# terms

id: PBO:0091447
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-Glucan Synthase","termid":"PBO:0091447"}


id: FYPO:0006738
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of beta-hibitakanine. Normally, wild-type cell populations survive longer in the presence of beta-hibitakanine than in its absence.","definition_xrefs":["PMID:29900664","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"stationary phase viability unaffected by beta-hibitakanine","synonyms":[{"name":"chronological lifespan unaffected by beta-hibitakanine","type":"related"},{"name":"loss of chronological lifespan extension by beta-hibitakanine","type":"related"},{"name":"loss of stationary phase viability extension in presence of beta-hibitakanine","type":"exact"}],"termid":"FYPO:0006738"}


id: PBO:0073458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A1","termid":"PBO:0073458"}


id: PBO:0086537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YBL071C is not an essential gene","termid":"PBO:0086537"}


id: PBO:0087341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific translational activator for the mitochondrial COX1 mRNA; loosely associated with the matrix face of the mitochondrial inner membrane; localizes to vacuole membrane in response to H2O2; influences both COX1 mRNA translation and Cox1p assembly into cytochrome c oxidase; binds to heme B, which may be a mechanism for sensing oxygen levels in order to regulate cytochrome c oxidase biogenesis","termid":"PBO:0087341"}


id: PBO:0041972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC13 antisense RNA 2","termid":"PBO:0041972"}


id: MONDO:0007733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any holoprosencephaly in which the cause of the disease is a mutation in the SHH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 3","secondary_identifiers":["MEDGEN:327125","DOID:0110875","OMIM:142945","MESH:C564181","UMLS:C1840529"],"synonyms":[{"name":"HLP3","type":"exact"},{"name":"HPE3","type":"exact"},{"name":"Hlp3","type":"related"},{"name":"SHH holoprosencephaly","type":"exact"},{"name":"Shh holoprosencephaly","type":"exact"},{"name":"holoprosencephaly 3","type":"exact"},{"name":"holoprosencephaly caused by mutation in SHH","type":"exact"},{"name":"holoprosencephaly caused by mutation in Shh","type":"exact"},{"name":"holoprosencephaly type 3","type":"exact"}],"termid":"MONDO:0007733","xrefs":{"Monarch":{"xref_id":"0007733"}}}


id: GO:0009103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:mr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0005975"],"is_obsolete":false,"name":"lipopolysaccharide biosynthetic process","secondary_identifiers":["KEGG_PATHWAY:map00540"],"synonyms":[{"name":"LPS biosynthetic process","type":"exact"},{"name":"lipopolysaccharide anabolism","type":"exact"},{"name":"lipopolysaccharide biosynthesis","type":"exact"},{"name":"lipopolysaccharide formation","type":"exact"},{"name":"lipopolysaccharide synthesis","type":"exact"}],"termid":"GO:0009103"}


id: PBO:0048041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSIP2 antisense RNA 2","termid":"PBO:0048041"}


id: PR:O94358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC428.10 gene.","definition_xrefs":["UniProtKB:O94358","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C428.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.10","synonyms":[{"name":"Spom972h-SPBC428.10","type":"exact"}],"termid":"PR:O94358"}


id: MONDO:1012378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pancreatitis, non-human animal","termid":"MONDO:1011679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary pancreatitis, dog","secondary_identifiers":["OMIA:001403-9615"],"termid":"MONDO:1012378","xrefs":{"Monarch":{"xref_id":"1012378"}}}


id: GO:0009004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of N-terminal leader sequences from secreted and periplasmic proteins precursor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptidase I activity (obsolete GO:0009004)","synonyms":[{"name":"Escherichia coli leader peptidase","type":"narrow"},{"name":"HOSP","type":"related"},{"name":"PuIO prepilin peptidase","type":"narrow"},{"name":"SPC","type":"related"},{"name":"SPase I activity","type":"related"},{"name":"bacterial leader peptidase 1","type":"related"},{"name":"bacterial leader peptidase I activity","type":"narrow"},{"name":"eukaryotic signal peptidase","type":"narrow"},{"name":"eukaryotic signal proteinase","type":"narrow"},{"name":"leader peptidase I","type":"related"},{"name":"leader peptidase activity","type":"related"},{"name":"leader peptide hydrolase activity","type":"related"},{"name":"leader proteinase activity","type":"related"},{"name":"phage-procoat-leader peptidase activity","type":"narrow"},{"name":"pilin leader peptidase","type":"narrow"},{"name":"prokaryotic leader peptidase","type":"narrow"},{"name":"prokaryotic signal peptidase","type":"narrow"},{"name":"prokaryotic signal proteinase","type":"narrow"},{"name":"propeptidase activity","type":"related"},{"name":"signal peptidase I activity","type":"exact"},{"name":"signal peptide hydrolase activity","type":"related"},{"name":"signal proteinase activity","type":"related"},{"name":"signalase activity","type":"related"}],"termid":"GO:0009004"}


id: GO:0046968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a peptide antigen into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"peptide antigen transport","termid":"GO:0046968"}


id: PBO:0055240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2667","termid":"PBO:0055240"}


id: FYECO:0000073
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where DHA (dihydroxyacetone) is the main carbon source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHA minimal medium","synonyms":[{"name":"DHA MM","type":"exact"},{"name":"dihydroxyacetone MM","type":"exact"},{"name":"dihydroxyactone minimal medium","type":"exact"}],"termid":"FYECO:0000073"}


id: PBO:0079445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB like protein 3","termid":"PBO:0079445"}


id: PBO:0062759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 4","termid":"PBO:0062759"}


id: GO:0051115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient uridylylation of peptidyl-histidine to form 1'-(phospho-5'-uridine)-L-histidine (otherwise known as tau-UMP-histidine, tele-UMP-histidine).","definition_xrefs":["RESID:AA0372"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 1'-(phospho-5'-uridine)-L-histidine (obsolete GO:0051115)","termid":"GO:0051115"}


id: PBO:0011132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted), DUF1773 family protein 6","termid":"PBO:0011132"}


id: GO:0035370
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A heterodimeric ubiquitin conjugating enzyme complex that catalyzes assembly of K63-linked polyubiquitin chains and is involved in NF-kappaB activation. In humans at least, the complex comprises the ubiquitin-conjugating enzyme UBC13 and ubiquitin-conjugating enzyme variant 1A (UEV1A).","definition_xrefs":["GOC:amm","PMID:16129784"],"gene_count":0,"genotype_count":0,"name":"obsolete UBC13-UEV1A complex (obsolete GO:0035370)","termid":"GO:0035370"}


id: GO:0004738
data:
  {"annotated_genes":["SJAG_02006","SJAG_03064"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78814,72563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004739"}]},"cv_name":"molecular_function","definition":"Catalysis of the oxidative decarboxylation of pyruvate.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02006":null,"SJAG_03064":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyruvate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyruvic acid dehydrogenase activity","type":"related"},{"name":"pyruvic dehydrogenase activity","type":"related"}],"termid":"GO:0004738","terms_by_termid":{"GO:0004739":null}}


id: PATO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratification","termid":"PATO:0002067"}


id: PBO:0072168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 5","termid":"PBO:0072168"}


id: MONDO:0010952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary hyperferritinemia with congenital cataracts is characterized by the association of early onset (although generally absent at birth) cataract with persistently raised plasma ferritin concentrations in the absence of iron overload.","definition_xrefs":["Orphanet:163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hereditary hyperferritinemia with congenital cataracts","secondary_identifiers":["DOID:0111256","ICD9:289.89","ICD9:366.44","MESH:C538137","UMLS:C1833213","GARD:2806","NORD:1264","OMIM:600886","SCTID:702398007","MEDGEN:318812"],"synonyms":[{"name":"Bonneau-Beaumont syndrome","type":"exact"},{"name":"HHCS","type":"exact"},{"name":"HRFTC","type":"related"},{"name":"Hyperferritinemia Cataract Syndrome","type":"exact"},{"name":"cataract-hyperferritinemia syndrome","type":"related"},{"name":"hereditary hyperferritinemia cataract syndrome","type":"related"},{"name":"hereditary hyperferritinemia-cataract syndrome","type":"exact"},{"name":"hyperferritinemia cataract syndrome","type":"related"},{"name":"hyperferritinemia with or without cataract","type":"related"},{"name":"hyperferritinemia, hereditary, with congenital cataracts","type":"related"},{"name":"hyperferritinemia-cataract syndrome","type":"related"}],"termid":"MONDO:0010952","xrefs":{"Monarch":{"xref_id":"0010952"}}}


id: PBO:0091469
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli mutY","termid":"PBO:0091469"}


id: PR:Q9UTM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox1101 gene.","definition_xrefs":["UniProtKB:Q9UTM2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rsm22-cox11 tandem protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.04c","synonyms":[{"name":"Spom972h-cox1101","type":"exact"}],"termid":"PR:Q9UTM2"}


id: PBO:0031183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mating_efficiency","termid":"PBO:0031183"}


id: PR:Q9UTG3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1805.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTG3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1805.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.14","synonyms":[{"name":"Spom972h-SPAC1805.14","type":"exact"}],"termid":"PR:Q9UTG3"}


id: PBO:0054059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1402","termid":"PBO:0054059"}


id: FYPO:0002159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased glucosyltransferase activity","termid":"FYPO:0001088"},{"relation_name":"is_a","term_name":"abnormal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased 1,3-beta-D-glucan synthase activity","synonyms":[{"name":"reduced 1,3-beta-D-glucan synthase activity","type":"exact"}],"termid":"FYPO:0002159"}


id: PR:P36613
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03043","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin mcs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.02","secondary_identifiers":["UniProtKB:P36613"],"synonyms":[{"name":"Spom972h-CCNH","type":"exact"},{"name":"mitotic catastrophe suppressor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36613"}


id: MONDO:0013972
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86970],"is_not":false,"summary":null,"term":"MONDO:0013972"}]},"cv_name":"mondo","definition":"Any Perrault syndrome in which the cause of the disease is a mutation in the HARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0005066","MONDO:0004069","MONDO:0006025"],"is_obsolete":false,"name":"Perrault syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3554105","MEDGEN:767019","GARD:15882","OMIM:614926","Orphanet:642976"],"synonyms":[{"name":"HARS2 Perrault syndrome","type":"exact"},{"name":"PRLTS2","type":"related"},{"name":"Perrault syndrome 2","type":"exact"},{"name":"Perrault syndrome caused by mutation in HARS2","type":"exact"},{"name":"Perrault syndrome type 2","type":"exact"}],"termid":"MONDO:0013972","terms_by_termid":{"MONDO:0013972":null},"xrefs":{"Monarch":{"xref_id":"0013972"}}}


id: PBO:0030908
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_vegetative_growth","termid":"PBO:0030908"}


id: PBO:0080868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YJU2 splicing factor homolog","termid":"PBO:0080868"}


id: GO:0030416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylamine (CH3NH2).","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methylamine metabolic process","synonyms":[{"name":"methylamine metabolism","type":"exact"},{"name":"methylammonium metabolic process","type":"exact"},{"name":"methylammonium metabolism","type":"exact"}],"termid":"GO:0030416"}


id: MOD:00950
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decomposed carboxymethylated methionine","termid":"MOD:00950"}


id: FYPO:0002444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the cytoplasm, visible as foci or dots by microscopy, is abnormally localized such that dots cannot be observed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"loss of punctate cytoplasmic protein localization","synonyms":[{"name":"abolished punctate cytoplasmic protein localization","type":"exact"},{"name":"cytoplasmic dots absent","type":"related"},{"name":"loss of punctate cytoplasmic protein localisation","type":"exact"},{"name":"loss of punctate cytoplasmic protein localization during mitotic cell cycle","type":"related"},{"name":"loss of punctate cytoplasmic protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0002444"}


id: GO:0015169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glycerol-3-phosphate from one side of a membrane to the other. Glycerol-3-phosphate is a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glycerol-3-phosphate transmembrane transporter activity","termid":"GO:0015169"}


id: PBO:0083483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene TKL2","termid":"PBO:0083483"}


id: PBO:0077670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF14 antisense RNA 1","termid":"PBO:0077670"}


id: MONDO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient bilateral swelling of breast tissue in a neonate that results from the waning influence of maternal estrogen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gynecomastia disorder","termid":"MONDO:0001571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infant gynecomastia","secondary_identifiers":["DOID:11603","SCTID:34831003","UMLS:C1449721","MEDGEN:258541","ICD9:778.7","ICD10CM:P83.4"],"synonyms":[{"name":"breast engorgement in newborn","type":"exact"},{"name":"neonatal gynaecomastia","type":"exact"}],"termid":"MONDO:0001323","xrefs":{"Monarch":{"xref_id":"0001323"}}}


id: PBO:0029174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peptide-glutamate-N-acetyltransferase_activity","termid":"PBO:0029174"}


id: PBO:0090219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBC1A4.04 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0090219"}


id: MONDO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign nodular lesion protruding above the surface of the endometrium. It is composed of a fibrous stroma that contains thick-walled blood vessels and dilated endometrial glands. Polypectomy is the treatment of choice. Only few cases with recurrence have been reported.","definition_xrefs":["NCIT:C6433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"uterine polyp","termid":"MONDO:0004701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial polyp","secondary_identifiers":["MEDGEN:312370","EFO:1000237","UMLS:C1704273"],"synonyms":[{"name":"endometrial polyp","type":"exact"},{"name":"endometrial stromal polyp","type":"exact"},{"name":"endometrium polyp","type":"exact"},{"name":"polyp of endometrium","type":"exact"},{"name":"polyp of the endometrium","type":"exact"},{"name":"polyp, endometrial stromal, benign","type":"exact"}],"termid":"MONDO:0006195","xrefs":{"Monarch":{"xref_id":"0006195"}}}


id: GO:0090094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of metanephric cap mesenchymal cells, resulting in the expansion of the cell population. A metanephric cap mesenchymal cell is a mesenchymal cell that has condensed with other mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["PMID:19161241","GOC:yaf","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"is_a","term_name":"cell proliferation involved in metanephros development","termid":"GO:0072203"},{"relation_name":"part_of","term_name":"metanephric cap morphogenesis","termid":"GO:0072186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap mesenchymal cell proliferation involved in metanephros development","termid":"GO:0090094"}


id: PBO:0030912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vegetative_cell_phenotype","termid":"PBO:0030912"}


id: MONDO:0100388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly Monosomy 5. (A cytogenetic aneuploidy abnormality that refers to the presence of one chromosome 5 only. It is associated with the development of refractory anemia with excess blasts, refractory anemia with multilineage dysplasia, and refractory anemia with multilineage dysplasia and ringed sideroblasts.)","definition_xrefs":["NCIT:C36523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, Monosomy 5","synonyms":[{"name":"AML, Monosomy 5","type":"exact"}],"termid":"MONDO:0100388","xrefs":{"Monarch":{"xref_id":"0100388"}}}


id: MOD:00238
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-lysine residue and an L-tyrosine residue by a carbon-nitrogen bond to form 5'-(N6-L-lysine)-L-topaquinone.","definition_xrefs":["RESID:AA0233","PubMed:8688089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-(N6-L-lysine)-L-topaquinone","synonyms":[{"name":"1-[(S)-5-amino-5-carboxypentyl]amino-2-[(S)-2-amino-2-carboxyethyl]-2,6-cyclohexadien-4,5-dione","type":"exact"},{"name":"2'-(L-lys-N6-yl)-L-4',5'-topaquinone","type":"exact"},{"name":"2'-(L-lysine)-L-tyrosyl-4',5'-quinone","type":"exact"},{"name":"CROSSLNK Lysine tyrosylquinone (Lys-Tyr)","type":"exact"},{"name":"CROSSLNK Lysine tyrosylquinone (Tyr-Lys)","type":"exact"},{"name":"LTQ","type":"exact"},{"name":"lysyl oxidase cofactor","type":"exact"}],"termid":"MOD:00238"}


id: MOD:00948
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-dephospho","termid":"MOD:00948"}


id: PBO:0046156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 4","termid":"PBO:0046156"}


id: PBO:0057500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 618","termid":"PBO:0057500"}


id: PBO:0038726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 21","termid":"PBO:0038726"}


id: PBO:0016582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complememtnation, functionally complements S. cerevisiae YOR330C","termid":"PBO:0016582"}


id: GO:0030448
data:
  {"annotated_genes":["SJAG_04312","SJAG_00124"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118991,118992],"is_not":false,"summary":null,"term":"GO:0030448"}]},"cv_name":"biological_process","definition":"Growth of fungi as threadlike, tubular structures that may contain multiple nuclei and may or may not be divided internally by septa, or cross-walls.","definition_xrefs":["ISBN:0471522295","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyphal growth","references_by_uniquename":{"PMID:34427722":null},"secondary_identifiers":["GO:0075061"],"synonyms":[{"name":"formation of symbiont invasive hypha in host","type":"exact"},{"name":"formation of symbiont invasive hypha within host","type":"exact"},{"name":"formation of symbiont invasive hypha within host during symbiotic interaction","type":"exact"},{"name":"invasive hyphal growth","type":"exact"},{"name":"symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0030448","terms_by_termid":{"GO:0030448":null}}


id: GO:0021628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the olfactory nerve. This process pertains to the initial formation of a structure from unspecified parts. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"olfactory nerve morphogenesis","termid":"GO:0021627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve formation","synonyms":[{"name":"CN I biosynthesis","type":"related"},{"name":"CN I formation","type":"related"}],"termid":"GO:0021628"}


id: PBO:0065586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 2","termid":"PBO:0065586"}


id: PATO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000990 consistent (obsolete PATO:0000990)","termid":"PATO:0000990"}


id: PBO:0067423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 542, pseudogene","termid":"PBO:0067423"}


id: GO:1900038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to hypoxia.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to hypoxia","termid":"GO:1900037"},{"relation_name":"negatively_regulates","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to hypoxia","synonyms":[{"name":"down regulation of cellular response to hypoxia","type":"related"},{"name":"down regulation of cellular response to hypoxic stress","type":"exact"},{"name":"down regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"down-regulation of cellular response to hypoxia","type":"related"},{"name":"down-regulation of cellular response to hypoxic stress","type":"exact"},{"name":"down-regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"downregulation of cellular response to hypoxia","type":"related"},{"name":"downregulation of cellular response to hypoxic stress","type":"exact"},{"name":"downregulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"inhibition of cellular response to hypoxia","type":"related"},{"name":"inhibition of cellular response to hypoxic stress","type":"exact"},{"name":"inhibition of cellular response to lowered oxygen tension","type":"exact"},{"name":"negative regulation of cellular response to hypoxic stress","type":"exact"},{"name":"negative regulation of cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:1900038"}


id: PBO:0027473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mtDNA_absent_from_cell","termid":"PBO:0027473"}


id: GO:1990072
data:
  {"annotated_genes":["SJAG_02655","SJAG_01415","SJAG_00820","SJAG_03467","SJAG_04021","SJAG_04837","SJAG_00850","SJAG_02525"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73031,74865,77353,88423,97063,98864,102280,109573],"is_not":false,"summary":null,"term":"GO:1990072"}]},"cv_name":"cellular_component","definition":"A complex that functions in anterograde transport at the Golgi and also regulates autophagy. In yeast it includes at least the following subunits: Bet3 (as homodimer), Bet5, Trs20, Trs23, Trs31, Trs33, Trs85. TRAPPIII may include further, as yet undescribed, proteins.","definition_xrefs":["GOC:bhm","PMID:20375281","PMID:22669257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRAPP complex","termid":"GO:0030008"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00820":null,"SJAG_00850":null,"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_03467":null,"SJAG_04021":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005794","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"TRAPPIII protein complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990072","terms_by_termid":{"GO:1990072":null}}


id: PBO:0064803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1A","termid":"PBO:0064803"}


id: PBO:0016906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu31","termid":"PBO:0016906"}


id: MONDO:0032841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usher syndrome, type 1M","secondary_identifiers":["GARD:16370","MEDGEN:1684669","UMLS:C5231434","OMIM:618632"],"synonyms":[{"name":"USH1M","type":"related"},{"name":"USHER SYNDROME, TYPE 1M","type":"related"}],"termid":"MONDO:0032841","xrefs":{"Monarch":{"xref_id":"0032841"}}}


id: MONDO:1012227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, non-human animal","termid":"MONDO:1011977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, domestic cat","secondary_identifiers":["OMIA:000830-9685"],"termid":"MONDO:1012227","xrefs":{"Monarch":{"xref_id":"1012227"}}}


id: GO:0019306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-D-rhamnose metabolic process","termid":"GO:0046382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GDP-D-rhamnose biosynthetic process","secondary_identifiers":["MetaCyc:GDPRHAMSYN-PWY"],"synonyms":[{"name":"GDP-D-rhamnose anabolism","type":"exact"},{"name":"GDP-D-rhamnose biosynthesis","type":"exact"},{"name":"GDP-D-rhamnose formation","type":"exact"},{"name":"GDP-D-rhamnose synthesis","type":"exact"}],"termid":"GO:0019306"}


id: PBO:0001560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp101 (predicted)","termid":"PBO:0001560"}


