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase E","termid":"PBO:0090426"}


id: GO:1900753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a doxorubicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:12057006","PMID:19651502","PMID:9651400","PMID:15090538","GOC:TermGenie","PMID:19063901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"doxorubicin transport","synonyms":[{"name":"(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"exact"},{"name":"(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"related"},{"name":"(8S-cis)-10-((3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedione transport","type":"related"},{"name":"14-hydroxydaunomycin transport","type":"related"},{"name":"14-hydroxydaunorubicine transport","type":"related"},{"name":"Adriamycin transport","type":"related"},{"name":"doxorubicine transport","type":"related"},{"name":"doxorubicinum transport","type":"related"}],"termid":"GO:1900753"}


id: GO:0003368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix that contributes to the directed movement of a mesendodermal cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion involved in ameboidal cell migration","termid":"GO:0003366"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-matrix adhesion involved in mesendodermal cell migration","termid":"GO:0003368"}


id: PBO:0043309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 2","termid":"PBO:0043309"}


id: GO:0002901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a B cell that is mature, having left the bone marrow.","definition_xrefs":["GOC:mtg_apoptosis","ISBN:0781735149","CL:0000785","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell apoptotic process","termid":"GO:0001783"},{"relation_name":"part_of","term_name":"B cell homeostasis","termid":"GO:0001782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature B cell apoptotic process","synonyms":[{"name":"apoptosis of mature B cells","type":"exact"},{"name":"apoptosis of mature B lymphocytes","type":"exact"},{"name":"apoptosis of mature B-cells","type":"exact"},{"name":"apoptosis of mature B-lymphocytes","type":"exact"},{"name":"mature B cell apoptosis","type":"narrow"},{"name":"mature B cell programmed cell death by apoptosis","type":"exact"},{"name":"mature B lymphocyte apoptosis","type":"exact"},{"name":"mature B lymphocyte programmed cell death by apoptosis","type":"exact"},{"name":"mature B-cell apoptosis","type":"exact"},{"name":"mature B-cell programmed cell death by apoptosis","type":"exact"},{"name":"mature B-lymphocyte apoptosis","type":"exact"},{"name":"mature B-lymphocyte programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of mature B cells by apoptosis","type":"exact"},{"name":"programmed cell death of mature B lymphocytes by apoptosis","type":"exact"},{"name":"programmed cell death of mature B-cells by apoptosis","type":"exact"},{"name":"programmed cell death of mature B-lymphocytes by apoptosis","type":"exact"},{"name":"programmed cell death, mature B cells","type":"exact"},{"name":"programmed cell death, mature B lymphocytes","type":"exact"},{"name":"programmed cell death, mature B-cells","type":"exact"},{"name":"programmed cell death, mature B-lymphocytes","type":"exact"}],"termid":"GO:0002901"}


id: GO:0046878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of saliva.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of saliva secretion","termid":"GO:0046877"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"positively_regulates","term_name":"saliva secretion","termid":"GO:0046541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of saliva secretion","synonyms":[{"name":"activation of saliva secretion","type":"narrow"},{"name":"stimulation of saliva secretion","type":"narrow"},{"name":"up regulation of saliva secretion","type":"exact"},{"name":"up-regulation of saliva secretion","type":"exact"},{"name":"upregulation of saliva secretion","type":"exact"}],"termid":"GO:0046878"}


id: PBO:0088130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein kinase; negatively regulates membrane fusion; associates with vacuolar membrane through palmitoylation of one or more cysteines in consensus sequence; vacuolar membrane association is essential to its kinase activity; mutant shows defect in CPY processing; ortholog of human serine/threonine kinase 16 (STK16)","termid":"PBO:0088130"}


id: GO:0099006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into a host cell, following endocytosis, via permeabilization of the endosomal membrane by membrane penetration protein(s) of the symbiont. This process mediates the entry of some non-enveloped virus into eukaryotic cells. In some cases, viral membrane-penetration protein requires to be activated to display its membrane penetrating activity. Activation can be due to receptor binding or the acidic pH of the endosomal lumen.","definition_xrefs":["PMID:25055856","PMID:15329727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell via permeabilization of host membrane","termid":"GO:0140267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of endosomal membrane","synonyms":[{"name":"viral entry via permeabilization of endosomal membrane","type":"narrow"}],"termid":"GO:0099006"}


id: PATO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pink color having high brightness and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pink","termid":"PATO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pale pink","termid":"PATO:0002020"}


id: MONDO:0019400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular seminomatous germ cell tumor (obsolete MONDO:0019400)","termid":"MONDO:0019400","xrefs":{"Monarch":{"xref_id":"0019400"}}}


id: GO:0030567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Increases the rate of proteolysis catalyzed by thrombin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete thrombin activator activity (obsolete GO:0030567)","synonyms":[{"name":"prothrombin activator activity","type":"related"},{"name":"thrombin activator activity","type":"exact"}],"termid":"GO:0030567"}


id: MONDO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital melanocytic nevus (obsolete MONDO:0044790)","termid":"MONDO:0044790","xrefs":{"Monarch":{"xref_id":"0044790"}}}


id: GO:0007015
data:
  {"annotated_genes":["SJAG_01964","SJAG_02245","SJAG_03380","SJAG_02075","SJAG_03088","SJAG_01268","SJAG_00521","SJAG_03455","SJAG_02566","SJAG_01732","SJAG_01384","SJAG_01388","SJAG_04100","SJAG_04498","SJAG_01894","SJAG_04172","SJAG_01993","SJAG_03011","SJAG_00677","SJAG_00279","SJAG_04624","SJAG_03025","SJAG_04479","SJAG_02700","SJAG_04982","SJAG_02228","SJAG_00970","SJAG_04621","SJAG_02864","SJAG_04522","SJAG_04703","SJAG_01943","SJAG_00938","SJAG_03086"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105328],"is_not":false,"summary":null,"term":"GO:0007015"},{"annotations":[89085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051764"},{"annotations":[103064,97672,90437,98595,99623,99444,87911,104925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090135"},{"annotations":[76227,74623,75839,71190,75325,76992,93586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051017"},{"annotations":[99409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061572"},{"annotations":[115919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061573"},{"annotations":[69765,73286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[71191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051639"},{"annotations":[97478,64826,98596,93587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[89127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045010"},{"annotations":[97783,98043,89087,107885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[97673,74591,102491,106917,79515,76307,77935,77640,78668,79688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[75443,92089,79827,78930],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[115921,107887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"},{"annotations":[104911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110009"},{"annotations":[77211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903479"},{"annotations":[74266],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0034316"},{"annotations":[107367],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032231"},{"annotations":[77064,76533,66844,79078,67722],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"},{"relation_name":"part_of","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01388":null,"SJAG_01732":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04172":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04621":null,"SJAG_04624":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"actin filament organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin filament organisation","type":"exact"},{"name":"regulation of actin filament localization","type":"narrow"}],"termid":"GO:0007015","terms_by_termid":{"GO:0007015":null,"GO:0030041":null,"GO:0030042":null,"GO:0030833":null,"GO:0032231":null,"GO:0034314":null,"GO:0034316":null,"GO:0045010":null,"GO:0051016":null,"GO:0051017":null,"GO:0051639":null,"GO:0051764":null,"GO:0061572":null,"GO:0061573":null,"GO:0070649":null,"GO:0071520":null,"GO:0090135":null,"GO:0110009":null,"GO:1903479":null}}


id: GO:0030763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylpropanal oxime + S-adenosyl-L-methionine = 2-methylpropanal O-methyloxime + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:10996","EC:2.1.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"isobutyraldoxime O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04169","MetaCyc:ISOBUTYRALDOXIME-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-methylpropanal-oxime O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:aldoxime O-methyltransferase activity","type":"related"},{"name":"aldoxime O-methyltransferase activity","type":"related"},{"name":"aldoxime methyltransferase activity","type":"related"}],"termid":"GO:0030763"}


id: PBO:0082806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U4/U6-U5 snRNP complex; involved in second catalytic step of splicing; participates in spliceosomal assembly through its interaction with U1 snRNA; largest and most evolutionarily conserved protein of the spliceosome; mutations in human ortholog, PRPF8, cause Retinitis pigmentosa and missplicing in Myelodysplastic syndrome; mouse ortholog interacts with androgen receptor and may have a role in prostate cancer","termid":"PBO:0082806"}


id: GO:1905725
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at a microtubule end.","definition_xrefs":["PMID:12034771","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule","termid":"GO:0035372"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to microtubule end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule end","type":"exact"}],"termid":"GO:1905725","terms_by_termid":{"GO:1904518":null}}


id: MONDO:0005068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gross necrosis of the myocardium, as a result of interruption of the blood supply to the area, as in coronary thrombosis.","definition_xrefs":["NCIT:C27996"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"myocardial disorder","termid":"MONDO:0024643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"myocardial infarction","secondary_identifiers":["DOID:5844","EFO:0000612","HP:0001658","MESH:D009203","ICD10CM:I21","MEDGEN:10150","NANDO:2200248","SCTID:22298006","UMLS:C0027051"],"synonyms":[{"name":"MI","type":"exact"},{"name":"MI, myocardial infarction","type":"exact"},{"name":"heart attack","type":"exact"},{"name":"infarction (MI), myocardial","type":"exact"},{"name":"myocardial infarct","type":"exact"},{"name":"myocardial infarction","type":"exact"},{"name":"myocardial infarction (disease)","type":"exact"},{"name":"myocardial infarction, (MI)","type":"exact"}],"termid":"MONDO:0005068","xrefs":{"Monarch":{"xref_id":"0005068"}}}


id: PATO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a plant by virtue of the bearer's disposition to retain foliage.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evergreen (plant)","termid":"PATO:0001733"}


id: MONDO:0005858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma characterized by cystic changes and the presence of malignant glandular cells which contain intracytoplasmic mucin. It may arise from the ovary, pancreas, appendix, and lung.","definition_xrefs":["NCIT:C3776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mucinous cystadenocarcinoma","secondary_identifiers":["MEDGEN:60211","MESH:D018282","UMLS:C0206699","ICDO:8470/3","DOID:3603","EFO:0007378"],"synonyms":[{"name":"Pseudomucinous adenocarcinoma","type":"exact"},{"name":"Pseudomucinous cystadenocarcinoma","type":"exact"},{"name":"mucinous cystadenocarcinoma","type":"exact"},{"name":"mucinous cystadenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"mucinous cystadenocarcinoma NOS (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0005858","xrefs":{"Monarch":{"xref_id":"0005858"}}}


id: FYPO:0001207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to raffinose. Cells stop growing (and may die) at a concentration of raffinose that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to raffinose","synonyms":[{"name":"hypersensitive to raffinose","type":"exact"},{"name":"sensitive to raffinose during mitotic cell cycle","type":"related"},{"name":"sensitive to raffinose during vegetative growth","type":"exact"}],"termid":"FYPO:0001207"}


id: GO:1905549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["PMID:25819580","GOC:BHF_telomere","GOC:BHF","GOC:nc","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of subtelomeric heterochromatin assembly (obsolete GO:1905549)","synonyms":[{"name":"activation of telomeric heterochromatin assembly","type":"narrow"},{"name":"activation of telomeric heterochromatin formation","type":"narrow"},{"name":"positive regulation of telomeric heterochromatin assembly","type":"related"},{"name":"positive regulation of telomeric heterochromatin formation","type":"related"},{"name":"up regulation of telomeric heterochromatin assembly","type":"related"},{"name":"up regulation of telomeric heterochromatin formation","type":"related"},{"name":"up-regulation of telomeric heterochromatin assembly","type":"related"},{"name":"up-regulation of telomeric heterochromatin formation","type":"related"},{"name":"upregulation of telomeric heterochromatin assembly","type":"related"},{"name":"upregulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905549"}


id: GO:0033628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"regulates","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion mediated by integrin","synonyms":[{"name":"regulation of cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033628"}


id: PBO:0056703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meis homeobox 3 pseudogene 1","termid":"PBO:0056703"}


id: MONDO:0007540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple endocrine neoplasia Type 1 (MEN1) is a frequent form of MEN, a rare inherited cancer syndrome, characterized by the development of neuroendocrine tumors of the parathyroid, pancreas, and anterior pituitary gland, and less commonly the adrenal cortical gland, with other non-endocrine tumors in some patients.","definition_xrefs":["Orphanet:652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"familial primary hyperparathyroidism","termid":"MONDO:0016365"},{"relation_name":"is_a","term_name":"multiple endocrine neoplasia","termid":"MONDO:0017169"},{"relation_name":"is_a","term_name":"adrenal gland neoplasm","termid":"MONDO:0021227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"multiple endocrine neoplasia type 1","secondary_identifiers":["icd11.foundation:1638765741","GARD:3829","MedDRA:10028190","ICD9:237.4","MEDGEN:9957","MESH:D018761","NCIT:C3225","NORD:1466","SCTID:30664006","UMLS:C0025267","ICD9:258.01","NANDO:2200405","OMIM:131100","DOID:10017"],"synonyms":[{"name":"MEA 1","type":"related"},{"name":"MEA type 1","type":"exact"},{"name":"MEA type I","type":"exact"},{"name":"MEN1","type":"exact"},{"name":"MEN1 multiple endocrine neoplasia","type":"exact"},{"name":"MEN1 somatic mutations","type":"related"},{"name":"MEN1 syndrome","type":"exact"},{"name":"Wermer syndrome","type":"exact"},{"name":"Wermer's syndrome","type":"exact"},{"name":"endocrine adenomatosis multiple","type":"related"},{"name":"endocrine adenomatosis, multiple","type":"related"},{"name":"men 1","type":"exact"},{"name":"men type 1","type":"exact"},{"name":"men type I","type":"exact"},{"name":"multiple endocrine adenomatosis","type":"broad"},{"name":"multiple endocrine adenomatosis type 1","type":"exact"},{"name":"multiple endocrine adenomatosis type I","type":"exact"},{"name":"multiple endocrine adenomatosis, type I","type":"exact"},{"name":"multiple endocrine neoplasia 1","type":"exact"},{"name":"multiple endocrine neoplasia caused by mutation in MEN1","type":"exact"},{"name":"multiple endocrine neoplasia type 1","type":"exact"},{"name":"multiple endocrine neoplasia type 1 syndrome","type":"exact"},{"name":"multiple endocrine neoplasia type I","type":"exact"},{"name":"multiple endocrine neoplasia, type 1","type":"related"},{"name":"multiple endocrine neoplasia, type I","type":"exact"}],"termid":"MONDO:0007540","xrefs":{"Monarch":{"xref_id":"0007540"}}}


id: MONDO:0000982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Brown's tendon sheath syndrome (obsolete MONDO:0000982)","termid":"MONDO:0000982","xrefs":{"Monarch":{"xref_id":"0000982"}}}


id: GO:0010091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the formation of branches in plant hair cells. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"trichome morphogenesis","termid":"GO:0010090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome branching","secondary_identifiers":["GO:0048274"],"termid":"GO:0010091"}


id: GO:0070195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that consists of two identical subunits and binds growth hormone.","definition_xrefs":["GOC:mah","PMID:11445442","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"growth hormone receptor complex","termid":"GO:0070195"}


id: MONDO:0030049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,xx sex reversal 5","secondary_identifiers":["DOID:0080943","OMIM:618901","UMLS:C5394441","MEDGEN:1713956"],"synonyms":[{"name":"46,XX SEX REVERSAL 5","type":"exact"},{"name":"46,xx sex reversal 5","type":"exact"},{"name":"SRXX5","type":"exact"}],"termid":"MONDO:0030049","xrefs":{"Monarch":{"xref_id":"0030049"}}}


id: GO:0000426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Degradation of a peroxisome by microautophagy.","definition_xrefs":["PMID:12914914","GOC:pad","GOC:autophagy","PMID:15350980","PMID:16973210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"},{"relation_name":"is_a","term_name":"autophagy of peroxisome","termid":"GO:0030242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"micropexophagy","termid":"GO:0000426"}


id: _global:encompasses
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"during_which_starts","termid":"_global:during_which_starts"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encompasses","secondary_identifiers":["RO:0002085"],"termid":"_global:encompasses"}


id: PR:Q09127
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1001 gene.","definition_xrefs":["UniProtKB:Q09127","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L10-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.04","synonyms":[{"name":"QM protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SpQM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl1001","type":"exact"}],"termid":"PR:Q09127"}


id: MONDO:0007326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paroxysmal nonkinesigenic dyskinesia 1 (obsolete MONDO:0007326)","secondary_identifiers":["NANDO:1200519"],"termid":"MONDO:0007326","xrefs":{"Monarch":{"xref_id":"0007326"}}}


