# terms

id: PBO:0018223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, DUF3128, human c22orf39 ortholog","termid":"PBO:0018223"}


id: MONDO:1011272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease created by lentiviral transgenesis to create pigs with a deleterious mutation in the GUCY2D gene known to cause cone-rod dystrophy 6 in humans.","definition_xrefs":["OMIA:001929-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy, GUCY2D-related, pig","synonyms":[{"name":"retinal atrophy - cone-rod dystrophy 6, pig","type":"related"}],"termid":"MONDO:1011272","xrefs":{"Monarch":{"xref_id":"1011272"}}}


id: GO:1904988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell activation.","definition_xrefs":["GOC:BHF_miRNA","GOC:bc","GOC:BHF","PMID:24255059","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"is_a","term_name":"regulation of endothelial cell activation","termid":"GO:1904987"},{"relation_name":"negatively_regulates","term_name":"endothelial cell activation","termid":"GO:0042118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell activation","synonyms":[{"name":"down regulation of endothelial cell activation","type":"exact"},{"name":"down-regulation of endothelial cell activation","type":"exact"},{"name":"downregulation of endothelial cell activation","type":"exact"},{"name":"inhibition of endothelial cell activation","type":"narrow"}],"termid":"GO:1904988"}


id: GO:0060354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell adhesion molecule production","termid":"GO:0060353"},{"relation_name":"negatively_regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion molecule production","termid":"GO:0060354"}


id: FYPO:0009078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing ethanol as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on ethanol carbon source","synonyms":[{"name":"decreased growth on ethanol carbon source","type":"broad"},{"name":"decreased vegetative cell growth on ethanol carbon source","type":"exact"},{"name":"reduced cell growth on ethanol carbon source","type":"related"},{"name":"slow cell growth on ethanol carbon source","type":"narrow"}],"termid":"FYPO:0009078"}


id: PBO:0090804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 (UBR family) Ubr11","termid":"PBO:0090804"}


id: PBO:0061819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 9 Y-linked","termid":"PBO:0061819"}


id: PBO:0026919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K12_acetylation","termid":"PBO:0026919"}


id: GO:0014836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a satellite cell becomes restricted such that it will develop into a myoblast. This occurs as part of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","PMID:16607119","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"},{"relation_name":"part_of","term_name":"myoblast differentiation involved in skeletal muscle regeneration","termid":"GO:0014835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment involved in skeletal muscle regeneration","termid":"GO:0014836"}


id: PBO:0078910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 1-1","termid":"PBO:0078910"}


id: MONDO:0013359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hyperaldosteronism type III (FH-III) is a rare heritable form of primary aldosteronism (PA) that is characterized by early-onset severe hypertension, non glucocorticoid-remediable hyperaldosteronism, overproduction of 18-oxocortisol and 18-hydroxycortisol, and profound hypokalemia.","definition_xrefs":["Orphanet:251274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperaldosteronism","termid":"MONDO:0016525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial hyperaldosteronism type III","secondary_identifiers":["OMIM:613677","GARD:12362","UMLS:C3838758","SCTID:703234002","MEDGEN:824604"],"synonyms":[{"name":"FH 3","type":"related"},{"name":"FH III","type":"related"},{"name":"FH-III","type":"exact"},{"name":"FH3","type":"exact"},{"name":"HALD3","type":"related"},{"name":"familial hyperaldosteronism type 3","type":"exact"},{"name":"hyperaldosteronism, familial, type 3","type":"related"},{"name":"hyperaldosteronism, familial, type III","type":"related"}],"termid":"MONDO:0013359","xrefs":{"Monarch":{"xref_id":"0013359"}}}


id: PBO:0086078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to globins; has a functional heme-binding domain; mutant has aneuploidy tolerance; transcription induced by stress conditions; may be involved in glucose signaling or metabolism; regulated by Rgt1","termid":"PBO:0086078"}


id: GO:0005546
data:
  {"annotated_genes":["SJAG_02613","SJAG_02657","SJAG_02166","SJAG_00118","SJAG_00368","SJAG_04644","SJAG_00117","SJAG_01748","SJAG_04960","SJAG_02572","SJAG_05179","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63057,72379,73459,87754,90512,99052,101523,106354,114628,116780,117277,118718],"is_not":false,"summary":null,"term":"GO:0005546"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-4,5-bisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' and 5' positions.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"phosphatidylinositol bisphosphate binding","termid":"GO:1902936"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00118":null,"SJAG_00368":null,"SJAG_01143":null,"SJAG_01748":null,"SJAG_02166":null,"SJAG_02572":null,"SJAG_02613":null,"SJAG_02657":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate binding","type":"exact"},{"name":"PIP2 binding","type":"broad"},{"name":"PtdIns(4,5)P2 binding","type":"exact"},{"name":"phosphatidylinositol 4,5-bisphosphate binding","type":"exact"}],"termid":"GO:0005546","terms_by_termid":{"GO:0005546":null}}


id: MONDO:0100087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A degenerative disease of the brain that causes gradual loss of memory, judgment, and the ability to function socially. About 25% of all Alzheimer disease is familial (more than 2 people in a family have AD). When Alzheimer disease begins before 60 or 65 years of age (early-onset AD) about 60% of the cases are familial (also known as Early-onset familial AD). These cases appear to be inherited in an autosomal dominant manner.","definition_xrefs":["GARD:0000632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease","termid":"MONDO:0004975"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"familial Alzheimer disease","secondary_identifiers":["UMLS:C0276496","MEDGEN:82914"],"synonyms":[{"name":"Alzheimer disease, familial","type":"exact"},{"name":"FAD","type":"exact"},{"name":"GARD:0000632","type":"exact"}],"termid":"MONDO:0100087","xrefs":{"Monarch":{"xref_id":"0100087"}}}


id: MONDO:0017788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractures - webbed neck - micrognathia - hypoplastic nipples syndrome","secondary_identifiers":["Orphanet:314002","MEDGEN:1661787","UMLS:C4751075","GARD:21364"],"synonyms":[{"name":"Dinno syndrome","type":"exact"}],"termid":"MONDO:0017788","xrefs":{"Monarch":{"xref_id":"0017788"}}}


id: MONDO:0010214
data:
  {"annotated_genes":["SJAG_04791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86397],"is_not":false,"summary":null,"term":"MONDO:0010214"}]},"cv_name":"mondo","definition":"Xeroderma pigmentosum variant is a milder subtype of xeroderma pigmentosum (XP), a rare genetic photodermatosis characterized by severe sun sensitivity and an increased risk of skin cancer.","definition_xrefs":["Orphanet:90342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xeroderma pigmentosum","termid":"MONDO:0019600"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"xeroderma pigmentosum variant type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536766","NCIT:C141367","DOID:0110847","MEDGEN:376352","OMIM:278750","UMLS:C1848410","GARD:5630"],"synonyms":[{"name":"XPV","type":"exact"},{"name":"photosensitivity with defective DNA synthesis","type":"exact"},{"name":"xeroderma pigmentosum variant","type":"related"},{"name":"xeroderma pigmentosum variant type","type":"exact"},{"name":"xeroderma pigmentosum with normal DNA repair rates","type":"exact"},{"name":"xeroderma pigmentosum, variant type","type":"related"}],"termid":"MONDO:0010214","terms_by_termid":{"MONDO:0010214":null},"xrefs":{"Monarch":{"xref_id":"0010214"}}}


id: PBO:0049268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-quadruplex forming sequence containing lncRNA","termid":"PBO:0049268"}


id: PBO:0029937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_with_elongated_germ_tubes_and_elongated_cells_(obsolete_FYPO:0002300)","termid":"PBO:0029937"}


id: PBO:0080842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 6","termid":"PBO:0080842"}


id: MONDO:0022397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal ciliopathy due to mutation in the retinitis pigmentosa-1 gene (obsolete MONDO:0022397)","secondary_identifiers":["Orphanet:156168"],"termid":"MONDO:0022397","xrefs":{"Monarch":{"xref_id":"0022397"}}}


id: PBO:0005781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase alpha subunit (predicted)","termid":"PBO:0005781"}


id: PBO:0061674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 62","termid":"PBO:0061674"}


id: MONDO:1011776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inborn error of hepatic metabolism, non-human animal","secondary_identifiers":["OMIA:000561"],"termid":"MONDO:1011776","xrefs":{"Monarch":{"xref_id":"1011776"}}}


id: PBO:0081355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 180","termid":"PBO:0081355"}


id: GO:0018463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxyhexanoate + NAD+ = 6-oxohexanoate + H+ + NADH.","definition_xrefs":["EC:1.1.1.258","RHEA:14225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-hydroxyhexanoate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05283","MetaCyc:6-HYDROXYHEXANOATE-OXIDATION-RXN","UM-BBD_reactionID:r0174"],"synonyms":[{"name":"6-hydroxyhexanoate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018463"}


id: GO:0014869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a muscle inactivity stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of inactivity","termid":"GO:0014863"},{"relation_name":"is_a","term_name":"response to muscle inactivity","termid":"GO:0014870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of muscle inactivity","termid":"GO:0014869"}


id: MONDO:0013472
data:
  {"annotated_genes":["SJAG_02919","SJAG_04567","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86532,86533,86534],"is_not":false,"summary":null,"term":"MONDO:0013472"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"fatal infantile hypertonic myofibrillar myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684001","Orphanet:280553","UMLS:C5190691","DOID:0080309","OMIM:613869","GARD:17296"],"synonyms":[{"name":"MFM, fatal infantile hypertonic, alpha-B crystallin-related","type":"related"},{"name":"alpha-B crystalin-related fatal infantile hypertonic myofibrillar myopathy","type":"exact"},{"name":"fatal infantile hypertonic myofibrillar myopathy","type":"exact"},{"name":"myofibrillar myopathy type 7","type":"related"},{"name":"myopathy, myofibrillar, fatal infantile hypertonic, alpha-B crystallin-related","type":"related"}],"termid":"MONDO:0013472","terms_by_termid":{"MONDO:0013472":null},"xrefs":{"Monarch":{"xref_id":"0013472"}}}


id: PATO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning with respect to an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alignment","termid":"PATO:0001652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misaligned with","synonyms":[{"name":"misaligned ","type":"exact"},{"name":"unaligned with","type":"exact"}],"termid":"PATO:0001654"}


id: PBO:0091714
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously incorrectly named as mtx2","termid":"PBO:0091714"}


id: PBO:0083864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fatty-acyl coenzyme A oxidase; involved in the fatty acid beta-oxidation pathway; localized to the peroxisomal matrix; component of a light sensing pathway, converting light into a hydrogen peroxide signal, modulating nucleo-cytoplasmic shuttling of stress-responsive transcription factor, Msn2p","termid":"PBO:0083864"}


id: PBO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-b (predicted)","termid":"PBO:0002372"}


id: GO:2000206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribosomal small subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ribosomal subunit export from nucleus","termid":"GO:2000200"},{"relation_name":"regulates","term_name":"ribosomal small subunit export from nucleus","termid":"GO:0000056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of ribosomal small subunit export from nucleus","synonyms":[{"name":"regulation of 30S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of 40S ribosomal subunit export from nucleus","type":"related"},{"name":"regulation of ribosomal small subunit export from cell nucleus","type":"exact"},{"name":"regulation of ribosomal small subunit export out of nucleus","type":"exact"},{"name":"regulation of ribosomal small subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of ribosomal small subunit-nucleus export","type":"exact"}],"termid":"GO:2000206"}


id: PBO:0055393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2823","termid":"PBO:0055393"}


id: MONDO:0012068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachial palsy, familial congenital","secondary_identifiers":["MEDGEN:324884","MESH:C563901","OMIM:608585","UMLS:C1837810"],"synonyms":[{"name":"brachial palsy, familial congenital","type":"exact"}],"termid":"MONDO:0012068","xrefs":{"Monarch":{"xref_id":"0012068"}}}


id: GO:0097326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a melanocyte to another cell via adhesion molecules.","definition_xrefs":["GOC:uh","PMID:22637532","CL:0000148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"melanocyte adhesion","termid":"GO:0097326"}


id: GO:0008625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with a ligand binding to a death domain receptor on the cell surface, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway via death domain receptors","synonyms":[{"name":"death receptor-mediated apoptosis","type":"narrow"},{"name":"induction of apoptosis via death domain receptors","type":"related"},{"name":"induction of apoptosis via death receptors","type":"exact"}],"termid":"GO:0008625"}


id: FYPO:0005528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin knobs in subtelomeric regions is decreased. Chromatin knobs are highly condensed chromatin bodies formed from subtelomeric heterochromatin (observed on chromosomes 1 and 2).","definition_xrefs":["PomBase:mah","PMID:26205977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"decreased subtelomeric chromatin knob formation","synonyms":[{"name":"decreased frequency of knob-containing nuclei","type":"related"},{"name":"decreased subtelomeric chromatin condensation","type":"broad"},{"name":"decreased subtelomeric chromatin knob assembly","type":"exact"},{"name":"reduced subtelomeric chromatin knob formation","type":"exact"}],"termid":"FYPO:0005528"}


id: GO:0009501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid whose main function is to synthesize and store starch.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amyloplast","secondary_identifiers":["Wikipedia:Amyloplast"],"termid":"GO:0009501"}


id: GO:0048222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix part that consists of cross-linked glycoproteins.","definition_xrefs":["PMID:7048321","GOC:mah","PMID:18508691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"glycoprotein network","secondary_identifiers":["Wikipedia:Extensin"],"synonyms":[{"name":"extensin","type":"exact"}],"termid":"GO:0048222"}


id: GO:0015413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ni2+(out) = ADP + phosphate + Ni2+(in).","definition_xrefs":["RHEA:15557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transporter activity","termid":"GO:0015099"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type nickel transporter activity","secondary_identifiers":["EC:7.2.2.11","MetaCyc:ABC-20-RXN","GO:0102016"],"synonyms":[{"name":"ATP-dependent nickel transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled nickel transmembrane transporter activity","type":"related"},{"name":"nickel ABC transporter","type":"exact"},{"name":"nickel ABC transporter activity","type":"exact"},{"name":"nickel porter activity","type":"related"},{"name":"nickel transporting ATPase activity","type":"related"},{"name":"nickel-transporting ATPase activity","type":"related"}],"termid":"GO:0015413"}


id: GO:0035987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an endoderm cell, a cell of the inner of the three germ layers of the embryo.","definition_xrefs":["GOC:yaf","CL:0000223","PMID:17624332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"endoderm formation","termid":"GO:0001706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell differentiation","synonyms":[{"name":"endoderm cell differentiation","type":"exact"}],"termid":"GO:0035987"}


id: FYPO:0006113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","gene_count":0,"genotype_count":0,"name":"obsolete increased chromatin-associated RNA level (obsolete FYPO:0006113)","termid":"FYPO:0006113"}


id: PBO:0068439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 11, pseudogene","termid":"PBO:0068439"}


id: MONDO:1012910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in white-tufted-ear marmoset due to a mutation in the ATXN3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia, ATXN3-related, white-tufted-ear marmoset","secondary_identifiers":["OMIA:002473-9483"],"synonyms":[{"name":"ataxia, spinocerebellar, ATXN3-related, white-tufted-ear marmoset","type":"exact"}],"termid":"MONDO:1012910","xrefs":{"Monarch":{"xref_id":"1012910"}}}


id: PBO:0117154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWOX antisense RNA 2","termid":"PBO:0117154"}


id: GO:0033100
data:
  {"annotated_genes":["SJAG_02165","SJAG_01009","SJAG_00545","SJAG_02629","SJAG_00411"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93714,105071,106269,107673],"is_not":false,"summary":null,"term":"GO:0033100"},{"annotations":[77628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"}]},"cv_name":"cellular_component","definition":"A Gcn5-independent multisubunit complex that catalyzes the acetylation of histone H3. The budding yeast complex includes Sas3p, Taf30p, and Yng1p.","definition_xrefs":["PMID:10817755","PMID:17157260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00411":null,"SJAG_00545":null,"SJAG_01009":null,"SJAG_02165":null,"SJAG_02629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NuA3 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033100","terms_by_termid":{"GO:0033100":null,"GO:1990467":null}}


id: FYPO:0004024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to cytoplasmic stress granules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoplasm","termid":"FYPO:0001788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to cytoplasmic stress granule","synonyms":[{"name":"normal protein localisation to cytoplasmic stress granule","type":"exact"},{"name":"normal protein localization to cytoplasmic stress granule during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cytoplasmic stress granule during vegetative growth","type":"exact"},{"name":"normal protein localization to stress granule","type":"exact"}],"termid":"FYPO:0004024"}


id: GO:0072452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of G2/M transition size control checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell size control checkpoint signaling","termid":"GO:0072470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to G2 transition size control checkpoint signaling","synonyms":[{"name":"G2/M transition size control checkpoint effector process","type":"exact"},{"name":"response to G2/M transition size control checkpoint signaling","type":"exact"},{"name":"response to mitotic cell cycle G2/M transition size control checkpoint signaling","type":"exact"},{"name":"response to signal involved in G2/M transition size control checkpoint","type":"exact"}],"termid":"GO:0072452"}


id: GO:0090359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of abscisic acid biosynthetic process","termid":"GO:0010115"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"abscisic acid biosynthetic process","termid":"GO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"negative regulation of abscisic acid biosynthetic process","synonyms":[{"name":"negative regulation of abscisic acid biosynthesis","type":"exact"}],"termid":"GO:0090359"}


id: FYPO:0003802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in telomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at telomere during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation at telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003802"}


id: PBO:0002713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-ribose methyltransferase (predicted)","termid":"PBO:0002713"}


id: MONDO:0003229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphedema (obsolete MONDO:0003229)","termid":"MONDO:0003229","xrefs":{"Monarch":{"xref_id":"0003229"}}}


id: PBO:0045394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 2 pseudogene 1","termid":"PBO:0045394"}


id: FYPO:0002997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of DNA replication during the mitotic cell cycle is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of DNA replication","termid":"FYPO:0002995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal negative regulation of DNA replication during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal negative regulation of DNA replication during cellular response to MMS","type":"exact"},{"name":"normal negative regulation of DNA replication during cellular response to methyl methanesulphonate","type":"exact"},{"name":"normal negative regulation of nuclear cell cycle DNA replication during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002997"}


id: PBO:0030736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G2_phase_during_nitrogen_starvation","termid":"PBO:0030736"}


id: GO:0032007
data:
  {"annotated_genes":["SJAG_02231","SJAG_04249","SJAG_05346","SJAG_00209","SJAG_00457","SJAG_03974","SJAG_01983","SJAG_03355","SJAG_00991","SJAG_03072","SJAG_00875","SJAG_03089","SJAG_00289","SJAG_04910","SJAG_03799","SJAG_00169","SJAG_03486","SJAG_00824","SJAG_03678","SJAG_02765","SJAG_03501","SJAG_01142","SJAG_01184","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72927],"is_not":false,"summary":null,"term":"GO:0032007"},{"annotations":[87783,104893,109020,73393,112903,79726,116784,113719,117779,106905,93098,101207,95854,102763,114323,99334,115871,109423,98635,116225,117971,73365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[116016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00289":null,"SJAG_00457":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03799":null,"SJAG_03974":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04910":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of TOR signaling pathway","type":"exact"},{"name":"down-regulation of TOR signaling pathway","type":"exact"},{"name":"downregulation of TOR signaling pathway","type":"exact"},{"name":"inhibition of TOR signaling pathway","type":"narrow"},{"name":"negative regulation of TOR signaling cascade","type":"related"},{"name":"negative regulation of TOR signaling pathway","type":"exact"},{"name":"negative regulation of TOR signalling pathway","type":"exact"},{"name":"negative regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"negative regulation of target of rapamycin signalling pathway","type":"exact"}],"termid":"GO:0032007","terms_by_termid":{"GO:0032007":null,"GO:1903940":null,"GO:1904262":null}}


id: GO:0050746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipoprotein metabolic process","synonyms":[{"name":"regulation of lipoprotein metabolism","type":"exact"}],"termid":"GO:0050746"}


id: MONDO:0012714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"autosomal recessive titinopathy","termid":"MONDO:0100493"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025","MONDO:0005267","MONDO:0002320"],"is_obsolete":false,"name":"early-onset myopathy with fatal cardiomyopathy","secondary_identifiers":["SCTID:702343002","MEDGEN:435983","Orphanet:289377","UMLS:C2673677","OMIM:611705","DOID:0081341","GARD:17324","MESH:C567129"],"synonyms":[{"name":"EOMFC","type":"related"},{"name":"SALMY","type":"related"},{"name":"Salih myopathy","type":"exact"},{"name":"myopathy, early-onset, with fatal cardiomyopathy","type":"related"}],"termid":"MONDO:0012714","xrefs":{"Monarch":{"xref_id":"0012714"}}}


id: MONDO:0017204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toxic maculopathy due to antimalarial drugs is a rare, acquired eye disease, due to long-term exposure to chloroquinine (CQ) or hydrochloroquinine (HCQ), characterized by a slowly progressive, usually non-reversible, development of bilateral atrophic bull's-eye maculopathy (progressive loss of central vision acuity, reduced color vision and central scotoma), which in severe cases can spread over the entire fundus, leading to widespread retinal atrophy and visual loss.","definition_xrefs":["Orphanet:279894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"toxic maculopathy due to antimalarial drugs","secondary_identifiers":["MEDGEN:1636117","SCTID:763621004","ICD10CM:H35.3","UMLS:C4706522"],"termid":"MONDO:0017204","xrefs":{"Monarch":{"xref_id":"0017204"}}}