id: GO:0051441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the meiotic cell cycle.","definition_xrefs":["PMID:10871297","GOC:dph","GOC:mah","GOC:ai","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ubiquitin-protein ligase activity involved in meiotic cell cycle (obsolete GO:0051441)","synonyms":[{"name":"APC activation during meiotic cell cycle","type":"related"},{"name":"activation of anaphase-promoting complex activity during meiotic cell cycle","type":"related"},{"name":"activation of anaphase-promoting complex activity involved in meiotic cell cycle","type":"narrow"},{"name":"activation of ubiquitin ligase activity during meiotic cell cycle","type":"narrow"},{"name":"activation of ubiquitin ligase activity of APC during meiotic cell cycle","type":"related"},{"name":"activation of ubiquitin ligase activity of anaphase promoting complex during meiotic cell cycle","type":"related"},{"name":"activation of ubiquitin ligase activity of anaphase-promoting complex during meiotic cell cycle","type":"related"},{"name":"anaphase promoting complex activation during meiotic cell cycle","type":"related"},{"name":"anaphase-promoting complex activation during meiotic cell cycle","type":"related"},{"name":"meiotic APC activation","type":"exact"},{"name":"meiotic APC activator","type":"narrow"},{"name":"meiotic SCF complex activator","type":"narrow"},{"name":"meiotic anaphase promoting complex activation","type":"related"},{"name":"meiotic anaphase promoting complex activator","type":"narrow"},{"name":"meiotic anaphase-promoting complex activator","type":"narrow"},{"name":"meiotic ubiquitin ligase activator","type":"narrow"},{"name":"positive regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"positive regulation of ubiquitin-protein ligase activity during meiotic cell cycle","type":"related"},{"name":"stimulation of ubiquitin ligase activity during meiotic cell cycle","type":"narrow"},{"name":"up regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"up-regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"upregulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"}],"termid":"GO:0051441"}


id: PBO:0071850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 45","termid":"PBO:0071850"}


id: GO:0043672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, non-sculptured part of the exine which lies below the sexine.","definition_xrefs":["PMID:5722147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nexine","termid":"GO:0043672"}


id: GO:0008777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N2-acetyl-L-ornithine + H2O = acetate + L-ornithine.","definition_xrefs":["EC:3.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0016787","GO:0019213","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetylornithine deacetylase activity","secondary_identifiers":["MetaCyc:ACETYLORNDEACET-RXN","RHEA:15941"],"synonyms":[{"name":"2-N-acetyl-L-ornithine amidohydrolase activity","type":"related"},{"name":"N-acetylornithinase activity","type":"broad"},{"name":"N2-acetyl-L-ornithine amidohydrolase activity","type":"related"},{"name":"acetylornithinase activity","type":"broad"}],"termid":"GO:0008777"}


id: PBO:0057266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 491","termid":"PBO:0057266"}


id: GO:0032016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of Ran protein signal transduction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Ran protein signal transduction (obsolete GO:0032016)","synonyms":[{"name":"down regulation of Ran protein signal transduction","type":"exact"},{"name":"down-regulation of Ran protein signal transduction","type":"exact"},{"name":"downregulation of Ran protein signal transduction","type":"exact"},{"name":"inhibition of Ran protein signal transduction","type":"narrow"}],"termid":"GO:0032016"}


id: PR:P87112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- not1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.06","synonyms":[{"name":"Spom972h-not1","type":"exact"}],"termid":"PR:P87112"}


id: PBO:0087647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose-repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; contains sequences sufficient for both complex assembly and DNA binding; respiratory defect of the null mutant is functionally complemented by human NFYA","termid":"PBO:0087647"}


id: PBO:0054375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1770","termid":"PBO:0054375"}


id: GO:0003713
data:
  {"annotated_genes":["SJAG_02927","SJAG_02458","SJAG_02849","SJAG_00909","SJAG_00584","SJAG_01403","SJAG_01193","SJAG_02401","SJAG_04820","SJAG_05341","SJAG_03622","SJAG_03107","SJAG_00613","SJAG_03668","SJAG_04274","SJAG_02066","SJAG_05153","SJAG_00087","SJAG_04613","SJAG_01778","SJAG_00342","SJAG_04099","SJAG_05203","SJAG_00904","SJAG_01157","SJAG_02196","SJAG_04205","SJAG_03981","SJAG_02541","SJAG_04705","SJAG_00641","SJAG_03599","SJAG_03590","SJAG_01658","SJAG_00164","SJAG_00184","SJAG_02671","SJAG_06638","SJAG_03776","SJAG_02494","SJAG_01952","SJAG_01113","SJAG_03945","SJAG_01728","SJAG_02773","SJAG_04647","SJAG_03573","SJAG_00297","SJAG_03752","SJAG_01711","SJAG_03924","SJAG_00269","SJAG_01475","SJAG_01771","SJAG_02391","SJAG_00156","SJAG_03441"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57798,61957,61980,71389,73325,74846,75112,75246,76844,77583,78082,78379,88256,88873,89046,90130,90444,91182,93264,93849,94104,94210,94842,95140,95621,95919,97578,98334,98433,98787,99057,101710,102613,102922,103119,103168,103369,103430,105536,105998,106132,106489,106662,106818,107085,107988,108479,108505,112042,112723,114051,114479,117312,117359,118674,118835,118836],"is_not":false,"summary":null,"term":"GO:0003713"}]},"cv_name":"molecular_function","definition":"A transcription coregulator activity that activates or increases the transcription of specific gene sets via binding to a DNA-binding transcription factor at a specific genomic locus, either on its own or as part of a complex. Coactivators often act by altering chromatin structure and modifications. For example, one class of transcription coactivators modifies chromatin structure through covalent modification of histones. A second class remodels the conformation of chromatin in an ATP-dependent fashion. A third class modulates interactions of DNA-bound DNA-binding transcription factors with other transcription coregulators. A fourth class of coactivator activity is the bridging of a DNA-binding transcription factor to the general (basal) transcription machinery. The Mediator complex, which bridges sequence-specific DNA binding transcription factors and RNA polymerase, is also a transcription coactivator.","definition_xrefs":["PMID:16858867","GOC:txnOH-2018","PMID:10213677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coregulator activity","termid":"GO:0003712"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00156":null,"SJAG_00164":null,"SJAG_00184":null,"SJAG_00269":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00584":null,"SJAG_00613":null,"SJAG_00641":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01113":null,"SJAG_01157":null,"SJAG_01193":null,"SJAG_01403":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01728":null,"SJAG_01771":null,"SJAG_01778":null,"SJAG_01952":null,"SJAG_02066":null,"SJAG_02196":null,"SJAG_02391":null,"SJAG_02401":null,"SJAG_02458":null,"SJAG_02494":null,"SJAG_02541":null,"SJAG_02671":null,"SJAG_02773":null,"SJAG_02849":null,"SJAG_02927":null,"SJAG_03107":null,"SJAG_03441":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03599":null,"SJAG_03622":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03924":null,"SJAG_03945":null,"SJAG_03981":null,"SJAG_04099":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04613":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05153":null,"SJAG_05203":null,"SJAG_05341":null,"SJAG_06638":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003712"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0140110","GO:0030674","GO:0003712"],"is_obsolete":false,"name":"transcription coactivator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001105"],"synonyms":[{"name":"RNA polymerase II transcription co-activator activity","type":"related"},{"name":"RNA polymerase II transcription coactivator activity","type":"related"},{"name":"RNA polymerase II transcription mediator activity","type":"related"},{"name":"transcription co-activator activity","type":"exact"}],"termid":"GO:0003713","terms_by_termid":{"GO:0003713":null}}


id: PBO:0044536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNMT1-associated long intergenic non-coding RNA","termid":"PBO:0044536"}


id: MONDO:0021189
data:
  {"annotated_genes":["SJAG_03703","SJAG_01665","SJAG_02431","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86317,86316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0025708"},{"annotations":[86320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030296"},{"annotations":[86111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030329"},{"annotations":[86678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013452"},{"annotations":[86312,86313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859157"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of intestinal motility.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01665":null,"SJAG_02431":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal motility disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:586448","UMLS:C0400865"],"synonyms":[{"name":"disorder of intestinal motility","type":"exact"}],"termid":"MONDO:0021189","terms_by_termid":{"MONDO:0013452":null,"MONDO:0025708":null,"MONDO:0030296":null,"MONDO:0030329":null,"MONDO:0859157":null},"xrefs":{"Monarch":{"xref_id":"0021189"}}}


id: GO:0030094
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the plasma membrane-derived thylakoid. The photosystem functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin. Examples of this complex are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem I","termid":"GO:0009522"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"plasma membrane-derived photosystem I","synonyms":[{"name":"plasma membrane photosystem I","type":"exact"}],"termid":"GO:0030094"}


id: PBO:0058724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6852","termid":"PBO:0058724"}


id: GO:1904145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation.","definition_xrefs":["GOC:TermGenie","PMID:22674394","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"is_a","term_name":"negative regulation of oocyte maturation","termid":"GO:1900194"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903538"},{"relation_name":"negatively_regulates","term_name":"meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of meiotic cell cycle process involved in oocyte maturation","synonyms":[{"name":"down regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"down-regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"downregulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"inhibition of meiotic cell cycle process involved in oocyte maturation","type":"narrow"}],"termid":"GO:1904145"}


id: GO:0008206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bile acids, a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"bile acid metabolic process","secondary_identifiers":["Reactome:R-HSA-194068"],"synonyms":[{"name":"bile acid metabolism","type":"exact"}],"termid":"GO:0008206"}


id: PBO:0082621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a heterodimeric Poc4p-Irc25p chaperone; involved in assembly of alpha subunits into the 20S proteasome; may regulate formation of proteasome isoforms with alternative subunits under different conditions; upregulates proteasome assembly in response to the unfolded protein response activated by mistargeting of proteins (UPRam)","termid":"PBO:0082621"}


id: FYPO:0004849
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119222,119221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[119214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is normal (i.e. indistinguishable from wild type). A protein metabolic process is a series of chemical reactions and pathways involving a specific protein.","definition_xrefs":["GO:0019538","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03118","SJAG_03689"],"name":"normal protein metabolic process","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal cellular protein metabolic process","type":"exact"},{"name":"normal protein metabolism","type":"exact"}],"termid":"FYPO:0004849","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PBO:0054857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2271","termid":"PBO:0054857"}


id: PBO:0054869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2283","termid":"PBO:0054869"}


id: GO:0003801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete blood coagulation factor activity (obsolete GO:0003801)","synonyms":[{"name":"blood coagulation factor activity","type":"exact"}],"termid":"GO:0003801"}


id: PBO:0078707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-2","termid":"PBO:0078707"}


id: MOD:02069
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-glutamine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-glutamine residue","termid":"MOD:02069"}


id: PBO:0059351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S15 pseudogene 2","termid":"PBO:0059351"}


id: MONDO:0010309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 42","secondary_identifiers":["UMLS:C1845810","DOID:0112057","MEDGEN:337321","MESH:C564524","GARD:22674","OMIM:300372"],"synonyms":[{"name":"MRX42","type":"exact"},{"name":"intellectual disability, X-linked 42","type":"exact"},{"name":"mental retardation, X-linked 42","type":"related"}],"termid":"MONDO:0010309","xrefs":{"Monarch":{"xref_id":"0010309"}}}


id: FYPO:0004608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle pole body is abnormal during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology during meiotic cell cycle","termid":"FYPO:0006406"},{"relation_name":"output_of","term_name":"abnormal prospore-specific spindle pole body remodeling","termid":"FYPO:0003561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000121","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abnormal spindle pole body morphology during meiosis II","synonyms":[{"name":"abnormal SPB morphology during meiosis II","type":"exact"},{"name":"abnormal spindle pole body morphology during second meiotic nuclear division","type":"exact"},{"name":"abnormal spindle pole body structure during meiosis II","type":"narrow"}],"termid":"FYPO:0004608"}


id: MONDO:0044696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome","secondary_identifiers":["MEDGEN:1798652","OMIM:617669","UMLS:C5567229","GARD:17923","Orphanet:500144"],"synonyms":[{"name":"PEBAS","type":"related"},{"name":"encephalopathy, progressive, early-onset, with brain atrophy and spasticity","type":"related"}],"termid":"MONDO:0044696","xrefs":{"Monarch":{"xref_id":"0044696"}}}


id: PBO:0084343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lanosterol 14-alpha-demethylase; catalyzes C-14 demethylation of lanosterol to form 4,4''-dimethyl cholesta-8,14,24-triene-3-beta-ol in ergosterol biosynthesis pathway; transcriptionally down-regulated when ergosterol is in excess; member of cytochrome P450 family; associated and coordinately regulated with the P450 reductase Ncp1p; human CYP51A1 functionally complements the lethality of the erg11 null mutation","termid":"PBO:0084343"}


id: MONDO:0007801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypoplasia of teeth roots (obsolete MONDO:0007801)","secondary_identifiers":["OMIM:146400","MESH:C564144"],"synonyms":[{"name":"hypoplasia of teeth roots","type":"related"}],"termid":"MONDO:0007801","xrefs":{"Monarch":{"xref_id":"0007801"}}}


id: GO:1901289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of succinyl-CoA.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0044248","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"succinyl-CoA catabolic process","synonyms":[{"name":"succinyl-CoA breakdown","type":"exact"},{"name":"succinyl-CoA catabolism","type":"exact"},{"name":"succinyl-CoA degradation","type":"exact"}],"termid":"GO:1901289"}


id: GO:0006101
data:
  {"annotated_genes":["SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62248],"is_not":false,"summary":null,"term":"GO:0006101"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving citrate, 2-hydroxy-1,2,3-propanetricarboyxlate. Citrate is widely distributed in nature and is an important intermediate in the TCA cycle and the glyoxylate cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"citrate metabolic process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"citrate metabolism","type":"exact"}],"termid":"GO:0006101","terms_by_termid":{"GO:0006101":null}}


id: MONDO:0859354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone metabolism, abnormal","termid":"MONDO:0031432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone metabolism, abnormal, 3","secondary_identifiers":["UMLS:C5774292","OMIM:620198","MEDGEN:1824065"],"termid":"MONDO:0859354","xrefs":{"Monarch":{"xref_id":"0859354"}}}


id: PBO:0058748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6872","termid":"PBO:0058748"}


id: MONDO:0002866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological conditions in the duodenum region of the small intestine (intestine, small).","definition_xrefs":["MESH:D004378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal disorder","secondary_identifiers":["DOID:4072","ICD9:537.9","MEDGEN:8502","UMLS:C0013289","SCTID:52182008","ICD9:537.89"],"synonyms":[{"name":"disease of duodenum","type":"exact"},{"name":"disease or disorder of duodenum","type":"exact"},{"name":"disorder of duodenum","type":"exact"},{"name":"duodenum disease","type":"exact"},{"name":"duodenum disease or disorder","type":"exact"},{"name":"duodenum disorder","type":"exact"}],"termid":"MONDO:0002866","xrefs":{"Monarch":{"xref_id":"0002866"}}}


id: GO:0071641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of macrophage inflammatory protein 1 alpha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of macrophage inflammatory protein 1 alpha production","termid":"GO:0071640"},{"relation_name":"negatively_regulates","term_name":"macrophage inflammatory protein-1 alpha production","termid":"GO:0071608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage inflammatory protein 1 alpha production","synonyms":[{"name":"negative regulation of CCL3 production","type":"exact"},{"name":"negative regulation of MIP-1a production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"negative regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071641"}


id: GO:0015855
data:
  {"annotated_genes":["SJAG_04717","SJAG_04714","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87852],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[88194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904082"},{"annotations":[95294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The directed movement of pyrimidine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transport","termid":"GO:0015851"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"pyrimidine nucleobase transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base transmembrane transport","type":"exact"},{"name":"pyrimidine base transport","type":"exact"},{"name":"pyrimidine transmembrane transport","type":"related"},{"name":"pyrimidine transport","type":"related"}],"termid":"GO:0015855","terms_by_termid":{"GO:0098721":null,"GO:1904082":null,"GO:1905530":null}}


id: PBO:0025427
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlysinemia","termid":"PBO:0025427"}


id: PBO:0000488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Arf binding gamma-adaptin ortholog (predicted)","termid":"PBO:0000488"}


id: GO:1905839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric D-loop disassembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15200954","GOC:BHF","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomeric loop disassembly","termid":"GO:1904534"},{"relation_name":"is_a","term_name":"regulation of telomeric D-loop disassembly","termid":"GO:1905838"},{"relation_name":"negatively_regulates","term_name":"telomeric D-loop disassembly","termid":"GO:0061820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomeric D-loop disassembly","synonyms":[{"name":"down regulation of telomeric D-loop disassembly","type":"exact"},{"name":"down-regulation of telomeric D-loop disassembly","type":"exact"},{"name":"downregulation of telomeric D-loop disassembly","type":"exact"},{"name":"inhibition of telomeric D-loop disassembly","type":"narrow"}],"termid":"GO:1905839"}


id: PBO:0070988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 12","termid":"PBO:0070988"}


id: PBO:0049117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 182","termid":"PBO:0049117"}


id: PBO:0005057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf5","termid":"PBO:0005057"}


id: SO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Site which has been experimentally altered.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_variation_site","termid":"SO:0001146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mutated_variant_site","secondary_identifiers":["BS:00036"],"synonyms":[{"name":"mutagen","type":"exact"},{"name":"mutagenesis","type":"exact"},{"name":"mutated_site","type":"exact"}],"termid":"SO:0001148"}


id: MONDO:0012674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the TLR4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 10","secondary_identifiers":["UMLS:C1969108","MESH:C566935","MEDGEN:409758","OMIM:611488","DOID:0110022"],"synonyms":[{"name":"ARMD10","type":"exact"},{"name":"TLR4 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 10","type":"exact"},{"name":"age-related macular degeneration caused by mutation in TLR4","type":"exact"},{"name":"macular Degeneration, age-related, type 10","type":"exact"},{"name":"macular degeneration, age-related, 10","type":"related"}],"termid":"MONDO:0012674","xrefs":{"Monarch":{"xref_id":"0012674"}}}


id: PBO:0048666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrokine 1","termid":"PBO:0048666"}


id: GO:0072692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Repression of transcription of DNA at the central core of a regional centromere by altering the structure of chromatin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin silencing at centromere central core (obsolete GO:0072692)","synonyms":[{"name":"centromere central core chromatin silencing","type":"exact"},{"name":"chromatin silencing at centromeric central core","type":"exact"},{"name":"chromatin silencing at chromosome kinetochore domain","type":"exact"},{"name":"heterochromatic silencing at centromere central core","type":"exact"}],"termid":"GO:0072692"}


id: GO:0017148
data:
  {"annotated_genes":["SJAG_03501","SJAG_02026","SJAG_04291","SJAG_03869","SJAG_01942","SJAG_02638","SJAG_05000","SJAG_00423","SJAG_00169","SJAG_00786","SJAG_02592","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114596,95346,117970,99202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[111901,91072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[74995,99096,109422,94127,115358,69717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[75047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"},{"annotations":[99210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141014"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"translation","termid":"GO:0006412"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00423":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_03501":null,"SJAG_03869":null,"SJAG_04291":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016478"],"synonyms":[{"name":"down regulation of protein biosynthetic process","type":"exact"},{"name":"down-regulation of protein biosynthetic process","type":"exact"},{"name":"downregulation of protein biosynthetic process","type":"exact"},{"name":"inhibition of protein biosynthetic process","type":"narrow"},{"name":"negative regulation of protein anabolism","type":"exact"},{"name":"negative regulation of protein biosynthesis","type":"exact"},{"name":"negative regulation of protein biosynthetic process","type":"exact"},{"name":"negative regulation of protein formation","type":"exact"},{"name":"negative regulation of protein synthesis","type":"exact"},{"name":"protein biosynthesis inhibitor activity","type":"related"},{"name":"protein biosynthetic process inhibitor activity","type":"related"}],"termid":"GO:0017148","terms_by_termid":{"GO:0141014":null,"GO:1904689":null,"GO:1990625":null,"GO:2000766":null,"GO:2001125":null}}


id: PBO:0077004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 6","termid":"PBO:0077004"}


id: SOFP:validation_flag
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"validation_flag","termid":"SOFP:validation_flag"}


id: GO:0044157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prolongation or process extending from a host cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell projection","termid":"GO:0044157"}


id: PBO:0074290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 5","termid":"PBO:0074290"}


id: FYPO:0004827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell dies as it goes through mitosis, usually as a result of abnormal chromosome and spindle dynamics.","definition_xrefs":["PMID:16824200","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable vegetative cell with cell death during mitosis","synonyms":[{"name":"inviable cell with cell death during mitosis during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with cell death during mitosis during mitotic cell cycle","type":"related"},{"name":"lethal; vegetative cell with cell death during mitosis","type":"exact"}],"termid":"FYPO:0004827"}


id: MONDO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 20","secondary_identifiers":["OMIM:618830","MEDGEN:1717195","UMLS:C5394226"],"synonyms":[{"name":"AUTISM, SUSCEPTIBILITY TO, 20","type":"exact"},{"name":"AUTS20","type":"exact"},{"name":"autism, susceptibility to, 20","type":"exact"}],"termid":"MONDO:0030004","xrefs":{"Monarch":{"xref_id":"0030004"}}}


id: MONDO:0045060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ductal carcinoma in situ of the breast characterized by the presence of a cribriform architectural pattern.","definition_xrefs":["NCIT:C5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ductal breast carcinoma in situ","termid":"MONDO:0005023"},{"relation_name":"is_a","term_name":"cribriform carcinoma of breast","termid":"MONDO:0045059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intraductal cribriform breast adenocarcinoma","secondary_identifiers":["UMLS:C1334248","ICDO:8201/2","MEDGEN:233570"],"synonyms":[{"name":"DCIS of breast with cribriform pattern","type":"exact"},{"name":"DCIS of the breast with cribriform pattern","type":"exact"},{"name":"cribriform DCIS of breast","type":"exact"},{"name":"cribriform DCIS of the breast","type":"exact"},{"name":"cribriform ductal breast carcinoma in situ","type":"exact"},{"name":"cribriform ductal carcinoma in situ of breast","type":"exact"},{"name":"cribriform ductal carcinoma in situ of the breast","type":"exact"},{"name":"ductal carcinoma in situ of breast with cribriform pattern","type":"exact"},{"name":"ductal carcinoma in situ of the breast with cribriform pattern","type":"exact"},{"name":"intraductal cribriform breast adenocarcinoma","type":"exact"},{"name":"non-infiltrating cribriform ductal breast carcinoma","type":"exact"},{"name":"non-invasive cribriform ductal breast carcinoma","type":"exact"}],"termid":"MONDO:0045060","xrefs":{"Monarch":{"xref_id":"0045060"}}}