id: GO:0006643
data:
  {"annotated_genes":["SJAG_03801","SJAG_02885","SJAG_03672","SJAG_02085","SJAG_03066","SJAG_00846","SJAG_04107","SJAG_01227","SJAG_04178","SJAG_01416","SJAG_02590","SJAG_04975","SJAG_00176","SJAG_03878","SJAG_04165","SJAG_02706","SJAG_04550","SJAG_00506","SJAG_02842","SJAG_01857","SJAG_02913","SJAG_03076","SJAG_04119","SJAG_01057","SJAG_06425","SJAG_05327","SJAG_00068","SJAG_00519","SJAG_02488","SJAG_04578","SJAG_01570","SJAG_01356","SJAG_02168","SJAG_00630","SJAG_04924","SJAG_03015","SJAG_04986","SJAG_01860","SJAG_00261","SJAG_05311","SJAG_03690","SJAG_01219","SJAG_05278","SJAG_01300","SJAG_03953","SJAG_03292","SJAG_00880","SJAG_00831","SJAG_04337","SJAG_02056","SJAG_06383","SJAG_04878","SJAG_02429","SJAG_04913","SJAG_00295","SJAG_02776","SJAG_02523","SJAG_02804","SJAG_03115","SJAG_04881","SJAG_03506","SJAG_02305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110210],"is_not":false,"summary":null,"term":"GO:0006643"},{"annotations":[72592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006666"},{"annotations":[78850,108573,73959,78690,76657,77781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[72872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006672"},{"annotations":[60389,92761,69591,103526,72905,76269,77296,58343,87199,77289,58230,57834,74606,76851,77564,63027,63366,62452,75379,103464,75356,77299,77653,73090,58183,78023,89312,71590,72537,76166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[75864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006673"},{"annotations":[73533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"},{"annotations":[95010,91569,75328,112283,79016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[100499,110657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046467"},{"annotations":[108574,89591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046521"},{"annotations":[109371,77420,90362,72874,94901,72593,97955,73535,73444,91709,93322,101171,117258,100004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030148"},{"annotations":[71778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006665"},{"annotations":[76656,96660,78689,105749,73517,109463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving membrane lipids, any lipid found in or associated with a biological membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00176":null,"SJAG_00261":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00519":null,"SJAG_00630":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00880":null,"SJAG_01057":null,"SJAG_01219":null,"SJAG_01227":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01857":null,"SJAG_01860":null,"SJAG_02056":null,"SJAG_02085":null,"SJAG_02168":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02590":null,"SJAG_02706":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02842":null,"SJAG_02885":null,"SJAG_02913":null,"SJAG_03015":null,"SJAG_03066":null,"SJAG_03076":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03690":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04107":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04178":null,"SJAG_04337":null,"SJAG_04550":null,"SJAG_04578":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_04986":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"membrane lipid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"membrane lipid metabolism","type":"exact"}],"termid":"GO:0006643","terms_by_termid":{"GO:0006506":null,"GO:0006643":null,"GO:0006665":null,"GO:0006666":null,"GO:0006672":null,"GO:0006673":null,"GO:0006676":null,"GO:0030148":null,"GO:0046467":null,"GO:0046512":null,"GO:0046513":null,"GO:0046521":null,"GO:0051999":null}}


id: GO:2001300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a lipoxin. A lipoxin is a non-classic eicosanoid and signaling molecule that has four conjugated double bonds and is derived from arachidonic acid.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipoxin metabolic process","synonyms":[{"name":"lipoxin metabolism","type":"exact"}],"termid":"GO:2001300"}


id: GO:1904425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of GTP binding.","definition_xrefs":["GO_REF:0000059","PMID:21454546","GOC:TermGenie","PMID:19066305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of GTP binding","synonyms":[{"name":"down regulation of GTP binding","type":"exact"},{"name":"down-regulation of GTP binding","type":"exact"},{"name":"downregulation of GTP binding","type":"exact"},{"name":"inhibition of GTP binding","type":"narrow"}],"termid":"GO:1904425"}


id: GO:0009221
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_03771","SJAG_02874","SJAG_04627","SJAG_04657","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107013,95244,92201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[69705,79135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[70638,92202,68266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[70636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[79243,69704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine deoxyribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide biosynthetic process","termid":"GO:0009265"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY0-166"],"synonyms":[{"name":"pyrimidine deoxyribonucleotide anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleotide biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleotide formation","type":"exact"},{"name":"pyrimidine deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009221","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null}}


id: PBO:0004896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ/TPR domain protein DNAJC7 family","termid":"PBO:0004896"}


id: PBO:0087478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Ccr4-Not complex that mediates 3' to 5' mRNA deadenylation; exonuclease of the DEDD superfamily","termid":"PBO:0087478"}


id: GO:1904447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of folic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:BHF","PMID:19762432","GO_REF:0000075","GOC:hal","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"folate import across plasma membrane","synonyms":[{"name":"folate import into cell","type":"exact"},{"name":"folic acid import across plasma membrane","type":"related"}],"termid":"GO:1904447"}


id: PBO:0079381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I","termid":"PBO:0079381"}


id: MONDO:0800329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"febrile seizures, familial","termid":"MONDO:0000032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"febrile seizures, familial, 3a","secondary_identifiers":["MEDGEN:442807","UMLS:C2751756"],"synonyms":[{"name":"FEB3A","type":"exact"}],"termid":"MONDO:0800329","xrefs":{"Monarch":{"xref_id":"0800329"}}}


id: FYPO:0002178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which cells in the population are viable, and some cells are longer than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable mixed population including long cells (obsolete FYPO:0002178)","synonyms":[{"name":"long low penetrance","type":"related"}],"termid":"FYPO:0002178"}


id: GO:0016821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrolase activity, acting on acid anhydrides, involved in cellular and subcellular movement (obsolete GO:0016821)","synonyms":[{"name":"hydrolase activity, acting on acid anhydrides, involved in cellular and subcellular movement","type":"exact"}],"termid":"GO:0016821"}


id: PBO:0081747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 677","termid":"PBO:0081747"}


id: GO:0047843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-D-gluconate + A = 2,5-didehydro-D-gluconate + AH(2).","definition_xrefs":["RHEA:12368","EC:1.1.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dehydrogluconate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07153","MetaCyc:DEHYDROGLUCONATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2-dehydro-D-gluconate:acceptor 2-oxidoreductase activity","type":"related"},{"name":"2-keto-D-gluconate dehydrogenase activity","type":"related"},{"name":"2-oxogluconate dehydrogenase activity","type":"related"},{"name":"alpha-ketogluconate dehydrogenase activity","type":"related"},{"name":"ketogluconate dehydrogenase activity","type":"related"}],"termid":"GO:0047843"}


id: PR:O60178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nta1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.03c","synonyms":[{"name":"NT-amidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nta1","type":"exact"}],"termid":"PR:O60178"}


id: MONDO:1011501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex that occurs in water buffalo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, non-human animal","termid":"MONDO:1011428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, water buffalo","secondary_identifiers":["OMIA:002082-89462"],"termid":"MONDO:1011501","xrefs":{"Monarch":{"xref_id":"1011501"}}}


id: PR:000044743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase dma1 (Schizosaccharomyces pombe) that lacks ubiquitinated lysine.","definition_xrefs":["PMID:29975113","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"E3 ubiquitin-protein ligase dma1","termid":"PR:000027845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dma1/UnUbiq","pombase_gene_id":"SPAC17G8.10c","synonyms":[{"name":"PomBase_original_PRO_term_name: E3 ubiquitin-protein ligase dma1 non-ubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-dma1/UnUbiq","type":"exact"},{"name":"dma1/UnUbiq","type":"exact"}],"termid":"PR:000044743"}


id: PR:Q10497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26F1.11 gene.","definition_xrefs":["UniProtKB:Q10497","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26F1.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.11","synonyms":[{"name":"Spom972h-SPAC26F1.11","type":"exact"}],"termid":"PR:Q10497"}


id: PBO:0066918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 220","termid":"PBO:0066918"}


id: PBO:0050667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 4 like","termid":"PBO:0050667"}


id: PBO:0088676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 3 Pre9","termid":"PBO:0088676"}


id: GO:0140455
data:
  {"annotated_genes":["SJAG_01556","SJAG_02419","SJAG_00436","SJAG_02341","SJAG_00173","SJAG_03794","SJAG_00552"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104758,118320],"is_not":false,"summary":null,"term":"GO:0140455"},{"annotations":[109389,107756,109492,113365,110083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are either targeted to cytoplasmic proteasomes for degradation or protected by chaperones to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00436":null,"SJAG_00552":null,"SJAG_01556":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"cytoplasm protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140455","terms_by_termid":{"GO:0071629":null,"GO:0140455":null}}


id: SO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 12th residue (a lysine), from the start of the H2B protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK12_acetylation_site","synonyms":[{"name":"H2BK12 acetylation site","type":"exact"},{"name":"H2BK12ac","type":"exact"}],"termid":"SO:0001937"}


id: MONDO:0015729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 16 is a rare chromosomal anomaly syndrome with a highly variable phenotype ranging from minor anomalies with normal development to intrauterine growth retardation, abnormal skin pigmentation, craniofacial and body asymmetry, cardiac (e.g. ventricular septal defect) and genital (e.g. hypospadias, cryptorchidism) anomalies, scoliosis and hearing loss to neonatal death. Additional features observed include skeletal malformations (e.g. clino/polydactyly, talipes), mild facial dysmorphism, and developmental delay.","definition_xrefs":["Orphanet:1708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 16 trisomy","termid":"MONDO:0022180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 16","secondary_identifiers":["UMLS:C4707009","GARD:18741","MEDGEN:1633950","MESH:C538041","SCTID:764621006"],"synonyms":[{"name":"Mosaic trisomy chromosome 16","type":"exact"},{"name":"Mosaic trisomy type 16","type":"exact"},{"name":"trisomy 16 mosaicism","type":"exact"}],"termid":"MONDO:0015729","xrefs":{"Monarch":{"xref_id":"0015729"}}}


id: GO:0052594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: aminoacetone + H2O + O2 = methylglyoxal + NH3 + hydrogen peroxide + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoacetone:oxygen oxidoreductase(deaminating) activity (obsolete GO:0052594)","termid":"GO:0052594"}


id: PBO:0062641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily K member 2 pseudogene","termid":"PBO:0062641"}


id: PBO:0048408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated kinase 1B","termid":"PBO:0048408"}


id: GO:0009889
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id: MONDO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the arteries that is characterized by the presence of granulomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulomatous angiitis","secondary_identifiers":["MEDGEN:9088","DOID:2555","MESH:D020293","UMLS:C0018202","NCIT:C34653"],"synonyms":[{"name":"Granulomatous arteritis","type":"exact"}],"termid":"MONDO:0002341","xrefs":{"Monarch":{"xref_id":"0002341"}}}


id: PBO:0039247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDH1L1 antisense RNA 1","termid":"PBO:0039247"}


id: PBO:0082428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Blocked reading frame; may encode a non-functional member of the conserved, often subtelomerically-encoded Cos protein family","termid":"PBO:0082428"}


id: PBO:0050069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor 13","termid":"PBO:0050069"}


id: PBO:0001831
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative polyadenylation","termid":"PBO:0001831"}


id: GO:0052729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + N,N-dimethylglycine = S-adenosyl-L-homocysteine + betaine.","definition_xrefs":["RHEA:10072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"dimethylglycine N-methyltransferase activity","secondary_identifiers":["EC:2.1.1.161","KEGG_REACTION:R07244","MetaCyc:RXN-9680"],"synonyms":[{"name":"ApDMT","type":"related"},{"name":"S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase activity","type":"related"}],"termid":"GO:0052729"}


id: PBO:0048914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member I, pseudogene","termid":"PBO:0048914"}


id: PBO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup40","termid":"PBO:0000924"}


id: MONDO:0017988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal atrial tachycardia is a rare supraventricular arrhythmia in neonates and young infants that is characterized by multiple P waves with varying P wave morphology and is usually asymptomatic.","definition_xrefs":["Orphanet:3282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"multifocal atrial tachycardia","secondary_identifiers":["HP:0011701","icd11.foundation:262929566","UMLS:C0221158","MEDGEN:66362","ICD9:427.89","SCTID:49982000","GARD:1235"],"synonyms":[{"name":"MAT","type":"exact"},{"name":"chaotic atrial tachycardia","type":"exact"},{"name":"multifocal atrial tachycardia","type":"exact"},{"name":"multifocal atrial tachycardia (disease)","type":"exact"}],"termid":"MONDO:0017988","xrefs":{"Monarch":{"xref_id":"0017988"}}}


id: GO:0032510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to lysosomes by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the lysosome.","definition_xrefs":["GOC:mah","PMID:16689637","PMID:12461556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome to lysosome transport","termid":"GO:0008333"},{"relation_name":"is_a","term_name":"endosome transport via multivesicular body sorting pathway","termid":"GO:0032509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"endosome to lysosome transport via multivesicular body sorting pathway","synonyms":[{"name":"endosome to lysosome transport via MVB sorting pathway","type":"exact"}],"termid":"GO:0032510"}


id: PBO:0091234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall structural constituent Isp3","termid":"PBO:0091234"}


id: MONDO:0005473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any condition affecting the anatomic and functional characteristics of the temporomandibular joint.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporomandibular joint disorder","secondary_identifiers":["EFO:0005279","MESH:D013705","NCIT:C63709","ICD9:524.60","MEDGEN:21092","ICD9:524.69","UMLS:C0039494","SCTID:41888000"],"synonyms":[{"name":"TMD","type":"exact"}],"termid":"MONDO:0005473","xrefs":{"Monarch":{"xref_id":"0005473"}}}


id: FYPO:0004441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in the cytosol is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"},{"relation_name":"is_a","term_name":"decreased level of substance in cytosol","termid":"FYPO:0001605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytosolic calcium level","synonyms":[{"name":"decreased cytosolic calcium ion level","type":"exact"},{"name":"decreased cytosolic calcium ion level during vegetative growth","type":"exact"},{"name":"decreased cytosolic calcium level during mitotic cell cycle","type":"related"},{"name":"decreased level of calcium ions in cytosol","type":"exact"},{"name":"decreased levels of free cytosolic calcium","type":"exact"},{"name":"reduced cytosolic calcium level","type":"exact"}],"termid":"FYPO:0004441"}


id: GO:0000258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (isoleucine or valine)(out) + Na+(out) = (isoleucine or valine)(in) + Na+(in).","definition_xrefs":["TC:2.A.26.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete isoleucine/valine:sodium symporter activity (obsolete GO:0000258)","synonyms":[{"name":"isoleucine/valine:sodium symporter activity","type":"exact"}],"termid":"GO:0000258"}


id: PBO:0043739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 18","termid":"PBO:0043739"}


id: GO:0035342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleoside transport","termid":"GO:0032248"},{"relation_name":"is_a","term_name":"regulation of inosine transport","termid":"GO:0035341"},{"relation_name":"positively_regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inosine transport","synonyms":[{"name":"positive regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035342"}


id: MONDO:1011150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ankylosing spondylitis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ankylosing spondylitis, non-human animal","termid":"MONDO:1010292"},{"relation_name":"is_a","term_name":"rheumatoid arthritis, dog","termid":"MONDO:1011153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankylosing spondylitis, dog","secondary_identifiers":["OMIA:000046-9615"],"termid":"MONDO:1011150","xrefs":{"Monarch":{"xref_id":"1011150"}}}


id: MONDO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic, usually bacterial infectious process affecting the endometrium. It may extend to the myometrium and parametrial tissues. Symptoms include lower abdominal pain, vaginal discharge, and vaginal bleeding.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"mucositis","termid":"MONDO:0020579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometritis","secondary_identifiers":["SCTID:78623009","MEDGEN:41789","DOID:1002","MESH:D004716","UMLS:C0014179","NCIT:C26764","EFO:1001312"],"synonyms":[{"name":"endometrium inflammation","type":"exact"},{"name":"inflammation of endometrium","type":"exact"},{"name":"uterine infection","type":"exact"}],"termid":"MONDO:0000918","xrefs":{"Monarch":{"xref_id":"0000918"}}}


id: GO:0141203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont prevents host complement activation by recruiting host proteases, destroying the complement before it has its effect on the symbiont.","definition_xrefs":["PMID:15792635","PMID:34305859","PMID:26945067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by activation of host proteases","synonyms":[{"name":"symbiont-mediated suppression of host complement activation by recruitment of host proteases","type":"narrow"}],"termid":"GO:0141203"}


id: GO:0050230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA 4,6-diamino-5-formamidopyrimidine = DNA adenine + H2O.","definition_xrefs":["MetaCyc:PURINE-IMIDAZOLE-RING-CYCLASE-RXN","EC:4.3.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0009975","GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"purine imidazole-ring cyclase activity","synonyms":[{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing; DNA-adenine-forming)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine C8-N9-lyase (cyclizing; DNA-adenine-forming)","type":"related"}],"termid":"GO:0050230"}


id: GO:0099098
data:
  {"annotated_genes":["SJAG_04387","SJAG_03073","SJAG_02509","SJAG_04003","SJAG_03835","SJAG_02737","SJAG_03673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113691,116688,101199,74741,109360,70455,107182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"}]},"cv_name":"biological_process","definition":"The movement of a cellular component as a result of microtubule polymerization.","definition_xrefs":["GOC:cjm","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule polymerization based movement","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0099098","terms_by_termid":{"GO:0098863":null}}


id: PATO:0001775
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the dorsal-ventral axis.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positional polarity","termid":"PATO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal-ventral polarity","termid":"PATO:0001775"}


id: PBO:0051968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isovaleryl-CoA dehydrogenase","termid":"PBO:0051968"}


id: SO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of a primary transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"},{"relation_name":"part_of","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary_transcript_region","synonyms":[{"name":"primary transcript region","type":"exact"}],"termid":"SO:0000835"}