id: GO:0052867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidyl-1D-myo-inositol 1,4,5-trisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 1,4-bisphosphate + phosphate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol trisphosphate phosphatase activity","termid":"GO:0034594"},{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 5-phosphatase activity","termid":"GO:0034595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-1,4,5-trisphosphate 5-phosphatase activity","synonyms":[{"name":"PtdIns(1,4,5)P(3) phosphatase activity","type":"broad"},{"name":"PtdIns(1,4,5)P3 phosphatase activity","type":"broad"},{"name":"phosphatidyl-myo-inositol-1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"phosphatidylinositol 1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"phosphatidylinositol-trisphosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphomonoesterase activity","type":"broad"}],"termid":"GO:0052867"}


id: FYPO:0000864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromeric regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","synonyms":[{"name":"abnormal centromeric histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3 K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 trimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me3 at centromere during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 trimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000864"}


id: PBO:0049492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 2","termid":"PBO:0049492"}


id: PBO:0084393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; forms heteroheptameric complex (with Lsm2p, Lsm3p, Lsm4p, Lsm5p, Lsm6p, and Lsm7p) that is part of spliceosomal U6 snRNP and is also implicated in processing of pre-tRNA, pre-snoRNA, and pre-rRNA","termid":"PBO:0084393"}


id: PBO:0034327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_during_or_after","termid":"PBO:0034327"}


id: GO:1990584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of accessory proteins (cardiac troponin T, cardiac troponin I and cardiac troponin C) found associated with actin in cardiac muscle thin filaments; involved in calcium regulation important for muscle contraction.","definition_xrefs":["GOC:ame","PMID:12840750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"troponin complex","termid":"GO:0005861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"cardiac Troponin complex","synonyms":[{"name":"cTnC:cTnI:cTnT","type":"related"}],"termid":"GO:1990584"}


id: MONDO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the ethmoid sinus.","direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"ethmoidal sinus neoplasm","termid":"MONDO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ethmoid sinus cancer","secondary_identifiers":["NCIT:C3541","UMLS:C0153477","ICD10CM:C31.1","ICD9:160.3","MEDGEN:102272","SCTID:363426009","DOID:1363"],"synonyms":[{"name":"cancer of ethmoid sinus","type":"exact"},{"name":"ethmoid sinus cancer","type":"exact"},{"name":"malignant ethmoid sinus neoplasm","type":"exact"},{"name":"malignant ethmoid sinus tumor","type":"exact"},{"name":"malignant ethmoid sinus tumour","type":"exact"},{"name":"malignant ethmoidal sinus neoplasm","type":"exact"},{"name":"malignant ethmoidal sinus tumor","type":"exact"},{"name":"malignant ethmoidal sinus tumour","type":"exact"},{"name":"malignant neoplasm of ethmoid sinus","type":"exact"},{"name":"malignant neoplasm of ethmoidal sinus","type":"exact"},{"name":"malignant neoplasm of the ethmoid sinus","type":"exact"},{"name":"malignant neoplasm of the ethmoidal sinus","type":"exact"},{"name":"malignant tumor of ethmoid sinus","type":"exact"},{"name":"malignant tumor of ethmoidal sinus","type":"exact"},{"name":"malignant tumor of the ethmoid sinus","type":"exact"},{"name":"malignant tumor of the ethmoidal sinus","type":"exact"},{"name":"malignant tumour of ethmoid sinus","type":"exact"},{"name":"malignant tumour of ethmoidal sinus","type":"exact"},{"name":"malignant tumour of the ethmoid sinus","type":"exact"},{"name":"malignant tumour of the ethmoidal sinus","type":"exact"}],"termid":"MONDO:0001763","xrefs":{"Monarch":{"xref_id":"0001763"}}}


id: PBO:0048517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF antisense RNA 1","termid":"PBO:0048517"}


id: PBO:0024805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables","termid":"PBO:0024805"}


id: SO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a vault RNA.","definition_xrefs":["PMID:22926522","PMID:30773316","PMID:22058117","PMID:19298825","PMID:9535882","PMID:19491402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault_RNA_gene","termid":"SO:0002358"}


id: PBO:0029855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_at_centromere_outer_repeat","termid":"PBO:0029855"}


id: MONDO:0859318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 1","termid":"MONDO:0019161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism, type IB3, autosomal recessive","secondary_identifiers":["MEDGEN:1824029","UMLS:C5774256","OMIM:620126"],"termid":"MONDO:0859318","xrefs":{"Monarch":{"xref_id":"0859318"}}}


id: GO:0047207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->2)-beta-D-fructosyl](n) + [(1->2)-beta-D-fructosyl](m) = [(1->2)-beta-D-fructosyl](n+1) + [(1->2)-beta-D-fructosyl](m-1).","definition_xrefs":["MetaCyc:2.4.1.100-RXN","EC:2.4.1.100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosyltransferase activity","termid":"GO:0050738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"1,2-beta-fructan 1F-fructosyltransferase activity","synonyms":[{"name":"1,2-beta-D-fructan 1(F)-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan 1F-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan:1,2-beta-D-fructan 1(F)-beta-D-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-D-fructan:1,2-beta-D-fructan 1F-beta-D-fructosyltransferase activity","type":"related"},{"name":"1,2-beta-fructan 1(F)-fructosyltransferase activity","type":"related"},{"name":"2,1-beta-D-fructan:2,1-beta-D-fructan 1-beta-D-fructosyltransferase activity","type":"related"},{"name":"2,1-fructan:2,1-fructan 1-fructosyltransferase activity","type":"related"},{"name":"FFT activity","type":"related"},{"name":"fructan:fructan fructosyl transferase activity","type":"related"}],"termid":"GO:0047207"}


id: PBO:0080901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1","termid":"PBO:0080901"}


id: PBO:0049185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grainyhead like transcription factor 2","termid":"PBO:0049185"}


id: MONDO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vagus nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vagus nerve disorder","secondary_identifiers":["UMLS:C0152179","ICD9:352.3","MEDGEN:101824","DOID:12491","NCIT:C27591","SCTID:73765005","MESH:D020421"],"synonyms":[{"name":"Vagus nerve disorder","type":"exact"},{"name":"disease of vagus nerve","type":"exact"},{"name":"disease or disorder of vagus nerve","type":"exact"},{"name":"disorder of pneumogastric [10th] nerve","type":"exact"},{"name":"disorder of vagal nerve","type":"exact"},{"name":"disorder of vagus nerve","type":"exact"},{"name":"vagus nerve disease","type":"exact"},{"name":"vagus nerve disease or disorder","type":"exact"}],"termid":"MONDO:0001535","xrefs":{"Monarch":{"xref_id":"0001535"}}}


id: PBO:0059525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded light strand origin of replication","termid":"PBO:0059525"}


id: GO:0035770
data:
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id: PBO:0049866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase, POLQ like","termid":"PBO:0049866"}


id: MONDO:0800353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type Ibb","secondary_identifiers":["UMLS:C4693133","MEDGEN:1637983"],"synonyms":[{"name":"CDG1BB","type":"exact"}],"termid":"MONDO:0800353","xrefs":{"Monarch":{"xref_id":"0800353"}}}


id: PBO:0027702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolar_chromatin_organization","termid":"PBO:0027702"}


id: GO:0047094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NAD(P)H + 3-hydroxyphenylacetate = H2O + NAD(P)+ + homogentisate.","definition_xrefs":["EC:1.14.13.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-hydroxyphenylacetate 6-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.63-RXN"],"synonyms":[{"name":"3-hydroxyphenylacetate 6-monooxygenase activity","type":"related"},{"name":"3-hydroxyphenylacetate,NAD(P)H:oxygen oxidoreductase (6-hydroxylating)","type":"related"}],"termid":"GO:0047094"}


id: MONDO:0004298
data:
  {"annotated_genes":["SJAG_03453","SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86819,86818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"}]},"cv_name":"mondo","definition":"A disease involving the stomach.","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02261":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"stomach disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:537.89","DOID:76","MEDGEN:21329","NCIT:C26886","SCTID:29384001","ICD9:537.9","UMLS:C0038354","EFO:0009608","MESH:D013272"],"synonyms":[{"name":"disease of stomach","type":"exact"},{"name":"disease or disorder of stomach","type":"exact"},{"name":"disorder of stomach","type":"exact"},{"name":"gastric disease","type":"related"},{"name":"gastropathy","type":"exact"},{"name":"stomach disease","type":"exact"},{"name":"stomach disease or disorder","type":"exact"},{"name":"stomach disorder","type":"exact"}],"termid":"MONDO:0004298","terms_by_termid":{"MONDO:0001056":null},"xrefs":{"Monarch":{"xref_id":"0004298"}}}


id: MONDO:0005662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection by parasites of the genus balantidium. The presence of Balantidium in the large intestine leads to diarrhea; dysentery; and occasionally ulcer.","definition_xrefs":["MESH:D001447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"Ciliophora infectious disease","termid":"MONDO:0005704"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"balantidiasis","secondary_identifiers":["NCIT:C84583","UMLS:C0004692","GARD:809","icd11.foundation:2090337975","EFO:0007163","ICD9:007.0","NORD:833","DOID:12386","ICD10CM:A07.0","MedDRA:10004080","MEDGEN:2540","Orphanet:1223","SCTID:57725006"],"synonyms":[{"name":"B coli infection","type":"related"},{"name":"Balantidiases","type":"related"},{"name":"Balantidium coli infection","type":"related"},{"name":"Human balantidiasis","type":"related"},{"name":"balantidiosis","type":"exact"},{"name":"ciliary dysentery","type":"exact"},{"name":"large-intestinal infection with Balantidium coli","type":"related"}],"termid":"MONDO:0005662","xrefs":{"Monarch":{"xref_id":"0005662"}}}


id: MONDO:0957954
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 14","secondary_identifiers":["OMIM:620602","MEDGEN:1851480","UMLS:C5882718"],"termid":"MONDO:0957954","xrefs":{"Monarch":{"xref_id":"0957954"}}}


id: FYPO:0001320
data:
  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phenotype","references_by_uniquename":{"PMID:21802294":null,"PMID:22300943":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:24699070":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27059155":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33495454":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_03783","SJAG_03048","SJAG_03351","SJAG_03143","SJAG_03453","SJAG_01794","SJAG_03575","SJAG_03581","SJAG_00514","SJAG_01906","SJAG_03449","SJAG_02592","SJAG_02819","SJAG_02796","SJAG_01745","SJAG_01374","SJAG_03940","SJAG_04312","SJAG_01050","SJAG_00426","SJAG_04703","SJAG_03596","SJAG_04280","SJAG_01956","SJAG_04332","SJAG_01242","SJAG_01330","SJAG_03444","SJAG_00409","SJAG_04522","SJAG_03689","SJAG_00610","SJAG_00266","SJAG_01143","SJAG_04464","SJAG_00118","SJAG_05207","SJAG_02252","SJAG_03891","SJAG_04883","SJAG_03892","SJAG_01834","SJAG_03250","SJAG_04284","SJAG_02392","SJAG_04489","SJAG_02013","SJAG_02763","SJAG_00028","SJAG_01787","SJAG_04551","SJAG_04697"],"single_locus_genotype_uniquenames":["ace2delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","gpd1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","scd1delta","pom152delta","rga6delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","man1delta","vps24delta","sty1delta","dcr1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","agn1delta","nup132delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","vps32delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","did4delta","pyp1delta","ras1delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","nup61delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","for3delta","gms1delta","lem2delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","pka1delta","alx1delta","mid2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","sep1delta","rga4delta","pck1delta","ptp4delta","mad2delta","scd2delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","nur1delta","gef1delta","efc25delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","ned1delta","atf1delta","pmk1delta","vps4delta","pom1delta","pck2delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell phenotype during vegetative growth","type":"exact"},{"name":"fission yeast vegetative cell phenotype","type":"exact"},{"name":"vegetative cell phenotype during mitotic cell cycle","type":"related"},{"name":"vegetative cell phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001320","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000118":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000356":null,"FYPO:0000595":null,"FYPO:0000596":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000644":null,"FYPO:0000648":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0000731":null,"FYPO:0000815":null,"FYPO:0001007":null,"FYPO:0001038":null,"FYPO:0001122":null,"FYPO:0001132":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001489":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001838":null,"FYPO:0001877":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002033":null,"FYPO:0002227":null,"FYPO:0002380":null,"FYPO:0002870":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003751":null,"FYPO:0003779":null,"FYPO:0003780":null,"FYPO:0003946":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0004105":null,"FYPO:0004165":null,"FYPO:0004205":null,"FYPO:0004295":null,"FYPO:0004318":null,"FYPO:0004573":null,"FYPO:0004683":null,"FYPO:0004695":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0005503":null,"FYPO:0005957":null,"FYPO:0006433":null,"FYPO:0006557":null,"FYPO:0006616":null,"FYPO:0006989":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007701":null,"FYPO:0007770":null,"FYPO:0007771":null,"FYPO:0007772":null,"FYPO:0007783":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0003270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell contributing to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling involved in heart development","termid":"GO:0061314"},{"relation_name":"part_of","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"Notch signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"related"},{"name":"Notch signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003270"}


id: GO:0031668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to extracellular stimulus (obsolete GO:0031668)","termid":"GO:0031668"}


id: PBO:0082739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; essential for mitotic growth; RSC6 has a paralog, SNF12, that arose from the whole genome duplication","termid":"PBO:0082739"}


id: GO:1904764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a chaperone-mediated autophagy translocation complex into its constituent components.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:18644871","GOC:pad","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex disassembly","synonyms":[{"name":"CMA receptor complex disassembly","type":"related"},{"name":"CMA translocation complex disassembly","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex disassembly","type":"related"}],"termid":"GO:1904764"}


id: GO:0018560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-sulfocatechol + O2 = 3-sulfomuconate.","definition_xrefs":["UM-BBD_reactionID:r0581"],"gene_count":0,"genotype_count":0,"name":"obsolete protocatechuate 3,4-dioxygenase type II activity (obsolete GO:0018560)","termid":"GO:0018560"}


id: GO:0047967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycyrrhizate + H2O = 2-(beta-D-glucuronosyl)-D-glucuronate + glycyrrhetinate.","definition_xrefs":["EC:3.2.1.128","RHEA:17369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"glycyrrhizinate beta-glucuronidase activity","secondary_identifiers":["MetaCyc:GLYCYRRHIZINATE-BETA-GLUCURONIDASE-RXN","KEGG_REACTION:R03906"],"synonyms":[{"name":"glycyrrhizin beta-hydrolase activity","type":"related"},{"name":"glycyrrhizin hydrolase activity","type":"related"},{"name":"glycyrrhizinate b-glucuronidase activity","type":"exact"},{"name":"glycyrrhizinate glucuronosylhydrolase activity","type":"related"},{"name":"glycyrrhizinic acid hydrolase activity","type":"related"}],"termid":"GO:0047967"}


id: MONDO:0017297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic lymphocytic inflammation with pontine perivascular enhancement responsive to steroids","secondary_identifiers":["Orphanet:284448","icd11.foundation:913443626","UMLS:C3854437","MEDGEN:1433964","GARD:10779"],"synonyms":[{"name":"CLIPPERS","type":"exact"},{"name":"chronic lymphocytic inflammation with pontine perivascular enhancement responsive to steroids","type":"exact"}],"termid":"MONDO:0017297","xrefs":{"Monarch":{"xref_id":"0017297"}}}


id: PBO:0039911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 10","termid":"PBO:0039911"}


id: PBO:0027526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ribosomal_S6_protein_phosphorylation","termid":"PBO:0027526"}


id: GO:0140582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by extracellular cAMP binding to its receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:9578623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating G protein-coupled cAMP receptor signaling pathway","synonyms":[{"name":"extracellular cAMP signaling pathway","type":"exact"}],"termid":"GO:0140582"}


id: GO:0004130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ferrocytochrome c + hydrogen peroxide = 2 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.11.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cytochrome-c peroxidase activity","secondary_identifiers":["MetaCyc:CYTOCHROME-C-PEROXIDASE-RXN","RHEA:16581"],"synonyms":[{"name":"apocytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c-551 peroxidase activity","type":"related"},{"name":"cytochrome c-H2O oxidoreductase activity","type":"related"},{"name":"cytochrome peroxidase activity","type":"related"},{"name":"ferrocytochrome-c:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"mesocytochrome c peroxidase azide","type":"related"},{"name":"mesocytochrome c peroxidase cyanate","type":"related"},{"name":"mesocytochrome c peroxidase cyanide","type":"related"}],"termid":"GO:0004130"}


id: SO:0000567
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome may be generated by recombination between two inversions; presumed to have a deficiency or duplication at each end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid_chromosome","termid":"SO:0000550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_aneuploid_chromosome","synonyms":[{"name":"inversion derived aneuploid chromosome","type":"exact"}],"termid":"SO:0000567"}


id: PBO:0041612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin binding protein 1","termid":"PBO:0041612"}


id: FYPO:0006983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the termination of RNA transcription RNA polymerase III from a DNA template is abnormal.","definition_xrefs":["GO:0006386","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase III transcription","synonyms":[{"name":"abnormal RNA polymerase III transcription termination","type":"exact"},{"name":"abnormal termination of RNA polymerase III transcription during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase III transcription during vegetative growth","type":"exact"},{"name":"abnormal transcription termination from Pol III promoter","type":"exact"},{"name":"abnormal transcription termination from RNA polymerase III promoter","type":"exact"}],"termid":"FYPO:0006983"}


id: PBO:0056581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCTS family member 2","termid":"PBO:0056581"}


id: PBO:0078174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-5","termid":"PBO:0078174"}


id: MONDO:0020011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare headache disorder.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare headache disorder (obsolete MONDO:0020011)","secondary_identifiers":["Orphanet:98022"],"synonyms":[{"name":"rare headache","type":"exact"},{"name":"rare headache disorder","type":"exact"}],"termid":"MONDO:0020011","xrefs":{"Monarch":{"xref_id":"0020011"}}}


id: GO:0106172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a COPI-coated endocytic vesicle.","definition_xrefs":["GOC:pde","PMID:29535154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"COPI-coated vesicle","termid":"GO:0030137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"COPI-coated vesicle lumen","termid":"GO:0106172"}


id: PBO:0038283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotype_comment","termid":"PBO:0038283"}


id: PBO:0082328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the ATP-binding cassette (ABC) family; involved in 40S and 60S ribosome biogenesis, has similarity to Gcn20p; important for disaggregation of ordered and disordered aggregates; shuttles from nucleus to cytoplasm, physically interacts with Tif6p, Lsg1p; human homolog ABCF2 can complement yeast ARB1 mutant","termid":"PBO:0082328"}


id: MONDO:1012399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anal sac gland carcinoma, non-human animal","termid":"MONDO:1011817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal sac gland carcinoma, dog","secondary_identifiers":["OMIA:001500-9615"],"termid":"MONDO:1012399","xrefs":{"Monarch":{"xref_id":"1012399"}}}


id: PBO:0051687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INKA2 antisense RNA 1","termid":"PBO:0051687"}


id: PBO:0042373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 receptor 1","termid":"PBO:0042373"}


id: MONDO:1012736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any skeletal dysplasia that occurs in dogs due to a mutation in the COL11A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, COL11A2-related, dog","secondary_identifiers":["OMIA:001772-9615"],"synonyms":[{"name":"SD2","type":"exact"},{"name":"skeletal dysplasia 2, COL11A2-related, dog","type":"exact"},{"name":"skeletal dysplasia 2, dog","type":"related"}],"termid":"MONDO:1012736","xrefs":{"Monarch":{"xref_id":"1012736"}}}


id: PBO:0040061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 5 like","termid":"PBO:0040061"}


id: MONDO:0020152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare eyelid malformation (obsolete MONDO:0020152)","secondary_identifiers":["Orphanet:98561"],"synonyms":[{"name":"eyelid malformation","type":"related"}],"termid":"MONDO:0020152","xrefs":{"Monarch":{"xref_id":"0020152"}}}


id: FYPO:0003942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of m7G(5')pppN diphosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal m7G(5')pppN diphosphatase activity","synonyms":[{"name":"normal mRNA decapping activity","type":"related"}],"termid":"FYPO:0003942"}


id: PBO:0028043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_depolymerization_at_plus_end_at_cell_tip","termid":"PBO:0028043"}


id: PBO:0116276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic delta 1-pyrroline-5-carboxylate reductase; catalyzes the last step in proline biosynthesis","termid":"PBO:0116276"}


id: GO:2001226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chloride transport.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic anion transport","termid":"GO:1903792"},{"relation_name":"is_a","term_name":"regulation of chloride transport","termid":"GO:2001225"},{"relation_name":"negatively_regulates","term_name":"chloride transport","termid":"GO:0006821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of chloride transport","termid":"GO:2001226"}


id: GO:0006097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"glyoxylate metabolic process","termid":"GO:0046487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glyoxylate cycle","secondary_identifiers":["Wikipedia:Glyoxylate_cycle","MetaCyc:GLYOXYLATE-BYPASS"],"synonyms":[{"name":"glyoxylate bypass","type":"exact"}],"termid":"GO:0006097"}


id: MONDO:0005588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation and ulceration of the oral mucosa as a result of chemotherapy treatment.","definition_xrefs":["EFO:0006313"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disease","termid":"MONDO:0000001"},{"relation_name":"is_a","term_name":"stomatitis","termid":"MONDO:0004842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemotherapy-induced oral mucositis","secondary_identifiers":["UMLS:C2887631","MEDGEN:853868"],"termid":"MONDO:0005588","xrefs":{"Monarch":{"xref_id":"0005588"}}}