id: PBO:0075839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 homolog, RNA polymerase II CTD phosphatase","termid":"PBO:0075839"}


id: GO:1900691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gliotoxin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of gliotoxin biosynthetic process","termid":"GO:1900689"},{"relation_name":"positively_regulates","term_name":"gliotoxin biosynthetic process","termid":"GO:2001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0019748"],"is_obsolete":false,"name":"positive regulation of gliotoxin biosynthetic process","synonyms":[{"name":"activation of gliotoxin anabolism","type":"exact"},{"name":"activation of gliotoxin biosynthesis","type":"exact"},{"name":"activation of gliotoxin biosynthetic process","type":"narrow"},{"name":"activation of gliotoxin formation","type":"exact"},{"name":"activation of gliotoxin synthesis","type":"exact"},{"name":"positive regulation of gliotoxin anabolism","type":"exact"},{"name":"positive regulation of gliotoxin biosynthesis","type":"exact"},{"name":"positive regulation of gliotoxin formation","type":"exact"},{"name":"positive regulation of gliotoxin synthesis","type":"exact"},{"name":"up regulation of gliotoxin anabolism","type":"exact"},{"name":"up regulation of gliotoxin biosynthesis","type":"exact"},{"name":"up regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"up regulation of gliotoxin formation","type":"exact"},{"name":"up regulation of gliotoxin synthesis","type":"exact"},{"name":"up-regulation of gliotoxin anabolism","type":"exact"},{"name":"up-regulation of gliotoxin biosynthesis","type":"exact"},{"name":"up-regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"up-regulation of gliotoxin formation","type":"exact"},{"name":"up-regulation of gliotoxin synthesis","type":"exact"},{"name":"upregulation of gliotoxin anabolism","type":"exact"},{"name":"upregulation of gliotoxin biosynthesis","type":"exact"},{"name":"upregulation of gliotoxin biosynthetic process","type":"exact"},{"name":"upregulation of gliotoxin formation","type":"exact"},{"name":"upregulation of gliotoxin synthesis","type":"exact"}],"termid":"GO:1900691"}


id: PBO:0081331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 132","termid":"PBO:0081331"}


id: PBO:0003914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR92","termid":"PBO:0003914"}


id: PBO:0046468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 2","termid":"PBO:0046468"}


id: PBO:0090801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Spo14","termid":"PBO:0090801"}


id: PBO:0041644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 S","termid":"PBO:0041644"}


id: PBO:0066158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP8 pseudogene 1","termid":"PBO:0066158"}


id: PR:Q9Y7J0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1778.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH pyrophosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.03c","synonyms":[{"name":"Spom972h-SPBC1778.03c","type":"exact"}],"termid":"PR:Q9Y7J0"}


id: GO:1990522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nematode tail spike is generated and organized. An example of this process is seen in C. elegans, where the tapered tail spike is formed during embryogenesis by a filamentous process that passes posteriorly through hyp10, the tail ventral hypodermis; the filamentous process is formed by a binucleate cell, the tail-spike cell, that subsequently undergoes programmed cell death.","definition_xrefs":["PMID:6684600","GOC:kmv","PMID:17329362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tail spike morphogenesis","secondary_identifiers":["WBbt:0008072","WBbt:0006979"],"termid":"GO:1990522"}


id: GO:0010030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increase the rate of seed germination.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed germination","termid":"GO:0010029"},{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"positively_regulates","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed germination","synonyms":[{"name":"activation of seed germination","type":"narrow"},{"name":"stimulation of seed germination","type":"narrow"},{"name":"up regulation of seed germination","type":"exact"},{"name":"up-regulation of seed germination","type":"exact"},{"name":"upregulation of seed germination","type":"exact"}],"termid":"GO:0010030"}


id: FYPO:0000698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA-7-methylguanine glycosylase activity","synonyms":[{"name":"reduced DNA-7-methylguanine glycosylase activity","type":"exact"}],"termid":"FYPO:0000698"}


id: MONDO:1010786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary generalized severe hyperkeratosis with a formation of a strongly wrinkled, thickened and scaling skin in dogs due to a variation in the SLC27A4 gene.","definition_xrefs":["PMID:26506231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, dog","termid":"MONDO:1012978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis SLC27A4-related, dog","secondary_identifiers":["OMIA:001973-9615"],"termid":"MONDO:1010786","xrefs":{"Monarch":{"xref_id":"1010786"}}}


id: GO:0141107
data:
  {"annotated_genes":["SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141106"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a methyltransferase.","definition_xrefs":["PMID:34669960","PMID:15899842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"methyltransferase regulator activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0141107","terms_by_termid":{"GO:0141106":null}}


id: GO:0160110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumens of the A and B tubules of the axonemal microtuble doublet that helps stabilize the doublet microtubule.","definition_xrefs":["PMID:37295417","GOC:krc","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}


id: GO:0032229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, GABAergic","termid":"GO:0032228"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, GABAergic","termid":"GO:0051932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, GABAergic","synonyms":[{"name":"down regulation of synaptic transmission, GABAergic","type":"exact"},{"name":"down-regulation of synaptic transmission, GABAergic","type":"exact"},{"name":"downregulation of synaptic transmission, GABAergic","type":"exact"},{"name":"inhibition of synaptic transmission, GABAergic","type":"narrow"}],"termid":"GO:0032229"}


id: GO:0009425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the three major substructures of the bacterial-type flagellum, the basal body is embedded in the cell envelope (the plasma membrane, peptidoglycan cell wall, and, if one is present, the outer membrane); it houses the secretion apparatus that exports the more distal components and the flagellar motor.","definition_xrefs":["GOC:mtg_sensu","PMID:12624192","GOC:cilia","PMID:24697492","PMID:10572114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum","termid":"GO:0009288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body","synonyms":[{"name":"flagellar basal body","type":"broad"},{"name":"flagellin-based flagellum basal body","type":"exact"}],"termid":"GO:0009425"}


id: PBO:0074662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 50B","termid":"PBO:0074662"}


id: MONDO:0007686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gray platelet syndrome (GPS) is a rare inherited bleeding disorder characterized by macrothrombocytopenia, myelofibrosis, splenomegaly and typical gray appearance of platelets on Wright stained peripheral blood smear.","definition_xrefs":["Orphanet:721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"alpha granule disease","termid":"MONDO:0020117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"gray platelet syndrome","secondary_identifiers":["icd11.foundation:1818085572","MESH:D055652","OMIM:139090","SCTID:51720005","MEDGEN:82900","GARD:2562","NCIT:C84741","DOID:0111044","UMLS:C0272302"],"synonyms":[{"name":"Alpha storage pool deficiency","type":"exact"},{"name":"BDPLT4","type":"exact"},{"name":"GPS","type":"exact"},{"name":"bleeding disorder, Platelet-type, 4","type":"related"},{"name":"gray platelet syndrome","type":"exact"},{"name":"marked decrease or absence of alpha-granules and of platelet-specific alpha-granule proteins","type":"related"},{"name":"platelet alpha-granule deficiency","type":"exact"},{"name":"platelet-type bleeding disorder 4","type":"exact"}],"termid":"MONDO:0007686","xrefs":{"Monarch":{"xref_id":"0007686"}}}


id: MONDO:0007795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mullerian duct anomalies-limb anomalies syndrome is characterized by the association of mullerian duct and distal limb anomalies. It has been described in five individuals from one family. Females presented with anomalies ranging from a vaginal septum to complete duplication of uterus and vagina, and males presented with micropenis. The limb anomalies varied from postaxial polydactyly to severe upper limb hypoplasia with split hand. The mode of transmission is autosomal dominant.","definition_xrefs":["Orphanet:2491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mullerian duct anomalies-limb anomalies syndrome","secondary_identifiers":["GARD:2908","MESH:C537155","OMIM:146160","MEDGEN:327078","UMLS:C1840335"],"synonyms":[{"name":"Müllerian duct anomalies-limb anomalies syndrome","type":"related"},{"name":"hypomelia mullerian duct anomalies","type":"related"},{"name":"hypomelia with mullerian duct anomalies","type":"related"},{"name":"limb uterus syndrome","type":"related"},{"name":"limb-uterus syndrome","type":"related"},{"name":"severe upper limb hypoplasia and Mullerian duct anomalies","type":"related"}],"termid":"MONDO:0007795","xrefs":{"Monarch":{"xref_id":"0007795"}}}


id: PBO:0046349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 7","termid":"PBO:0046349"}


id: GO:0003100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which endothelin modulates the force with which blood passes through the circulatory system. Endothelin is a hormone that is released by the endothelium, and it is a vasoconstrictor.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by endothelin","termid":"GO:0003100"}


id: PBO:0059991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 11","termid":"PBO:0059991"}


id: GO:0008511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + K+(out) + Cl-(out) = Na+(in) + K+(in) + Cl-(in).","definition_xrefs":["TC:2.A.30.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium:sodium symporter activity","termid":"GO:0009674"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"},{"relation_name":"is_a","term_name":"potassium:chloride symporter activity","termid":"GO:0015379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sodium:potassium:chloride symporter activity","secondary_identifiers":["RHEA:72395","Reactome:R-HSA-426086","Reactome:R-HSA-5623588"],"synonyms":[{"name":"sodium/potassium/chloride symporter activity","type":"exact"}],"termid":"GO:0008511"}


id: GO:1901251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lung goblet cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lung goblet cell differentiation","termid":"GO:1901249"},{"relation_name":"positively_regulates","term_name":"lung goblet cell differentiation","termid":"GO:0060480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung goblet cell differentiation","synonyms":[{"name":"activation of lung goblet cell differentiation","type":"narrow"},{"name":"activation of pulmonary goblet cell differentiation","type":"narrow"},{"name":"positive regulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"up regulation of lung goblet cell differentiation","type":"exact"},{"name":"up regulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"up-regulation of lung goblet cell differentiation","type":"exact"},{"name":"up-regulation of pulmonary goblet cell differentiation","type":"exact"},{"name":"upregulation of lung goblet cell differentiation","type":"exact"},{"name":"upregulation of pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:1901251"}


id: PBO:0080431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 15","termid":"PBO:0080431"}


id: PBO:0091528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin-related protein","termid":"PBO:0091528"}


id: PBO:0036375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr10","termid":"PBO:0036375"}


id: PBO:0028170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_pyrophosphohydrolase_activity","termid":"PBO:0028170"}


id: PBO:0062760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 5","termid":"PBO:0062760"}


id: GO:0047554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-2H-pyran-4,6-dicarboxylate + H2O = 4-carboxy-2-hydroxyhexa-2,4-dienedioate + H+.","definition_xrefs":["EC:3.1.1.57","RHEA:10644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-pyrone-4,6-dicarboxylate lactonase activity","secondary_identifiers":["KEGG_REACTION:R04277","MetaCyc:RXN-2462"],"synonyms":[{"name":"2-pyrone-4,6-dicarboxylate lactonohydrolase activity","type":"related"}],"termid":"GO:0047554"}


id: PBO:0046379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal transmembrane epsin interactor 3","termid":"PBO:0046379"}


id: PBO:0034064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_ectoparasite","termid":"PBO:0034064"}


id: GO:0043584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nose development","synonyms":[{"name":"nasus development","type":"exact"}],"termid":"GO:0043584"}


id: MONDO:0002683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choroid plexus neoplasm that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"choroid plexus cancer","termid":"MONDO:0002681"},{"relation_name":"is_a","term_name":"choroid plexus neoplasm","termid":"MONDO:0016717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult choroid plexus neoplasm","secondary_identifiers":["MEDGEN:163268","NCIT:C8568","DOID:3542","UMLS:C0796430"],"synonyms":[{"name":"adult choroid plexus cancer","type":"related"},{"name":"adult choroid plexus neoplasm","type":"exact"},{"name":"adult choroid plexus tumor","type":"exact"},{"name":"adult choroid plexus tumour","type":"exact"},{"name":"choroid plexus neoplasm","type":"broad"},{"name":"choroid plexus neoplasm of adults","type":"exact"},{"name":"neoplasm of adult choroid plexus","type":"exact"},{"name":"neoplasm of the adult choroid plexus","type":"exact"},{"name":"tumor of adult choroid plexus","type":"exact"},{"name":"tumor of the adult choroid plexus","type":"exact"},{"name":"tumour of adult choroid plexus","type":"exact"},{"name":"tumour of the adult choroid plexus","type":"exact"}],"termid":"MONDO:0002683","xrefs":{"Monarch":{"xref_id":"0002683"}}}


id: MONDO:0033258
data:
  {"annotated_genes":["SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85127],"is_not":false,"summary":null,"term":"MONDO:0033258"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 71","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617605","DOID:0080267","UMLS:C4539881","GARD:18147","MEDGEN:1621646"],"synonyms":[{"name":"DFNA71","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 71","type":"narrow"},{"name":"deafness, autosomal dominant 71","type":"narrow"}],"termid":"MONDO:0033258","terms_by_termid":{"MONDO:0033258":null},"xrefs":{"Monarch":{"xref_id":"0033258"}}}


id: GO:0047296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 putrescine = NH3 + sym-homospermidine.","definition_xrefs":["MetaCyc:2.5.1.44-RXN","EC:2.5.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"homospermidine synthase activity","secondary_identifiers":["RHEA:18645"],"synonyms":[{"name":"putrescine:putrescine 4-aminobutyltransferase (ammonia-forming)","type":"related"}],"termid":"GO:0047296"}


id: FYPO:0006466
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature non-coding RNA (ncRNA) measured in a cell is lower than normal. Total ncRNA or a specific ncRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mature ncRNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"decreased mature ncRNA accumulation","type":"related"},{"name":"decreased mature ncRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature ncRNA level during vegetative growth","type":"exact"},{"name":"decreased mature ncRNA transcript level","type":"exact"},{"name":"decreased mature non-coding RNA level","type":"exact"},{"name":"decreased ncRNA level","type":"broad"},{"name":"reduced mature ncRNA level","type":"exact"}],"termid":"FYPO:0006466","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: MONDO:1012281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tremor, non-human animal","termid":"MONDO:1011861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, pig","secondary_identifiers":["OMIA:001016-9823"],"termid":"MONDO:1012281","xrefs":{"Monarch":{"xref_id":"1012281"}}}


id: PBO:0069350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 610, pseudogene","termid":"PBO:0069350"}


id: PBO:0116632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4 pseudogene 5","termid":"PBO:0116632"}


id: PBO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calicin","termid":"PBO:0042133"}


id: GO:1903610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of calcium-dependent ATPase activity.","definition_xrefs":["GOC:TermGenie","PMID:10861851","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium-dependent ATPase activity (obsolete GO:1903610)","termid":"GO:1903610"}


id: GO:0031933
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Heterochromatic regions of the chromosome found at the telomeres.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete telomeric heterochromatin (obsolete GO:0031933)","synonyms":[{"name":"telomeric chromatin","type":"broad"}],"termid":"GO:0031933"}


id: GO:1903520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mammary gland involution.","definition_xrefs":["PMID:23164222","GO_REF:0000058","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of mammary gland involution","termid":"GO:1903519"},{"relation_name":"negatively_regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mammary gland involution","synonyms":[{"name":"down regulation of mammary gland involution","type":"exact"},{"name":"down-regulation of mammary gland involution","type":"exact"},{"name":"downregulation of mammary gland involution","type":"exact"},{"name":"inhibition of mammary gland involution","type":"narrow"}],"termid":"GO:1903520"}


id: PBO:0027482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_level_during_G0","termid":"PBO:0027482"}


id: PBO:0061227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NODAL modulator 3","termid":"PBO:0061227"}


id: FYPO:0003807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondria form branched structures.","definition_xrefs":["PMID:19373772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"net-like mitochondrial morphology","synonyms":[{"name":"branched mitochondria","type":"exact"},{"name":"branched mitochondria during vegetative growth","type":"exact"},{"name":"branched mitochondrion","type":"exact"}],"termid":"FYPO:0003807"}


id: GO:1903219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of malate dehydrogenase (decarboxylating) (NADP+) activity.","definition_xrefs":["PMID:12398416","GO_REF:0000059","GOC:sart","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of malate dehydrogenase (decarboxylating) (NADP+) activity (obsolete GO:1903219)","synonyms":[{"name":"down regulation of 'malic' enzyme","type":"related"},{"name":"down regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"down regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"down regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"down regulation of NADP-malic enzyme activity","type":"exact"},{"name":"down regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"down regulation of NADP-specific malic enzyme","type":"related"},{"name":"down regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"down regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"down regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"down-regulation of 'malic' enzyme","type":"related"},{"name":"down-regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"down-regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"down-regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"down-regulation of NADP-malic enzyme activity","type":"exact"},{"name":"down-regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"down-regulation of NADP-specific malic enzyme","type":"related"},{"name":"down-regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"down-regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"down-regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"downregulation of 'malic' enzyme","type":"related"},{"name":"downregulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"downregulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"downregulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"downregulation of NADP-malic enzyme activity","type":"exact"},{"name":"downregulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"downregulation of NADP-specific malic enzyme","type":"related"},{"name":"downregulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"downregulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"downregulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"inhibition of 'malic' enzyme","type":"related"},{"name":"inhibition of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"narrow"},{"name":"inhibition of L-malate:NADP oxidoreductase activity","type":"narrow"},{"name":"inhibition of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"inhibition of NADP-malic enzyme activity","type":"narrow"},{"name":"inhibition of NADP-specific malate dehydrogenase activity","type":"narrow"},{"name":"inhibition of NADP-specific malic enzyme","type":"related"},{"name":"inhibition of malate dehydrogenase (NADP, decarboxylating)","type":"narrow"},{"name":"inhibition of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"narrow"},{"name":"inhibition of malate dehydrogenase (decarboxylating, NADP)","type":"narrow"},{"name":"negative regulation of 'malic' enzyme","type":"related"},{"name":"negative regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"negative regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"negative regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"negative regulation of NADP-malic enzyme activity","type":"exact"},{"name":"negative regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"negative regulation of NADP-specific malic enzyme","type":"related"},{"name":"negative regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"negative regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"}],"termid":"GO:1903219"}


id: PBO:0070924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 32","termid":"PBO:0070924"}


id: PBO:0086324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to Kre9p; Kre9p is involved in cell wall beta 1,6-glucan synthesis; overproduction suppresses growth defects of a kre9 null mutant; required for propionic acid resistance","termid":"PBO:0086324"}


id: PBO:0063585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PET117 cytochrome c oxidase chaperone","termid":"PBO:0063585"}


id: GO:2000190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (obsolete GO:2000190)","synonyms":[{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor","type":"exact"}],"termid":"GO:2000190"}


id: PBO:0075377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 14","termid":"PBO:0075377"}


id: GO:1905916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GO_REF:0000058","GOC:BHF","PMID:25089138","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of phenotypic switching","termid":"GO:1900240"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"},{"relation_name":"negatively_regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation involved in phenotypic switching","synonyms":[{"name":"down regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"down-regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"downregulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"inhibition of cell differentiation involved in phenotypic switching","type":"narrow"}],"termid":"GO:1905916"}


id: MONDO:0021077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that contains a single or multiple cystic spaces. Examples include cystadenoma, mucinous cystadenocarcinoma, and serous cystadenocarcinoma.","definition_xrefs":["NCIT:C6784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic neoplasm","secondary_identifiers":["MEDGEN:232404","UMLS:C1333190"],"synonyms":[{"name":"cystic neoplasm","type":"exact"},{"name":"cystic tumor","type":"exact"},{"name":"cystic tumour","type":"exact"}],"termid":"MONDO:0021077","xrefs":{"Monarch":{"xref_id":"0021077"}}}


id: PBO:0076253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic vesicle glycoprotein 2B","termid":"PBO:0076253"}


id: GO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to RNA polymerase IV core enzyme, a multisubunit eukaryotic nuclear RNA polymerase found in plants and involved in siRNA production.","definition_xrefs":["GOC:txnOH","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"RNA polymerase IV core binding","termid":"GO:0001048"}


id: SO:0002099
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene derived from a T-cell receptor gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_pseudogene","termid":"SO:0002097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_cell_receptor_pseudogene","termid":"SO:0002099"}


id: PBO:0081829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 763","termid":"PBO:0081829"}


id: MONDO:0005466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sleep disorder characterized by excessive sleepiness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypersomnia","secondary_identifiers":["MEDGEN:214588","HP:0100786","NCIT:C78346","EFO:0005246","ICD9:780.54","UMLS:C0917799","SCTID:77692006"],"synonyms":[{"name":"hypersomnia","type":"exact"},{"name":"hypersomnia (disease)","type":"exact"}],"termid":"MONDO:0005466","xrefs":{"Monarch":{"xref_id":"0005466"}}}


id: SO:0001414
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where a insertion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_breakpoint","synonyms":[{"name":"insertion breakpoint","type":"exact"}],"termid":"SO:0001414"}


id: MOD:01673
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminohexose group through a glycosidic bond.","definition_xrefs":["Unimod:43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylhexosaminylated residue","termid":"MOD:00436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylaminohexosylated residue","synonyms":[{"name":"HexNAc","type":"related"},{"name":"HexNAcRes","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"}],"termid":"MOD:01673"}


id: GO:0043460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a long or persistent exposure to a lithium ion stimulus.","definition_xrefs":["PMID:10208444"],"gene_count":0,"genotype_count":0,"name":"obsolete response to long exposure to lithium ion (obsolete GO:0043460)","synonyms":[{"name":"response to long exposure to lithium ion","type":"exact"}],"termid":"GO:0043460"}