id: GO:1905570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferrichrome biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:al","PMID:654321","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of siderophore biosynthetic process","termid":"GO:1900706"},{"relation_name":"is_a","term_name":"regulation of ferrichrome biosynthetic process","termid":"GO:1905568"},{"relation_name":"positively_regulates","term_name":"ferrichrome biosynthetic process","termid":"GO:0031169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferrichrome biosynthetic process","synonyms":[{"name":"activation of ferrichrome anabolism","type":"narrow"},{"name":"activation of ferrichrome biosynthesis","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of ferrichrome formation","type":"narrow"},{"name":"activation of ferrichrome synthesis","type":"narrow"},{"name":"positive regulation of ferrichrome anabolism","type":"exact"},{"name":"positive regulation of ferrichrome biosynthesis","type":"exact"},{"name":"positive regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of ferrichrome formation","type":"exact"},{"name":"positive regulation of ferrichrome synthesis","type":"exact"},{"name":"up regulation of ferrichrome anabolism","type":"exact"},{"name":"up regulation of ferrichrome biosynthesis","type":"exact"},{"name":"up regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"up regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of ferrichrome formation","type":"exact"},{"name":"up regulation of ferrichrome synthesis","type":"exact"},{"name":"up-regulation of ferrichrome anabolism","type":"exact"},{"name":"up-regulation of ferrichrome biosynthesis","type":"exact"},{"name":"up-regulation of ferrichrome biosynthetic process","type":"exact"},{"name":"up-regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of ferrichrome formation","type":"exact"},{"name":"up-regulation of ferrichrome synthesis","type":"exact"},{"name":"upregulation of ferrichrome anabolism","type":"exact"},{"name":"upregulation of ferrichrome biosynthesis","type":"exact"},{"name":"upregulation of ferrichrome biosynthetic process","type":"exact"},{"name":"upregulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of ferrichrome formation","type":"exact"},{"name":"upregulation of ferrichrome synthesis","type":"exact"}],"termid":"GO:1905570"}


id: GO:1904042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cystathionine beta-synthase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:hal","PMID:24416422","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lyase activity","termid":"GO:0051350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cystathionine beta-synthase activity","synonyms":[{"name":"down regulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"down regulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"down regulation of beta-thionase activity","type":"exact"},{"name":"down regulation of cystathionine beta-synthase activity","type":"exact"},{"name":"down regulation of methylcysteine synthase activity","type":"exact"},{"name":"down regulation of serine sulfhydrase activity","type":"exact"},{"name":"down regulation of serine sulfhydrylase activity","type":"exact"},{"name":"down-regulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"down-regulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"down-regulation of beta-thionase activity","type":"exact"},{"name":"down-regulation of cystathionine beta-synthase activity","type":"exact"},{"name":"down-regulation of methylcysteine synthase activity","type":"exact"},{"name":"down-regulation of serine sulfhydrase activity","type":"exact"},{"name":"down-regulation of serine sulfhydrylase activity","type":"exact"},{"name":"downregulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"downregulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"downregulation of beta-thionase activity","type":"exact"},{"name":"downregulation of cystathionine beta-synthase activity","type":"exact"},{"name":"downregulation of methylcysteine synthase activity","type":"exact"},{"name":"downregulation of serine sulfhydrase activity","type":"exact"},{"name":"downregulation of serine sulfhydrylase activity","type":"exact"},{"name":"inhibition of L-serine hydro-lyase (adding homocysteine)","type":"narrow"},{"name":"inhibition of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"narrow"},{"name":"inhibition of beta-thionase activity","type":"narrow"},{"name":"inhibition of cystathionine beta-synthase activity","type":"narrow"},{"name":"inhibition of methylcysteine synthase activity","type":"narrow"},{"name":"inhibition of serine sulfhydrase activity","type":"narrow"},{"name":"inhibition of serine sulfhydrylase activity","type":"narrow"},{"name":"negative regulation of L-serine hydro-lyase (adding homocysteine)","type":"exact"},{"name":"negative regulation of L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"exact"},{"name":"negative regulation of beta-thionase activity","type":"exact"},{"name":"negative regulation of methylcysteine synthase activity","type":"exact"},{"name":"negative regulation of serine sulfhydrase activity","type":"exact"},{"name":"negative regulation of serine sulfhydrylase activity","type":"exact"}],"termid":"GO:1904042"}


id: PBO:0052740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 32","termid":"PBO:0052740"}


id: PBO:0084770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NAD+ transporter; member of the mitochondrial carrier subfamily (see also YIA6); has putative human ortholog; YEA6 has a paralog, YIA6, that arose from the whole genome duplication; human NAD+ transporter MCART1/SLC25A51 functionally complements the yia6 yea6 double null mutant, and yeast YEA6 reciprocally complements defects in MCART1/SLC25A51 null cells","termid":"PBO:0084770"}


id: RO:0003307
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the presence of the entity reduces or eliminates some or all aspects of the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_severity_of_condition","termid":"RO:0003305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ameliorates_condition","termid":"RO:0003307"}


id: MONDO:1011583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta, non-human animal","termid":"MONDO:1011454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, sheep","secondary_identifiers":["OMIA:000754-9940"],"termid":"MONDO:1011583","xrefs":{"Monarch":{"xref_id":"1011583"}}}


id: PBO:0053437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 382","termid":"PBO:0053437"}


id: PBO:0005815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm8 (predicted)","termid":"PBO:0005815"}


id: PBO:0087081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L42A; homologous to mammalian ribosomal protein L36A, no bacterial homolog; RPL42A has a paralog, RPL42B, that arose from the whole genome duplication","termid":"PBO:0087081"}


id: GO:0072069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the distal convoluted tubule cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"distal convoluted tubule development","termid":"GO:0072025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DCT cell differentiation","synonyms":[{"name":"distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:0072069"}


id: PBO:0056195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A6","termid":"PBO:0056195"}


id: MONDO:0021316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the minor salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland cancer","termid":"MONDO:0004669"},{"relation_name":"is_a","term_name":"vestibule of mouth cancer","termid":"MONDO:0004727"},{"relation_name":"is_a","term_name":"neoplasm of minor salivary gland","termid":"MONDO:0021370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"malignant tumor of minor salivary gland","secondary_identifiers":["SCTID:363485006","UMLS:C0345614","NCIT:C4410","MEDGEN:91049"],"synonyms":[{"name":"cancer of minor salivary gland","type":"exact"},{"name":"malignant minor salivary gland neoplasm","type":"exact"},{"name":"malignant minor salivary gland tumor","type":"exact"},{"name":"malignant minor salivary gland tumour","type":"exact"},{"name":"malignant neoplasm of minor salivary gland","type":"exact"},{"name":"malignant neoplasm of the minor salivary gland","type":"exact"},{"name":"malignant tumor of the minor salivary gland","type":"exact"},{"name":"malignant tumour of the minor salivary gland","type":"exact"},{"name":"minor salivary gland cancer","type":"related"}],"termid":"MONDO:0021316","xrefs":{"Monarch":{"xref_id":"0021316"}}}


id: GO:0042098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a T cell population by cell division. Follows T cell activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"},{"relation_name":"is_a","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell proliferation","secondary_identifiers":["GO:0042111"],"synonyms":[{"name":"T lymphocyte proliferation","type":"exact"},{"name":"T-cell proliferation","type":"exact"},{"name":"T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042098"}


id: PBO:0086380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent permease of the ABC transporter family","termid":"PBO:0086380"}


id: FYPO:0002424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle. Cortical patches are normally present at both old and new ends of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cortical patch localization","termid":"FYPO:0001294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal actin cortical patch localization during mitotic interphase","synonyms":[{"name":"normal F-actin patch localization during mitotic interphase","type":"exact"},{"name":"normal actin cortical patch localisation during mitotic interphase","type":"exact"},{"name":"normal actin cortical patch localization at non-growing end during mitotic interphase","type":"related"},{"name":"normal actin cortical patch localization during mitotic interphase during vegetative growth","type":"exact"},{"name":"normal actin cortical patch location during mitotic interphase","type":"related"},{"name":"normal actin patch localization during mitotic interphase","type":"exact"}],"termid":"FYPO:0002424"}


id: GO:0036275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 5-fluorouracil stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 5-fluorouracil","synonyms":[{"name":"response to 5-fluoropyrimidine-2,4(1H,3H)-dione","type":"exact"},{"name":"response to fluorouracil","type":"exact"}],"termid":"GO:0036275"}


id: PBO:0017776
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by canine rab8","termid":"PBO:0017776"}


id: PBO:0062183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 3 pseudogene","termid":"PBO:0062183"}


id: GO:1990923
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of at least EXD1, TDRD12 and some PIWI protein. The complex is required for MILI slicing-triggered biogenesis and loading of MIWI2 piRNAs.","definition_xrefs":["PMID:26669262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PET complex","termid":"GO:1990923"}


id: PBO:0016052
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu6 can be transcribed by human RNA polymerase III in cell extracts","termid":"PBO:0016052"}


id: MONDO:0000801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a green mud crab.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete green mud crab allergy (obsolete MONDO:0000801)","secondary_identifiers":["DOID:0060526"],"synonyms":[{"name":"Scylla paramamosain allergy","type":"exact"},{"name":"allergy of green mud crab","type":"exact"},{"name":"crab allergy","type":"related"},{"name":"green mud crab allergic disease","type":"exact"}],"termid":"MONDO:0000801","xrefs":{"Monarch":{"xref_id":"0000801"}}}


id: GO:0102771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-(1,2-saturated acyl)sphinganine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an N-[(2'R)-hydroxyacyl]sphinganine + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["RHEA:46512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid 2-hydroxylase activity","termid":"GO:0080132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydroceramide fatty acyl 2-hydroxylase activity","secondary_identifiers":["EC:1.14.18.7","MetaCyc:RXN-7796"],"synonyms":[{"name":"plant sphingolipid fatty acid 2-hydroxylase actitivy","type":"exact"},{"name":"sphingolipid very long chain fatty acid alpha-hydroxylase activity","type":"related"}],"termid":"GO:0102771"}


id: GO:0036391
data:
  {"annotated_genes":["SJAG_01277","SJAG_02645","SJAG_00118","SJAG_01658","SJAG_04566","SJAG_04703","SJAG_00663","SJAG_03374","SJAG_04375","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97572,97648,99868,100712,101519,103670,107706,112519,117612,118375],"is_not":false,"summary":null,"term":"GO:0036391"}]},"cv_name":"cellular_component","definition":"A ring-shaped structure that forms at the medial cortex of a symmetrically dividing cell at the onset of cytokinesis; composed of members of the conserved family of filament forming proteins called septins as well as septin-associated proteins.","definition_xrefs":["GOC:vw","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"},{"relation_name":"part_of","term_name":"medial cortex","termid":"GO:0031097"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03703":null,"SJAG_04375":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"medial cortex septin ring","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036391","terms_by_termid":{"GO:0036391":null}}


id: PBO:0110484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM2 pseudogene 2","termid":"PBO:0110484"}


id: PBO:0072849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 4","termid":"PBO:0072849"}


id: PBO:0012530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_division_of","termid":"PBO:0012530"}


id: PBO:0042368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD177 molecule","termid":"PBO:0042368"}


id: PBO:0058329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4703","termid":"PBO:0058329"}


id: MOD:00362
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-arginine residue and a two-iron two-sulfur cluster to tris-L-cysteinyl L-arginyl diiron disulfide.","definition_xrefs":["PubMed:14704425","RESID:AA0357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-arginine residue","termid":"MOD:02076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-arginyl diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"di-mu-sulfido(N(eta1)-arginyl-S-cysteinyliron)(bis-S-cysteinyliron)","type":"exact"},{"name":"tris-L-cysteinyl L-arginyl diiron disulfide","type":"exact"}],"termid":"MOD:00362"}


id: PBO:0089906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase, KAT5 family Mst1","termid":"PBO:0089906"}


id: GO:0042763
data:
  {"annotated_genes":["SJAG_04001","SJAG_01825","SJAG_01469","SJAG_00430","SJAG_00974","SJAG_04948","SJAG_01084","SJAG_03721","SJAG_04080","SJAG_04275","SJAG_01697","SJAG_03250","SJAG_02169","SJAG_04483","SJAG_04184","SJAG_01769","SJAG_00405","SJAG_04781","SJAG_03746","SJAG_02368","SJAG_01855","SJAG_02736","SJAG_03536","SJAG_03638","SJAG_03145","SJAG_00826","SJAG_03587","SJAG_04470","SJAG_00663","SJAG_03013","SJAG_02076","SJAG_03688","SJAG_03915","SJAG_03079","SJAG_04922","SJAG_03483","SJAG_00971","SJAG_00821","SJAG_01867"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91529,114206,115077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042764"},{"annotations":[112775,91619],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905754"},{"annotations":[93625,87971,91052,92651,117250,90484,91263,96383,104735,95126,107135,118754,109051,97307,93330,101237,100606,103006,108814,101460,115983,116667,94222,103054,113823,103923],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005628"},{"annotations":[118270,102668,98586],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070056"},{"annotations":[105049,102669,118271],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070057"},{"annotations":[105771,115712,99874,94262],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"A cell or part of the cell that constitutes an early developmental stage of a spore, a small reproductive body that is highly resistant to desiccation and heat and is capable of growing into a new organism, produced especially by certain bacteria, fungi, algae, and nonflowering plants.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00430":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01084":null,"SJAG_01469":null,"SJAG_01697":null,"SJAG_01769":null,"SJAG_01825":null,"SJAG_01855":null,"SJAG_01867":null,"SJAG_02076":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03079":null,"SJAG_03145":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03587":null,"SJAG_03638":null,"SJAG_03688":null,"SJAG_03721":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04080":null,"SJAG_04184":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_04948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intracellular immature spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore","type":"related"}],"termid":"GO:0042763","terms_by_termid":{"GO:0005628":null,"GO:0032169":null,"GO:0042764":null,"GO:0070056":null,"GO:0070057":null,"GO:1905754":null}}


id: PBO:0082721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex involved in transcription elongation; binds to and modulates the activity of RNA polymerases I and II; required for expression of a subset of genes, including cyclin genes; involved in SER3 repression by helping to maintain SRG1 transcription-dependent nucleosome occupancy; contains TPR repeats","termid":"PBO:0082721"}


id: PBO:0085785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unassigned function; involved in activation of the Pma1p plasma membrane H+-ATPase by glucose; contains peptide signal for membrane localization","termid":"PBO:0085785"}


id: FYPO:0001188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Calcofluor White. Cells stop growing (and may die) at a concentration of Calcofluor White that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to Calcofluor White","synonyms":[{"name":"hypersensitive to Calcofluor White","type":"exact"},{"name":"sensitive to Calcofluor White during mitotic cell cycle","type":"related"},{"name":"sensitive to Calcofluor White during vegetative growth","type":"exact"}],"termid":"FYPO:0001188"}


id: PBO:0048279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 14","termid":"PBO:0048279"}


id: MONDO:0017019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary interstitial lung disease specific to childhood","termid":"MONDO:0017015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial lung disease specific to infancy","secondary_identifiers":["MEDGEN:1842984","Orphanet:264694","UMLS:C5679737"],"synonyms":[{"name":"ILD specific to infancy","type":"exact"}],"termid":"MONDO:0017019","xrefs":{"Monarch":{"xref_id":"0017019"}}}


id: GO:0120065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the widest part of the pylorus that is continuous with the body of the stomach.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach pylorus smooth muscle contraction","termid":"GO:0120064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyloric antrum smooth muscle contraction","synonyms":[{"name":"antrum smooth muscle contraction","type":"exact"}],"termid":"GO:0120065"}


id: PBO:0027612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-tubulin_complex_assembly","termid":"PBO:0027612"}


id: PBO:0003484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide N-glycanase (predicted)","termid":"PBO:0003484"}


id: PBO:0060831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN4 antisense RNA 1","termid":"PBO:0060831"}


id: GO:0075311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporangium development, a process that leads to the formation of sporangium, a single-celled or many-celled structure in which spores are produced, as in fungi, algae, mosses, and ferns, gymnosperms, angiosperms.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"positively_regulates","term_name":"sporangium development","termid":"GO:0043582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporangium development","termid":"GO:0075311"}


id: PBO:0088959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex actin-related protein subunit Arp3","termid":"PBO:0088959"}


id: MONDO:0019796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrocephalosyndactyly (ACS) syndromes represent a group of inherited congenital malformation disorders characterized by craniosynostosis and fusion or webbing of the fingers or toes, often with other associated manifestations.","definition_xrefs":["Orphanet:946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrocephalosyndactyly","secondary_identifiers":["MedDRA:10000590","MEDGEN:267602","UMLS:C1510455","SCTID:268262006","DOID:12960","ICD9:755.55","NCIT:C34348"],"synonyms":[{"name":"ACS","type":"exact"},{"name":"acrocephalosyndactylia","type":"exact"},{"name":"acrocephalosyndactyly","type":"exact"}],"termid":"MONDO:0019796","xrefs":{"Monarch":{"xref_id":"0019796"}}}


id: PBO:0085091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome-associated RNA binding protein; involved in surveillance of pre-rRNAs and pre-mRNAs, and the degradation of cryptic non-coding RNAs (ncRNA); copurifies with ribosomes; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085091"}