id: PBO:0053565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 578","termid":"PBO:0053565"}


id: MONDO:0011819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 19 (SCA19) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by mild cerebellar ataxia, cognitive impairment, low scores on the Wisconsin Card Sorting Test measuring executive function, myoclonus, and postural tremor.","definition_xrefs":["Orphanet:98772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 19/22","secondary_identifiers":["GARD:12365","DOID:0050970","SCTID:719251009","UMLS:C1846367","MEDGEN:339504","MESH:C537198","MESH:C542540","OMIM:607346","NCIT:C163756"],"synonyms":[{"name":"SCA19","type":"related"},{"name":"SCA19/22","type":"exact"},{"name":"spinocerebellar ataxia 19","type":"related"},{"name":"spinocerebellar ataxia 19 and 22","type":"related"},{"name":"spinocerebellar ataxia 22","type":"related"},{"name":"spinocerebellar ataxia type 19","type":"exact"}],"termid":"MONDO:0011819","xrefs":{"Monarch":{"xref_id":"0011819"}}}


id: GO:1902331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA strand elongation that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA strand elongation involved in bacterial-type DNA replication (obsolete GO:1902331)","termid":"GO:1902331"}


id: MONDO:1010719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperphosphatemia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphosphatemia, non-human animal","termid":"MONDO:1010110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperphosphatemia, cattle","secondary_identifiers":["OMIA:002052-9913"],"termid":"MONDO:1010719","xrefs":{"Monarch":{"xref_id":"1010719"}}}


id: PBO:0066391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 1","termid":"PBO:0066391"}


id: PBO:0073374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 4B, pseudogene","termid":"PBO:0073374"}


id: PBO:0083331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF YER137C","termid":"PBO:0083331"}


id: MONDO:0005144
data:
  {"annotated_genes":["SJAG_03170","SJAG_07000","SJAG_03598","SJAG_04178","SJAG_02242","SJAG_03923","SJAG_02289","SJAG_04387","SJAG_01317","SJAG_04489","SJAG_02509","SJAG_00053","SJAG_03345","SJAG_00668","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[87046,85016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[86548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[86659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[85423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[85169,85170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[86283,86284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[86411,86410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[86515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[85097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[87036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"}]},"cv_name":"mondo","definition":"An instance of amyotrophic lateral sclerosis that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis","termid":"MONDO:0004976"},{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00668":null,"SJAG_01317":null,"SJAG_02242":null,"SJAG_02289":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03598":null,"SJAG_03923":null,"SJAG_04178":null,"SJAG_04387":null,"SJAG_04489":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"familial amyotrophic lateral sclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1642547","EFO:0001356","OMIMPS:105400","UMLS:C4551993"],"synonyms":[{"name":"hereditary amyotrophic lateral sclerosis","type":"exact"}],"termid":"MONDO:0005144","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008458":null,"MONDO:0010459":null,"MONDO:0010936":null,"MONDO:0011223":null,"MONDO:0012077":null,"MONDO:0012945":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0014531":null,"MONDO:0859529":null},"xrefs":{"Monarch":{"xref_id":"0005144"}}}


id: PBO:0067443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 565, pseudogene","termid":"PBO:0067443"}


id: GO:0000379
data:
  {"annotated_genes":["SJAG_04907","SJAG_03328","SJAG_01260","SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71136,72811,73658,78766],"is_not":false,"summary":null,"term":"GO:0000379"}]},"cv_name":"biological_process","definition":"RNA processing that begins when the tertiary structure of a tRNA type intron is recognized, and ends when the endonucleolytic cleavage of the RNA at both the 5' and 3' splice sites occurs.","definition_xrefs":["GOC:mah","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA-type intron splice site recognition and cleavage","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000379","terms_by_termid":{"GO:0000379":null}}


id: PBO:0038883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 9","termid":"PBO:0038883"}


id: PR:000027897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pap1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:15165244","PomBase:MAH","PMID:1899230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1-like transcription factor","synonyms":[{"name":"CAF3","type":"related"},{"name":"Caffeine resistance protein 3","type":"exact"},{"name":"pap1","type":"exact"}],"termid":"PR:000027897"}


id: PBO:0083217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene ARO9/YHR137W; identified by gene-trapping, expression analysis, and genome-wide homology searching","termid":"PBO:0083217"}


id: MONDO:0016907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 8q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the long arm (q) of chromosome 8. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 8q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 8","termid":"MONDO:0016873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 8","secondary_identifiers":["MESH:C537828","Orphanet:262065","MEDGEN:208638","UMLS:C0795828","icd11.foundation:653068448","GARD:3770"],"synonyms":[{"name":"8q deletion","type":"related"},{"name":"8q monosomy","type":"related"},{"name":"chromosome 8q deletion","type":"related"},{"name":"deletion 8q","type":"related"},{"name":"monosomy 8q","type":"related"},{"name":"partial deletion of chromosome 8q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 8","type":"exact"},{"name":"partial monosomy 8q","type":"related"},{"name":"partial monosomy of chromosome 8q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 8","type":"exact"}],"termid":"MONDO:0016907","xrefs":{"Monarch":{"xref_id":"0016907"}}}


id: PBO:0069517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 786, pseudogene","termid":"PBO:0069517"}


id: GO:0030182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation","termid":"GO:0030182"}


id: GO:0071341
data:
  {"annotated_genes":["SJAG_00228","SJAG_02169","SJAG_01665","SJAG_00279","SJAG_03596","SJAG_01456","SJAG_04486","SJAG_00807","SJAG_03703","SJAG_04280","SJAG_03602","SJAG_01889","SJAG_05290","SJAG_03564","SJAG_00773","SJAG_01143","SJAG_02368","SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88030,88712,90480,92084,92348,93622,96074,97779,100453,101015,104937,105959,116770,117613],"is_not":false,"summary":null,"term":"GO:0071341"},{"annotations":[98179,98754,103236,115743],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110115"}]},"cv_name":"cellular_component","definition":"A component of the cell division site that contains the mid1, cdr2, wee1, klp8, and blt1 proteins, and is involved in contractile ring localization. Medial cortical node complexes appear as cortical dots in the middle of the cell during interphase, and function to recruit other ring components in early mitosis.","definition_xrefs":["PMID:19959363","GOC:vw","PMID:19474789","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"medial cortex","termid":"GO:0031097"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00279":null,"SJAG_00773":null,"SJAG_00807":null,"SJAG_01143":null,"SJAG_01456":null,"SJAG_01665":null,"SJAG_01889":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_03564":null,"SJAG_03596":null,"SJAG_03602":null,"SJAG_03703":null,"SJAG_04280":null,"SJAG_04486":null,"SJAG_04498":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mid1p medial cortical dot","type":"exact"},{"name":"midsome","type":"exact"}],"termid":"GO:0071341","terms_by_termid":{"GO:0071341":null,"GO:0110115":null}}


id: PR:P78965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutathione reductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR22912:SF27","OMA:SCHPO02853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.07","secondary_identifiers":["UniProtKB:P78965"],"synonyms":[{"name":"GR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GRase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GSR","type":"exact"}],"termid":"PR:P78965"}


id: SO:1000085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that causes a change in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000085 sequence_variation_affecting_level_of_transcript (obsolete SO:1000085)","synonyms":[{"name":"mutation affecting level of transcript","type":"related"},{"name":"sequence variation affecting level of transcript","type":"exact"}],"termid":"SO:1000085"}


id: MONDO:1010142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyoderma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoderma, non-human animal","secondary_identifiers":["OMIA:001877"],"termid":"MONDO:1010142","xrefs":{"Monarch":{"xref_id":"1010142"}}}


id: PBO:0086899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter, member of the sugar porter family; localizes to the vacuolar membrane; non-essential gene; upregulated by and required for tolerance to 4-Methylcyclohexane methanol; YBR241C has a paralog, VPS73, that arose from the whole genome duplication","termid":"PBO:0086899"}


id: PBO:0082414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional chorismate synthase and flavin reductase; catalyzes the conversion of 5-enolpyruvylshikimate 3-phosphate (EPSP) to form chorismate, which is a precursor to aromatic amino acids; protein abundance increases in response to DNA replication stress","termid":"PBO:0082414"}


id: MOD:01034
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a 4-nitrophenyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-nitrophenyl modified residue","synonyms":[{"name":"ONp","type":"exact"},{"name":"p-nitrophenyl","type":"exact"}],"termid":"MOD:01034"}


id: PBO:0063063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PANK2 antisense RNA 1","termid":"PBO:0063063"}


id: GO:0004630
data:
  {"annotated_genes":["SJAG_01519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74114],"is_not":false,"summary":null,"term":"GO:0004630"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate.","definition_xrefs":["EC:3.1.4.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"phospholipase D activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PHOSCHOL-RXN","Reactome:R-HSA-1483142","Reactome:R-HSA-2029471","RHEA:14445","Reactome:R-HSA-1483182"],"synonyms":[{"name":"choline phosphatase activity","type":"related"},{"name":"lecithinase D activity","type":"related"},{"name":"lipophosphodiesterase II activity","type":"related"},{"name":"phosphatidylcholine phosphatidohydrolase activity","type":"related"}],"termid":"GO:0004630","terms_by_termid":{"GO:0004630":null}}


id: PBO:0068526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 125, pseudogene","termid":"PBO:0068526"}


id: MONDO:0020222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with glaucoma as a major feature (obsolete MONDO:0020222)","secondary_identifiers":["Orphanet:98638"],"termid":"MONDO:0020222","xrefs":{"Monarch":{"xref_id":"0020222"}}}


id: PBO:0042888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 410","termid":"PBO:0042888"}


id: GO:0019657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Glycolytic fermentation resulting in the catabolism of glucose to propionate, yielding energy in the form of ATP; an alternative to the acrylate pathway to produce propionate.","definition_xrefs":["GOC:dph","GOC:nr","MetaCyc:P108-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate metabolic process","termid":"GO:0006105"},{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"},{"relation_name":"is_a","term_name":"pyruvate catabolic process","termid":"GO:0042867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"glycolytic fermentation to propionate","synonyms":[{"name":"succinate-propionate fermentation","type":"exact"}],"termid":"GO:0019657"}


id: GO:0003271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened contributing to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"},{"relation_name":"part_of","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"smoothened signaling pathway involved in regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"hedgehog signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"hh signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003271"}


id: PBO:0081637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 565","termid":"PBO:0081637"}


id: PBO:0071919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 4","termid":"PBO:0071919"}


id: MONDO:0010819
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85873,85874],"is_not":false,"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Stargardt disease","termid":"MONDO:0019353"},{"relation_name":"is_a","term_name":"ELOVL4-related maculopathy","termid":"MONDO:0700227"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Stargardt disease 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:333146","OMIM:600110","GARD:15314","MESH:C535805","UMLS:C1838644"],"synonyms":[{"name":"STGD3","type":"related"},{"name":"Stargardt disease 3","type":"exact"},{"name":"Stargardt disease type 3","type":"exact"},{"name":"Stargardt-like macular dystrophy, autosomal dominant","type":"related"},{"name":"macular dystrophy with flecks, type 3","type":"related"}],"termid":"MONDO:0010819","terms_by_termid":{"MONDO:0010819":null},"xrefs":{"Monarch":{"xref_id":"0010819"}}}


id: GO:0017052
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin-like growth factor binding protein (obsolete GO:0017052)","synonyms":[{"name":"insulin-like growth factor binding protein","type":"exact"}],"termid":"GO:0017052"}


id: MONDO:0016754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vestibular schwannoma (obsolete MONDO:0016754)","termid":"MONDO:0016754","xrefs":{"Monarch":{"xref_id":"0016754"}}}


id: MONDO:0015843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine hypoplasia","secondary_identifiers":["GARD:20184","icd11.foundation:1858530341","Orphanet:180139","MedDRA:10063146","UMLS:C0266399","MEDGEN:120575"],"termid":"MONDO:0015843","xrefs":{"Monarch":{"xref_id":"0015843"}}}


id: GO:0010541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin from the base towards the apex of an organ, including the shoot, leaf, primary root, or lateral root.","definition_xrefs":["PMID:10677441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"acropetal auxin transport","termid":"GO:0010541"}


id: GO:0006972
data:
  {"annotated_genes":["SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell.","definition_xrefs":["PMID:12142009","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyperosmotic response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HOG response","type":"exact"},{"name":"hypertonic response","type":"exact"},{"name":"response to hypertonicity","type":"exact"}],"termid":"GO:0006972","terms_by_termid":{"GO:0071474":null}}


id: MONDO:0006631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis of the foot generally affects the joint at the base of your big toe. It can cause your toe to: - become stiff over time, which can make it difficult and painful to walk – this is called hallux rigidus - become bent, which can lead to painful bunions (bony lumps at the base of your big toe) – this is called hallux valgus. Osteoarthritis of the mid-foot is also quite common, especially in older people, and may cause an obvious bony swelling (osteophyte) on the top of your mid-foot. Ankle osteoarthritis is least common and may cause your heel to move to an unusual angle.","definition_xrefs":["EFO:1000788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis","termid":"MONDO:0005178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, toe","secondary_identifiers":["UMLS:C0409929","MEDGEN:592722"],"termid":"MONDO:0006631","xrefs":{"Monarch":{"xref_id":"0006631"}}}


id: GO:0106027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a neuron, e.g. an axon, or a dendrite.","definition_xrefs":["PMID:11585923","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection organization","termid":"GO:0106027"}


id: MONDO:0003493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary thymic carcinoma, characterized by the presence of keratinizing or non-keratinizing malignant squamous cells. Approximately 10-20% of cases occur in combination with thymoma. The prognosis depends on the tumor stage and the degree of cellular differentiation.","definition_xrefs":["NCIT:C6455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"thymus squamous cell carcinoma","secondary_identifiers":["MEDGEN:234814","UMLS:C1336082","DOID:5530","EFO:1000579"],"synonyms":[{"name":"Thymus squamous cell carcinoma","type":"exact"},{"name":"epidermoid thymic carcinoma","type":"exact"},{"name":"squamous cell carcinoma of Thymus","type":"exact"},{"name":"squamous cell carcinoma of the Thymus","type":"exact"},{"name":"thymic squamous cell carcinoma","type":"exact"},{"name":"thymus squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003493","xrefs":{"Monarch":{"xref_id":"0003493"}}}


id: GO:0019132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of peptides after specific recognition of a C-terminal tripeptide, Xaa-Yaa-Zaa, in which Xaa is preferably Ala or Leu, Yaa is preferably Ala or Tyr, and Zaa is preferably Ala. Cleavage is at a variable distance from the C-terminus; a typical cleavage is -Ala-Ala-Arg-Ala-Ala-Lys-Glu-Asn-Tyr-Ala-Leu-Ala-Ala.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal processing peptidase activity (obsolete GO:0019132)","synonyms":[{"name":"C-terminal processing peptidase activity","type":"exact"},{"name":"CtpA gene product (Synechocystis sp.)","type":"related"},{"name":"Tsp protease","type":"narrow"},{"name":"photosystem II D1 protein processing peptidase","type":"narrow"},{"name":"protease Re","type":"related"},{"name":"tail-specific protease activity","type":"related"}],"termid":"GO:0019132"}


id: GO:1900468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:8056324","PMID:8614637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"},{"relation_name":"regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"regulation of phosphatidylserine anabolism","type":"exact"},{"name":"regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"regulation of phosphatidylserine formation","type":"exact"},{"name":"regulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900468"}


id: PBO:0056937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-2","termid":"PBO:0056937"}


id: MONDO:0800102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy, typically described as achromatopsia, caused by biallelic variants in the CNGA3 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"CNGA3-related retinopathy","synonyms":[{"name":"ACHM2","type":"narrow"},{"name":"CNGA3 achromatopsia","type":"narrow"},{"name":"CNGA3-related retinopathy","type":"exact"},{"name":"RMCH2","type":"narrow"},{"name":"achromatopsia 2","type":"narrow"},{"name":"achromatopsia caused by mutation in CNGA3","type":"narrow"},{"name":"achromatopsia type 2","type":"narrow"},{"name":"colorblindness, total","type":"related"},{"name":"rod monochromacy 2","type":"narrow"},{"name":"rod monochromatism 2","type":"narrow"}],"termid":"MONDO:0800102","xrefs":{"Monarch":{"xref_id":"0800102"}}}


id: PBO:0081364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 200","termid":"PBO:0081364"}


id: MOD:00430
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three methyl groups.","definition_xrefs":["PubMed:4304194","PubMed:7093227","PubMed:8453381","PubMed:6778808","Unimod:37","PubMed:12590383","PubMed:3145979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"trimethylated residue","synonyms":[{"name":"Me3Res","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:00430"}


id: MONDO:0005450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune disease (obsolete MONDO:0005450)","termid":"MONDO:0005450","xrefs":{"Monarch":{"xref_id":"0005450"}}}


id: GO:0043502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle adaptation","synonyms":[{"name":"regulation of muscle plasticity","type":"related"}],"termid":"GO:0043502"}


id: MONDO:0018295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with deafness as a major feature (obsolete MONDO:0018295)","secondary_identifiers":["Orphanet:371212"],"synonyms":[{"name":"CDG with deafness as a major feature","type":"exact"}],"termid":"MONDO:0018295","xrefs":{"Monarch":{"xref_id":"0018295"}}}


id: GO:0038183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by bile acid binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:36409000","GOC:signaling","PMID:12016314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"bile acid signaling pathway","termid":"GO:0038183"}


id: GO:1903011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone development.","definition_xrefs":["PMID:22510437","GOC:mr","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of bone development","termid":"GO:1903010"},{"relation_name":"negatively_regulates","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone development","synonyms":[{"name":"down regulation of bone development","type":"exact"},{"name":"down-regulation of bone development","type":"exact"},{"name":"downregulation of bone development","type":"exact"},{"name":"inhibition of bone development","type":"narrow"}],"termid":"GO:1903011"}


id: GO:0015858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nucleoside transport","termid":"GO:0015858"}


id: FYPO:0005769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing G-quartet (G4) motifs. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:27611590","PMID:25471935","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at G4 motif during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at G-quadruplex during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at G-quartet during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at G4 motif during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005769"}


id: MONDO:0007843
data:
  {"annotated_genes":["SJAG_00861"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85652],"is_not":false,"summary":null,"term":"MONDO:0007843"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kabuki syndrome","termid":"MONDO:0016512"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00861":null},"genotype_count":0,"is_obsolete":false,"name":"Kabuki syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:147920"],"synonyms":[{"name":"KABUK1","type":"related"},{"name":"KABUKI syndrome 1","type":"related"},{"name":"Kabuki make-Up syndrome","type":"related"},{"name":"Kabuki syndrome","type":"related"},{"name":"Kabuki syndrome 1","type":"exact"},{"name":"Kabuki syndrome type 1","type":"exact"},{"name":"Niikawa-Kuroki syndrome","type":"related"}],"termid":"MONDO:0007843","terms_by_termid":{"MONDO:0007843":null},"xrefs":{"Monarch":{"xref_id":"0007843"}}}


id: PBO:0111817
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT1 subfamily","termid":"PBO:0111817"}


id: GO:0006651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diacylglycerol, a glyceride in which any two of the R groups (positions not specified) are acyl groups while the remaining R group can be either H or an alkyl group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diacylglycerol metabolic process","termid":"GO:0046339"},{"relation_name":"is_a","term_name":"acylglycerol biosynthetic process","termid":"GO:0046463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"diacylglycerol biosynthetic process","synonyms":[{"name":"diacylglycerol anabolism","type":"exact"},{"name":"diacylglycerol biosynthesis","type":"exact"},{"name":"diacylglycerol formation","type":"exact"},{"name":"diacylglycerol synthesis","type":"exact"},{"name":"diglyceride biosynthesis","type":"exact"}],"termid":"GO:0006651"}


id: PBO:0063962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase like 1","termid":"PBO:0063962"}


id: SO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed transcript that does not contain a CDS that fullfills annotation criteria and not necessarily functionally non-coding.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene_processed_transcript","termid":"SO:0002111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_pseudogene_processed_transcript","synonyms":[{"name":"polymorphic pseudogene processed transcript","type":"exact"}],"termid":"SO:0002116"}


id: GO:0036366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The release of transforming growth factor beta 3 (TGF-beta3) from its latent state.","definition_xrefs":["PMID:12482908","GOC:sl","PMID:9170210"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta3 activation (obsolete GO:0036366)","synonyms":[{"name":"TGF-beta 3 activation","type":"exact"},{"name":"TGFB3 activation","type":"exact"},{"name":"TGFbeta 3 activation","type":"exact"}],"termid":"GO:0036366"}


id: PBO:0072660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 2","termid":"PBO:0072660"}


id: PBO:0112232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome-associated ubiquitin receptor, S. cerevisiae Rad23 homolog, Rhp23","termid":"PBO:0112232"}


id: GO:0052638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-butyrate + UDP-D-glucose = indole-3-butyryl-beta-1-D-glucose + UDP.","definition_xrefs":["RHEA:62708","MetaCyc:RXN-11655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"indole-3-butyrate beta-glucosyltransferase activity","synonyms":[{"name":"IBA-Glc synthetase activity","type":"exact"},{"name":"IBA-glucose synthase activity","type":"exact"},{"name":"IBAGlu synthase activity","type":"exact"},{"name":"UDP-glucose:(indol-3-yl)butyrate beta-D-glucosyltransferase activity","type":"exact"},{"name":"UDP-glucose:indol-3-ylbutyrate glucosyl-transferase activity","type":"exact"},{"name":"UDP-glucose:indol-3-ylbutyrate glucosyltransferase activity","type":"exact"},{"name":"UDPG-indol-3-ylbutyryl glucosyl transferase activity","type":"exact"},{"name":"UDPglucose:indole-3-butyrate beta-D-glucosyltransferase activity","type":"exact"},{"name":"indol-3-ylbutyrylglucose synthase activity","type":"exact"},{"name":"indole-3-butyric acid glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-indolebutyrate glucosyltransferase activity","type":"exact"}],"termid":"GO:0052638"}