id: GO:2000276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oxidative phosphorylation uncoupler activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"},{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of oxidative phosphorylation uncoupler activity","synonyms":[{"name":"negative regulation of mitochondrial uncoupling protein activity","type":"related"},{"name":"negative regulation of uncoupling protein activity","type":"related"}],"termid":"GO:2000276"}


id: PBO:0064413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 6F","termid":"PBO:0064413"}


id: GO:0106191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic cations linked to oxidoreductase reactions.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inogranic cations linked to oxidoreductase reactions (obsolete GO:0106191)","termid":"GO:0106191"}


id: MONDO:0012666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 6","secondary_identifiers":["MEDGEN:409877","UMLS:C1969640","OMIM:611403"],"synonyms":[{"name":"ASRT6","type":"related"},{"name":"asthma-related traits, susceptibility to, 6","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 6","type":"exact"}],"termid":"MONDO:0012666","xrefs":{"Monarch":{"xref_id":"0012666"}}}


id: PBO:0017665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit MrpS12 (predicted)","termid":"PBO:0017665"}


id: PBO:0034610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiotic_anaphase_I","termid":"PBO:0034610"}


id: PBO:0044932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase theta","termid":"PBO:0044932"}


id: PATO:0001348
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A bacterial mating type indicating the absence of F plasmid in a bacterial cell.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial mating type","termid":"PATO:0001335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F minus mating type","synonyms":[{"name":"F-","type":"exact"}],"termid":"PATO:0001348"}


id: GO:0032232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly of actin filament bundles.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"negative regulation of actin filament bundle assembly","synonyms":[{"name":"down regulation of actin filament bundle formation","type":"exact"},{"name":"down-regulation of actin filament bundle formation","type":"exact"},{"name":"downregulation of actin filament bundle formation","type":"exact"},{"name":"inhibition of actin filament bundle formation","type":"narrow"}],"termid":"GO:0032232"}


id: PBO:0062044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 29","termid":"PBO:0062044"}


id: PBO:0053130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCT antisense RNA 1","termid":"PBO:0053130"}


id: PBO:0082202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; catalyzes sequential addition of the two terminal alpha 1,2-mannose residues to the Man5GlcNAc2-PP-dolichol intermediate during asparagine-linked glycosylation in the ER","termid":"PBO:0082202"}


id: MONDO:0003265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of psychiatric disorders which are characterized by emotional or behavioral symptoms that develop within 3 months of a stressor and do not persist for more than an additional 6 months after the stressor is no longer present.","definition_xrefs":["NCIT:C92191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adjustment disorder","secondary_identifiers":["SCTID:17226007","UMLS:C0001546","DOID:507","icd11.foundation:264310751","ICD9:309.89","MEDGEN:1338","MESH:D000275","ICD9:309.9","ICD9:309"],"synonyms":[{"name":"adaptation reaction","type":"related"},{"name":"adjustment disease","type":"exact"},{"name":"adjustment disorder","type":"exact"},{"name":"adjustment reaction","type":"exact"},{"name":"disorder, adjustment","type":"related"},{"name":"disorder, reactive","type":"related"},{"name":"disorders, adjustment","type":"related"},{"name":"disorders, reactive","type":"related"}],"termid":"MONDO:0003265","xrefs":{"Monarch":{"xref_id":"0003265"}}}


id: GO:0180051
data:
  {"annotated_genes":["SJAG_02856","SJAG_02164","SJAG_01659","SJAG_02601","SJAG_03678","SJAG_02628","SJAG_01438","SJAG_01576","SJAG_01487","SJAG_00338","SJAG_02471","SJAG_04744","SJAG_03433","SJAG_00507","SJAG_04981","SJAG_04891","SJAG_02376","SJAG_03629","SJAG_01696","SJAG_03461","SJAG_03788","SJAG_04351","SJAG_03472","SJAG_01518","SJAG_05003","SJAG_03147","SJAG_04900","SJAG_02995","SJAG_05221","SJAG_03223","SJAG_00308","SJAG_03996","SJAG_00466","SJAG_02390","SJAG_02017","SJAG_03732","SJAG_05271","SJAG_02812","SJAG_01643","SJAG_03232","SJAG_02738","SJAG_00786","SJAG_04772","SJAG_02353","SJAG_02307","SJAG_02189","SJAG_02180","SJAG_04283","SJAG_01117","SJAG_01851","SJAG_01954","SJAG_00662","SJAG_04157","SJAG_05332","SJAG_04635","SJAG_02493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68585,118226,73343,79203,57085,91754,72639,118701,77245,79800,76741,79554,79765,77134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003746"},{"annotations":[71069,74072,71724,71696,74647,80084,77478,105351,61952,72241,92539,58039,76311,77722,115362,60379,72027,74245,73686,78281,77264,61276,77280,63684,71501,72021,68297,75454,78821,105376,87289,73924,59508,74879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003743"},{"annotations":[106935,68469,65915,72200,115779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003747"},{"annotations":[98410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016150"},{"annotations":[73618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016149"},{"annotations":[108927,104466,108926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008079"}]},"cv_name":"molecular_function","definition":"A molecular function required for translation of a mRNA into a protein functioning as part of initiation, elongation or termination of translation.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00338":null,"SJAG_00466":null,"SJAG_00507":null,"SJAG_00662":null,"SJAG_00786":null,"SJAG_01117":null,"SJAG_01438":null,"SJAG_01487":null,"SJAG_01518":null,"SJAG_01576":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01696":null,"SJAG_01851":null,"SJAG_01954":null,"SJAG_02017":null,"SJAG_02164":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02307":null,"SJAG_02353":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_02493":null,"SJAG_02601":null,"SJAG_02628":null,"SJAG_02738":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03223":null,"SJAG_03232":null,"SJAG_03433":null,"SJAG_03461":null,"SJAG_03472":null,"SJAG_03629":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03788":null,"SJAG_03996":null,"SJAG_04157":null,"SJAG_04283":null,"SJAG_04351":null,"SJAG_04635":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null,"SJAG_05003":null,"SJAG_05221":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"translation factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0180051","terms_by_termid":{"GO:0003743":null,"GO:0003746":null,"GO:0003747":null,"GO:0008079":null,"GO:0016149":null,"GO:0016150":null}}


id: PBO:0042729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein H","termid":"PBO:0042729"}


id: GO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable heterodimeric complex composed of polycystin-1 and polycystin-2.","definition_xrefs":["PMID:11901144","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"polycystin complex","termid":"GO:0002133"}


id: GO:0006280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which genetic material undergoes a detectable and heritable structural change. There are three categories of mutation: genome mutations, involving addition or subtraction of one or more whole chromosomes; chromosome mutations, which alter the structure of chromosomes; and gene mutations, where the structure of a gene is altered at the molecular level.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete mutagenesis (obsolete GO:0006280)","synonyms":[{"name":"mutagenesis","type":"exact"}],"termid":"GO:0006280"}


id: GO:0089716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex consisting of Zn(2)Cys(6) containing transcription factors Pip2 and Oaf1. It binds to the oleate response element (ORE), found in the promoters of fatty acid-inducible genes in Saccharomyces where, in the presence of oleate this bound complex activates the transcription of genes encoding peroxisomal proteins.","definition_xrefs":["PMID:9288897","PMID:8972187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Pip2-Oaf1 complex","termid":"GO:0089716"}


id: PBO:0063866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary cilia formation","termid":"PBO:0063866"}


id: PBO:0043867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cereblon","termid":"PBO:0043867"}


id: MONDO:0014268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Combined immunodeficiency due to OX40 deficiency is a rare combined T and B cell immunodeficiency characterized by susceptibility to develop an aggressive, childhood-onset, disseminated, cutaneous and systemic Kaposi sarcoma.","definition_xrefs":["Orphanet:431149"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to OX40 deficiency","secondary_identifiers":["UMLS:C3810053","GARD:17710","MEDGEN:816383","DOID:0111935","OMIM:615593","SCTID:766879006"],"synonyms":[{"name":"IMD16","type":"related"},{"name":"OX40 deficiency","type":"related"},{"name":"combined immunodeficiency with childhood-onset Kaposi sarcoma","type":"exact"},{"name":"combined immunodeficiency with impaired immunity to HHV-8","type":"exact"},{"name":"combined immunodeficiency with impaired immunity to human herpes virus 8","type":"exact"},{"name":"immunodeficiency 16","type":"related"},{"name":"immunodeficiency type 16","type":"exact"}],"termid":"MONDO:0014268","xrefs":{"Monarch":{"xref_id":"0014268"}}}


id: GO:0099401
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a caveola that extends into the cytoplasm, excluding the neck (rim). This region is associated with intracellular caveola proteins.","definition_xrefs":["GOC:PARL","GOC:POD","PMID:17227843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane microdomain","termid":"GO:0098857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"caveola bulb","synonyms":[{"name":"caveola crater","type":"exact"}],"termid":"GO:0099401"}


id: MONDO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal neoplasm that arises from the breast. Representative examples include angiosarcoma, liposarcoma, leiomyosarcoma, rhabdomyosarcoma, and extraskeletal osteosarcoma.","definition_xrefs":["NCIT:C4670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast cancer","termid":"MONDO:0007254"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast sarcoma","secondary_identifiers":["ONCOTREE:PBS","UMLS:C0349667","MEDGEN:87613","DOID:3017","SCTID:278050001"],"synonyms":[{"name":"PBS","type":"related"},{"name":"breast sarcoma","type":"exact"},{"name":"sarcoma of breast","type":"exact"},{"name":"sarcoma of the breast","type":"exact"}],"termid":"MONDO:0002490","xrefs":{"Monarch":{"xref_id":"0002490"}}}


id: MONDO:0015517
data:
  {"annotated_genes":["SJAG_02330","SJAG_02208"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85870,85871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958013"}]},"cv_name":"mondo","definition":"Common variable immunodeficiency (CVID) comprises a heterogeneous group of diseases characterized by a significant hypogammaglobulinemia of unknown cause, failure to produce specific antibodies after immunizations and susceptibility to bacterial infections, predominantly caused by encapsulated bacteria.","definition_xrefs":["Orphanet:1572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"syndromic agammaglobulinemia","termid":"MONDO:0016463"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02208":null,"SJAG_02330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"common variable immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:23238000","MEDGEN:40407","NANDO:2200717","ICD9:279.06","NORD:990","UMLS:C0009447","MESH:D017074","GARD:6140","OMIMPS:607594","DOID:12177","MedDRA:10021449","NANDO:1200344","icd11.foundation:1908371517","NCIT:C26725"],"synonyms":[{"name":"CVID","type":"exact"},{"name":"Common Variable Immune Deficiency","type":"exact"},{"name":"Immunoglobulin deficiency, late-onset","type":"related"},{"name":"acquired agammaglobulinemia","type":"related"},{"name":"acquired hypogammaglobulinemia","type":"related"},{"name":"common variable agammaglobulinemia","type":"exact"},{"name":"common variable hypogamma-globulinemia","type":"related"},{"name":"common variable immune deficiency","type":"related"},{"name":"hypogamma-globulinemia, acquired","type":"related"},{"name":"idiopathic immunoglobulin deficiency","type":"exact"},{"name":"primary antibody deficiency","type":"exact"},{"name":"primary hypogammaglobulinemia","type":"exact"},{"name":"secondary hypogammaglobulinemia","type":"exact"},{"name":"sporadic hypogammaglobulinemia","type":"exact"}],"termid":"MONDO:0015517","terms_by_termid":{"MONDO:0958013":null},"xrefs":{"Monarch":{"xref_id":"0015517"}}}


id: PBO:0057383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ay","termid":"PBO:0057383"}


id: GO:0015841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amines into, out of or within chromaffin granules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transport","termid":"GO:0015837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"chromaffin granule amine transport","termid":"GO:0015841"}


id: SO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base of the final codon of an incompletely annotated transcript is changed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminator_codon_variant","termid":"SO:0001590"},{"relation_name":"is_a","term_name":"inframe_variant","termid":"SO:0001650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_terminal_codon_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:incomplete_terminal_codon_variant","type":"exact"},{"name":"incomplete terminal codon variant","type":"exact"},{"name":"partial_codon","type":"exact"}],"termid":"SO:0001626"}


id: PBO:0090373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated intermembrane lipid transfer protein Atg2","termid":"PBO:0090373"}


id: GO:0007057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle during meiosis I of a meiotic cell cycle in females. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in female meiosis","termid":"GO:0007056"},{"relation_name":"part_of","term_name":"female meiosis I","termid":"GO:0007144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0044085","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"spindle assembly involved in female meiosis I","synonyms":[{"name":"female meiosis I spindle assembly","type":"related"}],"termid":"GO:0007057"}


id: GO:0015420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: vitamin B12(out) + ATP + H2O = ADP + an vitamin B12(in) + H+ + phosphate. Vitamin B12 is alkylcob(III)alamin.","definition_xrefs":["GOC:pz","RHEA:17873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type vitamin B12 transporter activity","secondary_identifiers":["EC:7.6.2.8","GO:0015235","GO:0102023","Reactome:R-HSA-3095901","Reactome:R-HSA-5223313","Reactome:R-HSA-5683325","Reactome:R-HSA-9759206","MetaCyc:3.6.3.33-RXN"],"synonyms":[{"name":"ATP-dependent cobalamin transmembrane transporter activity","type":"related"},{"name":"ATP-dependent vitamin B12 transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled cobalamin transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled vitamin B12 transmembrane transporter activity","type":"related"},{"name":"cobalamin ABC transporter","type":"exact"},{"name":"cobalamin porter activity","type":"broad"},{"name":"cobalamin transporter activity","type":"broad"},{"name":"cobalamin-transporting ATPase activity","type":"related"},{"name":"vitamin B12 ABC transporter activity","type":"exact"},{"name":"vitamin B12 porter activity","type":"broad"},{"name":"vitamin B12 transporter activity","type":"broad"},{"name":"vitamin B12-transporting ATPase activity","type":"broad"}],"termid":"GO:0015420"}


id: FYPO:0007799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the cell surface is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to cell surface during vegetative growth","synonyms":[{"name":"ectopic protein localization to cell surface during vegetative growth","type":"exact"},{"name":"protein mislocalised to cell surface during vegetative growth","type":"exact"},{"name":"protein mislocalized to cell surface during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007799"}


id: GO:0048200
data:
  {"annotated_genes":["SJAG_03268","SJAG_04391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71084,117485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048205"}]},"cv_name":"biological_process","definition":"The addition of specific coat proteins to Golgi membranes during the formation of transport vesicles.","definition_xrefs":["PMID:10219233","GOC:jid","ISBN:0716731363","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle coating","termid":"GO:0006901"},{"relation_name":"part_of","term_name":"Golgi vesicle budding","termid":"GO:0048194"},{"relation_name":"part_of","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"Golgi transport vesicle coating","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dictyosome transport vesicle coating","type":"narrow"}],"termid":"GO:0048200","terms_by_termid":{"GO:0048205":null}}


id: PR:O14249
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ABHD4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01344","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin-specific deacylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.03c","secondary_identifiers":["UniProtKB:O14249"],"synonyms":[{"name":"Spom972h-ABHD4","type":"exact"}],"termid":"PR:O14249"}


id: FYPO:0004192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to ionizing radiation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to ionizing radiation","synonyms":[{"name":"decreased RNA accumulation during cellular response to ionizing radiation","type":"related"},{"name":"decreased RNA level during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to ionizing radiation","type":"exact"},{"name":"reduced RNA level during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004192"}


id: PBO:0059330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S5 pseudogene 4","termid":"PBO:0059330"}


id: PBO:0005401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase Hem12 (predicted)","termid":"PBO:0005401"}


id: MONDO:0957530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast-ovarian cancer, familial, susceptibility to","termid":"MONDO:0100526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast-ovarian cancer, familial, susceptibility to, 5","secondary_identifiers":["MEDGEN:1841251","OMIM:620442","UMLS:C5830615"],"termid":"MONDO:0957530","xrefs":{"Monarch":{"xref_id":"0957530"}}}


id: PBO:0071212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 53","termid":"PBO:0071212"}


id: MONDO:0004777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute inflammatory process affecting the larynx. It is caused by bacteria, viruses, or vocal strain. Signs and symptoms include sore throat, cough, swallowing difficulties, and hoarseness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngitis","termid":"MONDO:0002647"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute laryngitis","secondary_identifiers":["ICD9:464.01","MEDGEN:1317","DOID:9396","ICD9:464.0","UMLS:C0001327","ICD10CM:J04.0","icd11.foundation:1180710837","SCTID:6655004","NCIT:C26688","ICD9:464.00"],"synonyms":[{"name":"laryngitis","type":"broad"},{"name":"laryngitis, acute","type":"exact"}],"termid":"MONDO:0004777","xrefs":{"Monarch":{"xref_id":"0004777"}}}


id: MOD:00182
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to L-bromohistidine.","definition_xrefs":["PubMed:2076468","PubMed:9033387","RESID:AA0173","Unimod:340#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated histidine","termid":"MOD:01049"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-bromohistidine","synonyms":[{"name":"Br1His","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-bromohistidine","type":"exact"},{"name":"MOD_RES Bromohistidine","type":"exact"},{"name":"bromination","type":"related"}],"termid":"MOD:00182"}


id: MONDO:0022518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by rapidly progressive sensorineural hearing loss (SNHL), that is often bilateral, and is potentially reversible.","definition_xrefs":["PMID:26485595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease of ear, nose and throat","termid":"MONDO:0000587"},{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune inner ear disease","secondary_identifiers":["icd11.foundation:1392879169","UMLS:C0395947","MEDGEN:583162"],"synonyms":[{"name":"AIED","type":"related"}],"termid":"MONDO:0022518","xrefs":{"Monarch":{"xref_id":"0022518"}}}


id: PBO:0030323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_oleoyl-CoA_ligase_activity","termid":"PBO:0030323"}


id: FYPO:0002861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide uridylyltransferase (poly(U) polymerase) activity is decreased.","definition_xrefs":["PomBase:mah","PMID:17449726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal poly(U) polymerase activity","termid":"FYPO:0002860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased poly(U) polymerase activity","synonyms":[{"name":"decreased RNA uridylyltransferase activity","type":"exact"},{"name":"decreased polynucleotide uridylyltransferase activity","type":"exact"},{"name":"reduced poly(U) polymerase activity","type":"exact"}],"termid":"FYPO:0002861"}


id: MONDO:0011952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 7","secondary_identifiers":["OMIM:608031","UMLS:C1842674","MEDGEN:334136","DOID:0060199","GARD:10500","MESH:C564300"],"synonyms":[{"name":"ALS7","type":"exact"},{"name":"amyotrophic lateral sclerosis 7","type":"exact"}],"termid":"MONDO:0011952","xrefs":{"Monarch":{"xref_id":"0011952"}}}


id: MONDO:0024282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive malignant neoplasm that arises from the ovary and is characterized by the presence of malignant epithelial cells that contain intracytoplasmic mucin and may resemble the epithelial cells of the endocervix or gastrointestinal tract. It includes mucinous adenocarcinoma and mucinous adenocarcinofibroma.","definition_xrefs":["NCIT:C40033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian mucinous neoplasm","termid":"MONDO:0003756"},{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mucinous ovarian cancer","secondary_identifiers":["MEDGEN:274767","ONCOTREE:MOV","UMLS:C1518233"],"synonyms":[{"name":"malignant ovarian mucinous neoplasm","type":"exact"},{"name":"malignant ovarian mucinous tumor","type":"exact"},{"name":"malignant ovarian mucinous tumour","type":"exact"},{"name":"ovarian mucinous neoplasm, malignant","type":"exact"}],"termid":"MONDO:0024282","xrefs":{"Monarch":{"xref_id":"0024282"}}}


id: PBO:0085653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrial fission and peroxisome abundance; may have a distinct role in tethering protein aggregates to mitochondria in order to retain them in the mother cell; required for localization of Dnm1p and Mdv1p during mitochondrial division; mediates ethanol-induced apoptosis and ethanol-induced mitochondrial fragmentation","termid":"PBO:0085653"}


id: SO:0001341
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"4_demethylwyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four_demethylwyosine","secondary_identifiers":["RNAMOD:100"],"synonyms":[{"name":"4-demethylwyosine","type":"exact"},{"name":"four demethylwyosine","type":"exact"},{"name":"imG-14","type":"exact"}],"termid":"SO:0001341"}


id: PR:P32747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydroorotate dehydrogenase (quinone), mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00561","PRO:DNx","PANTHER:PTHR11938:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone), mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.12c","secondary_identifiers":["UniProtKB:P32747"],"synonyms":[{"name":"DHOD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHODase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHOdehase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DHODH","type":"exact"},{"name":"dihydroorotate oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32747"}


id: PBO:0056952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR-17-92a-1 cluster host gene","termid":"PBO:0056952"}


id: GO:0048237
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the rough endoplasmic reticulum.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum","termid":"GO:0005791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"rough endoplasmic reticulum lumen","secondary_identifiers":["NIF_Subcellular:sao1819509473"],"synonyms":[{"name":"RER lumen","type":"exact"},{"name":"rough ER lumen","type":"exact"}],"termid":"GO:0048237"}


id: GO:0035813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of excretion","termid":"GO:0044062"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of renal sodium excretion","termid":"GO:0035813"}


id: GO:0043464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic enzymatic conversion of L-malate to L-lactate and carbon dioxide, yielding energy in the form of ATP.","definition_xrefs":["PMID:10427020","PMID:8808948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"malolactic fermentation","secondary_identifiers":["Wikipedia:Malolactic_fermentation"],"synonyms":[{"name":"L-malate fermentation","type":"broad"},{"name":"malate fermentation","type":"broad"},{"name":"malo-lactate fermentation","type":"exact"},{"name":"malolactate fermentation","type":"exact"}],"termid":"GO:0043464"}