id: MONDO:0020243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete colobomatous and areolar dystrophy (obsolete MONDO:0020243)","secondary_identifiers":["Orphanet:98665"],"termid":"MONDO:0020243","xrefs":{"Monarch":{"xref_id":"0020243"}}}


id: PBO:0038275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_insertion_and_mutation","termid":"PBO:0038275"}


id: PATO:0001248
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark cyan","termid":"PATO:0001248"}


id: PBO:0004860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase (predicted)","termid":"PBO:0004860"}


id: PBO:0039386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha 1C","termid":"PBO:0039386"}


id: SO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 120th residue (a lysine), from the start of the H2B histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK120_acetylation_site","synonyms":[{"name":"H2BK120 acetylation site","type":"exact"},{"name":"H2BK120ac","type":"exact"}],"termid":"SO:0001940"}


id: MONDO:0015403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-involuting congenital hemangioma (NICH) is a rare type of infantile hemangioma, which is a tumor that forms from the abnormal growth of blood vessels in the skin. NICH looks like an oval,purplish mark or bump that can occur on any part of the body. NICH is present from birth (congenital) and increases in size as the child grows. Unlike other hemangiomas, NICH do not disappear spontaneously (involute).","definition_xrefs":["GARD:0010890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hemangioma","termid":"MONDO:0018715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-involuting congenital hemangioma","secondary_identifiers":["GARD:10890","UMLS:C1275417","NCIT:C172208","SCTID:703295003","MEDGEN:698685","Orphanet:141179"],"synonyms":[{"name":"NICH","type":"exact"},{"name":"noninvoluting congenital hemangioma","type":"exact"}],"termid":"MONDO:0015403","xrefs":{"Monarch":{"xref_id":"0015403"}}}


id: GO:0042048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism in response to an odor.","definition_xrefs":["GOC:pr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemosensory behavior","termid":"GO:0007635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory behavior","synonyms":[{"name":"behavioral response to scent","type":"exact"},{"name":"behavioral response to smell","type":"exact"},{"name":"behavioural response to odour","type":"exact"},{"name":"behavioural response to scent","type":"exact"},{"name":"behavioural response to smell","type":"exact"},{"name":"olfactory behaviour","type":"exact"}],"termid":"GO:0042048"}


id: GO:0102435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myricetin + S-adenosyl-L-methionine = 7-O-methylmyricetin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"myricetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13910"],"termid":"GO:0102435"}


id: MONDO:1010224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign prostatic hyperplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign prostatic hyperplasia, non-human animal","secondary_identifiers":["OMIA:002355"],"termid":"MONDO:1010224","xrefs":{"Monarch":{"xref_id":"1010224"}}}


id: PBO:0081055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 12","termid":"PBO:0081055"}


id: PBO:0073287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 8","termid":"PBO:0073287"}


id: PBO:0052698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 6","termid":"PBO:0052698"}


id: MOD:00349
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form 4-amino-3-isothiazolidinone-L-serine.","definition_xrefs":["PubMed:12802338","PubMed:12802339","RESID:AA0344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"4-amino-3-isothiazolidinone-L-serine","synonyms":[{"name":"(2S)-2-[(4R)-4-amino-3-oxo-1,2-thiazolidin-2-yl]-3-hydroxypropanoic acid","type":"exact"},{"name":"2-(4-amino-3-oxo-isothiazolidin-2-yl)-3-hydroxy-propanoic acid","type":"exact"},{"name":"4-amino-3-isothiazolidinone-L-serine","type":"exact"},{"name":"CROSSLNK N,N-(cysteine-1,S-diyl)serine (Cys-Ser)","type":"exact"},{"name":"N,N-(L-cysteine-1,S-diyl)-L-serine","type":"exact"},{"name":"serine-cysteine sulfenyl amide cross-link","type":"exact"},{"name":"serine-cysteine sulphenyl amide cross-link","type":"exact"}],"termid":"MOD:00349"}


id: GO:0032630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-26 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-26 production","secondary_identifiers":["GO:0072624","GO:0045526"],"synonyms":[{"name":"AK155 secretion","type":"narrow"},{"name":"IL-26 production","type":"exact"},{"name":"interleukin-26 anabolism","type":"narrow"},{"name":"interleukin-26 biosynthesis","type":"narrow"},{"name":"interleukin-26 biosynthetic process","type":"narrow"},{"name":"interleukin-26 formation","type":"narrow"},{"name":"interleukin-26 secretion","type":"narrow"},{"name":"interleukin-26 synthesis","type":"narrow"}],"termid":"GO:0032630"}


id: PBO:0049429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 6","termid":"PBO:0049429"}


id: FYPO:0008372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is normal (i.e. indistinguishable from wild-type.","definition_xrefs":["PomBase:pb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cell surface during vegetative growth","termid":"FYPO:0008372"}


id: GO:1903740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["GOC:rn","GO_REF:0000059","GOC:TermGenie","PMID:25359770"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidate phosphatase activity (obsolete GO:1903740)","synonyms":[{"name":"activation of 3-sn-phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of acid phosphatidyl phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphatase activity","type":"narrow"},{"name":"activation of phosphatic acid phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidate phosphatase activity","type":"narrow"},{"name":"activation of phosphatidate phosphohydrolase activity","type":"narrow"},{"name":"activation of phosphatidic acid phosphatase activity","type":"narrow"},{"name":"positive regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"positive regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"up-regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphatase activity","type":"exact"},{"name":"up-regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of phosphatidic acid phosphatase activity","type":"exact"},{"name":"upregulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"upregulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphatase activity","type":"exact"},{"name":"upregulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"upregulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903740"}


id: SO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a variant from the genomic sequence is commonly found in the general population.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_frequency","termid":"SO:0001763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"common_variant","synonyms":[{"name":"common variant","type":"exact"}],"termid":"SO:0001767"}


id: MONDO:0003548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast carcinoma characterized by the presence of tubular and glandular neoplastic cell structures, admixed with islands of neoplastic cells showing squamous differentiation.","definition_xrefs":["NCIT:C40361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell breast carcinoma","termid":"MONDO:0006056"},{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenosquamous breast carcinoma","secondary_identifiers":["MEDGEN:267645","ONCOTREE:MASC","UMLS:C1510796","DOID:5623"],"synonyms":[{"name":"adenosquamous breast carcinoma","type":"exact"},{"name":"breast adenosquamous carcinoma","type":"exact"},{"name":"metaplastic adenosquamous carcinoma","type":"related"}],"termid":"MONDO:0003548","xrefs":{"Monarch":{"xref_id":"0003548"}}}


id: PBO:0065302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 12","termid":"PBO:0065302"}


id: MONDO:0015306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lemierre syndrome is a rare, potentially lethal, oropharyngeal infectious disease occurring in immunocompetent adolescents and young adults that is mainly due to Fusobacterium necrophorum and that is characterized by septic thrombophlebitis of the internal jugular vein that leads to septic, usually pulmonary, embolism, associated with ENT (ear, nose, and throat) infection that manifests with fever, neck pain, and tonsillopharyngitis.","definition_xrefs":["Orphanet:137839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"bacterial infectious disease with sepsis","termid":"MONDO:0005229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lemierre syndrome","secondary_identifiers":["GARD:6882","UMLS:C0027537","MEDGEN:6541","MedDRA:10065552","MESH:D057831","DOID:11337","ICD9:040.3","SCTID:52542005"],"synonyms":[{"name":"Lemierre postanginal sepsis","type":"exact"},{"name":"Lemierre syndrome","type":"exact"},{"name":"Lemierre's syndrome","type":"related"},{"name":"acute sore throat","type":"related"},{"name":"human necrobacillosis","type":"exact"},{"name":"necrobacillosis","type":"related"},{"name":"oropharyngeal infection leading to secondary septic thrombophlebitis of the internal jugular vein","type":"related"},{"name":"postanginal sepsis","type":"exact"},{"name":"postanginal sepsis secondary to orophyngeal infection","type":"exact"},{"name":"septic phlebitis of the internal jugular vein","type":"exact"}],"termid":"MONDO:0015306","xrefs":{"Monarch":{"xref_id":"0015306"}}}


id: PBO:0068345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 121","termid":"PBO:0068345"}


id: PBO:0087368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific protein with a leucine zipper motif; subunit of the MIS complex which controls mRNA methylation during during the induction of sporulation","termid":"PBO:0087368"}


id: MONDO:0100551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder related to biallelic variants in AFG2B and characterized by a spectrum of intellectual disability, hearing loss, and motor features including spasticity, dystonia, and/or hypotonia. Other phenotypic features commonly reported with the neurodevelopmental presentation include spasticity, focal or generalized epilepsy, and microcephaly.","direct_ancestors":[{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"AFG2B-related complex neurodevelopmental disorder with motor features and hearing loss","synonyms":[{"name":"AFG2B-related complex neurodevelopmental disorder with motor features and hearing loss","type":"exact"},{"name":"SPATA5L1-related complex neurodevelopmental disorder with motor features and hearing loss","type":"exact"}],"termid":"MONDO:0100551","xrefs":{"Monarch":{"xref_id":"0100551"}}}


id: FYPO:0005455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere assembly occurs at one or more chromosome ends generated by a double-strand break.","definition_xrefs":["PMID:17724078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere assembly","termid":"FYPO:0005454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"telomere assembly at double-strand break site","synonyms":[{"name":"de novo telomere addition at double-strand break site","type":"exact"},{"name":"telomere assembly at double-strand break site during mitotic cell cycle","type":"related"},{"name":"telomere assembly at double-strand break site during vegetative growth","type":"exact"},{"name":"telomere formation at double-strand break site","type":"exact"}],"termid":"FYPO:0005455"}


id: MONDO:0015005
data:
  {"annotated_genes":["SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86791],"is_not":false,"summary":null,"term":"MONDO:0015005"}]},"cv_name":"mondo","definition":"A pyridoxine-dependent epilepsy that has material basis in homozygous or compound heterozygous mutation in the PLPBP gene on chromosome 8p11.23.","definition_xrefs":["DOID:0080769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine-dependent epilepsy","termid":"MONDO:0009945"},{"relation_name":"is_a","term_name":"epilepsy, early-onset","termid":"MONDO:0957599"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0005066"],"is_obsolete":false,"name":"epilepsy, early-onset, vitamin B6-dependent","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934599","OMIM:617290","UMLS:C4310632"],"synonyms":[{"name":"EPVB6D","type":"exact"},{"name":"epilepsy, early-onset, vitamin B6-dependent","type":"exact"},{"name":"epilepsy, early-onset, vitamin B6-dependent; EPVB6D","type":"exact"}],"termid":"MONDO:0015005","terms_by_termid":{"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0015005"}}}


id: PBO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_endoplasmic_reticulum_stress","termid":"PBO:0035790"}


id: GO:0055035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer membrane of any thylakoid within a plastid.","definition_xrefs":["GOC:jid","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"is_a","term_name":"thylakoid membrane","termid":"GO:0042651"},{"relation_name":"part_of","term_name":"plastid thylakoid","termid":"GO:0031976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid thylakoid membrane","termid":"GO:0055035"}


id: PBO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid dehydrogenase (predicted)","termid":"PBO:0001643"}


id: PBO:0075324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 2 pseudogene 1","termid":"PBO:0075324"}


id: MONDO:1011210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GAPO syndrome that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GAPO syndrome, non-human animal","termid":"MONDO:1010318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAPO syndrome, pig","secondary_identifiers":["OMIA:002544-9823"],"termid":"MONDO:1011210","xrefs":{"Monarch":{"xref_id":"1011210"}}}


id: GO:0051700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fructosyl-amino acid + O2 = corresponding amino acid + glucosone + H2O2.","definition_xrefs":["PMID:16233628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"fructosyl-amino acid oxidase activity","synonyms":[{"name":"FAOD activity","type":"exact"}],"termid":"GO:0051700"}


id: PBO:0088751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family ubiquinone biosynthesis ATPase Coq8","termid":"PBO:0088751"}


id: GO:0070834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with two N-methylations with phospho-base phosphoethanolamine and phospho-N-methylethanolamine, followed by a downstream N-methylation on phosphatidyl-base phosphatidyl-N-dimethylethanolamine; the process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via N-dimethylethanolamine phosphate and CDP-N-dimethylethanolamine","termid":"GO:0070834"}


id: PBO:0089123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt5","termid":"PBO:0089123"}


id: PBO:0053096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3D","termid":"PBO:0053096"}


id: MONDO:0022824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital craniosynostosis maternal hyperthyroiditis","termid":"MONDO:0022824","xrefs":{"Monarch":{"xref_id":"0022824"}}}


id: PR:P36600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cgs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase regulatory subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.03","synonyms":[{"name":"PKA regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cgs1","type":"exact"}],"termid":"PR:P36600"}


id: MONDO:0003365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the esophagus. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagus sarcoma","termid":"MONDO:0001204"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophagus leiomyosarcoma","secondary_identifiers":["DOID:5276","NCIT:C5334","MEDGEN:272589","UMLS:C1333454"],"synonyms":[{"name":"esophageal leiomyosarcoma","type":"exact"},{"name":"esophagus leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of esophagus","type":"exact"},{"name":"leiomyosarcoma of oesophagus","type":"exact"},{"name":"leiomyosarcoma of the esophagus","type":"exact"},{"name":"leiomyosarcoma of the oesophagus","type":"exact"}],"termid":"MONDO:0003365","xrefs":{"Monarch":{"xref_id":"0003365"}}}


id: PBO:0058683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6811","termid":"PBO:0058683"}


id: PBO:0017975
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human SKB1","termid":"PBO:0017975"}


id: PBO:0052981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactamase beta like 1","termid":"PBO:0052981"}


id: PBO:0043435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connector enhancer of kinase suppressor of Ras 1","termid":"PBO:0043435"}


id: MONDO:0001751
data:
  {"annotated_genes":["SJAG_03363","SJAG_00938","SJAG_03011","SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[86807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[86745,86744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[85649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[86683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"Impairment of the bile flow caused by obstruction within the liver, or outside the liver in the bile duct system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"cholestasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:925","UMLS:C0008370","SCTID:30144000","MESH:D002779","DOID:13580","ICD9:576.2"],"synonyms":[{"name":"bile occlusion","type":"exact"},{"name":"obstruction of bile duct","type":"exact"}],"termid":"MONDO:0001751","terms_by_termid":{"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013995":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0001751"}}}


id: PBO:0048336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 47","termid":"PBO:0048336"}


id: GO:0090409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonate + ATP + coenzyme A = malonyl-CoA + AMP + diphosphate.","definition_xrefs":["RHEA:32139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"malonyl-CoA synthetase activity","secondary_identifiers":["MetaCyc:RXN-12359","EC:6.2.1.76"],"termid":"GO:0090409"}


id: PBO:0086466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial aconitase isozyme; similarity to Aco1p, an aconitase required for the TCA cycle; expression induced during growth on glucose, by amino acid starvation via Gcn4p, and repressed on ethanol","termid":"PBO:0086466"}


id: PBO:0051830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 5","termid":"PBO:0051830"}


id: GO:1903554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that is involved in the defense response to Gram-negative bacterium.","definition_xrefs":["GOC:TermGenie","PMID:25303524","GO_REF:0000060","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"defense response to Gram-negative bacterium","termid":"GO:0050829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in defense response to Gram-negative bacterium","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G protein coupled receptor protein signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor protein signal transduction involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein coupled receptor signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signaling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"GPCR signaling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signaling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signaling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signaling pathway involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signalling pathway involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"GPCR signalling pathway involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signalling pathway involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"GPCR signalling pathway involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"GPCR signalling pathway involved in defense response to Gram-negative bacterium","type":"exact"}],"termid":"GO:1903554"}


id: MOD:01418
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to a methylated threonine, such as O-methyl-L-threonine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated threonine","synonyms":[{"name":"MeThr","type":"exact"}],"termid":"MOD:01418"}


id: GO:0035698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a CD8-positive, alpha-beta cytotoxic T cell from the blood vessels into the surrounding tissue.","definition_xrefs":["GOC:BHF","CL:0000794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:0035698"}


id: GO:0050914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a salty taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of salty taste","synonyms":[{"name":"salty taste perception","type":"exact"}],"termid":"GO:0050914"}


id: PBO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDR subfamily","termid":"PBO:0001766"}


id: GO:0006162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete purine/pyrimidine nucleoside diphosphate reduction (obsolete GO:0006162)","synonyms":[{"name":"purine/pyrimidine nucleoside diphosphate reduction","type":"exact"}],"termid":"GO:0006162"}


id: MONDO:0001529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A finding of low numbers of red and white blood cells and platelets in the peripheral blood.","definition_xrefs":["NCIT:C34889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"pancytopenia","secondary_identifiers":["UMLS:C0030312","DOID:12450","SCTID:127034005","MESH:D010198","ICD9:284.1","ICD9:284.89","MEDGEN:18281"],"termid":"MONDO:0001529","xrefs":{"Monarch":{"xref_id":"0001529"}}}


id: GO:1990912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a microwave radiation stimulus.","definition_xrefs":["PMID:21241601"],"gene_count":0,"genotype_count":0,"name":"obsolete response to microwave radiation (obsolete GO:1990912)","termid":"GO:1990912"}


id: PBO:0043224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 3, pseudogene","termid":"PBO:0043224"}