id: MONDO:0700140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma of mesenchymal origin in a dog. It is the most common bone cancer in dogs, most often developing in the limbs of large or giant breed dogs. The morphologic and biologic behavior of canine osteosarcomas is similar to that of human osteosarcomas.","definition_xrefs":["NCIT:C120045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine sarcoma","termid":"MONDO:0700149"},{"relation_name":"is_a","term_name":"osteosarcoma, non-human animal","termid":"MONDO:1010212"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine osteosarcoma","secondary_identifiers":["OMIA:001441-9615"],"synonyms":[{"name":"osteosarcoma, dog","type":"exact"}],"termid":"MONDO:0700140","xrefs":{"Monarch":{"xref_id":"0700140"}}}


id: PBO:0031047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_acetylation","termid":"PBO:0031047"}


id: PBO:0060396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2","termid":"PBO:0060396"}


id: PBO:0005713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N7-)-methyltransferase subunit Trm82 (predicted)","termid":"PBO:0005713"}


id: PATO:0002318
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape constituting a transition between a rectangle and a circle; a closed curve, of which the circle and ellipse are special cases, whose parametric equation is x = a.cos2/rt, y = b.cos2/rt","definition_xrefs":["wiktionary:superellipse"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superelliptic","synonyms":[{"name":"Lamé curve","type":"exact"}],"termid":"PATO:0002318"}


id: GO:1901755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vitamin D3.","definition_xrefs":["GOC:TermGenie","GOC:yaf","Unipathway:UPA00955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D biosynthetic process","termid":"GO:0042368"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629","GO:0006766"],"is_obsolete":false,"name":"vitamin D3 biosynthetic process","synonyms":[{"name":"calciol anabolism","type":"exact"},{"name":"calciol biosynthesis","type":"exact"},{"name":"calciol biosynthetic process","type":"exact"},{"name":"calciol formation","type":"exact"},{"name":"calciol synthesis","type":"exact"},{"name":"cholecalciferol biosynthesis","type":"exact"},{"name":"cholecalciferol biosynthetic process","type":"exact"},{"name":"vitamin D3 anabolism","type":"exact"},{"name":"vitamin D3 biosynthesis","type":"exact"},{"name":"vitamin D3 formation","type":"exact"},{"name":"vitamin D3 synthesis","type":"exact"}],"termid":"GO:1901755"}


id: GO:1901707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to leptomycin B.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid binding","termid":"GO:0005504"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"leptomycin B binding","termid":"GO:1901707"}


id: PBO:0048343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 54","termid":"PBO:0048343"}


id: MONDO:0013497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Okt4 epitope deficiency","secondary_identifiers":["MEDGEN:462729","UMLS:C3151379","OMIM:613949"],"synonyms":[{"name":"Okt4 epitope deficiency","type":"exact"},{"name":"T4 epitope deficiency","type":"related"}],"termid":"MONDO:0013497","xrefs":{"Monarch":{"xref_id":"0013497"}}}


id: GO:0044718
data:
  {"annotated_genes":["SJAG_03667","SJAG_02834","SJAG_02735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61837,61946,68972],"is_not":false,"summary":null,"term":"GO:0044718"}]},"cv_name":"biological_process","definition":"The directed movement of siderophores, low molecular weight Fe(III)-chelating substances, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"},{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_03667":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"siderophore transmembrane transport","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"siderophore membrane transport","type":"exact"}],"termid":"GO:0044718","terms_by_termid":{"GO:0044718":null}}


id: GO:0045292
data:
  {"annotated_genes":["SJAG_04222","SJAG_05240","SJAG_03966","SJAG_01440","SJAG_02772","SJAG_04589","SJAG_04293","SJAG_00571","SJAG_02078","SJAG_02469","SJAG_00643","SJAG_03894","SJAG_03410","SJAG_02295","SJAG_05212","SJAG_04898","SJAG_01547","SJAG_00539","SJAG_00818","SJAG_05926","SJAG_03498","SJAG_04230","SJAG_02304","SJAG_00577","SJAG_04914","SJAG_00322","SJAG_01557","SJAG_02018","SJAG_04783","SJAG_04214","SJAG_02083","SJAG_03890","SJAG_04163","SJAG_01015","SJAG_00147","SJAG_02227","SJAG_03430","SJAG_02862","SJAG_04025","SJAG_03687","SJAG_05349","SJAG_03245","SJAG_02843","SJAG_03112","SJAG_03547","SJAG_04949","SJAG_02455","SJAG_02396","SJAG_04529","SJAG_02879","SJAG_04911","SJAG_04694","SJAG_01144","SJAG_01327","SJAG_05009","SJAG_02317","SJAG_01064","SJAG_04071","SJAG_03993","SJAG_01629","SJAG_04318","SJAG_02905","SJAG_00504","SJAG_01634","SJAG_00498","SJAG_00446","SJAG_03995","SJAG_01152","SJAG_00531","SJAG_01308","SJAG_03301","SJAG_01819","SJAG_03937","SJAG_03954","SJAG_00989","SJAG_01511","SJAG_02722","SJAG_03601","SJAG_02844","SJAG_01870","SJAG_01452","SJAG_03070","SJAG_05211","SJAG_00313","SJAG_01654","SJAG_03849","SJAG_02687","SJAG_00859","SJAG_04863","SJAG_01958","SJAG_03460","SJAG_00225","SJAG_03469","SJAG_03711","SJAG_00597","SJAG_02688","SJAG_01504","SJAG_00809","SJAG_04079","SJAG_04433","SJAG_00083","SJAG_04497","SJAG_05224","SJAG_03214","SJAG_01408","SJAG_00639","SJAG_01301","SJAG_00363","SJAG_03369","SJAG_04117","SJAG_01810","SJAG_01200","SJAG_03427","SJAG_00998","SJAG_16453","SJAG_02279","SJAG_00414","SJAG_02185","SJAG_02558","SJAG_00094","SJAG_05235","SJAG_00058","SJAG_01852","SJAG_03983","SJAG_01040","SJAG_03279","SJAG_00249","SJAG_01214","SJAG_00888","SJAG_05025","SJAG_03291","SJAG_01433","SJAG_03238","SJAG_04405","SJAG_00911","SJAG_05208","SJAG_01008","SJAG_02686","SJAG_03210","SJAG_00076"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59653,74823,78103,79031,87194,87539,88279,88750,91185,91563,91866,92432,92453,92655,92881,93356,94490,95095,95555,95708,95735,95969,96200,96597,97158,97432,100390,102165,102227,102458,102775,102959,104272,104434,104716,105252,106521,107398,107640,108624,109534,110263,111033,111277,112402,112913,113203,113584,114097,114103,114604,116620,116768,116963,117717,118290,118636,56982,57567,58081,59159,59169,61879,64317,64351,64439,65071,65149,66239,67035,67287,67739,70147,70184,70448,70918,71283,71558,71569,71929,71955,72494,72637,73025,73096,73748,73789,73818,73842,74020,74296,74445,74447,74858,75156,75190,75349,75573,75576,75732,75759,75764,76070,76398,76807,77145,77157,77223,77248,77518,77690,78122,78565,79011,79210,79599,79806,80069,91917,94946],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[117572],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[97591,94940,102300,113022,109819,91329,114989,112114,94687,102462,95360,93763,105640,110378,79321,110392],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[118154,89234],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905746"},{"annotations":[98324],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905744"}]},"cv_name":"biological_process","definition":"The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.","definition_xrefs":["PMID:18458335","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via 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cis splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear mRNA cis splicing, via U2-type spliceosome","type":"narrow"},{"name":"nuclear mRNA cis splicing, via spliceosome","type":"exact"},{"name":"splicing","type":"broad"}],"termid":"GO:0045292","terms_by_termid":{"GO:0000354":null,"GO:0000395":null,"GO:0045292":null,"GO:1905744":null,"GO:1905746":null}}


id: SO:0001543
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that affects the post transcriptional processing of a transcript with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_function_variant","termid":"SO:0001538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_processing_variant","synonyms":[{"name":"transcript processing variant","type":"exact"}],"termid":"SO:0001543"}


id: MONDO:0010639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngeal abductor paralysis-intellectual disability syndrome is characterized by congenital and permanent laryngeal abductor paralysis, associated, in the majority of cases, with intellectual deficit. It has been described in several families. X-linked inheritance is likely.","definition_xrefs":["Orphanet:2375"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal abductor paralysis-intellectual disability syndrome","secondary_identifiers":["GARD:16597","UMLS:C5886766","OMIM:308850","MEDGEN:1855824","SCTID:724178000"],"synonyms":[{"name":"Plott syndrome","type":"exact"},{"name":"laryngeal abductor paralysis","type":"related"},{"name":"vocal cord dysfunction, familial","type":"related"}],"termid":"MONDO:0010639","xrefs":{"Monarch":{"xref_id":"0010639"}}}


id: PBO:0016573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh6","termid":"PBO:0016573"}


id: PBO:0030608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_calcium_level","termid":"PBO:0030608"}


id: PBO:0091519
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae Hys2","termid":"PBO:0091519"}


id: GO:0052230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the directed movement of substances within the cell or cells of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of intracellular transport in other organism involved in symbiotic interaction (obsolete GO:0052230)","synonyms":[{"name":"modulation of intracellular trafficking in other organism","type":"exact"},{"name":"modulation of intracellular transport in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052230"}


id: PBO:0031740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mating_type_switching","termid":"PBO:0031740"}


id: MONDO:0002050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melancholy feeling of sadness and despair.","definition_xrefs":["NCIT:C2982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depressive disorder","secondary_identifiers":["DOID:1596","MEDGEN:4229","MFOMD:0000013","SCTID:35489007","UMLS:C0011581","MESH:D003866","ICD9:311","ICD10CM:F32"],"synonyms":[{"name":"depression","type":"exact"},{"name":"melancholia","type":"related"},{"name":"melancholias","type":"related"},{"name":"mental depression","type":"exact"},{"name":"syndrome, depressive","type":"related"},{"name":"syndromes, depressive","type":"related"}],"termid":"MONDO:0002050","xrefs":{"Monarch":{"xref_id":"0002050"}}}


id: PBO:0038415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_negatively_regulates_activity_of","termid":"PBO:0038415"}


id: GO:0045849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nurse cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nurse cell apoptotic process","termid":"GO:0045477"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"nurse cell apoptotic process","termid":"GO:0045476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nurse cell apoptotic process","synonyms":[{"name":"down regulation of nurse cell apoptosis","type":"exact"},{"name":"down-regulation of nurse cell apoptosis","type":"exact"},{"name":"downregulation of nurse cell apoptosis","type":"exact"},{"name":"inhibition of nurse cell apoptosis","type":"narrow"},{"name":"negative regulation of nurse cell apoptosis","type":"narrow"}],"termid":"GO:0045849"}


id: MONDO:0020240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A retinitis pigmentosa that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","secondary_identifiers":["Orphanet:98661"],"synonyms":[{"name":"syndrome associated with retinitis pigmentosa","type":"exact"},{"name":"syndromic retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0020240","xrefs":{"Monarch":{"xref_id":"0020240"}}}


id: PBO:0042412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 25B","termid":"PBO:0042412"}


id: PBO:0052796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 36","termid":"PBO:0052796"}


id: PBO:0067846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 148","termid":"PBO:0067846"}


id: GO:0140841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine.","definition_xrefs":["PMID:22605332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-acetylglucosaminyltransferase activity","termid":"GO:0097363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain O-GlcNAc transferase activity","termid":"GO:0140841"}


id: MONDO:0000999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pneumoconiosis (obsolete MONDO:0000999)","termid":"MONDO:0000999","xrefs":{"Monarch":{"xref_id":"0000999"}}}


id: PBO:0060898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuralized E3 ubiquitin protein ligase 1B","termid":"PBO:0060898"}


id: MONDO:0024561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitelliform macular dystrophy in which the cause of the disease is a mutation in the PRPH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult-onset foveomacular vitelliform dystrophy","termid":"MONDO:0011979"},{"relation_name":"is_a","term_name":"PRPH2-related retinopathy","termid":"MONDO:1040055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitelliform macular dystrophy 3","secondary_identifiers":["OMIM:608161"],"synonyms":[{"name":"PRPH2 vitelliform macular dystrophy","type":"exact"},{"name":"VMD3","type":"related"},{"name":"foveomacular dystrophy, adult-onset","type":"related"},{"name":"foveomacular dystrophy, adult-onset, with or without choroidal neovascularization","type":"related"},{"name":"macular dystrophy, vitelliform, 3","type":"related"},{"name":"vitelliform macular dystrophy caused by mutation in PRPH2","type":"exact"},{"name":"vitelliform macular dystrophy, adult-onset","type":"related"}],"termid":"MONDO:0024561","xrefs":{"Monarch":{"xref_id":"0024561"}}}


id: PBO:0004892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Rsm25 (predicted)","termid":"PBO:0004892"}


id: GO:0072493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the host cell endosome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell endosome","termid":"GO:0044174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endosome lumen","synonyms":[{"name":"host endosome lumen","type":"exact"}],"termid":"GO:0072493"}


id: PR:O74476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sal3 gene.","definition_xrefs":["UniProtKB:O74476","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit beta-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.03","synonyms":[{"name":"Spom972h-sal3","type":"exact"},{"name":"importin beta sal3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74476"}


id: MONDO:0008407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of desmin","termid":"MONDO:0016187"},{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurogenic scapuloperoneal syndrome, Kaeser type","secondary_identifiers":["OMIM:181400","DOID:0111551","GARD:10312","MEDGEN:356670","MESH:C566695","Orphanet:85146","UMLS:C1867005"],"synonyms":[{"name":"Kaeser syndrome","type":"exact"},{"name":"SCPNK","type":"related"},{"name":"scapuloperoneal syndrome, neurogenic type, of Kaeser","type":"related"},{"name":"scapuloperoneal syndrome, neurogenic, Kaeser type","type":"related"},{"name":"stark-Kaeser syndrome","type":"exact"}],"termid":"MONDO:0008407","xrefs":{"Monarch":{"xref_id":"0008407"}}}


id: PBO:0028937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_5-fluoroorotic_acid","termid":"PBO:0028937"}


id: PBO:0069917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1209, pseudogene","termid":"PBO:0069917"}


id: GO:2000465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycogen (starch) synthase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glycogen (starch) synthase activity","synonyms":[{"name":"regulation of UDP-glucose-glycogen glucosyltransferase activity","type":"exact"},{"name":"regulation of UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"regulation of UDP-glycogen synthase activity","type":"exact"},{"name":"regulation of UDPG-glycogen synthetase activity","type":"exact"},{"name":"regulation of UDPG-glycogen transglucosylase activity","type":"exact"},{"name":"regulation of UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"regulation of glycogen (starch) synthetase activity","type":"exact"},{"name":"regulation of uridine diphosphoglucose-glycogen glucosyltransferase activity","type":"exact"}],"termid":"GO:2000465"}


id: SO:0001002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 25S rRNA is an RNA component of the large subunit of cytosolic ribosomes most eukaryotes.","definition_xrefs":["PMID:2100998","PMID:15493135","RSC:cb"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_25S_gene","termid":"SO:0002242"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_25S_rRNA","synonyms":[{"name":"cytosolic 25S LSU rRNA","type":"exact"},{"name":"cytosolic 25S rRNA","type":"exact"},{"name":"cytosolic 25S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 25S","type":"exact"}],"termid":"SO:0001002"}


id: PBO:0086312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with role in regulation of MBF-specific transcription at Start; phosphorylated by Cln-Cdc28p kinases in vitro; unphosphorylated form binds Swi6p, which is required for Stb1p function; expression is cell-cycle regulated; STB1 has a paralog, YOL131W, that arose from the whole genome duplication","termid":"PBO:0086312"}


id: GO:0035470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of angiogenesis","termid":"GO:0045766"},{"relation_name":"is_a","term_name":"regulation of vascular wound healing","termid":"GO:0061043"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"positively_regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular wound healing","termid":"GO:0035470"}


id: GO:0032741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-18 production","termid":"GO:0032661"},{"relation_name":"positively_regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-18 production","secondary_identifiers":["GO:0045383","GO:0150122"],"synonyms":[{"name":"activation of interleukin-18 production","type":"narrow"},{"name":"positive regulation of IL-18 production","type":"exact"},{"name":"positive regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-18 secretion","type":"narrow"},{"name":"stimulation of interleukin-18 production","type":"narrow"},{"name":"up regulation of interleukin-18 production","type":"exact"},{"name":"up-regulation of interleukin-18 production","type":"exact"},{"name":"upregulation of interleukin-18 production","type":"exact"}],"termid":"GO:0032741"}


id: PBO:0078345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 11-1","termid":"PBO:0078345"}


id: MONDO:0016903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 4q deletion is a chromosome abnormality that affects many different parts of the body. People with this condition are missing genetic material located on the long arm (q) of chromosome 4 in each cell. The severity of the condition and the associated signs and symptoms vary based on the size and location of the deletion and which genes are involved. Common features shared by many people with this deletion includedistinctive craniofacial features, skeletal abnormalities, heart defects, intellectual disability, developmental delay, and short stature. Most cases are not inherited, although affectedpeople can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0001340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 4","termid":"MONDO:0016869"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 4","secondary_identifiers":["MEDGEN:468967","GARD:1340","UMLS:C0265404","Orphanet:262029","icd11.foundation:855319857","MESH:C537639"],"synonyms":[{"name":"4q deletion","type":"related"},{"name":"4q monosomy","type":"related"},{"name":"chromosome 4q deletion","type":"related"},{"name":"deletion 4q","type":"related"},{"name":"monosomy 4q","type":"related"},{"name":"partial deletion of chromosome 4q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 4","type":"exact"},{"name":"partial monosomy 4q","type":"related"},{"name":"partial monosomy of chromosome 4q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 4","type":"exact"}],"termid":"MONDO:0016903","xrefs":{"Monarch":{"xref_id":"0016903"}}}


id: PBO:0086591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression depends on Swi5p; GFP-fusion protein localizes to the endoplasmic reticulum; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO)","termid":"PBO:0086591"}


id: GO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase II transcription factor binding (obsolete GO:0001076)","synonyms":[{"name":"RNA polymerase II transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0001076"}


id: MONDO:0020278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metabolic disease associated with ocular features (obsolete MONDO:0020278)","secondary_identifiers":["Orphanet:98710"],"termid":"MONDO:0020278","xrefs":{"Monarch":{"xref_id":"0020278"}}}


id: PBO:0041300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4D","termid":"PBO:0041300"}


id: GO:0015449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type IV protein (DNA-protein) secretor activity (obsolete GO:0015449)","synonyms":[{"name":"type IV protein (DNA-protein) secretor activity","type":"exact"}],"termid":"GO:0015449"}


id: PBO:0072479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 8","termid":"PBO:0072479"}


id: FYPO:0000668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a peptidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased peptidase activity","synonyms":[{"name":"decreased protease activity","type":"exact"},{"name":"reduced peptidase activity","type":"exact"}],"termid":"FYPO:0000668"}


id: MONDO:0800449
data:
  {"annotated_genes":["SJAG_02068","SJAG_00158","SJAG_04790"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85107,85106,85105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019149"},{"annotations":[85364,85363,85365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019148"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"lysosomal lipid storage disorder","termid":"MONDO:0019245"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"lysosomal acid lipase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:278000","Orphanet:275761","SCTID:715923003","UMLS:C5574740","DOID:0080217","MEDGEN:1807768","MESH:C531854","GARD:12097","icd11.foundation:381622932"],"synonyms":[{"name":"LAL deficiency","type":"exact"}],"termid":"MONDO:0800449","terms_by_termid":{"MONDO:0019148":null,"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0800449"}}}


id: PBO:0050557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRas proto-oncogene, GTPase","termid":"PBO:0050557"}


id: MONDO:0016750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-cleft palate-abnormal retinal pigmentation syndrome is a rare orofacial clefting syndrome characterized by microcephaly, cleft of the secondary palate and other variable abnormalities, including abnormal retinal pigmentation, facial dysmorphism with hypotelorism and maxillary hypoplasia. Goiter, camptodactyly, abnormal dermatoglyphics and mild intellectual disability may also be associated. There have been no further descriptions in the literature since 1983.","definition_xrefs":["Orphanet:2521"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-cleft palate syndrome","secondary_identifiers":["GARD:8623","MEDGEN:419293","MESH:C535622","SCTID:719394002","UMLS:C2930954"],"synonyms":[{"name":"Halal syndrome","type":"exact"},{"name":"microcephaly cleft palate autosomal dominant","type":"related"},{"name":"microcephaly-cleft palate-abnormal retinal pigmentation syndrome","type":"related"}],"termid":"MONDO:0016750","xrefs":{"Monarch":{"xref_id":"0016750"}}}


id: MONDO:0023809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Milner-Khallouf-Gibson syndrome","secondary_identifiers":["UMLS:C2931503","MEDGEN:419429","MESH:C537473"],"synonyms":[{"name":"Milner Khallouf Gibson syndrome","type":"related"},{"name":"microcephaly, short stature, slow growth, beak nose, micrognathia, skin dyspigmentation and forearm and thumb dysplasia","type":"related"}],"termid":"MONDO:0023809","xrefs":{"Monarch":{"xref_id":"0023809"}}}