id: PBO:0088923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ubiquitin-protein ligase E3, MARCH family","termid":"PBO:0088923"}


id: SO:0000070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene and on the opposite strand.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inside_intron","termid":"SO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron_antiparallel","synonyms":[{"name":"inside intron antiparallel","type":"exact"}],"termid":"SO:0000070"}


id: PBO:0005021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threo-3-hydroxyaspartate ammonia-lyase (predicted)","termid":"PBO:0005021"}


id: PBO:0058144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4440","termid":"PBO:0058144"}


id: PBO:0075481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily C member 1","termid":"PBO:0075481"}


id: GO:0003032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an oxygen stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to oxygen levels","termid":"GO:0070482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oxygen","termid":"GO:0003032"}


id: PBO:0001194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA polymerase specificity factor Mtf1","termid":"PBO:0001194"}


id: FYPO:0005605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Ssb1 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Ssb1 foci","type":"related"},{"name":"increased duration of RPA focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad11 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rpa1 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Ssb1 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Ssb1 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005605"}


id: SO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double-helical region of nucleic acid formed by base-pairing between adjacent (inverted) complementary sequences.","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_sequence_secondary_structure","termid":"SO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_loop","secondary_identifiers":["http://en.wikipedia.org/wiki/Stem_loop","SO:0000019"],"synonyms":[{"name":"INSDC_feature:stem_loop","type":"exact"},{"name":"RNA_hairpin_loop","type":"exact"},{"name":"stem loop","type":"exact"},{"name":"stem-loop","type":"exact"}],"termid":"SO:0000313"}


id: MONDO:0013251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Birbeck granule deficiency","secondary_identifiers":["OMIM:613393","MEDGEN:462007","UMLS:C3150657"],"synonyms":[{"name":"Birbeck granule deficiency","type":"exact"},{"name":"Birbeck granules, absence of","type":"related"}],"termid":"MONDO:0013251","xrefs":{"Monarch":{"xref_id":"0013251"}}}


id: MONDO:0014204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 5","secondary_identifiers":["UMLS:C3809645","OMIM:615483","MEDGEN:815975","GARD:15973"],"synonyms":[{"name":"IBGC5","type":"related"},{"name":"basal ganglia calcification, idiopathic, 5","type":"exact"},{"name":"basal ganglia calcification, idiopathic, type 5","type":"exact"}],"termid":"MONDO:0014204","xrefs":{"Monarch":{"xref_id":"0014204"}}}


id: PBO:0108599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-negatively_regulates_characteristic","termid":"PBO:0108599"}


id: PBO:0079222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 1","termid":"PBO:0079222"}


id: GO:0070360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of an organism, usually a bacterial cell, from one place to another within its host organism, by a process involving continuous polymerization of actin at one pole of the symbiont cell. Some bacteria use host actin for migration from cell to cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:15981456","PMID:35285700","GOC:mah","GOC:jl","PMID:26021574","PMID:15773977","PMID:27997855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization-dependent cell motility","termid":"GO:0070358"},{"relation_name":"is_a","term_name":"symbiont-mediated cell-to-cell migration in host","termid":"GO:0106259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated actin polymerization-dependent cell-to-cell migration in host","secondary_identifiers":["GO:0070359"],"synonyms":[{"name":"actin polymerization-dependent cell migration in host","type":"broad"},{"name":"actin polymerization-dependent cell motility involved in migration of symbiont in host","type":"related"},{"name":"actin polymerization-dependent cell-to-cell migration in host","type":"exact"},{"name":"migration of symbiont within host by polymerization of host actin","type":"related"}],"termid":"GO:0070360"}


id: PBO:0089090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit Rqc1","termid":"PBO:0089090"}


id: GO:0102661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-nonaprenyl diphosphate + homogentisate + H+ = 2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinone + carbon dioxide + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete homogentisate solanyltransferase activity (obsolete GO:0102661)","termid":"GO:0102661"}


id: GO:0061684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The autophagy process which begins when chaperones and co-chaperones recognize a target motif and unfold the substrate protein. The proteins are then transported to the lysosome where they are degraded.","definition_xrefs":["GOC:pad","PMID:23434281","GOC:PARL","PMID:22743996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"},{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"chaperone-mediated autophagy","secondary_identifiers":["Reactome:R-HSA-9613829","Wikipedia:Chaperone-mediated_autophagy"],"synonyms":[{"name":"CASA","type":"broad"},{"name":"CMA","type":"broad"},{"name":"chaperone-assisted selective autophagy","type":"exact"}],"termid":"GO:0061684"}


id: PR:Q9P6P5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01135","PRO:DNx","PANTHER:PTHR13048:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit bet3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.18c","secondary_identifiers":["UniProtKB:Q9P6P5"],"synonyms":[{"name":"Spom972h-TRAPPC3","type":"exact"},{"name":"TRAPP subunit bet3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P5"}


id: GO:0043305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of mast cell degranulation","termid":"GO:0043304"},{"relation_name":"negatively_regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of mast cell degranulation","synonyms":[{"name":"down regulation of mast cell degranulation","type":"exact"},{"name":"down-regulation of mast cell degranulation","type":"exact"},{"name":"downregulation of mast cell degranulation","type":"exact"},{"name":"inhibition of mast cell degranulation","type":"narrow"},{"name":"negative regulation of mast cell granule exocytosis","type":"exact"}],"termid":"GO:0043305"}


id: PBO:0086995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reticulon protein; involved in nuclear pore assembly and maintenance of tubular ER morphology; promotes membrane curvature; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; interacts with Sec6p, Yip3p, and Sbh1p; less abundant than RTN1; member of RTNLA (reticulon-like A) subfamily; protein increases in abundance and relocalizes to plasma membrane upon DNA replication stress","termid":"PBO:0086995"}


id: GO:0034515
data:
  {"annotated_genes":["SJAG_04088","SJAG_02900","SJAG_03638"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72885,79620,96156],"is_not":false,"summary":null,"term":"GO:0034515"}]},"cv_name":"cellular_component","definition":"An aggregation of proteasome core protease (CP) and regulatory particle (RP) complexes that localizes in the cytoplasm as dot-like structures when cells are in a quiescent state.","definition_xrefs":["GOC:rb","PMID:18504300","PMID:30204036","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02900":null,"SJAG_03638":null,"SJAG_04088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"proteasome storage granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PSG","type":"related"}],"termid":"GO:0034515","terms_by_termid":{"GO:0034515":null}}


id: GO:0050506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + vomilenine = H+ + raucaffricine + UDP.","definition_xrefs":["EC:2.4.1.219","RHEA:19385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"vomilenine glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05882","MetaCyc:2.4.1.219-RXN"],"synonyms":[{"name":"UDP-glucose:vomilenine 21-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21beta-D-glucosyltransferase activity","type":"related"},{"name":"vomilenine-glucosyltransferase activity","type":"related"}],"termid":"GO:0050506"}


id: GO:0009262
data:
  {"annotated_genes":["SJAG_04657","SJAG_02948","SJAG_02874","SJAG_01348","SJAG_04665","SJAG_04487","SJAG_03771","SJAG_00885","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96838],"is_not":false,"summary":null,"term":"GO:0009262"},{"annotations":[71649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[95244,107013,92201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[98748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[70637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[69705,79135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[68266,70638,92202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[70636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[79243,69704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[79241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_01348":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0009393","GO:0009122"],"synonyms":[{"name":"deoxyribonucleotide metabolism","type":"exact"}],"termid":"GO:0009262","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009262":null,"GO:0009265":null,"GO:0035863":null,"GO:0046081":null}}


id: PBO:0090629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho4","termid":"PBO:0090629"}


id: FYPO:0004060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which endocytosis does not occur during meiotic interphase II, i.e. the phase between the end of meiosis I cytokinesis the beginning of meiosis II prophase. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["GO:0044844","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished endocytosis during meiotic interphase II","synonyms":[{"name":"abolished actin-mediated endocytosis during meiotic interphase II","type":"exact"},{"name":"abolished protein internalization during meiotic interphase II","type":"narrow"},{"name":"absent endocytosis during meiotic interphase II","type":"exact"},{"name":"endocytosis abolished during meiotic interphase II","type":"exact"}],"termid":"FYPO:0004060"}


id: MONDO:0003609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign cystadenoma that arises from the seminal vesicle.","definition_xrefs":["NCIT:C39907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"seminal vesicle tumor","termid":"MONDO:0002790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seminal vesicle cystadenoma","secondary_identifiers":["MEDGEN:274209","DOID:5724","UMLS:C1519234"],"synonyms":[{"name":"seminal vesicle cystadenoma","type":"exact"}],"termid":"MONDO:0003609","xrefs":{"Monarch":{"xref_id":"0003609"}}}


id: MONDO:0007115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"angioma serpiginosum","termid":"MONDO:0019803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioma serpiginosum, autosomal dominant","secondary_identifiers":["UMLS:C1970130","GARD:10189","MEDGEN:370186","OMIM:106050","MESH:C536365"],"synonyms":[{"name":"angioma serpiginosum, autosomal dominant","type":"exact"},{"name":"autosomal dominant angioma serpiginosum","type":"related"}],"termid":"MONDO:0007115","xrefs":{"Monarch":{"xref_id":"0007115"}}}


id: MONDO:0009249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary fructose intolerance (HFI) is an autosomal recessive disorder of fructose metabolism, resulting from a deficiency of hepatic fructose-1-phosphate aldolase activity and leading to gastrointestinal disorders and postprandial hypoglycemia following fructose ingestion. HFI is a benign condition when treated, but it is life-threatening and potentially fatal if left untreated.","definition_xrefs":["Orphanet:469"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete congenital intestinal transport defect (obsolete MONDO:0015178)","termid":"MONDO:0015178"},{"relation_name":"excluded_subClassOf","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"disorder of fructose metabolism","termid":"MONDO:0017689"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"hereditary fructose intolerance","secondary_identifiers":["ICD10CM:E74.12","MEDGEN:42105","ICD9:271.2","OMIM:229600","SCTID:20052008","DOID:9869","NANDO:2200531","UMLS:C0016751","GARD:6622","NCIT:C84720","icd11.foundation:1925240365","NORD:1166","MedDRA:10019878"],"synonyms":[{"name":"Aldob deficiency","type":"related"},{"name":"Fructosaemia","type":"exact"},{"name":"Fructose Intolerance, Hereditary","type":"exact"},{"name":"aldolase B deficiency","type":"related"},{"name":"fructose intolerance","type":"exact"},{"name":"fructose intolerance, hereditary","type":"exact"},{"name":"fructose-1,6-bisphosphate aldolase B deficiency","type":"exact"},{"name":"fructose-1-phosphate aldolase deficiency","type":"related"},{"name":"fructosemia","type":"exact"},{"name":"hereditary fructose intolerance","type":"exact"},{"name":"hereditary fructose intolerance syndrome","type":"exact"},{"name":"hereditary fructose-1-phosphate aldolase deficiency","type":"exact"},{"name":"hereditary fructosemia","type":"exact"}],"termid":"MONDO:0009249","xrefs":{"Monarch":{"xref_id":"0009249"}}}


id: MONDO:0006086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign soft tissue neoplasm characterized by the presence of neoplastic spindle and stellate cells, and vascular proliferation in a myxoid stroma.","definition_xrefs":["NCIT:C3254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"},{"relation_name":"is_a","term_name":"benign soft tissue neoplasm","termid":"MONDO:0044335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomyxoma","secondary_identifiers":["SCTID:404083008","UMLS:C5551004","EFO:1000087","ICD9:215.9","MEDGEN:1790210","ICDO:8841/0","ICDO:8841/1"],"termid":"MONDO:0006086","xrefs":{"Monarch":{"xref_id":"0006086"}}}


id: GO:1990798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a destroyed pancreas.","definition_xrefs":["PMID:1985964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ regeneration","termid":"GO:0031100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas regeneration","termid":"GO:1990798"}


id: PBO:0042374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 receptor 1 like","termid":"PBO:0042374"}


id: MONDO:0700145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant lymphoproliferative disorder that affects dogs. It is characterized by the clonal proliferation of B- or T-lymphocytes in the lymph nodes, bone marrow, and/or extranodal sites.","definition_xrefs":["NCIT:C128121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine lymphoma","secondary_identifiers":["OMIA:001733-9615"],"termid":"MONDO:0700145","xrefs":{"Monarch":{"xref_id":"0700145"}}}


id: PBO:0088935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine 5'-monophosphoramidase","termid":"PBO:0088935"}


id: GO:0033618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase) in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex IV assembly","termid":"GO:0008535"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"plasma membrane respiratory chain complex IV assembly","synonyms":[{"name":"plasma membrane cytochrome c oxidase biogenesis","type":"broad"},{"name":"plasma membrane cytochrome c oxidase complex assembly","type":"exact"}],"termid":"GO:0033618"}


id: PBO:0048277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 13","termid":"PBO:0048277"}


id: PBO:0059223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 5 (gene/pseudogene)","termid":"PBO:0059223"}


id: PBO:0080539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASL divergent transcript","termid":"PBO:0080539"}


id: PBO:0062013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 2","termid":"PBO:0062013"}


id: MONDO:0013869
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85925],"is_not":false,"summary":null,"term":"MONDO:0013869"}]},"cv_name":"mondo","definition":"Adenine phosphoribosyltransferase (APRT) deficiency is a rare autosomal recessive (AR) disorder characterized by the formation and hyperexcretion of 2,8-dihydroxyadenine (2,8-DHA) in urine, causing urolithiasis and crystalline nephropathy.","definition_xrefs":["Orphanet:976"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254","MONDO:0004736"],"is_obsolete":false,"name":"adenine phosphoribosyltransferase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:546","icd11.foundation:753682703","NANDO:2200587","OMIM:614723","MESH:C538228","SCTID:124274002","DOID:0060350","UMLS:C0268120","MEDGEN:82772","NCIT:C121564"],"synonyms":[{"name":"2,8-dihydroxyadenine urolithiasis","type":"exact"},{"name":"2,8-dihydroxyadeninuria disease","type":"exact"},{"name":"APRT deficiency","type":"exact"},{"name":"APRTD","type":"related"},{"name":"Dihydroxyadeninuria","type":"related"},{"name":"adenine phosphoribosyltransferase deficiency","type":"exact"},{"name":"nephrolithiasis, Dha","type":"related"},{"name":"urolithiasis, 2,8-dihydroxyadenine","type":"related"},{"name":"urolithiasis, Dha","type":"related"}],"termid":"MONDO:0013869","terms_by_termid":{"MONDO:0013869":null},"xrefs":{"Monarch":{"xref_id":"0013869"}}}


id: PBO:0051528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 2","termid":"PBO:0051528"}


id: GO:0120235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of posttranslational protein translocation through the ER membrane.","definition_xrefs":["GOC:krc","PMID:32513868","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"post-translational protein targeting to membrane, translocation","termid":"GO:0031204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of post-translational protein targeting to membrane, translocation","synonyms":[{"name":"regulation of N-terminal signal peptide-independent translocation into the ER","type":"narrow"},{"name":"regulation of SRP-independent endoplasmic reticulum protein-membrane targeting, translocation","type":"narrow"},{"name":"regulation of posttranslational endoplasmic reticulum membrane protein translocation","type":"exact"},{"name":"regulation of posttranslational protein targeting to membrane, translocation","type":"exact"}],"termid":"GO:0120235"}


id: PBO:0066050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap1 GTPase-GDP dissociation stimulator 1","termid":"PBO:0066050"}


id: FYPO:0002302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spheroid, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, spheroid cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, rounded cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, spheroid cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, spheroid cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, spheroid cell","type":"exact"}],"termid":"FYPO:0002302"}


id: PBO:0069705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 985, pseudogene","termid":"PBO:0069705"}


id: MONDO:0013862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"immunodeficiency, common variable, 7","secondary_identifiers":["UMLS:C3542922","OMIM:614699","GARD:15836","MEDGEN:762276","DOID:0081150","NANDO:2200801"],"synonyms":[{"name":"CVID7","type":"related"},{"name":"immunodeficiency, common variable, 7","type":"exact"},{"name":"immunodeficiency, common variable, type 7","type":"exact"}],"termid":"MONDO:0013862","xrefs":{"Monarch":{"xref_id":"0013862"}}}


id: MONDO:0010437
data:
  {"annotated_genes":["SJAG_02016"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86681],"is_not":false,"summary":null,"term":"MONDO:0010437"}]},"cv_name":"mondo","definition":"Severe X-linked mitochondrial encephalomyopathy is an extremely rare mitochondrial respiratory chain disease resulting in a neurodegenerative disorder characterized by psychomotor delay, hypotonia, areflexia, muscle weakness and wasting in the two patients reported to date.","definition_xrefs":["Orphanet:238329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"severe X-linked mitochondrial encephalomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300816","SCTID:722212004","DOID:0111502","MEDGEN:463103","UMLS:C3151753","GARD:17171"],"synonyms":[{"name":"COXPD6","type":"related"},{"name":"combined oxidative phosphorylation deficiency 6","type":"related"},{"name":"combined oxidative phosphorylation deficiency 6, X-linked recessive","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 6","type":"exact"},{"name":"encephalomyopathy, mitochondrial, X-linked","type":"related"},{"name":"mitochondrial encephalomyopathy due to COXPD6","type":"exact"},{"name":"mitochondrial encephalomyopathy due to combined oxidative phosphorylation defect 6","type":"exact"}],"termid":"MONDO:0010437","terms_by_termid":{"MONDO:0010437":null},"xrefs":{"Monarch":{"xref_id":"0010437"}}}


id: MONDO:0859185
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85985],"is_not":false,"summary":null,"term":"MONDO:0859185"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and dysmorphic facies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794184","OMIM:619503","UMLS:C5561974"],"termid":"MONDO:0859185","terms_by_termid":{"MONDO:0859185":null},"xrefs":{"Monarch":{"xref_id":"0859185"}}}


id: GO:0070765
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has aspartic-type endopeptidase activity and contains a presenilin catalytic subunit (either PSEN1 or PSEN2), an APH1 subunit (multiple genes and splice variants exist), nicastrin (NCT), and presenilin enhancer (aka PEN-2 or Psenen), as the core complex. Variants of the complex with different subunit compositions differ in localization and specific substrates. Additionally, variants of the complex exist that contain a additional regulatory subunit as well as the four core subunits; known regulatory subunits include gamma-secretase-activating protein (aka gSAP), TMP1 (aka TMED10), and CD147 antigen (aka basigin). Gamma-secretase cleaves type I transmembrane protein substrates, including the cell surface receptor Notch and the amyloid-beta precursor protein.","definition_xrefs":["GOC:krc","PMID:32616437","PMID:28320827","PMID:17047368","PMID:15890777","PMID:15286082","PMID:22122073","PMID:25565961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"gamma-secretase complex","synonyms":[{"name":"CD147-gamma-secretase complex (APH-1a, PS-1, PEN-2, NCT variant)","type":"narrow"},{"name":"PS1 complex","type":"narrow"},{"name":"PS2 complex","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN1, PSENEN, NCSTN variant)","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN1, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"presenilin complex","type":"exact"}],"termid":"GO:0070765"}


id: PBO:0041642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 H","termid":"PBO:0041642"}


id: GO:0062065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a box H/ACA snoRNP complex.","definition_xrefs":["PMID:10679015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNP binding","termid":"GO:0030519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"box H/ACA snoRNP complex binding","termid":"GO:0062065"}


id: GO:0102065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphoric acid + gamma-patchoulene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete patchoulene synthase activity (obsolete GO:0102065)","termid":"GO:0102065"}


id: MONDO:0002758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly differentiated squamous cell carcinoma that arises from the vulva. It is characterized by the presence of a warty and hyperkeratinized surface, malignant cells with abundant eosinophilic cytoplasm, minimal cytologic atypia, and absence or rarity of mitotic figures. The tumor infiltrates the underlying stroma with a pushing border.","definition_xrefs":["NCIT:C6383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"},{"relation_name":"is_a","term_name":"vulvar squamous cell carcinoma","termid":"MONDO:0024609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulva verrucous carcinoma","secondary_identifiers":["DOID:3740","UMLS:C1336983","MEDGEN:234482"],"synonyms":[{"name":"mammalian vulva verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of the vulva","type":"exact"},{"name":"verrucous carcinoma of vulva","type":"exact"},{"name":"vulvar verrucous carcinoma","type":"exact"}],"termid":"MONDO:0002758","xrefs":{"Monarch":{"xref_id":"0002758"}}}


id: GO:0002837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to tumor cell","termid":"GO:0002834"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"immune response to tumor cell","termid":"GO:0002418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immune response to tumor cell","synonyms":[{"name":"regulation of immune response to tumour cell","type":"exact"}],"termid":"GO:0002837"}


id: PBO:0040925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BNC2 antisense RNA 1","termid":"PBO:0040925"}


id: PBO:0065046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B","termid":"PBO:0065046"}


id: GO:0005079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to protein kinase A and anchors it to a particular subcellular location.","definition_xrefs":["PMID:10354567"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase A anchoring activity (obsolete GO:0005079)","synonyms":[{"name":"A-kinase anchor protein activity","type":"exact"},{"name":"AKAP activity","type":"exact"},{"name":"protein kinase A anchoring activity","type":"exact"}],"termid":"GO:0005079"}


id: GO:0034856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,4E)-2-hydroxyhexa-2,4-dienoate + H2O = 4-hydroxy-2-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r1281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-hydroxyhexa-2,4-dienoate hydratase activity","secondary_identifiers":["RHEA:32535","EC:4.2.1.132"],"termid":"GO:0034856"}