id: PBO:0063738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 3","termid":"PBO:0063738"}


id: PBO:0078954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 5-1","termid":"PBO:0078954"}


id: GO:0080092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pollen tube growth.","definition_xrefs":["PMID:19208902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"pollen tube growth","termid":"GO:0009860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pollen tube growth","termid":"GO:0080092"}


id: PR:O74745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- anp1 gene.","definition_xrefs":["UniProtKB:O74745","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan polymerase II complex anp1 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.04","synonyms":[{"name":"M-Pol II subunit anp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-anp1","type":"exact"}],"termid":"PR:O74745"}


id: PBO:0001183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug99","termid":"PBO:0001183"}


id: MONDO:0044874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common subtype of the myelodysplastic syndromes affecting children. It is characterized by persistent cytopenia with less than 5% blasts in the bone marrow and less than 2% blasts in the peripheral blood.","definition_xrefs":["NCIT:C82596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractory hematologic cancer","termid":"MONDO:0004111"},{"relation_name":"is_a","term_name":"childhood myelodysplastic syndrome","termid":"MONDO:0044873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"refractory cytopenia of childhood","secondary_identifiers":["ONCOTREE:RCYC","icd11.foundation:699075426","MEDGEN:417430","UMLS:C2826323"],"synonyms":[{"name":"RCC","type":"exact"},{"name":"refractory cytopenia of childhood","type":"exact"}],"termid":"MONDO:0044874","xrefs":{"Monarch":{"xref_id":"0044874"}}}


id: PBO:0017579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate/ 5'-adenylyl sulfate transmembrane transporter (predicted)","termid":"PBO:0017579"}


id: GO:1990513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex which interacts with E-box regulatory elements in target genes, including Period (Per1, Per2, Per3) and Cryptochrome (Cry1, Cry2), to activate their transcription during the daytime. The CRY-PER complexes inhibit CLOCK-BMAL1-driven transcription in a negative feedback loop to generate circadian rhythms.","definition_xrefs":["GOC:bhm","PMID:23229515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CLOCK-BMAL transcription complex","synonyms":[{"name":"CLOCK/BMAL complex","type":"exact"}],"termid":"GO:1990513"}


id: GO:1903863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a P granule.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000079","PMID:25535836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule organization","termid":"GO:0030719"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"P granule assembly","synonyms":[{"name":"P granule formation","type":"exact"},{"name":"germline granule assembly","type":"exact"},{"name":"germline granule formation","type":"exact"},{"name":"polar granule assembly","type":"exact"},{"name":"polar granule formation","type":"exact"}],"termid":"GO:1903863"}


id: GO:0035236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neuropeptide proctolin, to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"proctolin receptor activity","termid":"GO:0035236"}


id: MONDO:0023243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The Glass-Chapman-Hockley syndrome is a very rare disease. To date, the syndrome has only been reported in one family with five members affected in three generations. The first patients were two brothers that had an abnormally-shaped head due to coronal craniosynostosis. Their mother, maternal aunt, and maternal grandmother were also found to have the syndrome. The signs and symptoms varied from person to person; however, the signs and symptoms included coronal craniosynostosis, small middle part of the face (midfacial hypoplasia), and short fingers (brachydactyly).The inheritance is thought to be autosomal dominant. No genes have been identified for this syndrome. Treatment included surgery to correct the craniosynostosis. No issues with development and normal intelligence were reported. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["GARD:0002479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"glass-chapman-hockley syndrome","secondary_identifiers":["Orphanet:1535","SCTID:720814001"],"synonyms":[{"name":"craniosynostosis - dysmorphism - brachydactyly","type":"related"},{"name":"craniosynostosis brachydactyly","type":"related"},{"name":"craniosynostosis with facial dysmorphism and brachydactyly syndrome","type":"exact"},{"name":"craniosynostosis-dysmorphism-brachydactyly syndrome","type":"related"},{"name":"glass chapman hockley syndrome","type":"related"}],"termid":"MONDO:0023243","xrefs":{"Monarch":{"xref_id":"0023243"}}}


id: MONDO:0029042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ureteropelvic junction obstruction (obsolete MONDO:0029042)","secondary_identifiers":["DOID:0111145"],"termid":"MONDO:0029042","xrefs":{"Monarch":{"xref_id":"0029042"}}}


id: PBO:0000359
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense transcript detected","termid":"PBO:0000359"}


id: PBO:0070410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A3","termid":"PBO:0070410"}


id: PBO:0069472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 739, pseudogene","termid":"PBO:0069472"}


id: GO:0015010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrocorphins, tetrapyrroles that combine the structural elements of both porphyrins and corrins.","definition_xrefs":["Wikipedia:Morphine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel-tetrapyrrole coenzyme metabolic process","termid":"GO:0015011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"tetrahydrocorphin metabolic process","synonyms":[{"name":"tetrahydrocorphin metabolism","type":"exact"}],"termid":"GO:0015010"}


id: SO:1000056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The DNA mutation affects the amino acid coding sequence of a gene; this region includes both the initiator and terminator codons.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000056 sequence_variant_causing_amino_acid_coding_codon_change_in_transcript (obsolete SO:1000056)","synonyms":[{"name":"mutaton causing amino acid coding codon change in transcript","type":"related"},{"name":"sequence variant causing amino acid coding codon change in transcript","type":"exact"}],"termid":"SO:1000056"}


id: PBO:0043855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRACD like","termid":"PBO:0043855"}


id: MONDO:0015511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic urogenital disease (obsolete MONDO:0015511)","secondary_identifiers":["Orphanet:156619"],"termid":"MONDO:0015511","xrefs":{"Monarch":{"xref_id":"0015511"}}}


id: PBO:0078341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 7-1","termid":"PBO:0078341"}


id: PBO:0073888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 5","termid":"PBO:0073888"}


id: GO:0070476
data:
  {"annotated_genes":["SJAG_02281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79774],"is_not":false,"summary":null,"term":"GO:0070476"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to the N7 atom in the base portion of a guanine nucleotide residue in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA (guanine-N7)-methylation","termid":"GO:0036265"},{"relation_name":"is_a","term_name":"rRNA base methylation","termid":"GO:0070475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02281":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"rRNA (guanine-N7)-methylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070476","terms_by_termid":{"GO:0070476":null}}


id: GO:0034473
data:
  {"annotated_genes":["SJAG_04084","SJAG_04818","SJAG_04824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71013,71377,72181],"is_not":false,"summary":null,"term":"GO:0034473"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a U1 snRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 3'-end processing","termid":"GO:0034472"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04084":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016073"],"is_obsolete":false,"name":"U1 snRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"U1 snRNA 3' end processing","type":"exact"}],"termid":"GO:0034473","terms_by_termid":{"GO:0034473":null}}


id: GO:0140750
data:
  {"annotated_genes":["SJAG_05313","SJAG_04755","SJAG_01938","SJAG_03982","SJAG_02698","SJAG_01878"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70092,71943,72622,73214,79904,113046],"is_not":false,"summary":null,"term":"GO:0140750"}]},"cv_name":"molecular_function","definition":"A histone octamer slider activity that spaces nucleosomes along chromosomal DNA. This activity is involved in assembling chromatin in uniform nucleosome arrays to regulate transcription by RNA polymerases I, II, and III, as well as DNA replication, recombination and repair.","definition_xrefs":["PMID:16468993","PMID:11683384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone octamer slider activity","termid":"GO:0140751"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01878":null,"SJAG_01938":null,"SJAG_02698":null,"SJAG_03982":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nucleosome array spacer activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleosome array spacing activity","type":"exact"}],"termid":"GO:0140750","terms_by_termid":{"GO:0140750":null}}


id: PBO:0057905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3606","termid":"PBO:0057905"}


id: PBO:0073738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 5","termid":"PBO:0073738"}


id: MONDO:1010334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinitis pigmentosa that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa, non-human animal","secondary_identifiers":["OMIA:001413"],"termid":"MONDO:1010334","xrefs":{"Monarch":{"xref_id":"1010334"}}}


id: PBO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore_during_meiosis_I","termid":"PBO:0034493"}


id: PBO:0075587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 14 (putative)","termid":"PBO:0075587"}


id: GO:0047665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminolevulinate + pyruvate = 4,5-dioxopentanoate + L-alanine.","definition_xrefs":["RHEA:12480","EC:2.6.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"aminolevulinate transaminase activity","secondary_identifiers":["MetaCyc:AMINOLEVULINATE-AMINOTRANSFERASE-RXN","KEGG_REACTION:R02271"],"synonyms":[{"name":"4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"4,5-dioxovaleric acid aminotransferase activity","type":"related"},{"name":"4,5-dioxovaleric acid transaminase activity","type":"related"},{"name":"4,5-dioxovaleric transaminase activity","type":"related"},{"name":"5-aminolevulinate:pyruvate aminotransferase activity","type":"related"},{"name":"5-aminolevulinic acid transaminase activity","type":"related"},{"name":"DOVA transaminase activity","type":"related"},{"name":"L-alanine-4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"L-alanine:4,5-dioxovaleric acid transaminase activity","type":"related"},{"name":"L-alanine:dioxovalerate transaminase activity","type":"related"},{"name":"alanine-dioxovalerate aminotransferase activity","type":"related"},{"name":"alanine-gamma,delta-dioxovalerate aminotransferase activity","type":"related"},{"name":"alanine:4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"aminolevulinate aminotransferase activity","type":"exact"},{"name":"aminolevulinic acid transaminase activity","type":"related"},{"name":"dioxovalerate transaminase activity","type":"related"},{"name":"gamma,delta-dioxovalerate aminotransferase activity","type":"related"},{"name":"gamma,delta-dioxovaleric acid transaminase activity","type":"related"}],"termid":"GO:0047665"}


id: PBO:0053149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 5","termid":"PBO:0053149"}


id: GO:0051954
data:
  {"annotated_genes":["SJAG_05346","SJAG_03591","SJAG_02605","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98637,91505,93099,110289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[93100,98638,91506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[93101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"positively_regulates","term_name":"amine transport","termid":"GO:0015837"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of amine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of amine transport","type":"narrow"},{"name":"stimulation of amine transport","type":"narrow"},{"name":"up regulation of amine transport","type":"exact"},{"name":"up-regulation of amine transport","type":"exact"},{"name":"upregulation of amine transport","type":"exact"}],"termid":"GO:0051954","terms_by_termid":{"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: PBO:0086976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA); PKA is a component of a signaling pathway that controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation","termid":"PBO:0086976"}


id: SO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by DNA methylation.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_DNA_methylation","termid":"SO:0000895"},{"relation_name":"is_a","term_name":"gene_silenced_by_DNA_modification","termid":"SO:0000128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_DNA_methylation","synonyms":[{"name":"gene silenced by DNA methylation","type":"exact"},{"name":"methylation-silenced gene","type":"exact"}],"termid":"SO:0000129"}


id: MONDO:1012183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"subacute progressive myopathy, non-human animal","termid":"MONDO:1011792"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute progressive myopathy, dog","secondary_identifiers":["OMIA:000696-9615"],"termid":"MONDO:1012183","xrefs":{"Monarch":{"xref_id":"1012183"}}}


id: GO:0072402
data:
  {"annotated_genes":["SJAG_04183","SJAG_04332","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[102144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[102145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[102146,94305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of DNA integrity checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA integrity checkpoint effector process","type":"exact"},{"name":"response to signal involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:0072402","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:1990820":null}}


id: MONDO:0015179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intestinal disease due to vitamin absorption anomaly (obsolete MONDO:0015179)","secondary_identifiers":["Orphanet:104004"],"termid":"MONDO:0015179","xrefs":{"Monarch":{"xref_id":"0015179"}}}


id: MONDO:0019618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon cause of hypopituitarism seen after severe postpartum hemorrhaging. Prolonged hypovolemia leads to ischemic necrosis of the pituitary. Clinical signs typically present in the puerperium and include failure to begin lactation, fatigue, hypotension and eventual amenorrhea. Clinical course is usually mild, however extreme cases may progress to adrenal failure. Prognosis is most favorable when hormone replacement is initiated soon after symptom onset.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sheehan syndrome","secondary_identifiers":["ICD10CM:E23.0","MedDRA:10036297","MEDGEN:116569","NCIT:C35300","GARD:7630","Orphanet:91355","SCTID:290653008","SCTID:32390006","MESH:D007018","DOID:9476","UMLS:C0242342","icd11.foundation:421687193"],"synonyms":[{"name":"Sheehan's syndrome","type":"exact"},{"name":"postpartum hypopituitarism","type":"exact"},{"name":"postpartum panhypopituitarism","type":"related"},{"name":"postpartum panhypopituitary syndrome","type":"related"},{"name":"postpartum pituitary necrosis","type":"related"}],"termid":"MONDO:0019618","xrefs":{"Monarch":{"xref_id":"0019618"}}}


id: GO:0102753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + chlorophyllide b(1-) + 2-trans,6-trans,10-trans-geranylgeranyl diphosphate = geranylgeranyl-chlorophyll b + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorophyllide b:geranyl-geranyl diphosphate geranyl-geranyltransferase activity (obsolete GO:0102753)","termid":"GO:0102753"}


id: PBO:0087693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins; similar to and partially functionally redundant with Ost3p","termid":"PBO:0087693"}


id: GO:0051801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The killing by an organism of a cell in a second organism by means of the rupture of cell membranes and the loss of cytoplasm, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051801)","synonyms":[{"name":"cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0051801"}


id: PATO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being permeated or pervaded by a liquid (as by osmosis or diffusion).","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"permeability","termid":"PATO:0000970"}


id: GO:0120103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which assembles on the mother centriole during cilium formation, adjacent and proximal to a centriolar distal appendage. In human, it contains ODF2, CNTRL, NIN, CCDC120c and CCDC68.","definition_xrefs":["PMID:28422092","GOC:cilia","PMID:23213374","PMID:27818179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"centriolar subdistal appendage","synonyms":[{"name":"subdistal appendage of basal body","type":"exact"},{"name":"subdistal appendage of centriole","type":"exact"},{"name":"subdistal appendage of mother centriole","type":"exact"}],"termid":"GO:0120103"}


id: GO:0071109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior temporal gyrus over time, from its formation to the mature structure. The superior temporal gyrus is a portion of the cerebral cortex that extends from the lateral sulcus to the superior temporal sulcus.","definition_xrefs":["PMID:11484000","GOC:BHF","FMA:61905","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior temporal gyrus development","termid":"GO:0071109"}


id: MONDO:0008992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juberg-Hayward syndrome is a polymalformative syndrome that associates multiple skeletal anomalies with microcephaly, facial dysmorphism, urogenital anomalies and intellectual deficit.","definition_xrefs":["Orphanet:2319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Juberg-Hayward syndrome","secondary_identifiers":["GARD:3060","NORD:1531","SCTID:721874001","OMIM:216100","MEDGEN:162906","UMLS:C0796099","icd11.foundation:395922030","MESH:C537690"],"synonyms":[{"name":"JHS","type":"related"},{"name":"Juberg-Hayward syndrome","type":"exact"},{"name":"Orocraniodigital Syndrome","type":"exact"},{"name":"Orocraniodigital syndrome","type":"exact"},{"name":"cleft LIP/palate with abnormal thumbs and microcephaly","type":"related"},{"name":"cleft lip/palate-abnormal thumbs-microcephaly syndrome","type":"exact"}],"termid":"MONDO:0008992","xrefs":{"Monarch":{"xref_id":"0008992"}}}


id: GO:0140420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a heme from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transport","termid":"GO:0015886"},{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0098771"],"is_obsolete":false,"name":"heme import into cell","synonyms":[{"name":"heme assimilation","type":"broad"}],"termid":"GO:0140420"}


id: PR:O13954
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H4.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H4.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.13c","synonyms":[{"name":"Spom972h-SPAC23H4.13c","type":"exact"}],"termid":"PR:O13954"}


id: PBO:0068080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 386","termid":"PBO:0068080"}


id: SO:0000798
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"TE that has been modified by manipulations in vitro.","definition_xrefs":["FB:mc"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_transposable_element","synonyms":[{"name":"engineered transposable element","type":"exact"}],"termid":"SO:0000798"}


id: GO:1901642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nucleoside across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nucleoside transmembrane transport","synonyms":[{"name":"nucleoside membrane transport","type":"exact"}],"termid":"GO:1901642"}


id: GO:0046707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving IDP, inosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"IDP metabolic process","synonyms":[{"name":"IDP metabolism","type":"exact"}],"termid":"GO:0046707"}


id: PBO:0091335
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae PPZ1","termid":"PBO:0091335"}


id: RO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of parasitoid of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_parasitoid","termid":"RO:0002209"}


id: PBO:0067505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 645, pseudogene","termid":"PBO:0067505"}


id: PBO:0078066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 56","termid":"PBO:0078066"}


id: MOD:01776
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-methylthiocarbonylaminoethylcysteine.","definition_xrefs":["PubMed:18688235","PubMed:20608637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-methylthiocarbonylaminoethylcysteine (Cys)","synonyms":[{"name":"(2R)-2-amino-3-([2-([(methylsulfanyl)carbonyl]amino)ethyl]sulfanyl)propanoic acid","type":"exact"},{"name":"L-cysteine N-(methylthiocarbonyl)aziridine adduct","type":"exact"},{"name":"MTCTK","type":"exact"},{"name":"N6-methylthiocarbonyl-4-thialysine","type":"exact"},{"name":"S-[2-([(methylthio)carbonyl]amino)ethyl]-L-cysteine","type":"exact"}],"termid":"MOD:01776"}