id: PBO:0049342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I antisense RNA 1","termid":"PBO:0049342"}


id: PBO:0055666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 2","termid":"PBO:0055666"}


id: PBO:0075561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG21 abhydrolase domain containing, maspardin","termid":"PBO:0075561"}


id: PATO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An osmolality which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"osmolality","termid":"PATO:0002027"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased osmolality","synonyms":[{"name":"low osmolality","type":"exact"}],"termid":"PATO:0002028"}


id: GO:0006978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, resulting in the induction of the transcription of p21 (also known as WAF1, CIP1 and SDI1) or any equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["PMID:10967424"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (obsolete GO:0006978)","termid":"GO:0006978"}


id: GO:1904588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycoprotein stimulus.","definition_xrefs":["PMID:14597422","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glycoprotein","synonyms":[{"name":"cellular response to glycoproteins","type":"exact"}],"termid":"GO:1904588"}


id: PBO:0046059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit I pseudogene 1","termid":"PBO:0046059"}


id: PR:Q9P7S9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ies4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.04","synonyms":[{"name":"Spom972h-ies4","type":"exact"}],"termid":"PR:Q9P7S9"}


id: PBO:0086319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to GPI-anchored aspartic proteases; such proteases are Yap1p and Yap3p; mCherry fusion protein localizes to the vacuole","termid":"PBO:0086319"}


id: GO:0060886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of epithelial to mesenchymal transition that contributes to the shaping of the semicircular canal by effectively removing epithelial cells from the fusion plate, forming the loops of the canals.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"is_a","term_name":"clearance of cells from fusion plate","termid":"GO:0060884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of cells from fusion plate by epithelial to mesenchymal transition","termid":"GO:0060886"}


id: PATO:0001553
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of occurrent to oxygen which is higher than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"aerobic (for occurrence)","termid":"PATO:0001459"},{"relation_name":"is_a","term_name":"increased sensitivity of a process","termid":"PATO:0001551"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased sensitivity of a process to oxygen","synonyms":[{"name":"high sensitivity of occurrent to oxygen","type":"exact"}],"termid":"PATO:0001553"}


id: GO:0021777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to its commitment to an association neuron fate.","definition_xrefs":["GOC:dgh","GOC:dph","PMID:12593981","GO_REF:0000021","GOC:cls","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in spinal cord association neuron specification (obsolete GO:0021777)","synonyms":[{"name":"BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"}],"termid":"GO:0021777"}


id: GO:0050456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-cysteine + NAD+ = L-cystine + H+ + NADH.","definition_xrefs":["RHEA:20597","EC:1.8.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-cystine reductase (NADH) activity","secondary_identifiers":["KEGG_REACTION:R00892","MetaCyc:CYSTINE-REDUCTASE-NADH-RXN"],"synonyms":[{"name":"L-cysteine:NAD+ oxidoreductase","type":"related"},{"name":"NADH-dependent cystine reductase activity","type":"related"},{"name":"NADH2:L-cystine oxidoreductase","type":"related"},{"name":"NADH:L-cystine oxidoreductase activity","type":"related"},{"name":"cystine reductase (NADH) activity","type":"related"},{"name":"cystine reductase (NADH2)","type":"related"},{"name":"cystine reductase activity","type":"exact"}],"termid":"GO:0050456"}


id: PBO:0113178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Killer toxin defense factor; key polymorphic factor in the defense against K28 toxin; localizes mainly to vacuolar membrane; most likely acts against K28 during its trafficking after endocytosis; member of DUP240 gene family","termid":"PBO:0113178"}


id: PBO:0048822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 7","termid":"PBO:0048822"}


id: MONDO:0011492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mandibulofacial dysostosis syndrome, Bauru type","secondary_identifiers":["MEDGEN:346839","OMIM:604830","MESH:C565744","UMLS:C1858101"],"synonyms":[{"name":"mandibulofacial dysostosis syndrome, Bauru type","type":"exact"}],"termid":"MONDO:0011492","xrefs":{"Monarch":{"xref_id":"0011492"}}}


id: MONDO:0018615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemicrania continua (HC) is a type of primary headache disorder, which means the headache is not caused by another medical condition. Symptoms of HC include constant mild to moderate pain on one side of the head (unilateral) with periods of more intense, severe, migraine -like pain (exacerbations). These severe pain periods can last from 20 minutes to days. The frequency of exacerbations also varies greatly. The headache stays on the same side of the head and usually without pain free periods. HC is more common in women and most often starts in adulthood, but may begin anywhere from 5 to 67 years of age. Diagnosis of hemicrania continua (HC) is made by ruling out other possible causes of the pain and by clinical symptoms. During the periods of severe pain, at least one of the following symptoms must be present on same side of the body as the headache: watering or red eyes (conjunctival injection), congested or runny nose, or drooping eyelid. In addition, the headache pain must respond to treatment with indomethacin. The cause of HC is unknown. Other treatments for those who cannot tolerate long term indomethacin therapy are being studied.","direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal autonomic cephalalgia","termid":"MONDO:0015530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemicrania continua","secondary_identifiers":["UMLS:C2349425","ICD9:339.41","ICD10CM:G44.51","Orphanet:443070","MEDGEN:748511","GARD:10795","icd11.foundation:1093161847","SCTID:443095000"],"termid":"MONDO:0018615","xrefs":{"Monarch":{"xref_id":"0018615"}}}


id: GO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a collectin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"collectin receptor activity","termid":"GO:0001863"}


id: PBO:0038417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_anatomical_participant","termid":"PBO:0038417"}


id: PBO:0044662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 4","termid":"PBO:0044662"}


id: PBO:0113165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine 5'-monophosphate (IMP)-specific 5'-nucleotidase; catalyzes the breakdown of IMP to inosine; responsible for production of nicotinamide riboside and nicotinic acid riboside; tetrameric form negatively regulated by inosine and ATP; expression positively regulated by nicotinic acid and glucose availability; does not show similarity to known 5'-nucleotidases from other organisms","termid":"PBO:0113165"}


id: GO:1990969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a host organism modulates the frequency, rate or extent of the activity of a viral RNA-binding transcription factor.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:25116364"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of viral RNA-binding transcription factor activity (obsolete GO:1990969)","synonyms":[{"name":"modulation by host of viral Tat activity","type":"narrow"}],"termid":"GO:1990969"}


id: PBO:0072346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 32","termid":"PBO:0072346"}


id: PBO:0041055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 6","termid":"PBO:0041055"}


id: GO:2000508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"}


id: MONDO:0010138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypermetabolic syndrome caused by the elevation of thyroid hormone levels in the serum. Signs and symptoms include tachycardia, palpitations, tremor, weight loss, warm weather intolerance, and moist skin. Causes include Graves disease, toxic nodular goiter, toxic thyroid nodule, and lymphocytic thyroiditis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Graves disease","termid":"MONDO:0005364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"thyrotoxicosis","secondary_identifiers":["NCIT:C61469","SCTID:90739004","DOID:7997","ICD9:242.90","ICD9:242.80","icd11.foundation:1470387017","UMLS:C0040156","ICD9:242","EFO:0009190","MEDGEN:11814","MESH:D013971"],"synonyms":[{"name":"GRD","type":"related"},{"name":"GRD1","type":"related"},{"name":"Graves disease, susceptibility to, 1","type":"related"},{"name":"hyperthyroidism, autoimmune","type":"related"}],"termid":"MONDO:0010138","xrefs":{"Monarch":{"xref_id":"0010138"}}}


id: PBO:0041423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C8orf34 antisense RNA 1","termid":"PBO:0041423"}


id: PBO:0058815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7973-1","termid":"PBO:0058815"}


id: MONDO:1011978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central retinal degeneration, non-human animal","secondary_identifiers":["OMIA:000867"],"termid":"MONDO:1011978","xrefs":{"Monarch":{"xref_id":"1011978"}}}


id: GO:0110001
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacterial protein complex that neutralises its own toxin by complexing the toxin with the antitoxin. The antitoxin can be either a protein or an RNA. The neutralising toxin-antitoxin complex also acts as a transcriptional repressor of the toxin-antitoxin operon.","definition_xrefs":["GOC:bhm","PMID:16109374","PMID:25093388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"toxin-antitoxin complex","termid":"GO:0110001"}


id: SO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a cyanelle, a photosynthetic plastid found in algae.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_sequence","synonyms":[{"name":"cyanelle sequence","type":"exact"}],"termid":"SO:0000746"}


id: PBO:0064881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2CA divergent transcript","termid":"PBO:0064881"}


id: PBO:0090763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Sco1","termid":"PBO:0090763"}


id: GO:0032876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA endoreduplication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of DNA endoreduplication","termid":"GO:0032875"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"DNA endoreduplication","termid":"GO:0042023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA endoreduplication","synonyms":[{"name":"down regulation of DNA endoreduplication","type":"exact"},{"name":"down-regulation of DNA endoreduplication","type":"exact"},{"name":"downregulation of DNA endoreduplication","type":"exact"},{"name":"inhibition of DNA endoreduplication","type":"narrow"},{"name":"negative regulation of DNA endoreplication","type":"exact"},{"name":"negative regulation of DNA re-duplication","type":"exact"}],"termid":"GO:0032876"}


id: FYPO:0005077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:17179073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"elongated cell during glucose starvation","synonyms":[{"name":"cell morphology, elongated cell during glucose starvation","type":"exact"},{"name":"elongated cell during glucose depletion","type":"exact"},{"name":"elongated cell during glucose deprivation","type":"exact"},{"name":"long cell during glucose starvation","type":"exact"}],"termid":"FYPO:0005077"}


id: PR:P36586
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt5 gene.","definition_xrefs":["UniProtKB:P36586","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein ypt5 (Schizosaccharomyces pombe)","termid":"PR:000030005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.15","synonyms":[{"name":"SPAC6F6.15","type":"related"},{"name":"Spom972h-ypt5","type":"exact"}],"termid":"PR:P36586"}


id: PBO:0043086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic epsilon subunit","termid":"PBO:0043086"}


id: PBO:0086790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; transcribed during sporulation; null mutant exhibits increased resistance to rapamycin","termid":"PBO:0086790"}


id: PBO:0072853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 3","termid":"PBO:0072853"}


id: GO:0032467
data:
  {"annotated_genes":["SJAG_04597","SJAG_03936","SJAG_02838","SJAG_03631","SJAG_04468","SJAG_02392","SJAG_01188","SJAG_04776","SJAG_05290","SJAG_00845","SJAG_01805","SJAG_01114","SJAG_00514","SJAG_03581","SJAG_04666","SJAG_00082","SJAG_03342","SJAG_03704","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89759,94171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[94172,113108,94340,110273,87297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[119340,90532,103456,110515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[89629,106142,92182,104942,106805,93567,77688,117634,115213,113109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[87298,94175,92183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the division of the cytoplasm of a cell, and its separation into two daughter cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinesis","termid":"GO:0032465"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokinesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null},"secondary_identifiers":["GO:0071777"],"synonyms":[{"name":"activation of cytokinesis","type":"narrow"},{"name":"positive regulation of cell cycle cytokinesis","type":"related"},{"name":"stimulation of cytokinesis","type":"narrow"},{"name":"up regulation of cytokinesis","type":"exact"},{"name":"up-regulation of cytokinesis","type":"exact"},{"name":"upregulation of cytokinesis","type":"exact"}],"termid":"GO:0032467","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: GO:0061430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of shaping a trabecula in bone. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula morphogenesis","termid":"GO:0061383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone trabecula morphogenesis","termid":"GO:0061430"}


id: MONDO:0016162
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012399"}]},"cv_name":"mondo","definition":"Bilateral frontal polymicrogyria is one of the rarest subtypes of polymicrogyria. It is a symmetric and bilateral form (in both brain hemispheres) that only involves the frontal lobes without including the area located behind the Sylvius fissure or the area located behind the Rolando sulcus. Some researchers classify the condition into two different forms: bilateral frontal polymicrogyriaand the bilateral frontoparietal. Signs and symptoms included delayed motor and language milestones; spastic (stiffness) hemiparesis (weakness in one side of the body) or quadriparesis (weakness in all four limbs of the body); and mild to moderate intellectual disability. Seizures mayalsobe present. The frontoparietal form is caused by changes (mutations) in the GPR56 gene but the cause for the frontal form of polymicrogyira is still not known. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral frontal polymicrogyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5437679","DOID:0080921","GARD:10783","icd11.foundation:688947844","MEDGEN:1754014","Orphanet:208444"],"termid":"MONDO:0016162","terms_by_termid":{"MONDO:0012399":null},"xrefs":{"Monarch":{"xref_id":"0016162"}}}


id: GO:0070678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a preprotein, the unprocessed form of a protein destined to undergo co- or post-translational processing.","definition_xrefs":["PMID:12914940","GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"preprotein binding","synonyms":[{"name":"unprocessed protein binding","type":"exact"}],"termid":"GO:0070678"}


id: PBO:0039067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase","termid":"PBO:0039067"}


id: GO:0009230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine metabolic process","termid":"GO:0006772"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"thiamine-containing compound catabolic process","termid":"GO:0042725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"thiamine catabolic process","synonyms":[{"name":"thiamin catabolic process","type":"exact"},{"name":"thiamine breakdown","type":"exact"},{"name":"thiamine catabolism","type":"exact"},{"name":"thiamine degradation","type":"exact"},{"name":"vitamin B1 catabolic process","type":"exact"},{"name":"vitamin B1 catabolism","type":"exact"}],"termid":"GO:0009230"}


id: GO:0071377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucagon stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucagon","termid":"GO:0033762"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucagon stimulus","secondary_identifiers":["Reactome:R-HSA-163359"],"termid":"GO:0071377"}


id: PBO:0087493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of DNA primase; DNA primase is required for DNA synthesis and double-strand break repair","termid":"PBO:0087493"}


id: PBO:0004068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Pst1","termid":"PBO:0004068"}


id: GO:0007121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of defining subsequent sites of bud emergence such that budding takes place at alternating poles of a budding cell.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud site selection","termid":"GO:0000282"},{"relation_name":"is_a","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150","GO:0007163"],"is_obsolete":false,"name":"bipolar cellular bud site selection","synonyms":[{"name":"bipolar bud site selection","type":"exact"},{"name":"bipolar budding","type":"broad"},{"name":"polar budding","type":"broad"}],"termid":"GO:0007121"}


id: PBO:0083172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF PRP8/YHR165C","termid":"PBO:0083172"}


id: GO:0036060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a slit diaphragm, specialized cell-cell junction found between the interdigitating foot processes of the glomerular epithelium (the podocytes) in the vertebrate kidney, which is adapted for facilitating glomerular filtration.","definition_xrefs":["GOC:rph","PMID:20633639","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filtration diaphragm assembly","termid":"GO:0036058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"slit diaphragm assembly","termid":"GO:0036060"}


id: PBO:0082187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol dehydrogenase; fermentative isozyme active as homo- or heterotetramers; required for the reduction of acetaldehyde to ethanol, the last step in the glycolytic pathway; ADH1 has a paralog, ADH5, that arose from the whole genome duplication","termid":"PBO:0082187"}


id: PBO:0075729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 9","termid":"PBO:0075729"}


id: GO:0102784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: lutein + 2 O2 = 3-hydroxy-beta-ionone + 3-hydroxy-alpha-ionone + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lutein oxygenase activity (obsolete GO:0102784)","termid":"GO:0102784"}


id: PR:P79011
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor IIE subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04370","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIE subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.08c","secondary_identifiers":["UniProtKB:P79011"],"synonyms":[{"name":"Spom972h-GTF2E2","type":"exact"},{"name":"TFIIE-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79011"}


id: GO:0075105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont calcium or calmodulin-mediated signal transduction (obsolete GO:0075105)","synonyms":[{"name":"negative regulation by host of symbiont Ca++ or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075105"}


id: PBO:0030065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoglycerate_mutase_activity","termid":"PBO:0030065"}


id: PATO:0001612
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of color which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant color","termid":"PATO:0001615"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability of color","synonyms":[{"name":"high variability of color","type":"exact"}],"termid":"PATO:0001612"}


id: GO:0039644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces a host NF-kappaB cascade.","definition_xrefs":["PMID:25275128","PMID:10920188"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host NF-kappaB cascade (obsolete GO:0039644)","synonyms":[{"name":"inhibition of host NF-kappa-B by virus","type":"exact"},{"name":"suppression by virus of host NF-kappaB transcription factor activity","type":"related"}],"termid":"GO:0039644"}


id: MOD:00843
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing (15)N.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(15)N labeled residue","termid":"MOD:00843"}


id: MONDO:1011159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis that occurs in koala.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis, non-human animal","termid":"MONDO:1010297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, koala","secondary_identifiers":["OMIA:000747-38626"],"termid":"MONDO:1011159","xrefs":{"Monarch":{"xref_id":"1011159"}}}


id: PBO:0066721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 18","termid":"PBO:0066721"}


id: GO:0019112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrol + glucose = phenanthryl-beta-D-glucopyranoside + H2O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"phenanthrol glycosyltransferase activity","termid":"GO:0019112"}


id: FYPO:0005882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of gamma-glutamyl-2-aminobutyrate (also called gamma-Glu-Abu) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular gamma-glutamyl-2-aminobutyrate level","synonyms":[{"name":"increased cellular gamma-Glu-Abu level","type":"related"},{"name":"increased cellular gamma-Glu-Abu(1-) level","type":"exact"},{"name":"increased cellular gamma-glutamyl-2-aminobutyrate level during mitotic cell cycle","type":"related"},{"name":"increased cellular gamma-glutamyl-2-aminobutyrate level during vegetative growth","type":"exact"},{"name":"increased gamma-glutamyl-2-aminobutyrate accumulation","type":"related"}],"termid":"FYPO:0005882"}


id: PBO:0042474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 1","termid":"PBO:0042474"}


id: PBO:0055826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 1","termid":"PBO:0055826"}


id: PBO:0056395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE1 pseudogene 2","termid":"PBO:0056395"}


id: PBO:0085037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic subunit of the NatC N-terminal acetyltransferase; required for replication of dsRNA virus; expression is glucose-repressible; human NatC ortholog, Naa35, requires co-expression of the human catalytic subunit, Naa30, to functionally complement the null allele","termid":"PBO:0085037"}


id: MONDO:0012702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 6","secondary_identifiers":["OMIM:611598","MEDGEN:369397","UMLS:C1969030"],"synonyms":[{"name":"CELIAC6","type":"exact"},{"name":"autoimmune disease, susceptibility to, 5","type":"related"},{"name":"celiac disease, susceptibility to, 6","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 6","type":"related"}],"termid":"MONDO:0012702","xrefs":{"Monarch":{"xref_id":"0012702"}}}


id: PBO:0054049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1391","termid":"PBO:0054049"}


id: PBO:0051269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa deleting element or like","termid":"PBO:0051269"}


id: PBO:0003124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexitol dehydrogenase (predicted)","termid":"PBO:0003124"}


id: PBO:0060113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 14","termid":"PBO:0060113"}


id: PBO:0088227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L8/L2","termid":"PBO:0088227"}


id: MOD:00847
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two (18)O atom for two (16)O atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O substituted residue","termid":"MOD:00845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O disubstituted residue","termid":"MOD:00847"}


id: PBO:0088334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in clearing protein aggregates","termid":"PBO:0088334"}


id: MONDO:0007504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thickened earlobes-conductive deafness syndrome is characterized by microtia with thickened ear lobes, micrognathia and conductive hearing loss due to congenital ossicular anomalies. It has been described in two families. The mode of inheritance is autosomal dominant.","definition_xrefs":["Orphanet:2405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thickened earlobes-conductive deafness syndrome","secondary_identifiers":["OMIM:128980","SCTID:722476007","UMLS:C1851896","MEDGEN:343676","GARD:2195"],"synonyms":[{"name":"Escher Hirt syndrome","type":"related"},{"name":"Escher-Hirt syndrome","type":"exact"},{"name":"earlobes, thickened, with conductive deafness from incudostapedial abnormalities","type":"related"}],"termid":"MONDO:0007504","xrefs":{"Monarch":{"xref_id":"0007504"}}}


id: PBO:0066380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radixin","termid":"PBO:0066380"}


id: GO:0071060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha7-beta1 integrin complex bound to the tetraspanin CD151.","definition_xrefs":["PMID:11884516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha7-beta1 integrin-CD151 complex","synonyms":[{"name":"ITGA7-ITGB1-CD151 complex","type":"narrow"}],"termid":"GO:0071060"}