id: GO:0030509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["ISBN:0878932437","PMID:17428827","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor superfamily signaling pathway","termid":"GO:0141091"},{"relation_name":"part_of","term_name":"cellular response to BMP stimulus","termid":"GO:0071773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"BMP signaling pathway","secondary_identifiers":["GO:0008101","Reactome:R-HSA-201451"],"synonyms":[{"name":"BMP receptor signaling pathway","type":"related"},{"name":"BMP signalling pathway","type":"exact"},{"name":"bone morphogenetic protein signaling pathway","type":"exact"},{"name":"bone morphogenetic protein signalling pathway","type":"exact"},{"name":"decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"decapentaplegic signaling pathway","type":"narrow"},{"name":"dpp receptor signaling pathway","type":"narrow"},{"name":"dpp receptor signalling pathway","type":"narrow"},{"name":"dpp signaling pathway","type":"narrow"}],"termid":"GO:0030509"}


id: PBO:0071484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 25","termid":"PBO:0071484"}


id: GO:1901398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta3 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta3 activation (obsolete GO:1901398)","synonyms":[{"name":"regulation of TGF-beta 3 activation","type":"exact"},{"name":"regulation of TGFB3 activation","type":"exact"},{"name":"regulation of TGFbeta 3 activation","type":"exact"}],"termid":"GO:1901398"}


id: MONDO:0018571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 5","termid":"MONDO:0016904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractures-developmental delay-Pierre Robin syndrome","secondary_identifiers":["GARD:21816","Orphanet:436003","UMLS:C5680042","MEDGEN:1805516"],"synonyms":[{"name":"5q23 microdeletion syndrome","type":"exact"}],"termid":"MONDO:0018571","xrefs":{"Monarch":{"xref_id":"0018571"}}}


id: MONDO:0019353
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85873,85874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","definition":"Stargardt disease, also known as Stargardt 1 (STGD1), is an autosomal recessive form of retinal dystrophy that is usually characterized by a progressive loss of central vision associated with irregular macular and perimacular yellow-white fundus flecks, and a so-called ''beaten bronze'' atrophic central macular lesion.","definition_xrefs":["Orphanet:827"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"age-related macular degeneration","termid":"MONDO:0005150"},{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"familial flecked retinopathy","termid":"MONDO:0016420"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Stargardt disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10062766","MESH:D000080362","NANDO:1200933","NCIT:C85078","SCTID:47673003","GARD:181","UMLS:C0271093","MEDGEN:75734","ICD10CM:H35.5","icd11.foundation:1690038580","DOID:0050817"],"synonyms":[{"name":"Stargardt 1","type":"exact"},{"name":"Stargardt disease 1","type":"narrow"},{"name":"Stargardt macular dystrophy","type":"related"},{"name":"fundus flavimaculatus","type":"exact"},{"name":"juvenile onset macular degeneration","type":"related"}],"termid":"MONDO:0019353","terms_by_termid":{"MONDO:0010819":null},"xrefs":{"Monarch":{"xref_id":"0019353"}}}


id: MONDO:0014697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any common variable immunodeficiency in which the cause of the disease is a mutation in the NFKB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, common variable, 12","secondary_identifiers":["OMIM:616576","MEDGEN:906018","UMLS:C4225277","DOID:0081154","GARD:16141"],"synonyms":[{"name":"CVID12","type":"related"},{"name":"NFKB1 common variable immunodeficiency","type":"exact"},{"name":"NFKB1 deficiency","type":"related"},{"name":"common variable immunodeficiency caused by mutation in NFKB1","type":"exact"},{"name":"immunodeficiency, common variable, 12","type":"exact"},{"name":"immunodeficiency, common variable, type 12","type":"exact"}],"termid":"MONDO:0014697","xrefs":{"Monarch":{"xref_id":"0014697"}}}


id: PATO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An increased number of physical objects that are accumulated within another physical object usually as a result of a failure to break down or remove objects in a timely manner.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"accumulation","termid":"PATO:0002269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased accumulation","synonyms":[{"name":"accumulated","type":"exact"}],"termid":"PATO:0002270"}


id: PBO:0056440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 13","termid":"PBO:0056440"}


id: PBO:0001180
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubp Five interacting potential Transmembrane Protein","termid":"PBO:0001180"}


id: GO:1905772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesodermal cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF_miRNA","GOC:rph","PMID:23765923","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell differentiation","termid":"GO:1905770"},{"relation_name":"positively_regulates","term_name":"mesodermal cell differentiation","termid":"GO:0048333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesodermal cell differentiation","synonyms":[{"name":"activation of mesoderm cell differentiation","type":"narrow"},{"name":"activation of mesodermal cell differentiation","type":"narrow"},{"name":"positive regulation of mesoderm cell differentiation","type":"exact"},{"name":"up regulation of mesoderm cell differentiation","type":"exact"},{"name":"up regulation of mesodermal cell differentiation","type":"exact"},{"name":"up-regulation of mesoderm cell differentiation","type":"exact"},{"name":"up-regulation of mesodermal cell differentiation","type":"exact"},{"name":"upregulation of mesoderm cell differentiation","type":"exact"},{"name":"upregulation of mesodermal cell differentiation","type":"exact"}],"termid":"GO:1905772"}


id: MONDO:0024333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by pain radiating from the back into the buttock and posterior/lateral aspects of the leg. Sciatica may be a manifestation of sciatic neuropathy; radiculopathy (involving the spinal nerve roots; L4, L5, S1, or S2, often associated with intervertebral disk displacement); or lesions of the cauda equina.","definition_xrefs":["MESH:D012585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sciatic neuropathy","termid":"MONDO:0006960"},{"relation_name":"is_a","term_name":"neuralgia","termid":"MONDO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"sciatica","secondary_identifiers":["UMLS:C0036396","SCTID:23056005","ICD9:724.3","MEDGEN:19893","icd11.foundation:2056651014"],"synonyms":[{"name":"bilateral sciatica","type":"related"},{"name":"bilateral sciaticas","type":"related"},{"name":"neuralgia, sciatic","type":"related"},{"name":"neuralgias, sciatic","type":"related"},{"name":"sciatic Neuralgias","type":"related"},{"name":"sciatic neuralgia","type":"related"},{"name":"sciatica, bilateral","type":"related"}],"termid":"MONDO:0024333","xrefs":{"Monarch":{"xref_id":"0024333"}}}


id: PBO:0116743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2","termid":"PBO:0116743"}


id: GO:0019692
data:
  {"annotated_genes":["SJAG_04665","SJAG_00885","SJAG_02948","SJAG_02874","SJAG_04487","SJAG_03771","SJAG_04657","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[95244,92201,107013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[98748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[70637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[69705,79135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[68266,70638,92202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[70636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[69704,79243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[79241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose phosphate metabolism","type":"exact"}],"termid":"GO:0019692","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null,"GO:0035863":null,"GO:0046081":null}}


id: PBO:0011082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"para-hydroxybenzoate--polyprenyltransferase Ppt1","termid":"PBO:0011082"}


id: MONDO:0006016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete West Nile encephalitis (obsolete MONDO:0006016)","termid":"MONDO:0006016","xrefs":{"Monarch":{"xref_id":"0006016"}}}


id: PBO:0091461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi3","termid":"PBO:0091461"}


id: PBO:0052818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 84","termid":"PBO:0052818"}


id: MONDO:1012793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in three-spined stickleback due to a mutation in the HPS5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, HPS5-related, three-spined stickleback","secondary_identifiers":["OMIA:002116-69293"],"synonyms":[{"name":"coat colour, albinism, oculocutaneous, HPS5-related in Gasterosteus aculeatus (three-spined stickleback)","type":"exact"}],"termid":"MONDO:1012793","xrefs":{"Monarch":{"xref_id":"1012793"}}}


id: PBO:0071007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 9","termid":"PBO:0071007"}


id: PR:O74875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC330.03c gene.","definition_xrefs":["UniProtKB:O74875","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized heme-binding protein C330.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.03c","synonyms":[{"name":"Spom972h-SPCC330.03c","type":"exact"}],"termid":"PR:O74875"}


id: GO:1901840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of RNA polymerase I regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of RNA polymerase I regulatory region sequence-specific DNA binding (obsolete GO:1901840)","synonyms":[{"name":"down regulation of RNA polymerase I regulatory region sequence-specific DNA binding","type":"exact"},{"name":"down-regulation of RNA polymerase I regulatory region sequence-specific DNA binding","type":"exact"},{"name":"downregulation of RNA polymerase I regulatory region sequence-specific DNA binding","type":"exact"},{"name":"inhibition of RNA polymerase I regulatory region sequence-specific DNA binding","type":"narrow"}],"termid":"GO:1901840"}


id: PBO:0040565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 1","termid":"PBO:0040565"}


id: PBO:0005109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug174","termid":"PBO:0005109"}


id: PBO:0087369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT methyltransferase; catalyzes omega-monomethylation of Rps3p on Arg-146; not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism","termid":"PBO:0087369"}


id: PBO:0004920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer beta' subunit (predicted)","termid":"PBO:0004920"}


id: MONDO:0008290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"porokeratosis of Mibelli","termid":"MONDO:0019141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 1, Mibelli type","secondary_identifiers":["GARD:15108","OMIM:175800"],"synonyms":[{"name":"POROK1","type":"exact"},{"name":"porokeratosis 1, MIBELLI type","type":"related"},{"name":"porokeratosis 1, multiple types","type":"related"},{"name":"porokeratosis of Mibelli","type":"related"}],"termid":"MONDO:0008290","xrefs":{"Monarch":{"xref_id":"0008290"}}}


id: PBO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Vip1","termid":"PBO:0000846"}


id: PBO:0038628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical chemokine receptor 4","termid":"PBO:0038628"}


id: GO:0000224
data:
  {"annotated_genes":["SJAG_03227"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104495],"is_not":false,"summary":null,"term":"GO:0000224"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-N-(N-acetyl-D-glucosaminyl)-protein + H2O = N-acetyl-beta-D-glucosaminylamine + peptide L-aspartate. This reaction is the hydrolysis of an N4-(acetyl-beta-D-glucosaminyl)asparagine residue in which the N-acetyl-D-glucosamine residue may be further glycosylated, to yield a (substituted) N-acetyl-beta-D-glucosaminylamine and the peptide containing an aspartic residue.","definition_xrefs":["EC:3.5.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03227":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.5.1.52-RXN","Reactome:R-HSA-8850594"],"synonyms":[{"name":"N-glycanase activity","type":"related"},{"name":"N-linked-glycopeptide-(N-acetyl-beta-D-glucosaminyl)-L-asparagine amidohydrolase activity","type":"related"},{"name":"N-oligosaccharide glycopeptidase activity","type":"related"},{"name":"PNGase","type":"exact"},{"name":"PNGase A","type":"related"},{"name":"PNGase F","type":"related"},{"name":"glycopeptidase activity","type":"broad"},{"name":"glycopeptide N-glycosidase activity","type":"broad"},{"name":"jack-bean glycopeptidase","type":"narrow"},{"name":"peptide:N-glycanase","type":"related"}],"termid":"GO:0000224","terms_by_termid":{"GO:0000224":null}}


id: GO:0052707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway resulting in the formation of N-alpha,N-alpha,N-alpha-trimethyl-L-histidine from histidine. Histidine undergoes three methylations by a histidine-alpha-N-methyltransferase (EC:2.1.1.44) to form N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (also known as hercynine or histidine betaine).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthesis from histidine (obsolete GO:0052707)","synonyms":[{"name":"hercynine biosynthesis from histidine","type":"exact"},{"name":"histidine betaine biosynthesis from histidine","type":"exact"},{"name":"histidine catabolic process to hercynine","type":"exact"},{"name":"histidine catabolism to N-alpha,N-alpha,N-alpha-trimethyl-L-histidine","type":"exact"},{"name":"histidine catabolism to hercynine","type":"exact"}],"termid":"GO:0052707"}


id: MONDO:0008483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stutter disorder","termid":"MONDO:0000723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stuttering, familial persistent, 1","secondary_identifiers":["UMLS:C3489627","MEDGEN:483580","OMIM:184450"],"synonyms":[{"name":"STUT1","type":"exact"},{"name":"stammering","type":"related"},{"name":"stuttering, familial persistent, 1","type":"exact"}],"termid":"MONDO:0008483","xrefs":{"Monarch":{"xref_id":"0008483"}}}


id: PBO:0041033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2C","termid":"PBO:0041033"}


id: PBO:0072079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 9","termid":"PBO:0072079"}


id: GO:0032967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of collagen metabolic process","termid":"GO:0010714"},{"relation_name":"is_a","term_name":"regulation of collagen biosynthetic process","termid":"GO:0032965"},{"relation_name":"positively_regulates","term_name":"collagen biosynthetic process","termid":"GO:0032964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collagen biosynthetic process","synonyms":[{"name":"positive regulation of collagen anabolism","type":"exact"},{"name":"positive regulation of collagen biosynthesis","type":"exact"},{"name":"positive regulation of collagen formation","type":"exact"},{"name":"positive regulation of collagen synthesis","type":"exact"}],"termid":"GO:0032967"}


id: PR:O94295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.11","synonyms":[{"name":"Spom972h-pus2","type":"exact"},{"name":"tRNA pseudouridylate synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-uridine isomerase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94295"}


id: PBO:0028554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_cytoplasmic_microtubule_depolymerization","termid":"PBO:0028554"}


id: GO:0004089
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77384],"is_not":false,"summary":null,"term":"GO:0004089"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogencarbonate + H+ = CO2 + H2O.","definition_xrefs":["EC:4.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"carbonate dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1237047","Reactome:R-HSA-1475022","Reactome:R-HSA-1475025","Reactome:R-HSA-1237059","Reactome:R-HSA-1475017","Reactome:R-HSA-1475436","Reactome:R-HSA-1475032","Reactome:R-HSA-1237045","Reactome:R-HSA-1475028","MetaCyc:RXN0-5224","Reactome:R-HSA-1475435","Reactome:R-HSA-1475026","RHEA:10748","Reactome:R-HSA-1237081"],"synonyms":[{"name":"anhydrase activity","type":"related"},{"name":"carbonate anhydrase activity","type":"related"},{"name":"carbonate hydro-lyase (carbon-dioxide-forming)","type":"related"},{"name":"carbonate hydro-lyase activity","type":"related"},{"name":"carbonic acid anhydrase activity","type":"related"},{"name":"carbonic anhydrase A","type":"related"},{"name":"carbonic anhydrase activity","type":"exact"},{"name":"carbonic dehydratase activity","type":"related"},{"name":"carboxyanhydrase activity","type":"related"}],"termid":"GO:0004089","terms_by_termid":{"GO:0004089":null}}


id: PBO:0069072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 319, pseudogene","termid":"PBO:0069072"}


id: MONDO:0859237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-methylglutaconic aciduria, type VIIA","secondary_identifiers":["MEDGEN:1813022","DOID:0081133","OMIM:619835","UMLS:C5676967"],"termid":"MONDO:0859237","xrefs":{"Monarch":{"xref_id":"0859237"}}}


id: GO:1902473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22588719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to synapse","synonyms":[{"name":"regulation of protein localisation to synapse","type":"exact"}],"termid":"GO:1902473"}


id: GO:0033631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits.","definition_xrefs":["GOC:add","PMID:14754902","PMID:12213832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"},{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion mediated by integrin","synonyms":[{"name":"cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033631"}


id: PBO:0046975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member B2","termid":"PBO:0046975"}


id: PBO:0001261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk13 (predicted)","termid":"PBO:0001261"}


id: SO:1000069
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the deletion of two nucleotides.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000069 sequence_variant_causing_minus_2_frameshift (obsolete SO:1000069)","synonyms":[{"name":"minus 2 frameshift mutation","type":"exact"},{"name":"sequence variant causing minus 2 frameshift","type":"exact"}],"termid":"SO:1000069"}


id: FYPO:0004886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear envelope is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear envelope during vegetative growth","termid":"FYPO:0004885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nuclear envelope during vegetative growth","synonyms":[{"name":"abolished protein localisation to nuclear envelope during vegetative growth","type":"exact"},{"name":"abolished protein localization to nuclear envelope during mitotic cell cycle","type":"related"},{"name":"protein localization to nuclear envelope abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0004886"}


id: MONDO:0032673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 7, autosomal recessive","secondary_identifiers":["OMIM:618317","UMLS:C5193025","MEDGEN:1683911"],"synonyms":[{"name":"BASAL GANGLIA CALCIFICATION, IDIOPATHIC, 7, AUTOSOMAL RECESSIVE","type":"related"},{"name":"IBGC7","type":"related"}],"termid":"MONDO:0032673","xrefs":{"Monarch":{"xref_id":"0032673"}}}


id: PBO:0052490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 4","termid":"PBO:0052490"}


id: PBO:0085126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; specifically associated with the U3 snoRNA, part of the large ribonucleoprotein complex known as the small subunit (SSU) processome, required for 18S rRNA biogenesis, part of the active pre-rRNA processing complex","termid":"PBO:0085126"}


id: PBO:0052563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C","termid":"PBO:0052563"}


id: GO:0090520
data:
  {"annotated_genes":["SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104943],"is_not":false,"summary":null,"term":"GO:0090520"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by a sphingolipid.","definition_xrefs":["PMID:9525917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sphingolipid mediated signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ceramide 1-phosphate signaling pathway","type":"narrow"},{"name":"ceramide signaling pathway","type":"narrow"},{"name":"sphingolipid mediated signal transduction","type":"exact"},{"name":"sphingolipid signaling pathway","type":"related"},{"name":"sphingolipid-mediated signaling pathway","type":"exact"},{"name":"sphingosine signaling pathway","type":"narrow"}],"termid":"GO:0090520","terms_by_termid":{"GO:0090520":null}}


id: FYPO:0001165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell that is exposed to anaerobic conditions fails to grow upon being returned to aerobic conditions, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable cell following anaerobic growth","synonyms":[{"name":"inviable following anaerobic vegetative growth","type":"exact"},{"name":"lethal; cell following anaerobic growth","type":"exact"}],"termid":"FYPO:0001165"}


id: GO:0052703
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103378,111284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[103379,111285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"modified histidine metabolic process","termid":"GO:0052701"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modified histidine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular histidine derivative anabolism","type":"exact"},{"name":"cellular histidine derivative biosynthesis","type":"exact"},{"name":"cellular histidine derivative biosynthetic process","type":"exact"},{"name":"cellular histidine derivative formation","type":"exact"},{"name":"cellular histidine derivative synthesis","type":"exact"},{"name":"cellular modified histidine anabolism","type":"exact"},{"name":"cellular modified histidine biosynthesis","type":"exact"},{"name":"cellular modified histidine formation","type":"exact"},{"name":"cellular modified histidine synthesis","type":"exact"},{"name":"histidine derivative biosynthetic process","type":"exact"}],"termid":"GO:0052703","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: GO:1901878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of calcium ion binding.","definition_xrefs":["PMID:16432188","GOC:rl","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion binding (obsolete GO:1901878)","synonyms":[{"name":"activation of calcium ion binding","type":"narrow"},{"name":"activation of calcium ion storage activity","type":"related"},{"name":"positive regulation of calcium ion storage activity","type":"related"},{"name":"up regulation of calcium ion binding","type":"exact"},{"name":"up regulation of calcium ion storage activity","type":"related"},{"name":"up-regulation of calcium ion binding","type":"exact"},{"name":"up-regulation of calcium ion storage activity","type":"related"},{"name":"upregulation of calcium ion binding","type":"exact"},{"name":"upregulation of calcium ion storage activity","type":"related"}],"termid":"GO:1901878"}


id: PBO:0051121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-6 (pseudogene)","termid":"PBO:0051121"}


id: MONDO:0019637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal hypoplasia is a developmental anomaly in which one or both kidneys (unilateral or bilateral renal hypoplasia, respectively) have a deficit in the number of nephrons and may be small. Oligomeganephronia represents a severe variant of hypoplasia in which nephron number is reduced by 80% and nephrons are markedly hypertrophied.","definition_xrefs":["Orphanet:93101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypoplasia","secondary_identifiers":["MEDGEN:120571","MedDRA:10049102","GARD:19172","UMLS:C0266295","NANDO:2200155","DOID:0080204","SCTID:32659003","HP:0000089"],"synonyms":[{"name":"renal hypoplasia","type":"exact"},{"name":"renal hypoplasia (disease)","type":"exact"}],"termid":"MONDO:0019637","xrefs":{"Monarch":{"xref_id":"0019637"}}}


id: PBO:0069687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 966, pseudogene","termid":"PBO:0069687"}


id: PBO:0069384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 644, pseudogene","termid":"PBO:0069384"}


id: PBO:0084119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme a synthase; required for the hydroxylation of heme O to form heme A, an essential prosthetic group for cytochrome c oxidase; oligomerization is required for function","termid":"PBO:0084119"}


id: MONDO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy (obsolete MONDO:0000206)","synonyms":[{"name":"obsolete cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy; CADASIL","type":"exact"}],"termid":"MONDO:0000206","xrefs":{"Monarch":{"xref_id":"0000206"}}}


id: PBO:0054199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1579","termid":"PBO:0054199"}


id: PBO:0002563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein alpha subunit (predicted)","termid":"PBO:0002563"}


id: GO:0070543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to linoleic acid","synonyms":[{"name":"response to linoleate","type":"exact"}],"termid":"GO:0070543"}


id: GO:0032658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-15 production","secondary_identifiers":["GO:0045372"],"synonyms":[{"name":"regulation of IL-15 production","type":"exact"},{"name":"regulation of interleukin-15 biosynthetic process","type":"narrow"}],"termid":"GO:0032658"}