id: PBO:0111842
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab subfamily","termid":"PBO:0111842"}


id: PBO:0055161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2580","termid":"PBO:0055161"}


id: PBO:0016877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uniprot_identifier","termid":"PBO:0016877"}


id: PBO:0069990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1285, pseudogene","termid":"PBO:0069990"}


id: PBO:0035808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_multiseptate_vegetative_cell","termid":"PBO:0035808"}


id: PBO:0090664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF, N-terminal (4F5-like)","termid":"PBO:0090664"}


id: FYPO:0001443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription does not occur. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"},{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"abolished transcription during vegetative growth","synonyms":[{"name":"abolished transcription during mitotic cell cycle","type":"related"},{"name":"transcription abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001443"}


id: MOD:00614
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a fucose (6-deoxy-D-galactose) group through a glycosidic bond.","definition_xrefs":["PubMed:15189151","PubMed:11344537","Unimod:295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyhexosylated","termid":"MOD:00736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"fucosylated","synonyms":[{"name":"Fuc","type":"exact"},{"name":"Fucose","type":"related"},{"name":"dHex","type":"related"}],"termid":"MOD:00614"}


id: MONDO:1011481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beta-mannosidosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, cattle","termid":"MONDO:1010862"},{"relation_name":"is_a","term_name":"beta-mannosidosis, non-human animal","termid":"MONDO:1011432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-mannosidosis, cattle","secondary_identifiers":["OMIA:000626-9913"],"termid":"MONDO:1011481","xrefs":{"Monarch":{"xref_id":"1011481"}}}


id: GO:0006553
data:
  {"annotated_genes":["SJAG_01630","SJAG_01061","SJAG_01955","SJAG_00869","SJAG_00502","SJAG_04688","SJAG_03312","SJAG_02388","SJAG_01574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96115,64732,69835,64118,76367,75848,113194,77275,74926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving lysine, 2,6-diaminohexanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00502":null,"SJAG_00869":null,"SJAG_01061":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01955":null,"SJAG_02388":null,"SJAG_03312":null,"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lysine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Lysine"],"synonyms":[{"name":"lysine metabolism","type":"exact"}],"termid":"GO:0006553","terms_by_termid":{"GO:0019878":null}}


id: MONDO:0017482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humeral agenesis/hypoplasia","termid":"MONDO:0017440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"humeral agenesis/hypoplasia, unilateral","secondary_identifiers":["Orphanet:295061"],"synonyms":[{"name":"humeral intercalary meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017482","xrefs":{"Monarch":{"xref_id":"0017482"}}}


id: PBO:0046018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2AK3 divergent transcript","termid":"PBO:0046018"}


id: PBO:0072703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUVBL2 pseudogene 1","termid":"PBO:0072703"}


id: MONDO:0002504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete grade III astrocytoma (obsolete MONDO:0002504)","termid":"MONDO:0002504","xrefs":{"Monarch":{"xref_id":"0002504"}}}


id: GO:0071868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monoamine stimulus. A monoamine is any of a group of molecular messengers that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monoamine","termid":"GO:0071867"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to monoamine stimulus","termid":"GO:0071868"}


id: GO:0045566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 1.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor 1 biosynthetic process (obsolete GO:0045566)","synonyms":[{"name":"activation of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor 1 anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 formation","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor 1 biosynthetic process","type":"exact"}],"termid":"GO:0045566"}


id: PBO:0005076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Pex1 (predicted)","termid":"PBO:0005076"}


id: GO:0097274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of urea.","definition_xrefs":["GOC:yaf","PMID:12695560"],"gene_count":0,"genotype_count":0,"name":"obsolete urea homeostasis (obsolete GO:0097274)","termid":"GO:0097274"}


id: PR:Q9HGN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SET that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein C36B7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.08c","secondary_identifiers":["UniProtKB:Q9HGN2"],"synonyms":[{"name":"Spom972h-SET","type":"exact"}],"termid":"PR:Q9HGN2"}


id: MONDO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aniridia (obsolete MONDO:0001477)","termid":"MONDO:0001477","xrefs":{"Monarch":{"xref_id":"0001477"}}}


id: MONDO:0014657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the RSPH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 32","secondary_identifiers":["MEDGEN:896106","OMIM:616481","GARD:16122","UMLS:C4225311","DOID:0110603"],"synonyms":[{"name":"CILD32","type":"exact"},{"name":"RSPH3 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 32","type":"related"},{"name":"ciliary dyskinesia, primary, 32, without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 32","type":"exact"},{"name":"primary ciliary dyskinesia 32 without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in RSPH3","type":"exact"},{"name":"primary ciliary dyskinesia type 32","type":"exact"}],"termid":"MONDO:0014657","xrefs":{"Monarch":{"xref_id":"0014657"}}}


id: PBO:0027084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase_B","termid":"PBO:0027084"}


id: PBO:0061144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 family member 7","termid":"PBO:0061144"}


id: MONDO:0957920
data:
  {"annotated_genes":["SJAG_04100"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86026],"is_not":false,"summary":null,"term":"MONDO:0957920"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 113 with autoimmunity and autoinflammation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1851770","OMIM:620565","UMLS:C5882711"],"termid":"MONDO:0957920","terms_by_termid":{"MONDO:0957920":null},"xrefs":{"Monarch":{"xref_id":"0957920"}}}


id: GO:0008674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-2-dehydro-3-deoxy-D-galactonate = D-glyceraldehyde 3-phosphate + pyruvate.","definition_xrefs":["EC:4.1.2.21","RHEA:24464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity","secondary_identifiers":["MetaCyc:DEHYDDEOXPHOSGALACT-ALDOL-RXN","KEGG_REACTION:R01064"],"synonyms":[{"name":"(KDPGal)aldolase activity","type":"related"},{"name":"2-dehydro-3-deoxy-D-galactonate-6-phosphate D-glyceraldehyde-3-phosphate-lyase (pyruvate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-D-galactonate-6-phosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"2-dehydro-3-deoxyphosphogalactonate aldolase activity","type":"exact"},{"name":"2-keto-3-deoxy-6-phosphogalactonic acid aldolase activity","type":"related"},{"name":"2-keto-3-deoxy-6-phosphogalactonic aldolase activity","type":"related"},{"name":"2-oxo-3-deoxygalactonate 6-phosphate aldolase activity","type":"related"},{"name":"6-phospho-2-dehydro-3-deoxygalactonate aldolase activity","type":"related"},{"name":"6-phospho-2-keto-3-deoxygalactonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygalactonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygalactonic aldolase activity","type":"related"}],"termid":"GO:0008674"}


id: GO:0010891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of sequestering of triglyceride. Triglyceride sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid storage","termid":"GO:0010888"},{"relation_name":"is_a","term_name":"regulation of triglyceride storage","termid":"GO:0010889"},{"relation_name":"negatively_regulates","term_name":"triglyceride storage","termid":"GO:0030730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of triglyceride storage","synonyms":[{"name":"negative regulation of sequestering of triacylglycerol","type":"exact"},{"name":"negative regulation of sequestering of triglyceride","type":"exact"},{"name":"negative regulation of triglyceride sequestration","type":"exact"}],"termid":"GO:0010891"}


id: GO:1900370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of post-transcriptional gene silencing by RNA.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:22412382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-transcriptional gene silencing","termid":"GO:0060148"},{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900368"},{"relation_name":"positively_regulates","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of post-transcriptional gene silencing by RNA","synonyms":[{"name":"activation of RNA interference","type":"narrow"},{"name":"activation of RNAi","type":"exact"},{"name":"positive regulation of PTGS","type":"exact"},{"name":"positive regulation of RNA interference","type":"exact"},{"name":"positive regulation of RNAi","type":"exact"},{"name":"up regulation of RNA interference","type":"exact"},{"name":"up regulation of RNAi","type":"exact"},{"name":"up-regulation of RNA interference","type":"exact"},{"name":"up-regulation of RNAi","type":"exact"},{"name":"upregulation of RNA interference","type":"exact"},{"name":"upregulation of RNAi","type":"exact"}],"termid":"GO:1900370"}


id: FYPO:0001397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized to only the old end of a cell following cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar actin cortical patch localization during vegetative growth","termid":"FYPO:0001019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0004803","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"monopolar actin cortical patch localization to old end","synonyms":[{"name":"decreased actin cortical patch localization at non-growing end","type":"related"},{"name":"monopolar F-actin patch localization to old end","type":"exact"},{"name":"monopolar actin cortical patch localisation to old end","type":"exact"},{"name":"monopolar actin cortical patch localization to old end during mitotic cell cycle","type":"related"},{"name":"monopolar actin cortical patch localization to old end during vegetative growth","type":"exact"},{"name":"monopolar actin cortical patch location at old end","type":"related"},{"name":"monopolar actin patch localization to old end","type":"exact"},{"name":"reduced actin patch localization to non-growing cell end","type":"related"}],"termid":"FYPO:0001397"}


id: GO:0140590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of a defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28082413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"effector-mediated perturbation of host defenses by symbiont","termid":"GO:0140415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host defense response","synonyms":[{"name":"effector-mediated suppression of host defenses","type":"related"},{"name":"effector-mediated suppression of host defenses by symbiont","type":"exact"}],"termid":"GO:0140590"}


id: PBO:0018037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght2","termid":"PBO:0018037"}


id: GO:1903590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lysozyme activity.","definition_xrefs":["GO_REF:0000059","GOC:mr","PMID:23954697","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lysozyme activity (obsolete GO:1903590)","synonyms":[{"name":"regulation of 1,4-N-acetylmuramidase activity","type":"exact"},{"name":"regulation of L-7001","type":"related"},{"name":"regulation of N,O-diacetylmuramidase activity","type":"exact"},{"name":"regulation of PR1-lysozyme","type":"related"},{"name":"regulation of globulin G","type":"related"},{"name":"regulation of globulin G1","type":"related"},{"name":"regulation of lysozyme g","type":"related"},{"name":"regulation of mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"regulation of mucopeptide glucohydrolase activity","type":"exact"},{"name":"regulation of muramidase activity","type":"exact"},{"name":"regulation of peptidoglycan N-acetylmuramoylhydrolase activity","type":"exact"}],"termid":"GO:1903590"}


id: MONDO:0958329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Jeffries-Lakhani neurodevelopmental syndrome","secondary_identifiers":["MEDGEN:1854360","UMLS:C5935596","OMIM:620771"],"termid":"MONDO:0958329","xrefs":{"Monarch":{"xref_id":"0958329"}}}


id: MONDO:0012980
data:
  {"annotated_genes":["SJAG_02712","SJAG_03557"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85240,85241],"is_not":false,"summary":null,"term":"MONDO:0012980"}]},"cv_name":"mondo","definition":"Endocrine-cerebro-osteodysplasia (ECO) syndrome is characterized by various anomalies of the endocrine, cerebral, and skeletal systems resulting in neonatal mortality.","definition_xrefs":["Orphanet:199332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02712":null,"SJAG_03557":null},"genotype_count":0,"is_obsolete":false,"name":"endocrine-cerebro-osteodysplasia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612651","DOID:0060641","icd11.foundation:413985102","MEDGEN:390740","SCTID:723309006","UMLS:C2675227","MESH:C567210","GARD:17094"],"synonyms":[{"name":"ECO","type":"related"},{"name":"ECO syndrome","type":"exact"},{"name":"endocrine-CEREBROOSTEODYSPLASIA","type":"related"}],"termid":"MONDO:0012980","terms_by_termid":{"MONDO:0012980":null},"xrefs":{"Monarch":{"xref_id":"0012980"}}}


id: PBO:0043814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 5","termid":"PBO:0043814"}


id: SO:0001959
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-regulatory element, conserved sequence YYC+1TTTYY, and spans -2 to +6 relative to +1 TSS. It is present in most ribosomal protein genes in Drosophila and mammals but not in the yeast Saccharomyces cerevisiae. Resembles the initiator (TCAKTY in Drosophila) but functionally distinct from initiator.","definition_xrefs":["SO:myl","PMID:20801935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCT_motif","synonyms":[{"name":"TCT element","type":"exact"},{"name":"polypyrimidine initiator","type":"exact"}],"termid":"SO:0001959"}


id: FYPO:0006379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum","termid":"FYPO:0006377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum during nitrogen starvation","synonyms":[{"name":"abolished protein localisation to endoplasmic reticulum during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to ER during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum during nitrogen depletion","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum during nitrogen deprivation","type":"exact"},{"name":"protein localization to endoplasmic reticulum abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006379"}


id: GO:0140867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ADP-ribose groups to the glutamate-18 residue of histone H2B (or an equivalent residue).","definition_xrefs":["PMID:28252050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein-glutamate ADP-ribosyltransferase activity","termid":"GO:0140807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"NAD+-histone H2BE18 glutamate ADP-ribosyltransferase activity","synonyms":[{"name":"NAD+-histone H2B-E18 glutamate ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+-histone-glutamate ADP-ribosyltransferase activity (H2B-E18 specific)","type":"exact"}],"termid":"GO:0140867"}


id: MONDO:0006105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal growth of the cells of the conjunctiva without malignant characteristics.","definition_xrefs":["NCIT:C3622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival tumor","termid":"MONDO:0020204"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign conjunctival neoplasm","secondary_identifiers":["SCTID:92068002","UMLS:C0154025","EFO:1000110","MEDGEN:56328"],"synonyms":[{"name":"benign conjunctiva neoplasm","type":"exact"},{"name":"benign conjunctiva tumor","type":"exact"},{"name":"benign conjunctiva tumour","type":"exact"},{"name":"benign conjunctival neoplasm","type":"exact"},{"name":"benign conjunctival tumor","type":"exact"},{"name":"benign conjunctival tumour","type":"exact"},{"name":"benign neoplasm of conjunctiva","type":"exact"},{"name":"benign neoplasm of the conjunctiva","type":"exact"},{"name":"benign tumor of conjunctiva","type":"exact"},{"name":"benign tumor of the conjunctiva","type":"exact"},{"name":"benign tumour of conjunctiva","type":"exact"},{"name":"benign tumour of the conjunctiva","type":"exact"},{"name":"conjunctiva benign neoplasm","type":"exact"}],"termid":"MONDO:0006105","xrefs":{"Monarch":{"xref_id":"0006105"}}}


id: GO:0099047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense process that protects an organism from invading foreign RNA.","definition_xrefs":["GO:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clearance of foreign intracellular nucleic acids","termid":"GO:0099046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of foreign intracellular RNA","termid":"GO:0099047"}


id: MONDO:0013950
data:
  {"annotated_genes":["SJAG_02693"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87006],"is_not":false,"summary":null,"term":"MONDO:0013950"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX13 defect","termid":"MONDO:0100267"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0019053","MONDO:0005559","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 11B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15875","OMIM:614885","UMLS:C3554001","MEDGEN:766915","DOID:0081439"],"synonyms":[{"name":"PBD11B","type":"related"},{"name":"peroxisome biogenesis disorder 11B","type":"exact"},{"name":"peroxisome biogenesis disorder type 11B","type":"exact"}],"termid":"MONDO:0013950","terms_by_termid":{"MONDO:0013950":null},"xrefs":{"Monarch":{"xref_id":"0013950"}}}


id: FYPO:0001132
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[118986],"is_not":false,"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abolished protein localization to heterochromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abolished protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to heterochromatin during mitotic cell cycle","type":"related"},{"name":"protein localization to heterochromatin abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001132","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: PBO:0053490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 467","termid":"PBO:0053490"}


id: PBO:0077282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 25","termid":"PBO:0077282"}


id: MONDO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonspecific term referring to impaired vision. Major subcategories include stimulus deprivation-induced amblyopia and toxic amblyopia. Stimulus deprivation-induced amblyopia is a developmental disorder of the visual cortex. A discrepancy between visual information received by the visual cortex from each eye results in abnormal cortical development. strabismus and refractive errors may cause this condition. Toxic amblyopia is a disorder of the optic nerve which is associated with alcoholism, tobacco smoking, and other toxins and as an adverse effect of the use of some medications.","definition_xrefs":["MESH:D000550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amblyopia","termid":"MONDO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression amblyopia","secondary_identifiers":["UMLS:C0750903","ICD9:368.01","DOID:10375","MEDGEN:152911","SCTID:35600002"],"synonyms":[{"name":"strabismic amblyopia","type":"exact"}],"termid":"MONDO:0001019","xrefs":{"Monarch":{"xref_id":"0001019"}}}


id: PBO:0048195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABPB1 intronic transcript","termid":"PBO:0048195"}


id: FYPO:0004308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which CENP-A-containing chromatin organization is abnormal.","definition_xrefs":["PMID:9230309","GO:0061641","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal CENP-A containing chromatin organization","synonyms":[{"name":"abnormal CENP-A containing chromatin organisation","type":"exact"},{"name":"abnormal CENP-A containing chromatin organization during mitotic cell cycle","type":"related"},{"name":"abnormal CENP-A containing chromatin organization during vegetative growth","type":"exact"},{"name":"abnormal chromatin organization at centromere central core","type":"related"}],"termid":"FYPO:0004308"}