id: GO:0047787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-5beta-steroid + NADP+ = a 3-oxo-Delta(4)-steroid + H+ + NADPH. The enzyme from human efficiently catalyzes the reduction of progesterone, androstenedione, 17alpha-hydroxyprogesterone and testosterone to 5beta-reduced metabolites; it can also act on aldosterone, corticosterone and cortisol, but to a lesser extent. The bile acid intermediates 7alpha,12alpha-dihydroxy-4-cholesten-3- one and 7alpha-hydroxy-4-cholesten-3-one can also act as substrates.","definition_xrefs":["EC:1.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enone reductase activity","termid":"GO:0035671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"Delta4-3-oxosteroid 5beta-reductase activity","secondary_identifiers":["RHEA:54412","GO:0047752","MetaCyc:RXN-23672"],"synonyms":[{"name":"3-oxo-5beta-steroid:NADP+ delta4-oxidoreductase activity","type":"exact"},{"name":"3-oxo-Delta(4)-steroid 5-beta-reductase activity","type":"exact"},{"name":"3-oxo-Delta4-steroid 5beta-reductase activity","type":"exact"},{"name":"4,5beta-dihydrocortisone:NADP+ delta4-oxidoreductase activity","type":"narrow"},{"name":"5-beta-reductase activity","type":"broad"},{"name":"5beta-cholestan-3-one:NADP+ 4,5-oxidoreductase activity","type":"narrow"},{"name":"5beta-reductase activity","type":"related"},{"name":"Delta(4)-3-ketosteroid 5-beta-reductase activity","type":"related"},{"name":"Delta(4)-5-beta-reductase activity","type":"related"},{"name":"Delta(4)-hydrogenase activity","type":"related"},{"name":"Delta4-3-ketosteroid 5beta-reductase activity","type":"related"},{"name":"Delta4-3-oxosteroid 5-beta-reductase activity","type":"exact"},{"name":"Delta4-5beta-reductase activity","type":"related"},{"name":"Delta4-hydrogenase activity","type":"related"},{"name":"androstenedione 5-beta-reductase activity","type":"narrow"},{"name":"androstenedione 5beta-reductase activity","type":"narrow"},{"name":"cholestenone 5-beta-reductase activity","type":"narrow"},{"name":"cholestenone 5b-reductase activity","type":"narrow"},{"name":"cholestenone 5beta-reductase activity","type":"narrow"},{"name":"cortisone 5-beta-reductase activity","type":"narrow"},{"name":"cortisone 5beta-reductase activity","type":"narrow"},{"name":"cortisone b-reductase activity","type":"narrow"},{"name":"cortisone beta-reductase activity","type":"narrow"},{"name":"cortisone delta(4)-5-beta-reductase activity","type":"narrow"},{"name":"cortisone delta4-5beta-reductase activity","type":"related"},{"name":"steroid 5-beta-reductase activity","type":"related"},{"name":"steroid 5beta-reductase activity","type":"related"},{"name":"testosterone 5-beta-reductase activity","type":"narrow"},{"name":"testosterone 5beta-reductase activity","type":"narrow"}],"termid":"GO:0047787"}


id: PBO:0062766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily T member 1 pseudogene","termid":"PBO:0062766"}


id: PBO:0040684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pseudogene 2","termid":"PBO:0040684"}


id: MONDO:1012238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal nephropathy, non-human animal","termid":"MONDO:1011912"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal nephropathy, dog","secondary_identifiers":["OMIA:000860-9615"],"termid":"MONDO:1012238","xrefs":{"Monarch":{"xref_id":"1012238"}}}


id: PBO:0081228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 8","termid":"PBO:0081228"}


id: MONDO:1010506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocardial fibroelastosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial fibroelastosis, non-human animal","termid":"MONDO:1010027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocardial fibroelastosis, horse","secondary_identifiers":["OMIA:001803-9796"],"termid":"MONDO:1010506","xrefs":{"Monarch":{"xref_id":"1010506"}}}


id: PBO:0072869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine N1-acetyltransferase family member 2","termid":"PBO:0072869"}


id: GO:1900886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tridecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tridecane biosynthetic process","termid":"GO:1900884"},{"relation_name":"is_a","term_name":"positive regulation of tridecane metabolic process","termid":"GO:1900895"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"positively_regulates","term_name":"tridecane biosynthetic process","termid":"GO:1900632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tridecane biosynthetic process","synonyms":[{"name":"activation of tridecane anabolism","type":"narrow"},{"name":"activation of tridecane biosynthesis","type":"narrow"},{"name":"activation of tridecane biosynthetic process","type":"narrow"},{"name":"activation of tridecane formation","type":"narrow"},{"name":"activation of tridecane synthesis","type":"narrow"},{"name":"positive regulation of tridecane anabolism","type":"exact"},{"name":"positive regulation of tridecane biosynthesis","type":"exact"},{"name":"positive regulation of tridecane formation","type":"exact"},{"name":"positive regulation of tridecane synthesis","type":"exact"},{"name":"up regulation of tridecane anabolism","type":"exact"},{"name":"up regulation of tridecane biosynthesis","type":"exact"},{"name":"up regulation of tridecane biosynthetic process","type":"exact"},{"name":"up regulation of tridecane formation","type":"exact"},{"name":"up regulation of tridecane synthesis","type":"exact"},{"name":"up-regulation of tridecane anabolism","type":"exact"},{"name":"up-regulation of tridecane biosynthesis","type":"exact"},{"name":"up-regulation of tridecane biosynthetic process","type":"exact"},{"name":"up-regulation of tridecane formation","type":"exact"},{"name":"up-regulation of tridecane synthesis","type":"exact"},{"name":"upregulation of tridecane anabolism","type":"exact"},{"name":"upregulation of tridecane biosynthesis","type":"exact"},{"name":"upregulation of tridecane biosynthetic process","type":"exact"},{"name":"upregulation of tridecane formation","type":"exact"},{"name":"upregulation of tridecane synthesis","type":"exact"}],"termid":"GO:1900886"}


id: PBO:0085927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; identical to Pau21p; encodes two proteins that are translated from two different start codons","termid":"PBO:0085927"}


id: MONDO:0030724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 84","secondary_identifiers":["UMLS:C5676952","OMIM:619810","MEDGEN:1801352"],"synonyms":[{"name":"DFNA84","type":"exact"},{"name":"deafness, autosomal dominant 84","type":"narrow"}],"termid":"MONDO:0030724","xrefs":{"Monarch":{"xref_id":"0030724"}}}


id: PBO:0036509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent reductase for Dph3, Cbr1 (predicted)","termid":"PBO:0036509"}


id: GO:0046298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4-dichlorobenzoate metabolic process","termid":"GO:0018898"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"2,4-dichlorobenzoate catabolic process","synonyms":[{"name":"2,4-dichlorobenzoate breakdown","type":"exact"},{"name":"2,4-dichlorobenzoate catabolism","type":"exact"},{"name":"2,4-dichlorobenzoate degradation","type":"exact"}],"termid":"GO:0046298"}


id: MONDO:0030733
data:
  {"annotated_genes":["SJAG_02006"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86858],"is_not":false,"summary":null,"term":"MONDO:0030733"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 70","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619828","DOID:0070569","MEDGEN:1809945","UMLS:C5676962"],"synonyms":[{"name":"SPGF70","type":"exact"},{"name":"spermatogenic failure 70","type":"exact"}],"termid":"MONDO:0030733","terms_by_termid":{"MONDO:0030733":null},"xrefs":{"Monarch":{"xref_id":"0030733"}}}


id: PBO:0039110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor","termid":"PBO:0039110"}


id: PBO:0048361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 72","termid":"PBO:0048361"}


id: PBO:0071218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 59","termid":"PBO:0071218"}


id: GO:0006777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257","PMID:22370186","PMID:23201473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"},{"relation_name":"is_a","term_name":"molybdopterin cofactor biosynthetic process","termid":"GO:0032324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Mo-molybdopterin cofactor biosynthetic process","secondary_identifiers":["MetaCyc:PWY-6823"],"synonyms":[{"name":"Mo-molybdopterin cofactor anabolism","type":"exact"},{"name":"Mo-molybdopterin cofactor biosynthesis","type":"exact"},{"name":"Mo-molybdopterin cofactor formation","type":"exact"},{"name":"Mo-molybdopterin cofactor synthesis","type":"exact"},{"name":"Moco biosynthesis","type":"exact"},{"name":"Moco biosynthetic process","type":"exact"},{"name":"molybdenum cofactor biosynthetic process","type":"related"}],"termid":"GO:0006777"}


id: PBO:0003770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor (predicted)","termid":"PBO:0003770"}


id: PBO:0002718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Noc1 (predicted)","termid":"PBO:0002718"}


id: GO:0120183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of disaggregation of a focal adhesion into its constituent components.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of focal adhesion disassembly","termid":"GO:0120182"},{"relation_name":"is_a","term_name":"positive regulation of cell-substrate junction organization","termid":"GO:0150117"},{"relation_name":"positively_regulates","term_name":"focal adhesion disassembly","termid":"GO:0120181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of focal adhesion disassembly","termid":"GO:0120183"}


id: PATO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thickness","termid":"PATO:0000915"}


id: PBO:0041909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene like 1","termid":"PBO:0041909"}


id: PBO:0054720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2129","termid":"PBO:0054720"}


id: FYPO:0000291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression phenotype","termid":"FYPO:0000142"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"translation phenotype","synonyms":[{"name":"fission yeast translation phenotype","type":"exact"},{"name":"translation phenotype during mitotic cell cycle","type":"related"},{"name":"translation phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0000291"}


id: PBO:0072191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 8","termid":"PBO:0072191"}


id: PBO:0035877
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_during_mitotic_G1_phase","termid":"PBO:0035877"}


id: PBO:0079424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 7","termid":"PBO:0079424"}


id: PBO:0075576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPIN4 antisense RNA 1","termid":"PBO:0075576"}


id: MONDO:0008087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary neuropathy with liability to pressure palsies (HNPP) is an inherited peripheral nerve disorder characterized by recurrent mononeuropathy usually triggered by minor physical activities.","definition_xrefs":["Orphanet:640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"chromosome 17p deletion","termid":"MONDO:0022754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary neuropathy with liability to pressure palsies","secondary_identifiers":["DECIPHER:31","icd11.foundation:2126843932","MedDRA:10069382","MESH:C536965","OMIM:162500","DOID:0060843","UMLS:C0393814","SCTID:230558006","MEDGEN:98291","GARD:5221"],"synonyms":[{"name":"HNPP","type":"exact"},{"name":"Tomaculous neuropathy","type":"exact"},{"name":"current pressure-sensitive neuropathy","type":"exact"},{"name":"familial recurrent polyneuropathy","type":"exact"},{"name":"hereditary liability to pressure palsies","type":"exact"},{"name":"hereditary neuropathy with liability to pressure palsies","type":"exact"},{"name":"hereditary neuropathy with liability to pressure palsy","type":"related"},{"name":"heterozygous microdeletion 17p11.2p12","type":"exact"},{"name":"neuropathy, hereditary, with liability to pressure palsies","type":"related"},{"name":"neuropathy, recurrent, with pressure palsies","type":"exact"},{"name":"polyneuropathy, familial recurrent","type":"related"},{"name":"potato-grubbing palsy","type":"exact"},{"name":"tomaculous neuropathy","type":"exact"},{"name":"tulip-bulb digger's palsy","type":"exact"}],"termid":"MONDO:0008087","xrefs":{"Monarch":{"xref_id":"0008087"}}}


id: GO:0030193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of coagulation","termid":"GO:0050818"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"is_a","term_name":"regulation of hemostasis","termid":"GO:1900046"},{"relation_name":"regulates","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood coagulation","termid":"GO:0030193"}


id: SO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000008 gene_sensu_your_favorite_organism (obsolete SO:0000008)","termid":"SO:0000008"}


id: MONDO:0007933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adult-onset foveomacular vitelliform dystrophy","termid":"MONDO:0011979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitelliform macular dystrophy 1","secondary_identifiers":["GARD:10120","OMIM:153840","UMLS:C4551953","MEDGEN:1636950","MESH:C537832"],"synonyms":[{"name":"VMD1","type":"exact"},{"name":"macular dystrophy, atypical vitelliform","type":"related"},{"name":"macular dystrophy, vitelliform, 1","type":"related"},{"name":"vitelliform macular dystrophy, atypical","type":"related"}],"termid":"MONDO:0007933","xrefs":{"Monarch":{"xref_id":"0007933"}}}


id: PBO:0088928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major poly(A) binding protein Pabp/Pab1-related","termid":"PBO:0088928"}


id: GO:1901683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an arsenate ion from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"arsenate ion transmembrane transporter activity","termid":"GO:1901683"}


id: PBO:0084836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial pyrimidine nucleotide transporter; imports pyrimidine nucleoside triphosphates and exports pyrimidine nucleoside monophosphates; member of the mitochondrial carrier family","termid":"PBO:0084836"}


id: PBO:0027945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_fragmented_septum_and_more_than_four_nuclei","termid":"PBO:0027945"}


id: FYPO:0001656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of asparagine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal asparagine import","synonyms":[{"name":"abnormal L-asparagine import","type":"exact"},{"name":"abnormal L-asparagine import across plasma membrane","type":"exact"},{"name":"abnormal asparagine import during mitotic cell cycle","type":"related"},{"name":"abnormal asparagine import during vegetative growth","type":"exact"},{"name":"abnormal asparagine import into cell","type":"exact"},{"name":"abnormal asparagine uptake","type":"exact"}],"termid":"FYPO:0001656"}


id: PBO:0080184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 5","termid":"PBO:0080184"}


id: PBO:0074448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small leucine rich protein 1","termid":"PBO:0074448"}


id: MONDO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"rubeosis iridis","secondary_identifiers":["UMLS:C0154916","ICD9:364.42","SCTID:51995000","DOID:14000","MEDGEN:488789"],"termid":"MONDO:0001855","xrefs":{"Monarch":{"xref_id":"0001855"}}}


id: PBO:0011980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rad57/Rhp57","termid":"PBO:0011980"}


id: PBO:0073759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 13","termid":"PBO:0073759"}


id: PBO:0077671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 17","termid":"PBO:0077671"}


id: SO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine methylated at the 4 nitrogen.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4_methylcytosine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf","http://www.insdc.org/files/feature_table.html#7.4.2"],"synonyms":[{"name":"4-mC","type":"exact"},{"name":"4-methylcytosine","type":"exact"},{"name":"N4 methylcytosine","type":"exact"},{"name":"N4-methylcytosine","type":"exact"},{"name":"N4_methylcytosine","type":"exact"},{"name":"m-4C","type":"exact"},{"name":"m4c","type":"exact"}],"termid":"SO:0001919"}


id: PR:Q9UTI1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fub1 gene.","definition_xrefs":["UniProtKB:Q9UTI1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing boundary-establishment protein FUB1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.10","synonyms":[{"name":"Spom972h-fub1","type":"exact"},{"name":"proteasome inhibitor PI31-like protein SPAC15E1.10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI1"}


id: PBO:0108545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase type II (DSB-forming) Rec12/Spo11","termid":"PBO:0108545"}


id: MONDO:0009415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoglycemia, leucine-induced","secondary_identifiers":["UMLS:C0271714","MEDGEN:82888","DOID:0112262","OMIM:240800","SCTID:62151007","MESH:C537150"],"synonyms":[{"name":"LIH","type":"related"},{"name":"familial infantile hypoglycemia precipitated by leucine","type":"related"},{"name":"hypoglycemia leucine induced","type":"related"},{"name":"hypoglycemia leucine-induced","type":"related"},{"name":"hypoglycemia of infancy, leucine-sensitive","type":"exact"},{"name":"hypoglycemia, leucine-induced","type":"exact"},{"name":"leucine-sensitive hypoglycemia of infancy","type":"related"}],"termid":"MONDO:0009415","xrefs":{"Monarch":{"xref_id":"0009415"}}}


id: PBO:0069429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 694, pseudogene","termid":"PBO:0069429"}


id: PBO:0004563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L38 (predicted)","termid":"PBO:0004563"}


id: PBO:0090205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body half bridge protein Sfi1","termid":"PBO:0090205"}


id: GO:0035956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the breakdown of starch, by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:9342405"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of starch catabolic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035956)","synonyms":[{"name":"regulation of starch breakdown by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of starch breakdown by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of starch catabolic process by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of starch catabolism by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of starch catabolism by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of starch degradation by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of starch degradation by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:0035956"}


id: PBO:0042298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD7 molecule","termid":"PBO:0042298"}


id: PR:Q10087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C11D3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.08c","synonyms":[{"name":"Spom972h-SPAC11D3.08c","type":"exact"}],"termid":"PR:Q10087"}


id: PBO:0046516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum lectin 1 pseudogene 1","termid":"PBO:0046516"}


id: GO:0050258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + H+ + riboflavin = D-ribitol + lumichrome.","definition_xrefs":["EC:3.5.99.1","RHEA:11408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"riboflavinase activity","secondary_identifiers":["MetaCyc:RIBOFLAVINASE-RXN","KEGG_REACTION:R01732"],"synonyms":[{"name":"riboflavin hydrolase activity","type":"related"}],"termid":"GO:0050258"}


id: GO:0097253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-hydroxybutyrate from one side of a membrane to the other. Beta-hydroxybutyrate is the conjugate base of (R)-3-hydroxybutyric acid.","definition_xrefs":["GOC:dsf","PMID:22302940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transmembrane transporter activity","termid":"GO:0015245"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"beta-hydroxybutyrate transmembrane transporter activity","synonyms":[{"name":"(R)-3-hydroxybutyrate transmembrane transporter activity","type":"exact"},{"name":"3-hydroxybutanoic acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0097253"}


id: GO:0022889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of serine from one side of a membrane to the other. Serine is 2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","RHEA:35031"],"gene_count":0,"genotype_count":0,"name":"obsolete serine transmembrane transporter activity (obsolete GO:0022889)","termid":"GO:0022889"}


id: MONDO:0014248
data:
  {"annotated_genes":["SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85591],"is_not":false,"summary":null,"term":"MONDO:0014248"}]},"cv_name":"mondo","definition":"SLC35A3-CDG is a form of congenital disorders of N-linked glycosylation characterized by distal arthrogryposis (mild flexion contractures of the fingers, deviation of the distal phalanges, swan-neck deformity), retromicrognathia, general muscle hypotonia, delayed psychomotor development, autism spectrum disorder (speech delay, abnormal use of speech, difficulties in initiating, understanding and maintaining social interaction, limited non-verbal communication and repetitive behavior), seizures, microcephaly and mild to moderate intellectual disability that becomes apparent with age. The disease is caused by mutations in the gene SLC35A3 (1p21).","definition_xrefs":["Orphanet:370943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"autism spectrum disorder - epilepsy - arthrogryposis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615553","UMLS:C3809910","MEDGEN:816240","GARD:17604"],"synonyms":[{"name":"AMRS","type":"related"},{"name":"SLC35A3-CDG","type":"exact"},{"name":"arthrogryposis, impaired intellectual development, and seizures","type":"exact"},{"name":"arthrogryposis, intellectual disability, and seizures","type":"related"},{"name":"arthrogryposis, mental retardation, and seizures","type":"related"}],"termid":"MONDO:0014248","terms_by_termid":{"MONDO:0014248":null},"xrefs":{"Monarch":{"xref_id":"0014248"}}}


id: PBO:0069165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 417, pseudogene","termid":"PBO:0069165"}


id: PATO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a neoplastic cell by virtue of the bearer's exhibiting breakdown of cell-cell interaction maintaining tissue architecture, proliferative dysregulation and bizarre modification to nucleus size and shape.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplastic","termid":"PATO:0002092"}


id: PBO:0041529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 92","termid":"PBO:0041529"}


id: GO:0046399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucuronate, the anion of glucuronic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucuronate biosynthetic process","synonyms":[{"name":"glucuronate anabolism","type":"exact"},{"name":"glucuronate biosynthesis","type":"exact"},{"name":"glucuronate formation","type":"exact"},{"name":"glucuronate synthesis","type":"exact"}],"termid":"GO:0046399"}


id: PBO:0012264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal of transmembrane channel, truncated","termid":"PBO:0012264"}


id: PBO:0034111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_immediately_downstream_of_sequence_of","termid":"PBO:0034111"}


id: MONDO:0018800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kallmann syndrome (KS) is a developmental genetic disorder characterized by the association of congenital hypogonadotropic hypogonadism (CHH) due to gonadotropin-releasing hormone (GnRH) deficiency, and anosmia or hyposmia (with hypoplasia or aplasia of the olfactory bulbs).","definition_xrefs":["Orphanet:478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kallmann syndrome","secondary_identifiers":["GARD:10771","MedDRA:10053142","DOID:3614","MESH:D017436","ICD10CM:E23.0","MEDGEN:102469","NANDO:2200381","ICD9:253.4","UMLS:C0162809","NORD:1319","NCIT:C75479","SCTID:93559003"],"synonyms":[{"name":"Kallman syndrome","type":"exact"},{"name":"Kallman's syndrome","type":"exact"},{"name":"Olfacto-genital pathological sequence","type":"exact"},{"name":"congenital hypogonadotropic hypogonadism with anosmia","type":"exact"},{"name":"familial hypogonadism with anosmia","type":"exact"},{"name":"hypogonadism with anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism with anosmia","type":"exact"}],"termid":"MONDO:0018800","xrefs":{"Monarch":{"xref_id":"0018800"}}}


id: MONDO:0700242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by a heterozygous variant in the IMPG2 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"IMPG2-related dominant retinopathy","synonyms":[{"name":"IMPG2-related dominant retinopathy","type":"exact"}],"termid":"MONDO:0700242","xrefs":{"Monarch":{"xref_id":"0700242"}}}


id: PBO:0070595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 62","termid":"PBO:0070595"}


id: PBO:0029077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_ubiquitinated_protein_in_cell_during_vegetative_growth","termid":"PBO:0029077"}