id: FYPO:0001663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular cAMP level","termid":"FYPO:0001661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular cAMP level during glucose starvation","synonyms":[{"name":"increased cAMP accumulation during cellular response to glucose starvation","type":"related"},{"name":"increased cellular cAMP level during glucose depletion","type":"exact"},{"name":"increased cellular cAMP level during glucose deprivation","type":"exact"},{"name":"increased cellular cAMP level during glucose limitation","type":"related"},{"name":"increased cellular cAMP level in response to glucose starvation","type":"exact"},{"name":"increased cellular cyclic AMP level and during cellular response to glucose starvation","type":"exact"}],"termid":"FYPO:0001663"}


id: PBO:0039788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor","termid":"PBO:0039788"}


id: PBO:0039838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 8","termid":"PBO:0039838"}


id: GO:0075312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangium development, a process that leads to the formation of sporangium, a single-celled or many-celled structure in which spores are produced, as in fungi, algae, mosses, and ferns, gymnosperms, angiosperms.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"negatively_regulates","term_name":"sporangium development","termid":"GO:0043582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangium development","termid":"GO:0075312"}


id: FYPO:0006031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication begins later than normal.","definition_xrefs":["PMID:28481910","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of mitotic DNA replication initiation","synonyms":[{"name":"delayed mitotic DNA replication initiation","type":"exact"},{"name":"delayed onset of DNA replication initiation during mitotic cell cycle","type":"exact"},{"name":"delayed onset of DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006031"}


id: PBO:0016053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, Prp19 complex subunit Cdc5","termid":"PBO:0016053"}


id: PR:O42900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.07","synonyms":[{"name":"Spom972h-ppk19","type":"exact"}],"termid":"PR:O42900"}


id: FYPO:0001761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1/S transition of the mitotic cell cycle is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic G1/S phase transition","synonyms":[{"name":"normal G1/S phase transition during mitotic cell cycle","type":"exact"},{"name":"normal cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"normal mitotic G1/S phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0001761"}


id: GO:2001205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of osteoclast differentiation","termid":"GO:0045671"},{"relation_name":"is_a","term_name":"regulation of osteoclast development","termid":"GO:2001204"},{"relation_name":"negatively_regulates","term_name":"osteoclast development","termid":"GO:0036035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoclast development","synonyms":[{"name":"negative regulation of osteoclast cell development","type":"exact"}],"termid":"GO:2001205"}


id: GO:1900224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1900224)","synonyms":[{"name":"activation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"activation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"activation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"positive regulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"positive regulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"positive regulation of nodal signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"up regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up regulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"up-regulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"up-regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"up-regulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"upregulation of nodal signaling of determination of left/right asymmetry in lateral mesoderm","type":"exact"},{"name":"upregulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"upregulation of nodal signaling pathway of determination of left/right asymmetry in lateral mesoderm","type":"exact"}],"termid":"GO:1900224"}


id: PBO:0078329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-1","termid":"PBO:0078329"}


id: GO:0030977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to taurine.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate binding","termid":"GO:0043210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"taurine binding","termid":"GO:0030977"}


id: MONDO:0019886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 13q is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 13, with variable phenotype principally characterized by intellectual disability, psychomotor delay, craniofacial dysmorphism (incl. microcephaly, bushy eyebrows, long curled eyelashes, hypotelorism, low-set ears, prominent nasal bridge, long philtrum, high palate, thin upper lip), short neck, polydactyly, and hemangiomas. Cardiac, urogenital and neural tube defects, as well as umbilical and inguinal hernias, seizures and hypotonia, have also been reported.","definition_xrefs":["Orphanet:96105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 13q trisomy","termid":"MONDO:0022177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 13q","secondary_identifiers":["GARD:19319","SCTID:764454003","UMLS:C4706933","MEDGEN:1639680"],"synonyms":[{"name":"distal duplication 13q","type":"exact"},{"name":"distal trisomy type 13q","type":"exact"},{"name":"telomeric duplication 13q","type":"exact"},{"name":"trisomy 13qter","type":"exact"}],"termid":"MONDO:0019886","xrefs":{"Monarch":{"xref_id":"0019886"}}}


id: PBO:0086642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YNR021W is not an essential gene","termid":"PBO:0086642"}


id: GO:0050036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonate + NAD+ = 3-dehydro-L-threonate + H+ + NADH.","definition_xrefs":["EC:1.1.1.129","RHEA:23376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-threonate 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:L-THREONATE-3-DEHYDROGENASE-RXN","KEGG_REACTION:R03733"],"synonyms":[{"name":"L-threonate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"L-threonic acid dehydrogenase activity","type":"related"},{"name":"threonate dehydrogenase activity","type":"related"}],"termid":"GO:0050036"}


id: MOD:01507
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["OMSSA:176","Unimod:214#N-term","OMSSA:211","Unimod:889#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","termid":"MOD:01711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ117nterm","type":"exact"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"},{"name":"mTRAQ heavy on nterm","type":"exact"}],"termid":"MOD:01507"}


id: PBO:0030672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0030672"}


id: PBO:0067957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 259","termid":"PBO:0067957"}


id: GO:0043767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-pyrrolysine + tRNA(Pyl) = AMP + diphosphate + L-pyrrolysyl-tRNA(Pyl).","definition_xrefs":["RHEA:19277","PMID:15314242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140098","GO:0016874","GO:0003674","GO:0140101","GO:0003824"],"is_obsolete":false,"name":"pyrrolysyl-tRNA synthetase activity","secondary_identifiers":["EC:6.1.1.26","MetaCyc:6.1.1.26-RXN"],"synonyms":[{"name":"PylRS","type":"exact"},{"name":"pyrrolysine-tRNA ligase activity","type":"exact"}],"termid":"GO:0043767"}


id: PBO:0050553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human papillomavirus (type 18) integration site 2","termid":"PBO:0050553"}


id: PBO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha catalytic subunit","termid":"PBO:0002046"}


id: PBO:0041977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 18","termid":"PBO:0041977"}


id: PBO:0046939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member A","termid":"PBO:0046939"}


id: MONDO:0020661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An undifferentiated soft tissue sarcoma characterized by the presence of uniform round or ovoid malignant cells with a high nuclear to cytoplasmic ratio.","definition_xrefs":["NCIT:C121799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated round cell sarcoma","secondary_identifiers":["UMLS:C4048304","MEDGEN:885673"],"synonyms":[{"name":"undifferentiated round cell sarcoma","type":"exact"}],"termid":"MONDO:0020661","xrefs":{"Monarch":{"xref_id":"0020661"}}}


id: MONDO:0044992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the mouth mucosa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouth mucosa disorder","secondary_identifiers":["UMLS:C1290071","SCTID:128046007","MEDGEN:712457"],"synonyms":[{"name":"disease of mouth mucosa","type":"exact"},{"name":"disease or disorder of mouth mucosa","type":"exact"},{"name":"disorder of mouth mucosa","type":"exact"},{"name":"disorder of oral mucous membrane","type":"exact"},{"name":"mouth mucosa disease or disorder","type":"exact"},{"name":"oral mucous membrane disease","type":"exact"}],"termid":"MONDO:0044992","xrefs":{"Monarch":{"xref_id":"0044992"}}}


id: GO:0001814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of antibody-dependent cellular cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of type IIa hypersensitivity","termid":"GO:0001797"},{"relation_name":"is_a","term_name":"regulation of antibody-dependent cellular cytotoxicity","termid":"GO:0001813"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated cytotoxicity","termid":"GO:0001911"},{"relation_name":"negatively_regulates","term_name":"antibody-dependent cellular cytotoxicity","termid":"GO:0001788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antibody-dependent cellular cytotoxicity","synonyms":[{"name":"down regulation of antibody-dependent cellular cytotoxicity","type":"exact"},{"name":"down-regulation of antibody-dependent cellular cytotoxicity","type":"exact"},{"name":"downregulation of antibody-dependent cellular cytotoxicity","type":"exact"},{"name":"inhibition of antibody-dependent cellular cytotoxicity","type":"narrow"},{"name":"negative regulation of antibody dependent cell death","type":"exact"},{"name":"negative regulation of antibody dependent cell killing","type":"exact"},{"name":"negative regulation of antibody-dependent cell death","type":"exact"},{"name":"negative regulation of antibody-dependent cell killing","type":"exact"}],"termid":"GO:0001814"}


id: PBO:0069046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 291, pseudogene","termid":"PBO:0069046"}


id: PBO:0041782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyphosine","termid":"PBO:0041782"}


id: MONDO:0021459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of esophagus","termid":"MONDO:0021355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of esophagus","secondary_identifiers":["MEDGEN:102297","SCTID:92091003","ICD9:211.0","ICD10CM:D13.0","NCIT:C3598","UMLS:C0153942"],"synonyms":[{"name":"benign esophageal neoplasm","type":"exact"},{"name":"benign esophageal tumor","type":"exact"},{"name":"benign esophageal tumour","type":"exact"},{"name":"benign esophagus neoplasm","type":"exact"},{"name":"benign esophagus tumor","type":"exact"},{"name":"benign neoplasm of the esophagus","type":"exact"},{"name":"benign neoplasm of the oesophagus","type":"exact"},{"name":"benign oesophagus neoplasm","type":"exact"},{"name":"benign oesophagus tumour","type":"exact"},{"name":"benign tumor of esophagus","type":"exact"},{"name":"benign tumor of the esophagus","type":"exact"},{"name":"benign tumour of oesophagus","type":"exact"},{"name":"benign tumour of the oesophagus","type":"exact"},{"name":"esophagus benign neoplasm","type":"exact"},{"name":"oesophagus benign neoplasm","type":"exact"}],"termid":"MONDO:0021459","xrefs":{"Monarch":{"xref_id":"0021459"}}}


id: GO:0060193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of lipase activity, the hydrolysis of a lipid or phospholipid.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipase activity","termid":"GO:0060193"}


id: PBO:0004929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A binding protein (predicted)","termid":"PBO:0004929"}


id: PBO:0066819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 118","termid":"PBO:0066819"}


id: GO:0032100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appetite","synonyms":[{"name":"activation of appetite","type":"narrow"},{"name":"appetite stimulation","type":"related"},{"name":"positive regulation of hunger","type":"related"},{"name":"stimulation of appetite","type":"narrow"},{"name":"up regulation of appetite","type":"exact"},{"name":"up-regulation of appetite","type":"exact"},{"name":"upregulation of appetite","type":"exact"}],"termid":"GO:0032100"}


id: PBO:0005876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Methionine, mitochondrial","termid":"PBO:0005876"}


id: MONDO:0011845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 3","secondary_identifiers":["OMIM:607498","MEDGEN:375283","UMLS:C1843782"],"synonyms":[{"name":"MGR3","type":"related"},{"name":"migraine with or without aura, susceptibility to, 3","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0011845","xrefs":{"Monarch":{"xref_id":"0011845"}}}


id: GO:0035542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of assembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"SNARE complex assembly","termid":"GO:0035493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of SNARE complex assembly","termid":"GO:0035542"}


id: GO:0097060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized area of membrane on either the presynaptic or the postsynaptic side of a synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.","definition_xrefs":["GOC:BHF","PMID:20410104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"synaptic membrane","termid":"GO:0097060"}


id: PBO:0108951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOPL pseudogene 3","termid":"PBO:0108951"}


id: PBO:0088234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein","termid":"PBO:0088234"}


id: MONDO:0013861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyotrophic lateral sclerosis type 17 (obsolete MONDO:0013861)","termid":"MONDO:0013861","xrefs":{"Monarch":{"xref_id":"0013861"}}}


id: MONDO:1011178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis that occurs in Japanese quail.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis, Japanese quail","secondary_identifiers":["OMIA:000755-93934"],"termid":"MONDO:1011178","xrefs":{"Monarch":{"xref_id":"1011178"}}}


id: PBO:0030646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_rate_at_high_pH","termid":"PBO:0030646"}


id: PBO:0045999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1A X-linked","termid":"PBO:0045999"}


id: PBO:0063222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 2","termid":"PBO:0063222"}


id: MOD:01892
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-crotonyl-L-lysine.","definition_xrefs":["RESID:AA0567","PubMed:21925322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-crotonyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(2E)-but-2-enamido]hexanoic acid","type":"exact"},{"name":"(2S)-2-amino-6-[(2E)-but-2-enoylamino]hexanoic acid","type":"exact"},{"name":"(2S)-2-azanyl-6-[(2E)-but-2-enoylazanyl]hexanoic acid","type":"exact"},{"name":"MOD_RES N6-crotonyl-L-lysine","type":"exact"},{"name":"N(epsilon)-crotonyllysine","type":"exact"},{"name":"N6-(E)-crotonyllysine","type":"exact"},{"name":"N6-[(2E)-2-butenoyl]-L-lysine","type":"exact"},{"name":"N6-crotonyl-L-lysine","type":"exact"},{"name":"N6-crotonyllysine","type":"exact"},{"name":"N6-trans-crotonyllysine","type":"exact"}],"termid":"MOD:01892"}


id: PBO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter family","termid":"PBO:0001765"}


id: PBO:0005507
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GPI8","termid":"PBO:0005507"}


id: PBO:0047047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member B","termid":"PBO:0047047"}


id: PBO:0003793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga4","termid":"PBO:0003793"}


id: MONDO:0958196
data:
  {"annotated_genes":["SJAG_03406","SJAG_02782"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86140,86141],"is_not":false,"summary":null,"term":"MONDO:0958196"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, early-onset","termid":"MONDO:0957599"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02782":null,"SJAG_03406":null},"genotype_count":0,"is_obsolete":false,"name":"epilepsy, early-onset, 3, with or without developmental delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882674","DOID:0070472","OMIM:620465","MEDGEN:1847911"],"termid":"MONDO:0958196","terms_by_termid":{"MONDO:0958196":null},"xrefs":{"Monarch":{"xref_id":"0958196"}}}


id: GO:0032772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of a tyrosinase enzyme.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of tyrosinase activity (obsolete GO:0032772)","synonyms":[{"name":"down regulation of monophenol oxygenase activity","type":"exact"},{"name":"down-regulation of monophenol oxygenase activity","type":"exact"},{"name":"downregulation of monophenol oxygenase activity","type":"exact"},{"name":"inhibition of monophenol oxygenase activity","type":"narrow"},{"name":"negative regulation of monophenol monooxygenase activity","type":"related"},{"name":"negative regulation of monophenol oxygenase activity","type":"exact"}],"termid":"GO:0032772"}


id: MONDO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete breast ductal carcinoma (obsolete MONDO:0002484)","termid":"MONDO:0002484","xrefs":{"Monarch":{"xref_id":"0002484"}}}


id: FYPO:0000784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nucleus is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to nucleus during vegetative growth","secondary_identifiers":["FYPO:0001251"],"synonyms":[{"name":"ectopic protein localization to nucleus during vegetative growth","type":"exact"},{"name":"protein mislocalised to nucleus during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000784"}


id: FYPO:0004682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyadenylated 5S rRNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal polyadenylated 5S rRNA level","synonyms":[{"name":"normal polyadenylated 5S rRNA accumulation","type":"related"},{"name":"normal polyadenylated 5S rRNA level during mitotic cell cycle","type":"related"},{"name":"normal polyadenylated 5S rRNA level during vegetative growth","type":"exact"},{"name":"normal polyadenylated 5S rRNA transcript level","type":"exact"}],"termid":"FYPO:0004682"}


id: PBO:0062440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 104 pseudogene","termid":"PBO:0062440"}


id: PBO:0087049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L23A; homologous to mammalian ribosomal protein L23 and bacterial L14; RPL23A has a paralog, RPL23B, that arose from the whole genome duplication","termid":"PBO:0087049"}


id: GO:0009091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of homoserine, alpha-amino-gamma-hydroxybutyric acid.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"homoserine metabolic process","termid":"GO:0009092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"homoserine catabolic process","secondary_identifiers":["MetaCyc:HOMOCYSDEGR-PWY"],"synonyms":[{"name":"homoserine breakdown","type":"exact"},{"name":"homoserine catabolism","type":"exact"},{"name":"homoserine degradation","type":"exact"}],"termid":"GO:0009091"}


id: PBO:0060857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 3","termid":"PBO:0060857"}


id: PBO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1 pseudogene 1","termid":"PBO:0048394"}


id: MONDO:0700080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vascular malformation in which the cause of the disease is a variation in the EPHB4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular malformation","termid":"MONDO:0024291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPHB4-associated vascular malformation spectrum","termid":"MONDO:0700080","xrefs":{"Monarch":{"xref_id":"0700080"}}}


id: MONDO:0800028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare paroxysmal movement disorder, with childhood or adolescent onset, characterized by paroxysmal choreiform, dystonic, and myoclonic movements involving the limbs (mostly distal upper limbs), neck and/or face, which can progressively increase in both frequency and severity until they become nearly constant. Patients may also present with delayed motor milestones, perioral and periorbital dyskinesias, dysarthria, hypotonia, and weakness.","definition_xrefs":["Orphanet:324588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"dyskinesia with orofacial involvement","termid":"MONDO:0031115"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyskinesia with orofacial involvement, autosomal dominant","secondary_identifiers":["SCTID:763352005","UMLS:C5551343","GARD:12722","OMIM:606703","MEDGEN:1790407","ICD10CM:G51.4","MESH:C564676"],"synonyms":[{"name":"ADCY5-related dyskinesia","type":"related"},{"name":"FDFM","type":"exact"},{"name":"dyskinesia, familial, with facial myokymia","type":"exact"}],"termid":"MONDO:0800028","xrefs":{"Monarch":{"xref_id":"0800028"}}}


id: PBO:0056231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI1 antisense RNA 1","termid":"PBO:0056231"}


id: MONDO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast lower-inner quadrant cancer","secondary_identifiers":["ICD10CM:C50.3","UMLS:C0153551","ICD9:174.3","DOID:1649","MEDGEN:509325","SCTID:188153009"],"synonyms":[{"name":"malignant neoplasm of lower-inner quadrant of female breast","type":"exact"}],"termid":"MONDO:0002068","xrefs":{"Monarch":{"xref_id":"0002068"}}}


id: GO:0034086
data:
  {"annotated_genes":["SJAG_01601","SJAG_04259","SJAG_00229","SJAG_04126","SJAG_00600","SJAG_01805","SJAG_03681","SJAG_01082","SJAG_03926","SJAG_03989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101029,113526,104253,115644,107575,112972,93561,114242,101549,98884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate.","definition_xrefs":["GOC:mah","PMID:14623866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034086","terms_by_termid":{"GO:1990813":null}}


id: MONDO:0859172
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87101],"is_not":false,"summary":null,"term":"MONDO:0859172"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hemolytic disease of fetus and newborn, RH-induced","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1789316","OMIM:619462","UMLS:C0748400"],"termid":"MONDO:0859172","terms_by_termid":{"MONDO:0859172":null},"xrefs":{"Monarch":{"xref_id":"0859172"}}}


id: GO:0015830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of diaminopimelate, the anion of 2,6-diaminoheptanedioic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"fatty acid derivative transport","termid":"GO:1901571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"diaminopimelate transport","termid":"GO:0015830"}


id: PBO:0045966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"egl-9 family hypoxia-inducible factor 3 pseudogene 1","termid":"PBO:0045966"}


id: PBO:0060246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCBP2 antisense RNA 1","termid":"PBO:0060246"}


id: PBO:0050536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepsin","termid":"PBO:0050536"}


id: PBO:0048685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 4","termid":"PBO:0048685"}


id: PBO:0036474
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIStidine requiring","termid":"PBO:0036474"}


id: MONDO:0001889
data:
  {"annotated_genes":["SJAG_04114","SJAG_04950","SJAG_00377","SJAG_04738","SJAG_03720","SJAG_02339","SJAG_03051","SJAG_02954","SJAG_03418","SJAG_02690","SJAG_04703","SJAG_03698","SJAG_04148","SJAG_00103","SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[85735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[86724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[86970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[85780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[85396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[86187,86186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[85481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[85883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[86778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86371,86372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"The inability of the ovaries to function.","definition_xrefs":["NCIT:C113351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"ovarian dysfunction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:509544","EFO:0009003","icd11.foundation:1801368748","ICD10CM:E28","ICD9:256.8","UMLS:C0154208","ICD9:256.3","SCTID:37102008","ICD9:256.9","DOID:1414","ICD9:256.39"],"synonyms":[{"name":"ovarian failure","type":"exact"},{"name":"ovarian hypofunction","type":"exact"},{"name":"ovarian insufficiency","type":"exact"}],"termid":"MONDO:0001889","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0001889"}}}


id: GO:0001962
data:
  {"annotated_genes":["SJAG_03149","SJAG_03150"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110457,110463],"is_not":false,"summary":null,"term":"GO:0001962"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule, such as GDP-galactose or UDP-galactose, to an oligosaccharide, forming an alpha-(1->3) linkage.","definition_xrefs":["PMID:10854427","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isoglobotriaosylceramide synthase","type":"narrow"}],"termid":"GO:0001962","terms_by_termid":{"GO:0001962":null}}


id: PBO:0060205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial E3 ubiquitin protein ligase 1","termid":"PBO:0060205"}


id: PBO:0051990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"janus kinase and microtubule interacting protein 2","termid":"PBO:0051990"}


id: GO:0003084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the force with which blood travels through the systemic arterial circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood pressure","termid":"GO:0045777"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"}


id: GO:1902651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["GO_REF:0000058","PMID:22199252","GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2A-H2B dimer displacement (obsolete GO:1902651)","synonyms":[{"name":"activation of histone H2A-H2B dimer displacement","type":"narrow"},{"name":"up regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"up-regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"upregulation of histone H2A-H2B dimer displacement","type":"exact"}],"termid":"GO:1902651"}