id: MOD:00597
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 277 redundant with Unimod 39. Remap to MOD:00110.","definition_xrefs":["Unimod:277"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00597 methyl methanethiosulfonate (obsolete MOD:00597)","termid":"MOD:00597"}


id: PBO:0001043
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pop-Interacting Protein","termid":"PBO:0001043"}


id: GO:0106114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic cohesin dsDNA (leading strand) loading.","definition_xrefs":["PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic cohesin dsDNA (leading strand) loading (obsolete GO:0106114)","termid":"GO:0106114"}


id: PBO:0044746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 24","termid":"PBO:0044746"}


id: MONDO:0005859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common form of leishmaniasis that is transmitted through the bite of female phlebotomine sand flies or after exposure to leishmania parasites. It is characterized by skin lesions at the site of insect bite which typically develop within weeks or months after exposure. The lesions typically progress from small papules to open sores with raised borders and central ulcers which can be covered with scales or crust.","definition_xrefs":["NCIT:C34769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leishmaniasis","termid":"MONDO:0011989"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucocutaneous leishmaniasis","secondary_identifiers":["UMLS:C1328252","MEDGEN:233065","ICD10CM:B55.2","ICD9:085.5","EFO:0007379","MESH:D007897","DOID:9155","icd11.foundation:1942095878"],"synonyms":[{"name":"American cutaneous leishmaniasis","type":"exact"},{"name":"American mucocutaneous leishmaniasis","type":"exact"},{"name":"New World cutaneous leishmaniasis","type":"exact"},{"name":"cutaneous leishmaniasis, American","type":"exact"},{"name":"mucocutaneous leishmaniasis, (American)","type":"exact"},{"name":"mucocutaneous leishmaniasis, American","type":"exact"}],"termid":"MONDO:0005859","xrefs":{"Monarch":{"xref_id":"0005859"}}}


id: PBO:0057276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 499a","termid":"PBO:0057276"}


id: GO:0007018
data:
  {"annotated_genes":["SJAG_02336","SJAG_02045","SJAG_01371","SJAG_04884","SJAG_01662","SJAG_01370","SJAG_04597","SJAG_00851","SJAG_00140","SJAG_02731","SJAG_05319","SJAG_00368","SJAG_01775","SJAG_02848","SJAG_03835","SJAG_00794","SJAG_02431","SJAG_03437","SJAG_04001","SJAG_00042","SJAG_01297","SJAG_00332","SJAG_01211","SJAG_00773","SJAG_04143","SJAG_01805","SJAG_02509","SJAG_05220","SJAG_01224","SJAG_05185","SJAG_04387","SJAG_03673","SJAG_00113","SJAG_02286","SJAG_03073","SJAG_01546","SJAG_00594","SJAG_02561","SJAG_00397","SJAG_02624","SJAG_01613","SJAG_02814","SJAG_02761","SJAG_03540","SJAG_04745","SJAG_05266","SJAG_03683","SJAG_00918","SJAG_02737","SJAG_04076","SJAG_04003","SJAG_01863","SJAG_02651","SJAG_00930"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61313,63864,73553],"is_not":false,"summary":null,"term":"GO:0007018"},{"annotations":[90757,100485,87519,94965,91148,102717,111150,110801,113689,97333,91606,103009,116684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[102515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034643"},{"annotations":[106346,101188,110975],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[117888,108894,118403,98983,100139,115667,102187,95069,93560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[109655,94531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099606"},{"annotations":[98989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031534"},{"annotations":[103649,100141,108010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007079"},{"annotations":[101198],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0062168"},{"annotations":[113691,116688,70455,101199,74741,107182,109360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[97408,98995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[76182,97335,87523,98996,91150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[98997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031535"},{"annotations":[94174],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[103502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[108019,100145,118407,103657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[113840,90745,100280,107258,96532,88902,116658,109642,108640,98382,89506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[116689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140405"},{"annotations":[90914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"},{"annotations":[104633,104302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.","definition_xrefs":["ISBN:0815316194","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_02848":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_03683":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04076":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-based movement","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-983189"],"termid":"GO:0007018","terms_by_termid":{"GO:0000743":null,"GO:0007018":null,"GO:0007079":null,"GO:0010970":null,"GO:0030989":null,"GO:0031534":null,"GO:0031535":null,"GO:0032118":null,"GO:0034643":null,"GO:0047496":null,"GO:0062168":null,"GO:0090561":null,"GO:0098863":null,"GO:0099117":null,"GO:0099606":null,"GO:0140210":null,"GO:0140405":null,"GO:1902854":null,"GO:1990571":null,"GO:1990976":null}}


id: GO:0060201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-sculpted acetylcholine transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"clathrin-sculpted acetylcholine transport vesicle","termid":"GO:0060200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin-sculpted acetylcholine transport vesicle membrane","synonyms":[{"name":"clathrin sculpted acetylcholine constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"clathrin sculpted acetylcholine transport vesicle membrane","type":"exact"}],"termid":"GO:0060201"}


id: GO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_muscle","MA:0001271","GOC:dph","GOC:mtg_sensu","PMID:16638982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle tissue development","termid":"GO:0007519"},{"relation_name":"is_a","term_name":"skeletal muscle organ development","termid":"GO:0060538"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extraocular skeletal muscle development","termid":"GO:0002074"}


id: GO:1903169
data:
  {"annotated_genes":["SJAG_03631","SJAG_00296","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90981,113107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[101898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion transmembrane transport.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","GO_REF:0000058","PMID:24125847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium ion membrane transport","type":"exact"},{"name":"regulation of transmembrane calcium transport","type":"exact"}],"termid":"GO:1903169","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:0140778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A protein-containing complex stabilizing activity that prevents dissociation of microtubules.","definition_xrefs":["PMID:34970964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex stabilizing activity","termid":"GO:0140777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"microtubule stabilizing activity","termid":"GO:0140778"}


id: PBO:0003093
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase deficiency","termid":"PBO:0003093"}


id: PBO:0046976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM86B2 divergent transcript","termid":"PBO:0046976"}


id: PBO:0068210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 517","termid":"PBO:0068210"}


id: MONDO:0024454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the sacral nerve plexus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumbosacral plexus lesion","termid":"MONDO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"sacral nerve plexus disorder","secondary_identifiers":["MEDGEN:419804","MESH:C537224","UMLS:C2931445"],"synonyms":[{"name":"disease of sacral nerve plexus","type":"exact"},{"name":"disease or disorder of sacral nerve plexus","type":"exact"},{"name":"disorder of sacral nerve plexus","type":"exact"},{"name":"sacral nerve plexus disease or disorder","type":"exact"},{"name":"sacral nerve plexus disorder","type":"exact"},{"name":"sacral plexopathy","type":"exact"}],"termid":"MONDO:0024454","xrefs":{"Monarch":{"xref_id":"0024454"}}}


id: MONDO:0013864
data:
  {"annotated_genes":["SJAG_01067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85917],"is_not":false,"summary":null,"term":"MONDO:0013864"}]},"cv_name":"mondo","definition":"Any Cornelia de Lange syndrome in which the cause of the disease is a mutation in the RAD21 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cornelia de Lange syndrome","termid":"MONDO:0016033"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01067":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15837","UMLS:C3553517","OMIM:614701","MEDGEN:766431","DOID:0080508"],"synonyms":[{"name":"CDLS4","type":"related"},{"name":"Cornelia DE Lange syndrome 4","type":"related"},{"name":"Cornelia De Lange syndrome type 4","type":"exact"},{"name":"Cornelia de Lange syndrome 4","type":"exact"},{"name":"Cornelia de Lange syndrome caused by mutation in RAD21","type":"exact"},{"name":"RAD21 Cornelia de Lange syndrome","type":"exact"}],"termid":"MONDO:0013864","terms_by_termid":{"MONDO:0013864":null},"xrefs":{"Monarch":{"xref_id":"0013864"}}}


id: GO:1900939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"negatively_regulates","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of (Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"down regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"inhibition of (Z)-nonadeca-1,14-diene metabolic process","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900939"}


id: PBO:0004181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase I","termid":"PBO:0004181"}


id: GO:0097605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the nuclear envelope.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nuclear envelope permeability (obsolete GO:0097605)","synonyms":[{"name":"regulation of nuclear membrane permeability","type":"related"}],"termid":"GO:0097605"}


id: GO:0009280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. In Gram-negative bacteria the membrane that separates the cytoplasm from the murein sacculus.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall inner membrane (obsolete GO:0009280)","synonyms":[{"name":"cell wall inner membrane","type":"exact"},{"name":"cytoplasmic membrane","type":"broad"}],"termid":"GO:0009280"}


id: PBO:0011152
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ichthyosis","termid":"PBO:0011152"}


id: PBO:0038956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiponectin receptor 2","termid":"PBO:0038956"}


id: PBO:0073033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretin","termid":"PBO:0073033"}


id: PBO:0058926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7e","termid":"PBO:0058926"}


id: PR:P05219
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nda3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.07c","synonyms":[{"name":"Spom972h-nda3","type":"exact"},{"name":"beta-tubulin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05219"}


id: GO:0035694
data:
  {"annotated_genes":["SJAG_00354","SJAG_00476","SJAG_03393","SJAG_00984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93038,97082,100854,106718],"is_not":false,"summary":null,"term":"GO:0035694"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a mitochondrial protein. This process is necessary to maintain the healthy state of mitochondria and is thought to occur via the induction of an intramitochondrial lysosome-like organelle that acts to eliminate the damaged oxidised mitochondrial proteins without destroying the mitochondrial structure.","definition_xrefs":["GOC:sp","PMID:21264228","PMID:21264221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"part_of","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00354":null,"SJAG_00476":null,"SJAG_00984":null,"SJAG_03393":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9837999"],"synonyms":[{"name":"catabolism of mitochondrial protein","type":"exact"},{"name":"degradation of damaged mitochondrial protein","type":"exact"}],"termid":"GO:0035694","terms_by_termid":{"GO:0035694":null}}


id: PBO:0116579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gfo/idh/mocA family NAD(P)H oxidoreductase family, implicated in energy generation","termid":"PBO:0116579"}


id: MONDO:0017651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary myoclonus (obsolete MONDO:0017651)","secondary_identifiers":["Orphanet:306750"],"termid":"MONDO:0017651","xrefs":{"Monarch":{"xref_id":"0017651"}}}


id: PBO:0038863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase RNA specific","termid":"PBO:0038863"}


id: MONDO:1010167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gangliosidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gangliosidosis, non-human animal","secondary_identifiers":["OMIA:000401"],"termid":"MONDO:1010167","xrefs":{"Monarch":{"xref_id":"1010167"}}}


id: MONDO:1010998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syringomyelia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syringomyelia, non-human animal","termid":"MONDO:1010236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia, dog","secondary_identifiers":["OMIA:000965-9615"],"termid":"MONDO:1010998","xrefs":{"Monarch":{"xref_id":"1010998"}}}


id: PBO:0047181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 200 member B","termid":"PBO:0047181"}


id: PBO:0045722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F5 divergent transcript","termid":"PBO:0045722"}


id: MONDO:1010898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurological disease characterized by ataxia, hypermetria, wide-base stance, and strabismus that occurs in cattle due to a sphingomyelinase deficiency resulting in the accumulation of sphingomyelin in neurons and macrophages.","definition_xrefs":["PMID:18424834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, cattle","termid":"MONDO:1010862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelinase deficiency, cattle","secondary_identifiers":["OMIA:001795-9913"],"synonyms":[{"name":"Niemann-Pick disease, type A, cattle","type":"related"}],"termid":"MONDO:1010898","xrefs":{"Monarch":{"xref_id":"1010898"}}}


id: FYPO:0005639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to iron ion starvation","synonyms":[{"name":"normal RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"normal RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to iron starvation","type":"exact"},{"name":"normal RNA level during iron ion starvation","type":"exact"},{"name":"normal mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"normal transcript level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0005639"}


id: PBO:0072544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 74","termid":"PBO:0072544"}


id: PBO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 73","termid":"PBO:0052806"}


id: GO:0043751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (polyphosphate)n + AMP = (polyphosphate)n-1 + ADP.","definition_xrefs":["PMID:11237733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"polyphosphate:AMP phosphotransferase activity","synonyms":[{"name":"PAP","type":"exact"},{"name":"PPT","type":"broad"}],"termid":"GO:0043751"}


id: PBO:0085495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome activator; binds the core proteasome (CP) and stimulates proteasome-mediated protein degradation by inducing gate opening; required for sequestering CP into proteasome storage granule (PSG) during quiescent phase and for nuclear import of CP in proliferating cells; required for resistance to bleomycin, may be involved in protecting against oxidative damage; similar to mammalian PA200","termid":"PBO:0085495"}


id: GO:0140030
data:
  {"annotated_genes":["SJAG_01325","SJAG_00184","SJAG_03255","SJAG_04396","SJAG_02992","SJAG_03628","SJAG_03230","SJAG_03345","SJAG_00052","SJAG_02500","SJAG_00591","SJAG_02701","SJAG_04384","SJAG_05252","SJAG_00837","SJAG_02625","SJAG_00941"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036435"},{"annotations":[75094,70410,78581,78792,79798,76887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070577"},{"annotations":[76967,78275,77045,78489,78808,75812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035064"},{"annotations":[75395,77716,70412,75306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031593"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon post-translation modification of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00184":null,"SJAG_00591":null,"SJAG_00837":null,"SJAG_00941":null,"SJAG_01325":null,"SJAG_02500":null,"SJAG_02625":null,"SJAG_02701":null,"SJAG_02992":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03345":null,"SJAG_03628":null,"SJAG_04384":null,"SJAG_04396":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"modification-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"modified protein binding","type":"related"}],"termid":"GO:0140030","terms_by_termid":{"GO:0031593":null,"GO:0035064":null,"GO:0036435":null,"GO:0070577":null}}


id: MONDO:0005854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mixed connective tissue disease (MCTD) is a rare autoimmune disorder that is characterized by features commonly seen in three different connective tissue disorders: systemic lupus erythematosus, scleroderma, and polymyositis. Some affected people may also have symptoms of rheumatoid arthritis. Although MCTD can affect people of all ages, it appears to be most common in women under age 30. Signs and symptoms vary but may include Raynaud's phenomenon ; arthritis; heart, lung and skin abnormalities; kidney disease; muscle weakness, and dysfunction of the esophagus. The cause of MCTD is currently unknown. There is no cure but certain medications such as nonsteroidal anti-inflammatory drugs (NSAIDs), corticosteroids and immunosuppresivedrugsmay help manage the symptoms.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"overlapping connective tissue disease","termid":"MONDO:0016663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"mixed connective tissue disease","secondary_identifiers":["GARD:7051","SCTID:398049005","MESH:D008947","EFO:0007374","MedDRA:10027754","icd11.foundation:891652224","NANDO:1200278","NANDO:2200430","NCIT:C84892","Orphanet:809","DOID:3492","NORD:1451","UMLS:C0026272","MEDGEN:10069"],"synonyms":[{"name":"MCTD","type":"exact"},{"name":"connective tissue disease overlap syndrome","type":"exact"},{"name":"mixed collagen vascular disease","type":"exact"},{"name":"sharp syndrome","type":"exact"}],"termid":"MONDO:0005854","xrefs":{"Monarch":{"xref_id":"0005854"}}}


id: MONDO:0014997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the MAPKBP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 20","secondary_identifiers":["MEDGEN:934607","OMIM:617271","GARD:18181","UMLS:C4310640","DOID:0111127"],"synonyms":[{"name":"MAPKBP1 nephronophthisis (disease)","type":"exact"},{"name":"NPHP20","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in MAPKBP1","type":"exact"},{"name":"nephronophthisis 20","type":"exact"},{"name":"nephronophthisis type 20","type":"exact"}],"termid":"MONDO:0014997","xrefs":{"Monarch":{"xref_id":"0014997"}}}


id: PBO:0005385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 5","termid":"PBO:0005385"}


id: MONDO:0018647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"secondary sclerosing cholangitis","secondary_identifiers":["Orphanet:447774","SCTID:197442005","UMLS:C0400978","MEDGEN:586530","GARD:21869"],"termid":"MONDO:0018647","xrefs":{"Monarch":{"xref_id":"0018647"}}}


id: PBO:0044532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defender against cell death 1 pseudogene 1","termid":"PBO:0044532"}


id: PBO:0042302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD9 molecule","termid":"PBO:0042302"}


id: GO:0042640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair.","definition_xrefs":["PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cycle phase","termid":"GO:0044851"},{"relation_name":"part_of","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anagen","synonyms":[{"name":"hair growth","type":"related"}],"termid":"GO:0042640"}


id: PBO:0079503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 1","termid":"PBO:0079503"}


id: GO:0097097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nasal suture is generated and organized.","definition_xrefs":["GOC:sl","Wikipedia:Cranial_sutures","GOC:pr","Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial suture morphogenesis","termid":"GO:0097096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nasal suture morphogenesis","synonyms":[{"name":"internasal suture morphogenesis","type":"exact"}],"termid":"GO:0097097"}


id: PBHQ:004
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_has_qualifier_range","direct_ancestors":[{"relation_name":"is_a","term_name":"has_qualifier_range","termid":"PBHQ:001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","termid":"PBHQ:004"}