id: GO:1901185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"negatively_regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of ERBB signaling pathway","synonyms":[{"name":"down regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"down regulation of EGFR family signaling pathway","type":"related"},{"name":"down regulation of ERBB signaling pathway","type":"exact"},{"name":"down regulation of ERBB signalling pathway","type":"exact"},{"name":"down regulation of ErbB signaling","type":"exact"},{"name":"down-regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"down-regulation of EGFR family signaling pathway","type":"related"},{"name":"down-regulation of ERBB signaling pathway","type":"exact"},{"name":"down-regulation of ERBB signalling pathway","type":"exact"},{"name":"down-regulation of ErbB signaling","type":"exact"},{"name":"downregulation of EGF receptor family signaling pathway","type":"exact"},{"name":"downregulation of EGFR family signaling pathway","type":"related"},{"name":"downregulation of ERBB signaling pathway","type":"exact"},{"name":"downregulation of ERBB signalling pathway","type":"exact"},{"name":"downregulation of ErbB signaling","type":"exact"},{"name":"inhibition of EGF receptor family signaling pathway","type":"exact"},{"name":"inhibition of EGFR family signaling pathway","type":"related"},{"name":"inhibition of ERBB signaling pathway","type":"narrow"},{"name":"inhibition of ERBB signalling pathway","type":"exact"},{"name":"inhibition of ErbB signaling","type":"exact"},{"name":"negative regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"negative regulation of EGFR family signaling pathway","type":"related"},{"name":"negative regulation of ERBB signalling pathway","type":"exact"},{"name":"negative regulation of ErbB signaling","type":"exact"}],"termid":"GO:1901185"}


id: MONDO:0033569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 49","secondary_identifiers":["UMLS:C5436616","DOID:0112110","MEDGEN:1762338","OMIM:619024"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 49","type":"related"},{"name":"COXPD49","type":"related"}],"termid":"MONDO:0033569","xrefs":{"Monarch":{"xref_id":"0033569"}}}


id: MONDO:1011883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilute coat color with neurological defects, non-human animal","secondary_identifiers":["OMIA:001501"],"termid":"MONDO:1011883","xrefs":{"Monarch":{"xref_id":"1011883"}}}


id: PBO:0082103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA ATPase with protein-unfoldase activity; subunit of polyUb-selective segregase complex involved in ERAD, INM-associated degradation (INMAD), mitotic spindle disassembly, macroautophagy, PMN, ribosome-associated degradation, ribophagy, homotypic ER membrane fusion, SCF complex disassembly, cell wall integrity, and telomerase regulation; mobilizes membrane-anchored transcription factors by regulated Ub/proteasome-dependent processing (RUP); human ortholog VCP complements a cdc48 mutant","termid":"PBO:0082103"}


id: MONDO:1011512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, horse","secondary_identifiers":["OMIA:000411-9796"],"termid":"MONDO:1011512","xrefs":{"Monarch":{"xref_id":"1011512"}}}


id: GO:1904706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:23246467","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell proliferation","termid":"GO:0048662"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell proliferation","termid":"GO:1904705"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell proliferation","termid":"GO:1990874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell proliferation","synonyms":[{"name":"down regulation of VSMC proliferation","type":"exact"},{"name":"down regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"down-regulation of VSMC proliferation","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"downregulation of VSMC proliferation","type":"exact"},{"name":"downregulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"inhibition of VSMC proliferation","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell proliferation","type":"narrow"},{"name":"negative regulation of VSMC proliferation","type":"exact"},{"name":"negative regulation of vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1904706"}


id: PBO:0039543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 40","termid":"PBO:0039543"}


id: GO:1901991
data:
  {"annotated_genes":["SJAG_02771","SJAG_03048","SJAG_03591","SJAG_01605","SJAG_02098","SJAG_03026","SJAG_03353","SJAG_02723","SJAG_01855","SJAG_01118","SJAG_00991","SJAG_00640","SJAG_03942","SJAG_04999","SJAG_02592","SJAG_00996","SJAG_06592","SJAG_04394","SJAG_04332","SJAG_04126","SJAG_01679","SJAG_01210","SJAG_01680","SJAG_01330","SJAG_00364","SJAG_00318","SJAG_02332","SJAG_02576","SJAG_03073","SJAG_01076","SJAG_01044","SJAG_04287","SJAG_02026","SJAG_01429","SJAG_04699","SJAG_00600","SJAG_02858","SJAG_00526","SJAG_02451","SJAG_04259","SJAG_04671","SJAG_05346","SJAG_04280","SJAG_04943","SJAG_04884","SJAG_00071","SJAG_02074","SJAG_02266","SJAG_03160","SJAG_01146","SJAG_03681","SJAG_03067","SJAG_03126","SJAG_03854","SJAG_03927","SJAG_01084","SJAG_05373","SJAG_02169","SJAG_01010","SJAG_02392","SJAG_02336","SJAG_01205","SJAG_02563","SJAG_01873","SJAG_00082","SJAG_01837","SJAG_03695","SJAG_03602","SJAG_01297","SJAG_01401","SJAG_00883","SJAG_00169","SJAG_04597","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115643,103647,90486,108006,106987,114011,113524,99350,111706],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[100295,89756,94168,101192,115747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[91194,111781,116544,98952,93725,99119,72017,109068,100296,79199,106375,70875,74570,116845,115803,78625,117018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[88703,101374,108643,115645,102110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[91071,109420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[94299,95607,98185,115749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[89974,91195,91557,100807,106376,117454,99121,116759,75019,72015,111476,88880,79062,100297,109069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[115298,109656,114244,101551,99194,106077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[67662,102117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001100"},{"annotations":[91503,93097,91923,98634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"},{"annotations":[111183,94128,78260,108327,111567,104254,114213,100752,112225,92983,106407,93333,92690,106771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[93960],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[116417],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cell cycle phase transition.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:22841721","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle phase transition","termid":"GO:1901988"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"negatively_regulates","term_name":"mitotic cell cycle phase 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regulation of mitotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic cell cycle phase transition","type":"exact"},{"name":"down-regulation of mitotic cell cycle phase transition","type":"exact"},{"name":"downregulation of mitotic cell cycle phase transition","type":"exact"},{"name":"inhibition of mitotic cell cycle phase transition","type":"narrow"}],"termid":"GO:1901991","terms_by_termid":{"GO:0001100":null,"GO:0007094":null,"GO:0007095":null,"GO:0010972":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0033314":null,"GO:0044878":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:2000134":null}}


id: PBO:0060843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament medium chain","termid":"PBO:0060843"}


id: PBO:0069048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 294, pseudogene","termid":"PBO:0069048"}


id: MONDO:0020597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiokeratoma that is located on the scrotum.","definition_xrefs":["NCIT:C7752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scrotal hemangioma","termid":"MONDO:0003951"},{"relation_name":"is_a","term_name":"angiokeratoma of Fordyce","termid":"MONDO:0003954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angiokeratoma of scrotum","secondary_identifiers":["SCTID:735082004"],"synonyms":[{"name":"angiokeratoma of fordyce","type":"broad"},{"name":"angiokeratoma of scrotum","type":"exact"},{"name":"angiokeratoma of the scrotum","type":"exact"},{"name":"fordyce angiokeratoma","type":"broad"},{"name":"fordyce-type angiokeratoma of scrotum","type":"exact"},{"name":"fordyce-type angiokeratoma of the scrotum","type":"exact"},{"name":"scrotal angiokeratoma","type":"exact"},{"name":"scrotal fordyce-type angiokeratoma","type":"exact"},{"name":"scrotum angiokeratoma","type":"exact"}],"termid":"MONDO:0020597","xrefs":{"Monarch":{"xref_id":"0020597"}}}


id: PBO:0048564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated, gamma adaptin ear containing, ARF binding protein 2","termid":"PBO:0048564"}


id: GO:0018665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyphenylacetate + NADPH + H+ + O2 = homogentisate + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxyphenylacetate 1-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0300","MetaCyc:1.14.13.18-RXN"],"synonyms":[{"name":"4-HPA 1-hydroxylase activity","type":"related"},{"name":"4-hydroxyphenyl-acetate 1-hydroxylase activity","type":"exact"},{"name":"4-hydroxyphenylacetate 1-hydroxylase activity","type":"related"},{"name":"4-hydroxyphenylacetate,NAD(P)H:oxygen oxidoreductase (1-hydroxylating)","type":"related"},{"name":"4-hydroxyphenylacetic 1-hydroxylase activity","type":"related"}],"termid":"GO:0018665"}


id: GO:0021623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the oculomotor nerve. This process pertains to the initial formation of a structure from unspecified parts. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"oculomotor nerve morphogenesis","termid":"GO:0021622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve formation","synonyms":[{"name":"CN III biosynthesis","type":"related"},{"name":"CN III formation","type":"related"}],"termid":"GO:0021623"}


id: PBO:0045609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 20 (pseudogene)","termid":"PBO:0045609"}


id: GO:0016543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during courtship, where the male orients towards a potential partner. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:sensu","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male courtship behavior","termid":"GO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male courtship behavior, orientation prior to leg tapping and wing vibration","synonyms":[{"name":"male courtship behavior, orientation","type":"related"},{"name":"male courtship behaviour, orientation","type":"related"},{"name":"male courtship behaviour, orientation prior to leg tapping and wing vibration","type":"related"}],"termid":"GO:0016543"}


id: SO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes gain of polypeptide function with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_function_variant","termid":"SO:0001554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_gain_of_function_variant","synonyms":[{"name":"polypeptide gain of function variant","type":"exact"}],"termid":"SO:0001557"}


id: MONDO:0016010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratogenic disorder observed in a newborn or child of a mother who was exposed to warfarin during pregnancy. Manifestations include nasal bridge depression, nasal bones hypoplasia, microcephaly, congenital heart disorders, and brachydactyly.","definition_xrefs":["NCIT:C98906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin K-antagonist embryofetopathy","secondary_identifiers":["ICD9:759.89","MedDRA:10051445","MESH:C536683","Orphanet:1914","icd11.foundation:71579696","SCTID:38323006","MEDGEN:75570","UMLS:C0265374"],"synonyms":[{"name":"DiSala syndrome","type":"related"},{"name":"congenital warfarin syndrome","type":"related"},{"name":"coumarin embryopathy","type":"related"},{"name":"coumarin syndrome","type":"related"},{"name":"di Sala syndrome","type":"exact"},{"name":"embryofetopathy due to oral anticoagulant therapy","type":"related"},{"name":"fetal Coumadin syndrome","type":"exact"},{"name":"fetal anticoagulant syndrome","type":"related"},{"name":"fetal warfarin syndrome","type":"exact"},{"name":"foetal Coumadin syndrome","type":"exact"},{"name":"foetal anticoagulant syndrome","type":"related"},{"name":"foetal warfarin syndrome","type":"exact"},{"name":"vitamin K antagonist embryofetopathy","type":"related"},{"name":"vitamin K antagonist embryopathy","type":"exact"},{"name":"vitamin K antagonists embryofetopathy","type":"related"},{"name":"vitamin K-antagonist embryofetopathy","type":"exact"},{"name":"vitamin K-antagonist embryopathy","type":"exact"},{"name":"warfarin embryofetopathy","type":"exact"},{"name":"warfarin embryopathy","type":"exact"},{"name":"warfarin syndrome","type":"related"}],"termid":"MONDO:0016010","xrefs":{"Monarch":{"xref_id":"0016010"}}}


id: PBO:0059724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 32","termid":"PBO:0059724"}


id: MONDO:1012069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dystrophic epidermolysis bullosa, non-human animal","termid":"MONDO:1011737"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic epidermolysis bullosa, domestic cat","secondary_identifiers":["OMIA:000341-9685"],"termid":"MONDO:1012069","xrefs":{"Monarch":{"xref_id":"1012069"}}}


id: PBO:0026983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_elongated_oscillating_nucleus","termid":"PBO:0026983"}


id: PBO:0028885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_splicing","termid":"PBO:0028885"}


id: SO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_ribosylguanosine_phosphate is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_ribosylguanosine_phosphate","secondary_identifiers":["RNAMOD:036"],"synonyms":[{"name":"2'-O-ribosylguanosine (phosphate)","type":"exact"},{"name":"Gr(p)","type":"exact"},{"name":"two prime O ribosylguanosine phosphate","type":"exact"}],"termid":"SO:0001331"}


id: GO:0006363
data:
  {"annotated_genes":["SJAG_04855","SJAG_04106","SJAG_03689","SJAG_02922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96141,102032,113957,115731],"is_not":false,"summary":null,"term":"GO:0006363"}]},"cv_name":"biological_process","definition":"A transcription termination process that completes the production of a ribosomal RNA transcript. RNAP I termination requires binding of a terminator protein to specific sequences downstream of the transcription unit.","definition_xrefs":["PMID:10684922","GOC:mah","PMID:27371117","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription termination","termid":"GO:0006353"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase I","termid":"GO:0006360"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02922":null,"SJAG_03689":null,"SJAG_04106":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"termination of RNA polymerase I transcription","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019223","GO:0001185","Reactome:R-HSA-73863"],"synonyms":[{"name":"RNA polymerase I transcription termination","type":"exact"},{"name":"RNA polymerase I transcription termination factor activity","type":"related"},{"name":"termination of RNA polymerase I transcription from promoter for nuclear large rRNA transcript","type":"narrow"},{"name":"transcription termination from Pol I promoter","type":"exact"},{"name":"transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"GO:0006363","terms_by_termid":{"GO:0006363":null}}


id: PBO:0031693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_localization","termid":"PBO:0031693"}


id: PBO:0087828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIF (Transcription Factor II) middle subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP30","termid":"PBO:0087828"}


id: FYPO:0000164
data:
  {"alleles_by_uniquename":{"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001971"},{"annotations":[119181,119182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal. Cell separation is the process of physically separating progeny cells after cytokinesis is complete, and involves enzymatic digestion of septum components.","definition_xrefs":["PomBase:mah","GO:0000920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division","termid":"FYPO:0000186"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02252":null,"SJAG_03143":null,"SJAG_03444":null},"genotype_count":3,"genotypes_by_uniquename":{"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]},"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis","references_by_uniquename":{"PMID:22300943":null,"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_03444","SJAG_03143","SJAG_02252"],"single_locus_genotype_uniquenames":["agn1delta","sep1delta","ace2delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation","type":"exact"},{"name":"abnormal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0000164","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001971":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0070309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 15","termid":"PBO:0070309"}


id: GO:0046435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(3-hydroxy)phenylpropionate, a hydroxylated derivative of phenylpropionate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(3-hydroxy)phenylpropionate metabolic process","synonyms":[{"name":"3-(3-hydroxy)phenylpropionate metabolism","type":"exact"}],"termid":"GO:0046435"}


id: GO:0030078
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Light harvesting complex associated with the reaction complex of photosynthetic purple bacteria.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane light-harvesting complex","termid":"GO:0030077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"light-harvesting complex, core complex","termid":"GO:0030078"}


id: SO:0002239
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 28S_rRNA, which functions as a component of the large subunit of the ribosome in eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_28S_gene","synonyms":[{"name":"28S rRNA gene","type":"exact"},{"name":"28S_rRNA_gene","type":"exact"}],"termid":"SO:0002239"}


id: GO:0038131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neuregulin, a member of the EGF family of growth factors, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:16460914","PMID:20672328","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neuregulin receptor activity","synonyms":[{"name":"NRG receptor activity","type":"exact"},{"name":"NRG1 receptor activity","type":"narrow"},{"name":"NRG2 receptor activity","type":"narrow"}],"termid":"GO:0038131"}


id: SO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of one or more sequences of an individual.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_collection","synonyms":[{"name":"variant collection","type":"related"}],"termid":"SO:0001507"}


id: GO:0071211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole using signals contained within the protein, occurring as part of autophagy, the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"},{"relation_name":"part_of","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006605","GO:0006810","GO:0006914","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein targeting to vacuole involved in autophagy","synonyms":[{"name":"protein targeting to autophagosome","type":"related"}],"termid":"GO:0071211"}


id: PBO:0064083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PISRT1 lncRNA","termid":"PBO:0064083"}


id: MONDO:0035557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intermediate atrioventricular septal defect (obsolete MONDO:0035557)","secondary_identifiers":["Orphanet:576242"],"termid":"MONDO:0035557","xrefs":{"Monarch":{"xref_id":"0035557"}}}


id: GO:0048493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the plasma membrane-derived thylakoid, containing either both large and small subunits or just small subunits. It carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatophore ribulose bisphosphate carboxylase complex","termid":"GO:0048494"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid ribulose bisphosphate carboxylase complex","synonyms":[{"name":"RubisCO complex","type":"broad"},{"name":"plasma membrane ribulose bisphosphate carboxylase complex","type":"exact"},{"name":"ribulose bisphosphate carboxylase complex","type":"broad"}],"termid":"GO:0048493"}


id: PR:Q8TFH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB17E12.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFH2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier PB17E12.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.12c","synonyms":[{"name":"Spom972h-SPAPB17E12.12c","type":"exact"}],"termid":"PR:Q8TFH2"}


id: MONDO:0014486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any intellectual disability-expressive aphasia-facial dysmorphism syndrome in which the cause of the disease is a mutation in the ZMYND11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intellectual disability, autosomal dominant 29","termid":"MONDO:0014482"},{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 30","secondary_identifiers":["GARD:13136","DOID:0070060","MEDGEN:863604","OMIM:616083","UMLS:C4015167"],"synonyms":[{"name":"MRD30","type":"exact"},{"name":"ZMYND11 intellectual disability-expressive aphasia-facial dysmorphism syndrome","type":"exact"},{"name":"autosomal dominant intellectual disability 30","type":"exact"},{"name":"autosomal dominant mental retardation 30","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 30","type":"related"},{"name":"intellectual disability, autosomal dominant 30","type":"exact"},{"name":"intellectual disability, autosomal dominant type 30","type":"exact"},{"name":"intellectual disability-expressive aphasia-facial dysmorphism syndrome caused by mutation in ZMYND11","type":"exact"},{"name":"mental retardation, autosomal dominant 30","type":"related"},{"name":"mental retardation, autosomal dominant type 30","type":"exact"}],"termid":"MONDO:0014486","xrefs":{"Monarch":{"xref_id":"0014486"}}}


id: GO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inward rectifier channel (obsolete GO:0005241)","synonyms":[{"name":"inward rectifier channel","type":"exact"}],"termid":"GO:0005241"}


id: PBO:0050303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 5","termid":"PBO:0050303"}


id: CHEBI:17568
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil","termid":"CHEBI:17568"}


id: MONDO:0007741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hydronephrosis is a renal urinary disease characterized by distension and dilation of the renal pelvis and calyces secondary to various congenital obstructive malformations of the kidneys and urinary tract that can evolve to renal atrophy.","definition_xrefs":["Orphanet:2190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydronephrosis","termid":"MONDO:0005510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital hydronephrosis","secondary_identifiers":["ICD10CM:Q62.0","icd11.foundation:808343797","MEDGEN:78594","UMLS:C0266316","SCTID:16297002","NANDO:2200176","MedDRA:10050975","ICD9:753.29","NCIT:C102979"],"termid":"MONDO:0007741","xrefs":{"Monarch":{"xref_id":"0007741"}}}


id: PBO:0091747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter Sul1","termid":"PBO:0091747"}


id: MONDO:0018463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild phosphoribosylpyrophosphate (PRPP) synthetase superactivity is the mild and late-onset form of PRPP synthetase superactivity, an X-linked disorder of purine metabolism associated with hyperuricemia and hyperuricosuria, leading to urolithiasis and gout. This form is not associated with any neuropathy or central nervous system (CNS) disorders.","definition_xrefs":["Orphanet:411536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoribosylpyrophosphate synthetase superactivity","termid":"MONDO:0010395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"mild phosphoribosylpyrophosphate synthetase superactivity","secondary_identifiers":["MEDGEN:1843112","GARD:17681","UMLS:C5680016"],"synonyms":[{"name":"mild PRPP synthetase superactivity","type":"exact"},{"name":"mild PRPS1 superactivity","type":"exact"}],"termid":"MONDO:0018463","xrefs":{"Monarch":{"xref_id":"0018463"}}}


id: MONDO:0013976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pure hair and nail ectodermal dysplasia in which the cause of the disease is a mutation in the HOXC13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hair and nail ectodermal dysplasia","termid":"MONDO:0019071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 9, hair/nail type","secondary_identifiers":["MEDGEN:767041","UMLS:C3554127","OMIM:614931","GARD:18066","DOID:0111656"],"synonyms":[{"name":"ECTD9","type":"related"},{"name":"HOXC13 pure hair and nail ectodermal dysplasia","type":"exact"},{"name":"ectodermal dysplasia 9, hair/nail type","type":"exact"},{"name":"pure hair and nail ectodermal dysplasia caused by mutation in HOXC13","type":"exact"}],"termid":"MONDO:0013976","xrefs":{"Monarch":{"xref_id":"0013976"}}}


id: PBO:0090572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (AGC family) Gad8","termid":"PBO:0090572"}


id: RO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and m when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that crosses m.","direct_ancestors":[{"relation_name":"is_a","term_name":"occurs_across","termid":"RO:0002021"},{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"RO:0002344"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_transport_across","termid":"RO:0002342"}


id: MONDO:0021096
data:
  {"annotated_genes":["SJAG_01144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01144":null},"genotype_count":0,"is_obsolete":false,"name":"papillary epithelial neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:235456","NCIT:C8429","UMLS:C1335324"],"synonyms":[{"name":"papillary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0021096","terms_by_termid":{"MONDO:0003789":null},"xrefs":{"Monarch":{"xref_id":"0021096"}}}


id: PBO:0050711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 9","termid":"PBO:0050711"}


id: GO:0061118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"regulates","term_name":"chemotaxis to cAMP","termid":"GO:0043327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP","termid":"GO:0061118"}


id: GO:1904725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any TFIIB-class transcription factor binding that is involved in negative regulation of DNA-templated transcription.","definition_xrefs":["GOC:TermGenie","GO_REF:0000061","PMID:12461786","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIB-class transcription factor binding involved in negative regulation of transcription (obsolete GO:1904725)","synonyms":[{"name":"TFIIB-class transcription factor binding involved in down regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in down regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in down-regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in down-regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in downregulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in downregulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in inhibition of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in inhibition of transcription, DNA-dependent","type":"narrow"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of transcription, DNA-templated","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in transcription repressor activity","type":"related"}],"termid":"GO:1904725"}