id: SO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The canonical 3' splice site has the sequence \\\"AG\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_cis_splice_site","termid":"SO:0000164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canonical_three_prime_splice_site","synonyms":[{"name":"canonical 3' splice site","type":"exact"},{"name":"canonical three prime splice site","type":"exact"}],"termid":"SO:0000676"}


id: GO:0016458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.","definition_xrefs":["GOC:tb","GOC:dph","GOC:dos","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete gene silencing (obsolete GO:0016458)","secondary_identifiers":["Wikipedia:Gene_silencing"],"termid":"GO:0016458"}


id: PBO:0084135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity Ca2+/Mn2+ P-type ATPase; required for Ca2+ and Mn2+ transport into Golgi; involved in Ca2+ dependent protein sorting, processing; D53A mutant (Mn2+ transporting) is rapamycin sensitive, Q783A mutant (Ca2+ transporting) is rapamycin resistant; Mn2+ transport into Golgi lumen required for rapamycin sensitivity; mutations in human homolog ATP2C1 cause acantholytic skin condition Hailey-Hailey disease; human ATP2C1 can complement yeast null mutant","termid":"PBO:0084135"}


id: GO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5,6,7,8-tetrahydrofolate + trimethylsulfonium = (6S)-5-methyl-5,6,7,8-tetrahydrofolate + dimethyl sulfide + H+.","definition_xrefs":["EC:2.1.1.19","RHEA:13693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"trimethylsulfonium-tetrahydrofolate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02573","MetaCyc:2.1.1.19-RXN"],"synonyms":[{"name":"trimethylsulfonium-tetrahydrofolate methyltransferase activity","type":"related"},{"name":"trimethylsulfonium:tetrahydrofolate N-methyltransferase activity","type":"related"},{"name":"trimethylsulphonium-tetrahydrofolate N-methyltransferase activity","type":"exact"}],"termid":"GO:0047147"}


id: GO:0061415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of a nonfermentable carbon source leads to a decrease of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["GOC:dph","PMID:19686338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription from RNA polymerase II promoter","termid":"GO:0000437"},{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source","termid":"GO:0061413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source","termid":"GO:0061415"}


id: PR:O74949
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC553.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C553.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.12c","synonyms":[{"name":"Spom972h-SPCC553.12c","type":"exact"}],"termid":"PR:O74949"}


id: MONDO:0003330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blockage of the normal flow of contents of the urinary tract.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary tract obstruction","secondary_identifiers":["ICD9:599.60","NANDO:2200178","ICD9:599.6","DOID:5200","MEDGEN:64247","NCIT:C3675","UMLS:C0178879","EFO:0009571","SCTID:7163005"],"synonyms":[{"name":"obstructive uropathy","type":"exact"},{"name":"urinary obstruction","type":"exact"}],"termid":"MONDO:0003330","xrefs":{"Monarch":{"xref_id":"0003330"}}}


id: PBO:0027467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_endocytosis_during_meiotic_cell_cycle","termid":"PBO:0027467"}


id: GO:0043547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a GTPase.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of GTPase activity","termid":"GO:0043087"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of GTPase activity","secondary_identifiers":["GO:0032321","GO:0032851","GO:0032850","GO:0032852","GO:0032854","GO:0043089","GO:0032320","GO:0032853","GO:0032855"],"synonyms":[{"name":"activation of GTPase activity","type":"narrow"},{"name":"positive regulation of ARF GTPase activity","type":"narrow"},{"name":"positive regulation of Cdc42 GTPase activity","type":"narrow"},{"name":"positive regulation of Rab GTPase activity","type":"narrow"},{"name":"positive regulation of Rac GTPase activity","type":"narrow"},{"name":"positive regulation of Ral GTPase activity","type":"narrow"},{"name":"positive regulation of Ran GTPase activity","type":"narrow"},{"name":"positive regulation of Rap GTPase activity","type":"narrow"},{"name":"positive regulation of Ras GTPase activity","type":"narrow"},{"name":"positive regulation of Rho GTPase activity","type":"narrow"},{"name":"stimulation of ARF GTPase activity","type":"narrow"},{"name":"stimulation of Cdc42 GTPase activity","type":"narrow"},{"name":"stimulation of GTPase activity","type":"narrow"},{"name":"stimulation of Rab GTPase activity","type":"narrow"},{"name":"stimulation of Rac GTPase activity","type":"narrow"},{"name":"stimulation of Ral GTPase activity","type":"narrow"},{"name":"stimulation of Ran GTPase activity","type":"narrow"},{"name":"stimulation of Rap GTPase activity","type":"narrow"},{"name":"stimulation of Ras GTPase activity","type":"narrow"},{"name":"stimulation of Rho GTPase activity","type":"narrow"},{"name":"up regulation of ARF GTPase activity","type":"narrow"},{"name":"up regulation of Cdc42 GTPase activity","type":"narrow"},{"name":"up regulation of GTPase activity","type":"exact"},{"name":"up regulation of Rab GTPase activity","type":"narrow"},{"name":"up regulation of Rac GTPase activity","type":"narrow"},{"name":"up regulation of Ral GTPase activity","type":"narrow"},{"name":"up regulation of Ran GTPase activity","type":"narrow"},{"name":"up regulation of Rap GTPase activity","type":"narrow"},{"name":"up regulation of Ras GTPase activity","type":"narrow"},{"name":"up regulation of Rho GTPase activity","type":"narrow"},{"name":"up-regulation of ARF GTPase activity","type":"narrow"},{"name":"up-regulation of Cdc42 GTPase activity","type":"narrow"},{"name":"up-regulation of GTPase activity","type":"exact"},{"name":"up-regulation of Rab GTPase activity","type":"narrow"},{"name":"up-regulation of Rac GTPase activity","type":"narrow"},{"name":"up-regulation of Ral GTPase activity","type":"narrow"},{"name":"up-regulation of Ran GTPase activity","type":"narrow"},{"name":"up-regulation of Rap GTPase activity","type":"narrow"},{"name":"up-regulation of Ras GTPase activity","type":"narrow"},{"name":"up-regulation of Rho GTPase activity","type":"narrow"},{"name":"upregulation of ARF GTPase activity","type":"narrow"},{"name":"upregulation of Cdc42 GTPase activity","type":"narrow"},{"name":"upregulation of GTPase activity","type":"exact"},{"name":"upregulation of Rab GTPase activity","type":"narrow"},{"name":"upregulation of Rac GTPase activity","type":"narrow"},{"name":"upregulation of Ral GTPase activity","type":"narrow"},{"name":"upregulation of Ran GTPase activity","type":"narrow"},{"name":"upregulation of Rap GTPase activity","type":"narrow"},{"name":"upregulation of Ras GTPase activity","type":"narrow"},{"name":"upregulation of Rho GTPase activity","type":"narrow"}],"termid":"GO:0043547"}


id: PBO:0056133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme like 2","termid":"PBO:0056133"}


id: GO:0071399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to linoleic acid","termid":"GO:0070543"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to linoleic acid","synonyms":[{"name":"cellular response to linoleate","type":"exact"}],"termid":"GO:0071399"}


id: MONDO:0020437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrioventricular septal defect with communication at the atrial level only.","definition_xrefs":["PMID:34304616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect, ostium primum type","secondary_identifiers":["MEDGEN:1825952","MESH:C548006","Orphanet:99106","MESH:D006344","SCTID:17718000","UMLS:C5680294","icd11.foundation:1159570489","GARD:10695"],"synonyms":[{"name":"ASD ostium primum type","type":"exact"},{"name":"ASD, ostium primum type","type":"exact"},{"name":"PAVC","type":"exact"},{"name":"PAVSD","type":"exact"},{"name":"atrial septal defect ostium primum","type":"exact"},{"name":"atrioventricular defect with atrial shunting only","type":"exact"},{"name":"incomplete atrioventricular canal defect with isolated atrial component","type":"exact"},{"name":"incomplete atrioventricular septal defect with isolated atrial component","type":"exact"},{"name":"ostium primum ASD","type":"exact"},{"name":"partial atrioventricular canal defect with isolated atrial component","type":"exact"},{"name":"partial atrioventricular septal defect","type":"exact"},{"name":"partial atrioventricular septal defect: ostium primum type","type":"exact"},{"name":"primum atrial septal defect","type":"exact"}],"termid":"MONDO:0020437","xrefs":{"Monarch":{"xref_id":"0020437"}}}


id: PBO:0044189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsinogen B2","termid":"PBO:0044189"}


id: PR:O74822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC337.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C337.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.11","synonyms":[{"name":"Spom972h-SPBC337.11","type":"exact"}],"termid":"PR:O74822"}


id: PR:Q9P7M4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPAP27G11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.14c","synonyms":[{"name":"Spom972h-SPAP27G11.14c","type":"exact"}],"termid":"PR:Q9P7M4"}


id: MOD:00854
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine to L-lysinium (protonated L-lysine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"protonated residue","termid":"MOD:01699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-lysine (L-lysinium) residue","termid":"MOD:00854"}


id: GO:0090082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of canonical Wnt signaling pathway that positively regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:mtg_heart","PMID:16860783"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway (obsolete GO:0090082)","synonyms":[{"name":"positive regulation of heart induction by negative regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of heart induction by negative regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of heart induction by negative regulation of canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0090082"}


id: GO:1900022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of D-erythro-sphingosine kinase activity.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of D-erythro-sphingosine kinase activity (obsolete GO:1900022)","synonyms":[{"name":"regulation of sphingosine kinase activity","type":"exact"}],"termid":"GO:1900022"}


id: GO:0072127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal capsule over time, from its formation to the mature structure. The renal capsule is the tough fibrous layer surrounding the kidney, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage. During development, it comprises a single layer of flattened cells that lie just above the cortical stroma and the condensed mesenchyme of the nephrogenic zone. It is in this region that the early stages of nephron induction and formation of new generations ureteric bud branches occur, as the kidney expands.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal capsule development","termid":"GO:0072127"}


id: PR:O74424
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup211 gene.","definition_xrefs":["UniProtKB:O74424","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup211 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.08c","synonyms":[{"name":"Spom972h-nup211","type":"exact"},{"name":"nuclear pore protein nup211 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74424"}


id: GO:0021589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellum. This process pertains to the physical shaping of a rudimentary structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.","definition_xrefs":["GOC:dgh","ISBN:0838580343","GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"hindbrain structural organization","termid":"GO:0021577"},{"relation_name":"part_of","term_name":"cerebellum morphogenesis","termid":"GO:0021587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum structural organization","synonyms":[{"name":"cerebellum structural organisation","type":"exact"}],"termid":"GO:0021589"}


id: GO:1904222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serine C-palmitoyltransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:16120614","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of serine C-palmitoyltransferase activity","termid":"GO:1904220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serine C-palmitoyltransferase activity","synonyms":[{"name":"activation of 3-oxosphinganine synthetase activity","type":"narrow"},{"name":"activation of SPT","type":"related"},{"name":"activation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"activation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"narrow"},{"name":"activation of serine C-palmitoyltransferase activity","type":"narrow"},{"name":"positive regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"positive regulation of SPT","type":"related"},{"name":"positive regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"positive regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"up regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"up regulation of SPT","type":"related"},{"name":"up regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"up regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"up regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"up-regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"up-regulation of SPT","type":"related"},{"name":"up-regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"up-regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"up-regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"upregulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"upregulation of SPT","type":"related"},{"name":"upregulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"upregulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"upregulation of serine C-palmitoyltransferase activity","type":"exact"}],"termid":"GO:1904222"}


id: PBO:0072219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 2","termid":"PBO:0072219"}


id: PBO:0002177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-1 alpha binding zinc finger protein Zpr1 (predicted)","termid":"PBO:0002177"}


id: PBO:0057608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-5","termid":"PBO:0057608"}


id: SO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds in which: the main-chain NH of residue(i) is H-bonded to the main-chain CO of residue(i+4), the main-chain CO of residue i is H-bonded to the main-chain NH of residue(i+3), these loops have an RL nest at residues i+2 and i+3.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_bulge_loop","termid":"SO:0001108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop_five","secondary_identifiers":["BS:00210"],"synonyms":[{"name":"beta bulge loop five","type":"exact"}],"termid":"SO:0001109"}


id: FYPO:0007078
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119150,119147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a meiotic cell cycle process normally (i.e. indistinguishably from wild type). A meiotic cell cycle process is any of the processes that form part of the meiotic cell cycle, and thereby ensures successive accurate and complete genome replication and meiotic chromosome segregation.","definition_xrefs":["PomBase:mah","GO:0022402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic cell cycle process","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"termid":"FYPO:0007078","terms_by_termid":{"FYPO:0000590":null}}


id: PBO:0049725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 6 pseudogene 3","termid":"PBO:0049725"}


id: MONDO:0859262
data:
  {"annotated_genes":["SJAG_00604"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86601],"is_not":false,"summary":null,"term":"MONDO:0859262"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00604":null},"genotype_count":0,"is_obsolete":false,"name":"ACCES syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619959","UMLS:C5677019","MEDGEN:1804308"],"synonyms":[{"name":"aplasia cutis congenita with ectrodactyly skeletal syndrome","type":"exact"}],"termid":"MONDO:0859262","terms_by_termid":{"MONDO:0859262":null},"xrefs":{"Monarch":{"xref_id":"0859262"}}}


id: FYPO:0001567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular histidine level","synonyms":[{"name":"increased cellular L-histidine level","type":"exact"},{"name":"increased cellular histidine level during mitotic cell cycle","type":"related"},{"name":"increased cellular histidine level during vegetative growth","type":"exact"},{"name":"increased histidine accumulation","type":"related"}],"termid":"FYPO:0001567"}


id: FYPO:0000483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of mitotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of mitotic recombination","synonyms":[{"name":"increased rate of mitotic recombination during mitotic cell cycle","type":"related"},{"name":"increased rate of mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: increased rate","type":"related"}],"termid":"FYPO:0000483"}


id: PBO:0075165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D1 polypeptide","termid":"PBO:0075165"}


id: MONDO:0024478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchymal hamartoma","secondary_identifiers":["MEDGEN:83108","UMLS:C0334090","NCIT:C40427"],"synonyms":[{"name":"mesenchymal hamartoma","type":"exact"}],"termid":"MONDO:0024478","xrefs":{"Monarch":{"xref_id":"0024478"}}}


id: PR:Q9UTA0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.11c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.11c","synonyms":[{"name":"Spom972h-SPAC27E2.11c","type":"exact"}],"termid":"PR:Q9UTA0"}


id: PBO:0030022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_asymmetric_protein_localization_to_old_or_new_mitotic_spindle_pole_body","termid":"PBO:0030022"}


id: PR:O94699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.16c gene.","definition_xrefs":["UniProtKB:O94699","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein C83.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.16c","synonyms":[{"name":"Spom972h-SPBC83.16c","type":"exact"}],"termid":"PR:O94699"}


id: GO:0141162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cAMP/PKA signal transduction.","definition_xrefs":["PMID:17376027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cAMP/PKA signal transduction","termid":"GO:0141161"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cAMP/PKA signal transduction","termid":"GO:0141156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cAMP/PKA signal transduction","synonyms":[{"name":"negative regulation of cAMP/PKA signaling","type":"exact"}],"termid":"GO:0141162"}


id: GO:0005714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes in leptotene or zygotene during meiosis I.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination nodule","termid":"GO:0005713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"early recombination nodule","termid":"GO:0005714"}


id: GO:0099099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ion channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["PMID:35704701","Wikipedia:G_protein-gated_ion_channel","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"G-protein gated monoatomic ion channel activity","synonyms":[{"name":"G-protein gated ion channel activity","type":"broad"}],"termid":"GO:0099099"}


id: PBO:0063430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 4","termid":"PBO:0063430"}


id: SO:0002143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2B modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2B_acetylation_site","synonyms":[{"name":"H2Bac","type":"exact"},{"name":"histone 2B acetylation site","type":"exact"}],"termid":"SO:0002143"}


id: PATO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a mother.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000434 maternal (obsolete PATO:0000434)","termid":"PATO:0000434"}


id: MONDO:1010569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, horse","secondary_identifiers":["OMIA:000278-9796"],"termid":"MONDO:1010569","xrefs":{"Monarch":{"xref_id":"1010569"}}}


id: GO:0032370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of lipid localization","termid":"GO:1905954"},{"relation_name":"positively_regulates","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid transport","synonyms":[{"name":"activation of lipid transport","type":"narrow"},{"name":"stimulation of lipid transport","type":"narrow"},{"name":"up regulation of lipid transport","type":"exact"},{"name":"up-regulation of lipid transport","type":"exact"},{"name":"upregulation of lipid transport","type":"exact"}],"termid":"GO:0032370"}


id: PBO:0084386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity methionine permease; similar to Mup1p","termid":"PBO:0084386"}


id: MONDO:0033614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 83, autosomal recessive","secondary_identifiers":["MEDGEN:1759445","DOID:0112346","UMLS:C5436637","OMIM:619027","Orphanet:631076"],"synonyms":[{"name":"SPG83","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 83","type":"exact"}],"termid":"MONDO:0033614","xrefs":{"Monarch":{"xref_id":"0033614"}}}


id: GO:0060582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in commitment of a cell to a fate in a developmental field. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate determination involved in pattern specification","termid":"GO:0060582"}


id: GO:0007154
data:
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