id: FYPO:0002591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation is abnormal. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone phosphorylation during vegetative growth","synonyms":[{"name":"abnormal histone phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002591"}


id: PBO:0050633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked member 3","termid":"PBO:0050633"}


id: GO:0016879
data:
  {"annotated_genes":["SJAG_02832","SJAG_05560","SJAG_01164","SJAG_03355","SJAG_04577","SJAG_03313","SJAG_04634","SJAG_05024","SJAG_03298","SJAG_03140","SJAG_01897","SJAG_00529","SJAG_01351","SJAG_02721","SJAG_03679","SJAG_04544","SJAG_03069","SJAG_04549","SJAG_00392","SJAG_00044","SJAG_00106","SJAG_00988","SJAG_00412","SJAG_02618","SJAG_02364","SJAG_00359","SJAG_01139","SJAG_01616","SJAG_04031","SJAG_01845","SJAG_05249","SJAG_00673","SJAG_00964","SJAG_01577","SJAG_03224","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030272"},{"annotations":[78649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004019"},{"annotations":[93866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097429"},{"annotations":[70192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004055"},{"annotations":[79030,57631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004066"},{"annotations":[65844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004075"},{"annotations":[78615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004077"},{"annotations":[71004,93190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004087"},{"annotations":[71718,106279,70142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004088"},{"annotations":[74711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003883"},{"annotations":[76010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004141"},{"annotations":[79020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008841"},{"annotations":[76816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017178"},{"annotations":[64864,64072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004329"},{"annotations":[77106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004357"},{"annotations":[61250,71151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004356"},{"annotations":[71557,74888,118141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050567"},{"annotations":[70229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004363"},{"annotations":[93193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003922"},{"annotations":[74540],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0003921"},{"annotations":[104999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016979"},{"annotations":[77260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003952"},{"annotations":[79911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004516"},{"annotations":[72032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004592"},{"annotations":[78361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004632"},{"annotations":[70442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004637"},{"annotations":[76564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004639"},{"annotations":[70443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004641"},{"annotations":[69666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004642"},{"annotations":[79022,72115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004326"},{"annotations":[65106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032267"},{"annotations":[88002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004835"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of two molecules, or two groups within a single molecule, via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase 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activity, forming carbon-nitrogen bonds","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"other carbon-nitrogen ligase activity","type":"narrow"}],"termid":"GO:0016879","terms_by_termid":{"GO:0003883":null,"GO:0003921":null,"GO:0003922":null,"GO:0003952":null,"GO:0004019":null,"GO:0004055":null,"GO:0004066":null,"GO:0004075":null,"GO:0004077":null,"GO:0004087":null,"GO:0004088":null,"GO:0004141":null,"GO:0004326":null,"GO:0004329":null,"GO:0004356":null,"GO:0004357":null,"GO:0004363":null,"GO:0004516":null,"GO:0004592":null,"GO:0004632":null,"GO:0004637":null,"GO:0004639":null,"GO:0004641":null,"GO:0004642":null,"GO:0004835":null,"GO:0008841":null,"GO:0016979":null,"GO:0017178":null,"GO:0030272":null,"GO:0032267":null,"GO:0050567":null,"GO:0097429":null}}


id: GO:0075174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its cAMP-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP-mediated signaling in response to host (obsolete GO:0075174)","synonyms":[{"name":"regulation of cAMP-mediated signal transduction in response to host","type":"exact"},{"name":"regulation of cAMP-mediated signalling in response to host","type":"exact"},{"name":"regulation of symbiont cAMP-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075174"}


id: PBO:0040060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 5","termid":"PBO:0040060"}


id: GO:0032276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a gonadotropin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of gonadotropin secretion","synonyms":[{"name":"regulation of gonadotrophin secretion","type":"exact"}],"termid":"GO:0032276"}


id: PBO:0042470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 7 like","termid":"PBO:0042470"}


id: GO:1900162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid scramblase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phospholipid scramblase activity (obsolete GO:1900162)","synonyms":[{"name":"down regulation of phospholipid scramblase activity","type":"exact"},{"name":"down-regulation of phospholipid scramblase activity","type":"exact"},{"name":"downregulation of phospholipid scramblase activity","type":"exact"},{"name":"inhibition of phospholipid scramblase activity","type":"narrow"}],"termid":"GO:1900162"}


id: PBO:0060680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDP antisense RNA 1","termid":"PBO:0060680"}


id: MONDO:1012270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombasthenia, non-human animal","termid":"MONDO:1011694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombasthenia, dog","secondary_identifiers":["OMIA:001000-9615"],"termid":"MONDO:1012270","xrefs":{"Monarch":{"xref_id":"1012270"}}}


id: GO:0044864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process where an infecting virus activates or increases the frequency, rate or extent of its host's cell division.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by virus of host cell division (obsolete GO:0044864)","termid":"GO:0044864"}


id: PBO:0003007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal of transmembrane channel, trunucated","termid":"PBO:0003007"}


id: GO:1903125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A peptidyl-threonine phosphorylation that results in negative regulation of thioredoxin peroxidase activity.","definition_xrefs":["GOC:bf","PMID:21850687","GOC:PARL","GOC:TermGenie","GO_REF:0000063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation","synonyms":[{"name":"negative regulation of TPx activity by peptidyl-threonine phosphorylation","type":"exact"},{"name":"negative regulation of TrxPx activity by peptidyl-threonine phosphorylation","type":"exact"},{"name":"negative regulation of thiol peroxidase activity by peptidyl-threonine phosphorylation","type":"exact"}],"termid":"GO:1903125"}


id: MONDO:0003661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the breast. There is no history of extramammary breast lymphoma and ipsilateral axillary lymph node involvement does not exclude the diagnosis of primary breast lymphoma. Most patients present with a painless breast lump. The vast majority of cases are B-cell non-Hodgkin lymphomas. Diffuse large B-cell lymphoma, follicular lymphoma, and extranodal marginal zone B-cell lymphoma of mucosa associated lymphoid tissue are the most common types of primary non-Hodgkin lymphoma of the breast. Primary Hodgkin lymphoma of the breast is rare.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"breast cancer","termid":"MONDO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"breast lymphoma","secondary_identifiers":["UMLS:C1704251","SCTID:278052009","MEDGEN:309939","NCIT:C4671","DOID:5826"],"synonyms":[{"name":"breast lymphoma","type":"exact"},{"name":"lymphoma of breast","type":"exact"},{"name":"lymphoma of the breast","type":"exact"},{"name":"malignant lymphoma of breast","type":"exact"},{"name":"primary breast lymphoma","type":"exact"}],"termid":"MONDO:0003661","xrefs":{"Monarch":{"xref_id":"0003661"}}}


id: MONDO:0010887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anterior cervical hypertrichosis is a rare form of localized hypertrichosis characterized by hair growth near the laryngeal prominence during childhood.","definition_xrefs":["Orphanet:3387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated anterior cervical hypertrichosis","secondary_identifiers":["GARD:8438","SCTID:717963001","MESH:C538390","OMIM:600457","MEDGEN:325346","UMLS:C1838123"],"synonyms":[{"name":"Tsukahara Kajii syndrome","type":"related"},{"name":"Tsukahara-Kajii syndrome","type":"exact"},{"name":"anterior cervical hypertrichosis","type":"related"},{"name":"hairy throat","type":"related"},{"name":"hairy throat syndrome","type":"exact"},{"name":"hypertrichosis, anterior cervical","type":"related"}],"termid":"MONDO:0010887","xrefs":{"Monarch":{"xref_id":"0010887"}}}


id: PBO:0055307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2734","termid":"PBO:0055307"}


id: PBO:0047185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 204 member A","termid":"PBO:0047185"}


id: PR:O74564
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.11c","synonyms":[{"name":"Spom972h-wtf9","type":"exact"}],"termid":"PR:O74564"}


id: GO:0008574
data:
  {"annotated_genes":["SJAG_00773","SJAG_00851","SJAG_01297","SJAG_04745","SJAG_02336","SJAG_00332","SJAG_00930"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75470,75712,77483,78525,103303,103505,108022],"is_not":false,"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule toward the plus end, driven by ATP hydrolysis.","definition_xrefs":["GOC:vw","PMID:32842864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule motor activity","termid":"GO:0003777"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_02336":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003774","GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"plus-end-directed microtubule motor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.6.4.4-RXN","EC:5.6.1.3"],"synonyms":[{"name":"ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"ATP-dependent plus-end-directed microtubule motor activity","type":"exact"},{"name":"kinesin ATP phosphohydrolase (plus-end-directed)","type":"narrow"},{"name":"kinesin activity","type":"related"},{"name":"microtubule motor activity, plus-end-directed","type":"exact"},{"name":"plus-end-directed ATP-dependent microtubule motor activity","type":"exact"},{"name":"plus-end-directed kinesin ATPase activity","type":"narrow"}],"termid":"GO:0008574","terms_by_termid":{"GO:0008574":null}}


id: PBO:0046036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 4","termid":"PBO:0046036"}


id: PBO:0075376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 13","termid":"PBO:0075376"}


id: GO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing entity that serves as an electron acceptor and electron donor in an electron transport system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete copper electron carrier (obsolete GO:0015003)","synonyms":[{"name":"copper electron carrier","type":"exact"}],"termid":"GO:0015003"}


id: PBO:0082362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-specific protein required for autophagosome formation; forms a complex with Atg17p and Atg29p that localizes other proteins to the pre-autophagosomal structure; constitutively phosphorylated, and phosphorylation of residue S174 is required for function; high-copy suppressor of CIK1 deletion","termid":"PBO:0082362"}


id: PBO:0062539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 4","termid":"PBO:0062539"}


id: PBO:0058858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8087","termid":"PBO:0058858"}


id: PBO:0065958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23 homolog B, nucleotide excision repair protein","termid":"PBO:0065958"}


id: PR:O94416
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIF subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13011:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIF subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.09c","secondary_identifiers":["UniProtKB:O94416"],"synonyms":[{"name":"SPCC1620.09c","type":"related"},{"name":"Spom972h-GTF2F1","type":"exact"},{"name":"TFIIF large subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TFIIF-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94416"}


id: GO:0042509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:11426647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"},{"relation_name":"regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042516","GO:0042519","GO:0042528","GO:0042522","GO:0042510","GO:0042525","GO:0042513"],"synonyms":[{"name":"regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042509"}


id: MONDO:0017494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital absence of upper arm and forearm with hand present, unilateral (obsolete MONDO:0017494)","secondary_identifiers":["Orphanet:295085"],"synonyms":[{"name":"humero-radio-ulnar intercalary transverse meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017494","xrefs":{"Monarch":{"xref_id":"0017494"}}}


id: GO:0019025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A single stranded RNA genome with the same nucleotide polarity as mRNA.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete positive sense viral genome (obsolete GO:0019025)","termid":"GO:0019025"}


id: GO:0102804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oripavine + 2-oxoglutarate + O2 = morphinone + formaldehyde + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oripavine 6-O-demethylase activity (obsolete GO:0102804)","termid":"GO:0102804"}


id: GO:2000421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil extravasation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular extravasation","termid":"GO:0002693"},{"relation_name":"is_a","term_name":"positive regulation of eosinophil migration","termid":"GO:2000418"},{"relation_name":"is_a","term_name":"regulation of eosinophil extravasation","termid":"GO:2000419"},{"relation_name":"positively_regulates","term_name":"eosinophil extravasation","termid":"GO:0072682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eosinophil extravasation","termid":"GO:2000421"}


id: PBO:0091967
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cut Eight suppressing Kinase","termid":"PBO:0091967"}


id: PBO:0084304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron-sulfur protein required for synthesis of wybutosine modified tRNA; wybutosine is a modified guanosine found at 3'-position adjacent to anticodon of phenylalanine tRNA which supports reading frame maintenance by stabilizing codon-anticodon interactions; induction by Yap5p in response to iron provides protection from high iron toxicity; overexpression results in increased cellular iron","termid":"PBO:0084304"}


id: GO:0090601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleation","termid":"GO:0090601"}


id: PBO:0055761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA imatinib upregulated","termid":"PBO:0055761"}


id: MONDO:0011981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thyroid disease, susceptibility to","termid":"MONDO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thyroid disease, susceptibility to, 2","secondary_identifiers":["MEDGEN:334159","OMIM:608174","UMLS:C1842445"],"synonyms":[{"name":"AITD2","type":"related"},{"name":"autoimmune thyroid disease, susceptibility to, 2","type":"exact"},{"name":"autoimmune thyroid disease, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0011981","xrefs":{"Monarch":{"xref_id":"0011981"}}}


id: PBO:0069513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 782, pseudogene","termid":"PBO:0069513"}


id: PBO:0056300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 gamma","termid":"PBO:0056300"}


id: MONDO:0002720
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that occurs in sella turcica. Representative examples include craniopharyngioma and pituitary gland adenoma.","definition_xrefs":["NCIT:C4944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base neoplasm","termid":"MONDO:0002785"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"sella turcica neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0748616","DOID:3643","MEDGEN:148188","ONCOTREE:SELT"],"synonyms":[{"name":"neoplasm of sella turcica","type":"exact"},{"name":"neoplasm of the sella turcica","type":"exact"},{"name":"sella turcica neoplasm","type":"exact"},{"name":"sella turcica tumor","type":"exact"},{"name":"sella turcica tumour","type":"exact"},{"name":"sellar neoplasm","type":"exact"},{"name":"sellar tumor","type":"exact"},{"name":"sellar tumour","type":"exact"},{"name":"selt","type":"related"},{"name":"tumor of sella turcica","type":"exact"},{"name":"tumor of the sella turcica","type":"exact"},{"name":"tumour of sella turcica","type":"exact"},{"name":"tumour of the sella turcica","type":"exact"}],"termid":"MONDO:0002720","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0002720"}}}


id: MONDO:0018235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with limb anomaly as a major feature (obsolete MONDO:0018235)","secondary_identifiers":["Orphanet:364568"],"termid":"MONDO:0018235","xrefs":{"Monarch":{"xref_id":"0018235"}}}


id: GO:0102050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-tyrosine + ATP(4-) = H+ + indole-3-acetyl-tyrosine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-tyrosine synthetase activity (obsolete GO:0102050)","termid":"GO:0102050"}


id: FYPO:0005846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of H3-K9 specific histone methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000654","FYPO:0000661","FYPO:0005447","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"abnormal H3-K9 specific histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0005846"}


id: MONDO:0010402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic X-linked intellectual disability characterized by moderate intellectual disability with variable occurrence of asthenic body habitus, dysmorphic features, autistic features, macrocephaly, seizures, myoclonic jerks, and hyporeflexia that has material basis in mutation in the GRIA3 gene on chromosome Xq25.","definition_xrefs":["PMID:24721225","PMID:17989220","DOID:0060823","PMID:19449417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic X-linked intellectual disability 94","secondary_identifiers":["OMIM:300699","MESH:C567479","UMLS:C2678051","MEDGEN:437111"],"synonyms":[{"name":"MRX94","type":"exact"},{"name":"MRXS29","type":"exact"},{"name":"MRXSW","type":"related"},{"name":"intellectual developmental disorder, X-linked, syndromic, Wu type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 94","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 29","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Wu type","type":"related"},{"name":"mental retardation, X-linked 94","type":"exact"},{"name":"mental retardation, X-linked, syndromic 29","type":"related"},{"name":"mental retardation, X-linked, syndromic, Wu type","type":"related"},{"name":"syndromic X-linked intellectual disability 29","type":"exact"},{"name":"syndromic X-linked intellectual disability 94","type":"exact"},{"name":"syndromic X-linked intellectual disability Wu type","type":"exact"},{"name":"syndromic X-linked intellectual disability due to GRIA3 anomalies","type":"exact"},{"name":"syndromic X-linked intellectual disability type 94","type":"exact"},{"name":"syndromic X-linked mental retardation 29","type":"exact"},{"name":"syndromic X-linked mental retardation Wu type","type":"exact"}],"termid":"MONDO:0010402","xrefs":{"Monarch":{"xref_id":"0010402"}}}


id: GO:0033058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another along an axis.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"directional locomotion","termid":"GO:0033058"}


id: GO:0075088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont G protein-coupled receptor signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont G protein-coupled receptor signal transduction (obsolete GO:0075088)","synonyms":[{"name":"positive regulation by host of symbiont G-protein coupled receptor protein signal transduction","type":"exact"}],"termid":"GO:0075088"}


id: PBO:0054762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2174","termid":"PBO:0054762"}


id: GO:0052585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-NH2 group of donors, with a quinone or similar compound as acceptor (obsolete GO:0052585)","termid":"GO:0052585"}


id: GO:0072368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lipid transport by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0072368)","synonyms":[{"name":"regulation of lipid transport by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072368"}


id: PBO:0072533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 63","termid":"PBO:0072533"}


id: PBO:0049608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 11","termid":"PBO:0049608"}


id: PBO:0089636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14","termid":"PBO:0089636"}


id: PBO:0070810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 40","termid":"PBO:0070810"}


id: PBO:0055526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2960","termid":"PBO:0055526"}


id: PBO:0043594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXIV alpha 1 chain","termid":"PBO:0043594"}


id: GO:0140968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of various organic cations in exchange for a proton, according to the reaction: H+(out) + organic cation(in) = H+(in) + organic cation(out). The transported substrates are usually toxic molecules, drugs and xenobiotics.","definition_xrefs":["PMID:17047166","PMID:17509534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"polyspecific organic cation:proton antiporter activity","secondary_identifiers":["TC:2.A.66.1.20"],"synonyms":[{"name":"proton:polyspecific organic cation antiporter activity","type":"related"}],"termid":"GO:0140968"}


id: GO:0019992
data:
  {"annotated_genes":["SJAG_03488","SJAG_04479"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102495,116243],"is_not":false,"summary":null,"term":"GO:0019992"}]},"cv_name":"molecular_function","definition":"Binding to a diacylglycerol, a diester of glycerol and two fatty acids.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03488":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"diacylglycerol binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-400015"],"termid":"GO:0019992","terms_by_termid":{"GO:0019992":null}}


id: PBO:0004643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Ykt6 (predicted)","termid":"PBO:0004643"}


id: PBO:0059032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 21","termid":"PBO:0059032"}


id: PBO:0064663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4F","termid":"PBO:0064663"}


id: MONDO:0011292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dermatitis, atopic (obsolete MONDO:0011292)","termid":"MONDO:0011292","xrefs":{"Monarch":{"xref_id":"0011292"}}}


id: PBO:0076075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase receptor associated protein","termid":"PBO:0076075"}


id: MONDO:0003761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from leptomeningeal melanocytes.","definition_xrefs":["NCIT:C5317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant leptomeningeal tumor","termid":"MONDO:0003762"},{"relation_name":"is_a","term_name":"primary melanoma of the central nervous system","termid":"MONDO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"leptomeningeal melanoma","secondary_identifiers":["SCTID:277530005","DOID:6085","MEDGEN:272793","UMLS:C1334386"],"synonyms":[{"name":"leptomeningeal melanoma","type":"exact"},{"name":"leptomeninx melanoma","type":"exact"},{"name":"leptomeninx melanoma (disease)","type":"exact"},{"name":"malignant melanoma of meninges","type":"exact"},{"name":"melanoma (disease) of leptomeninx","type":"exact"},{"name":"melanoma of leptomeninges","type":"related"},{"name":"melanoma of the leptomeninges","type":"exact"},{"name":"meningeal melanoma","type":"exact"}],"termid":"MONDO:0003761","xrefs":{"Monarch":{"xref_id":"0003761"}}}


id: GO:0048206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from the cis-Golgi to the rough ER.","definition_xrefs":["PMID:10219233","GOC:mah","ISBN:0716731363","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"},{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"vesicle targeting, cis-Golgi to rough endoplasmic reticulum","synonyms":[{"name":"cis-Golgi to rough ER targeting","type":"exact"},{"name":"cis-Golgi to rough endoplasmic reticulum targeting","type":"exact"},{"name":"vesicle targeting, cis-Golgi to rough ER","type":"exact"}],"termid":"GO:0048206"}


id: GO:0102856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-18:2-sn-glycerol-3-phosphocholine + O2 + a reduced electron acceptor = 1-18:3-2-18:2-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-18:2-sn-glycerol-3-phosphocholine desaturase activity (obsolete GO:0102856)","termid":"GO:0102856"}


id: GO:0071914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular membrane-bounded vesicle that contains prominin proteins (in mouse Prom1/CD33 or Prom2) and are found in body fluids including ventricular fluid, saliva, urine and seminal fluid. In the ventricular fluid of the developing mouse brain two major classes of these particles have been observed (P2 particles of 500-1000 nm and P4 particles of 50-80 nm) which likely originate from microvilli, primary cilia and/or the midbody of neuroepithelial cells. The physiological role is not known.","definition_xrefs":["PMID:17109118","PMID:15976444","GOC:vesicles","PMID:17283184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"prominosome","synonyms":[{"name":"prominin-containing extracellular membrane vesicle","type":"exact"}],"termid":"GO:0071914"}


id: PBO:0058662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6790","termid":"PBO:0058662"}


id: PBO:0080498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor pseudogene 1","termid":"PBO:0080498"}


id: GO:0005400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal membrane transporter (obsolete GO:0005400)","synonyms":[{"name":"peroxisomal membrane transporter","type":"exact"}],"termid":"GO:0005400"}