id: MONDO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Granulomatous inflammation of the testis. It is characterized by the formation of granulomas around the seminiferous tubules. History of trauma may be present. It is assumed to be a reactive process due to autoimmune phenomena.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orchitis","termid":"MONDO:0006882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-specific granulomatous orchitis","secondary_identifiers":["UMLS:C0436545","MEDGEN:98504","DOID:3089","SCTID:50390006","NCIT:C27162"],"synonyms":[{"name":"granulomatous orchitis","type":"broad"}],"termid":"MONDO:0002509","xrefs":{"Monarch":{"xref_id":"0002509"}}}


id: PBO:0080603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 37","termid":"PBO:0080603"}


id: PBO:0057183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 338","termid":"PBO:0057183"}


id: PBO:0068992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 236, pseudogene","termid":"PBO:0068992"}


id: FYPO:0005331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-prone translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-prone translesion synthesis","termid":"FYPO:0003892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"decreased error-prone translesion synthesis across TT-(6-4)","type":"exact"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005331"}


id: PBO:0059535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Phe (UUU/C)","termid":"PBO:0059535"}


id: PBO:0075328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 1","termid":"PBO:0075328"}


id: PBO:0076644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 1","termid":"PBO:0076644"}


id: MONDO:0005776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by nematodes of the genus Gnathostoma, which is commonly found in Southeast Asia, and which is transmitted via the consumption of contaminated raw/undercooked birds, eels, fish, frogs, or reptiles. The pattern of symptoms is species-dependent, and extraintestinal manifestations are due to larval migration (e.g., pulmonary infiltrates, eosinophilic meningitis, or painful, pruritic subcutaneous swellings, and peripheral blood eosinophilia).","definition_xrefs":["NCIT:C128395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gnathomiasis","secondary_identifiers":["ICD9:128.1","DOID:11379","MESH:D058429","SCTID:44086001","EFO:0007289","ICD10CM:B83.1","UMLS:C0018013","MEDGEN:6651"],"synonyms":[{"name":"Gnathostoma infection","type":"related"},{"name":"Gnathostomiasis","type":"exact"},{"name":"infectious disease by Gnathostoma","type":"exact"}],"termid":"MONDO:0005776","xrefs":{"Monarch":{"xref_id":"0005776"}}}


id: MONDO:0003816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the articular cartilage of joint.","direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"articular cartilage disorder","secondary_identifiers":["DOID:6227","ICD9:718.00","ICD9:718.02","ICD9:718.0","MEDGEN:510440","SCTID:53417006","UMLS:C0158073"],"synonyms":[{"name":"articular cartilage disorder","type":"exact"},{"name":"articular cartilage disorder involving ankle and foot","type":"narrow"},{"name":"articular cartilage disorder involving forearm","type":"narrow"},{"name":"articular cartilage disorder involving hand","type":"narrow"},{"name":"articular cartilage disorder involving multiple sites","type":"narrow"},{"name":"articular cartilage disorder involving pelvic region and thigh","type":"narrow"},{"name":"articular cartilage disorder involving shoulder region","type":"narrow"},{"name":"articular cartilage disorder involving upper arm","type":"narrow"},{"name":"articular cartilage disorder of ankle and/or foot","type":"narrow"},{"name":"articular cartilage disorder of forearm","type":"narrow"},{"name":"articular cartilage disorder of hand","type":"narrow"},{"name":"articular cartilage disorder of multiple sites","type":"narrow"},{"name":"articular cartilage disorder of shoulder region","type":"narrow"},{"name":"articular cartilage disorder of the pelvic region and thigh","type":"narrow"},{"name":"articular cartilage disorder of upper arm","type":"narrow"},{"name":"articular cartilage of joint disease","type":"exact"},{"name":"articular cartilage of joint disease or disorder","type":"exact"},{"name":"disease of articular cartilage of joint","type":"exact"},{"name":"disease or disorder of articular cartilage of joint","type":"exact"},{"name":"disorder of articular cartilage","type":"related"},{"name":"disorder of articular cartilage of joint","type":"exact"}],"termid":"MONDO:0003816","xrefs":{"Monarch":{"xref_id":"0003816"}}}


id: PBO:0045143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAAF11 pseudogene 1","termid":"PBO:0045143"}


id: PBO:0036212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0036212"}


id: GO:0043385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mycotoxin, any poisonous substance produced by a fungus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"mycotoxin metabolic process","synonyms":[{"name":"mycotoxin metabolism","type":"exact"}],"termid":"GO:0043385"}


id: GO:0016012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex.","definition_xrefs":["PMID:15117830","PMID:16710609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystroglycan complex","termid":"GO:0016011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"sarcoglycan complex","synonyms":[{"name":"sarcoglycan-sarcospan complex","type":"exact"}],"termid":"GO:0016012"}


id: MONDO:0100572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any overgrowth syndrome in which the cause of the disease is a pathogenic gain-of-function variants in the MTOR gene. The variants can be germline or somatic.","definition_xrefs":["PMID:27860216","PMID:35163267","PMID:33833411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTOR-related overgrowth spectrum","termid":"MONDO:0100572","xrefs":{"Monarch":{"xref_id":"0100572"}}}


id: PBO:0045474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally regulated GTP binding protein 2","termid":"PBO:0045474"}


id: PBO:0054680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2088","termid":"PBO:0054680"}


id: FYPO:0003541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to spindle pole body","termid":"FYPO:0001836"},{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body","synonyms":[{"name":"normal protein localisation to meiotic spindle pole body","type":"exact"},{"name":"normal protein localization to meiotic SPB","type":"exact"}],"termid":"FYPO:0003541"}


id: PBO:0081371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 209, pseudogene","termid":"PBO:0081371"}


id: PBO:0031253
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_cytokinesis","termid":"PBO:0031253"}


id: GO:0072697
data:
  {"annotated_genes":["SJAG_04703","SJAG_01196","SJAG_00333","SJAG_03602","SJAG_02228","SJAG_03915","SJAG_00596","SJAG_02831","SJAG_00279","SJAG_04947","SJAG_04597","SJAG_04461","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94169],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[98187],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120047"},{"annotations":[106919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044379"},{"annotations":[115922,113789,91059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990896"},{"annotations":[99849,104288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903360"},{"annotations":[105119,90902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071574"},{"annotations":[92091,118382,110552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the cell cortex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_01196":null,"SJAG_02228":null,"SJAG_02831":null,"SJAG_03011":null,"SJAG_03602":null,"SJAG_03915":null,"SJAG_04461":null,"SJAG_04597":null,"SJAG_04703":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cell cortex","type":"exact"}],"termid":"GO:0072697","terms_by_termid":{"GO:0044379":null,"GO:0071574":null,"GO:0120047":null,"GO:0140325":null,"GO:1903360":null,"GO:1904498":null,"GO:1990896":null}}


id: FYPO:0006647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-3' DNA/RNA helicase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal 5'-3' DNA/RNA helicase activity","termid":"FYPO:0006647"}


id: PBO:0004331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"verprolin","termid":"PBO:0004331"}


id: MOD:00047
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-phospho-L-threonine.","definition_xrefs":["ChEBI:21967","PubMed:7678926","RESID:AA0038","Unimod:21#T","DeltaMass:0","PubMed:12923550","OMSSA:7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 181.00-181.02 Da","termid":"MOD:00773"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"O-phosphorylated residue","termid":"MOD:01455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phospho-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(phosphonooxy)butanoic acid","type":"exact"},{"name":"2-amino-3-hydroxybutanoic acid 3-phosphate","type":"exact"},{"name":"2-azanyl-3-(phosphonooxy)butanoic acid","type":"exact"},{"name":"MOD_RES Phosphothreonine","type":"exact"},{"name":"O-phospho-L-threonine","type":"exact"},{"name":"O-phosphorylated L-threonine","type":"exact"},{"name":"O3-phosphothreonine","type":"exact"},{"name":"OPThr","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phospho Threonyl","type":"exact"},{"name":"Phosphorylation","type":"related"},{"name":"phosphorylationt","type":"exact"},{"name":"threonine phosphate ester","type":"exact"}],"termid":"MOD:00047"}


id: GO:0010540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The unidirectional movement of auxin from the apex to base of an organ, including the shoot, leaf, primary root, or lateral root.","definition_xrefs":["PMID:10677441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin polar transport","termid":"GO:0009926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"basipetal auxin transport","termid":"GO:0010540"}


id: PBO:0109087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 1","termid":"PBO:0109087"}


id: GO:0090400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular senescence process associated with the dismantling of a cell as a response to environmental factors such as hydrogen peroxide or X-rays.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress-induced premature senescence","synonyms":[{"name":"SIPS","type":"exact"}],"termid":"GO:0090400"}


id: MONDO:0000512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ameloblastoma (obsolete MONDO:0000512)","termid":"MONDO:0000512","xrefs":{"Monarch":{"xref_id":"0000512"}}}


id: GO:1903307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GOC:pad","GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:12526776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"positively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of regulated secretory pathway","synonyms":[{"name":"activation of regulated secretory pathway","type":"narrow"},{"name":"up regulation of regulated secretory pathway","type":"exact"},{"name":"up-regulation of regulated secretory pathway","type":"exact"},{"name":"upregulation of regulated secretory pathway","type":"exact"}],"termid":"GO:1903307"}


id: PR:Q9UUG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC926.06c gene.","definition_xrefs":["UniProtKB:Q9UUG2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized leucine-rich repeat-containing protein C926.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.06c","synonyms":[{"name":"Spom972h-SPAC926.06c","type":"exact"}],"termid":"PR:Q9UUG2"}


id: PBO:0067146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 196, pseudogene","termid":"PBO:0067146"}


id: PBO:0060026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 14","termid":"PBO:0060026"}


id: PBO:0069818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1104, pseudogene","termid":"PBO:0069818"}


id: GO:0000973
data:
  {"annotated_genes":["SJAG_03299","SJAG_00298","SJAG_04347","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69575,70156,74060,75273],"is_not":false,"summary":null,"term":"GO:0000973"}]},"cv_name":"biological_process","definition":"The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery even after transcription has been repressed.","definition_xrefs":["PMID:18614049","GOC:krc","PMID:17373856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery","termid":"GO:0000972"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00298":null,"SJAG_03299":null,"SJAG_04148":null,"SJAG_04347":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery","type":"exact"}],"termid":"GO:0000973","terms_by_termid":{"GO:0000973":null}}


id: MONDO:0014376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder with microcephaly and with or without ocular malformations or hypogonadotropic hypogonadism","secondary_identifiers":["MEDGEN:862965","DOID:0070057","OMIM:615866","GARD:16023","UMLS:C4014528"],"synonyms":[{"name":"CSS9","type":"exact"},{"name":"Coffin-Siris syndrome 9","type":"exact"},{"name":"MRD27","type":"exact"},{"name":"autosomal dominant intellectual disability 27","type":"exact"},{"name":"autosomal dominant mental retardation 27","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 27","type":"related"},{"name":"intellectual disability, autosomal dominant 27","type":"exact"},{"name":"intellectual disability, autosomal dominant type 27","type":"exact"},{"name":"mental retardation, autosomal dominant 27","type":"related"},{"name":"mental retardation, autosomal dominant type 27","type":"exact"}],"termid":"MONDO:0014376","xrefs":{"Monarch":{"xref_id":"0014376"}}}


id: PBO:0012573
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Partner of DeCapping enzyme","termid":"PBO:0012573"}


id: MONDO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute bacterial infection that affects the esophagus. Symptoms include severe pain on swallowing and retrosternal pain. Endoscopic examination reveals esophageal mucosal ulcerations and pseudomembranous formations.","definition_xrefs":["NCIT:C27106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"bacterial esophagitis","secondary_identifiers":["MEDGEN:83319","DOID:13921","UMLS:C0341108","SCTID:235601001"],"synonyms":[{"name":"bacterial esophagitis","type":"exact"}],"termid":"MONDO:0001832","xrefs":{"Monarch":{"xref_id":"0001832"}}}


id: PBO:0071149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 13","termid":"PBO:0071149"}


id: PBO:0053477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 448","termid":"PBO:0053477"}


id: MONDO:0014545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive myoclonic epilepsy in which the cause of the disease is a mutation in the CERS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005027"],"is_obsolete":false,"name":"progressive myoclonic epilepsy type 8","secondary_identifiers":["DOID:0111451","OMIM:616230","Orphanet:424027","MEDGEN:1680582","GARD:17706","UMLS:C5190825"],"synonyms":[{"name":"CERS1 progressive myoclonic epilepsy","type":"exact"},{"name":"EPM8","type":"exact"},{"name":"PME type 8","type":"exact"},{"name":"epilepsy, progressive myoclonic, 8","type":"related"},{"name":"epilepsy, progressive myoclonic, type 8","type":"exact"},{"name":"progressive myoclonic epilepsy caused by mutation in CERS1","type":"exact"},{"name":"progressive myoclonic epilepsy due to CERS1 deficiency","type":"exact"},{"name":"progressive myoclonus epilepsy type 8","type":"exact"}],"termid":"MONDO:0014545","xrefs":{"Monarch":{"xref_id":"0014545"}}}


id: GO:0047526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: vestitone + NADP+ = 2'-hydroxyformononetin + NADPH + H+.","definition_xrefs":["RHEA:22560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2'-hydroxyisoflavone reductase activity","secondary_identifiers":["MetaCyc:RXN-3562","EC:1.3.1.45"],"synonyms":[{"name":"2',7-dihydroxy-4',5'-methylenedioxyisoflavone reductase activity","type":"related"},{"name":"NADPH:2'-hydroxyisoflavone oxidoreductase activity","type":"related"},{"name":"isoflavone reductase activity","type":"related"},{"name":"vestitone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047526"}


id: MONDO:0016070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary gingival fibromatosis (HGF) is a rare benign, slowly progressive, non-inflammatory fibrous hyperplasia of the maxillary and mandibular gingivae that generally occurs with the eruption of the permanent (or more rarely the primary) dentition or even at birth. It presents as a localized or generalized, smooth or nodular overgrowth of the gingival tissues of varying severity. It can be isolated, with autosomal dominant inheritance, or as part of a syndrome.","definition_xrefs":["Orphanet:2024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival overgrowth","termid":"MONDO:0002507"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary gingival fibromatosis","secondary_identifiers":["SCTID:109620006","icd11.foundation:1911315646","OMIMPS:135300","DOID:0060466","GARD:16582","MEDGEN:140775","UMLS:C0399440"],"synonyms":[{"name":"autosomal dominant gingival fibromatosis","type":"exact"},{"name":"autosomal dominant gingival hyperplasia","type":"exact"},{"name":"hereditary gingival fibromatosis","type":"exact"},{"name":"hereditary gingival hyperplasia","type":"exact"}],"termid":"MONDO:0016070","xrefs":{"Monarch":{"xref_id":"0016070"}}}


id: MONDO:0014442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Bardet-Biedl syndrome that has material basis in homozygous mutation in the CEP290 gene on chromosome 12q21.","definition_xrefs":["DOID:0110136","PMID:18327255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"CEP290-related ciliopathy","termid":"MONDO:0100451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 14","secondary_identifiers":["GARD:16038","MEDGEN:393033","OMIM:615991","MESH:C567141","UMLS:C2673874"],"synonyms":[{"name":"BBS14","type":"exact"},{"name":"Bardet-Biedl syndrome 14","type":"exact"},{"name":"Bardet-Biedl syndrome 14, modifier of","type":"exact"},{"name":"Bardet-Biedl syndrome type 14","type":"exact"}],"termid":"MONDO:0014442","xrefs":{"Monarch":{"xref_id":"0014442"}}}


id: MONDO:0044675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRP5-related primary osteoporosis","secondary_identifiers":["Orphanet:498481","GARD:22031","MEDGEN:1798664","UMLS:C5567241"],"termid":"MONDO:0044675","xrefs":{"Monarch":{"xref_id":"0044675"}}}


id: PBO:0040606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 4","termid":"PBO:0040606"}


id: MONDO:0005605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm composed of transitional cells which show preservation of the nuclear polarity.","definition_xrefs":["NCIT:C4115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transitional cell papilloma","secondary_identifiers":["EFO:0006497","UMLS:C0334266","ICDO:8120/0","DOID:2670","MEDGEN:137734"],"synonyms":[{"name":"papilloma, transitional cell, benign","type":"exact"},{"name":"transitional cell papilloma","type":"exact"},{"name":"transitional cell papilloma NOS (morphologic abnormality)","type":"exact"},{"name":"transitional cell papilloma, benign","type":"exact"},{"name":"transitional cell papilloma, benign (morphologic abnormality)","type":"exact"},{"name":"transitional papilloma","type":"exact"}],"termid":"MONDO:0005605","xrefs":{"Monarch":{"xref_id":"0005605"}}}


id: MONDO:0026180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic congenital limb malformation (obsolete MONDO:0026180)","secondary_identifiers":["Orphanet:183536"],"termid":"MONDO:0026180","xrefs":{"Monarch":{"xref_id":"0026180"}}}


id: MONDO:0010234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete body length, mouse, human homolog (obsolete MONDO:0010234)","synonyms":[{"name":"body length, mouse, HUMAN homolog","type":"related"}],"termid":"MONDO:0010234","xrefs":{"Monarch":{"xref_id":"0010234"}}}


id: FYPO:0004468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell tip during cellular response to salt stress","synonyms":[{"name":"decreased protein localisation to cell tip during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell end during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004468"}


id: GO:0010566
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a ketone, carried out by individual cells.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of ketone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010566","terms_by_termid":{"GO:1904775":null}}


id: FYPO:0007426
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of the newly assembled spindle pole body into the nuclear envelope does not occur.","definition_xrefs":["PMID:19487457","PMID:22042620","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000631"],"is_obsolete":false,"name":"abolished new mitotic spindle pole body insertion into nuclear envelope","synonyms":[{"name":"abnormal establishment of old mitotic spindle pole body localization to nuclear envelope","type":"exact"},{"name":"abolished new mitotic SPB insertion into nuclear envelope","type":"exact"},{"name":"abolished new mitotic spindle pole body insertion into nuclear envelope during mitotic cell cycle","type":"related"},{"name":"abolished new mitotic spindle pole body insertion into nuclear envelope during vegetative growth","type":"exact"}],"termid":"FYPO:0007426"}


id: GO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a lymphocyte.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte mediated immunity","synonyms":[{"name":"cell-mediated immunity","type":"broad"},{"name":"cellular immune response","type":"broad"}],"termid":"GO:0002449"}


id: PBO:0043634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit gamma 1","termid":"PBO:0043634"}


id: PBO:0074966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-8","termid":"PBO:0074966"}


id: PBO:0080749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X antigen family member 5","termid":"PBO:0080749"}


id: PBO:0028129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_trapoxin_A","termid":"PBO:0028129"}


id: PBO:0077485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 204","termid":"PBO:0077485"}


id: MONDO:1012936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any persistent truncus arteriosus that occurs in cattle due to a mutation in the GATA6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus, cattle","termid":"MONDO:1010475"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus, GATA6-related, cattle","secondary_identifiers":["OMIA:002559-9913"],"termid":"MONDO:1012936","xrefs":{"Monarch":{"xref_id":"1012936"}}}


id: GO:0043774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coenzyme F420-2 + L-glutamate + GTP = coenzyme F420-3 + GDP + orthophosphate.","definition_xrefs":["PMID:12909715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"coenzyme F420-2 alpha-glutamyl ligase activity","secondary_identifiers":["RHEA:42332","EC:6.3.2.32"],"synonyms":[{"name":"F420-2 alpha-glutamyl ligase activity","type":"exact"}],"termid":"GO:0043774"}


id: GO:1905710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the passage or uptake of molecules by a membrane.","definition_xrefs":["PMID:27482894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane permeability","termid":"GO:1905710"}


id: GO:1902873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of horizontal cell localization.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of horizontal cell localization","termid":"GO:1902872"},{"relation_name":"negatively_regulates","term_name":"horizontal cell localization","termid":"GO:0035852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of horizontal cell localization","synonyms":[{"name":"down regulation of horizontal cell localisation","type":"exact"},{"name":"down regulation of horizontal cell localization","type":"exact"},{"name":"down regulation of horizontal cell positioning","type":"exact"},{"name":"down regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"down regulation of retinal horizontal cell positioning","type":"exact"},{"name":"down-regulation of horizontal cell localisation","type":"exact"},{"name":"down-regulation of horizontal cell localization","type":"exact"},{"name":"down-regulation of horizontal cell positioning","type":"exact"},{"name":"down-regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"down-regulation of retinal horizontal cell positioning","type":"exact"},{"name":"downregulation of horizontal cell localisation","type":"exact"},{"name":"downregulation of horizontal cell localization","type":"exact"},{"name":"downregulation of horizontal cell positioning","type":"exact"},{"name":"downregulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"downregulation of retinal horizontal cell positioning","type":"exact"},{"name":"inhibition of horizontal cell localisation","type":"narrow"},{"name":"inhibition of horizontal cell localization","type":"narrow"},{"name":"inhibition of horizontal cell positioning","type":"narrow"},{"name":"inhibition of laminar positioning of retinal horizontal cell","type":"narrow"},{"name":"inhibition of retinal horizontal cell positioning","type":"narrow"},{"name":"negative regulation of horizontal cell localisation","type":"exact"},{"name":"negative regulation of horizontal cell positioning","type":"exact"},{"name":"negative regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"negative regulation of retinal horizontal cell positioning","type":"exact"}],"termid":"GO:1902873"}


id: GO:0030537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior in a larval form of an organism, an immature organism that must undergo metamorphosis to assume adult characteristics.","definition_xrefs":["ISBN:0877797099","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval behavior","secondary_identifiers":["GO:0017037"],"synonyms":[{"name":"larval behaviour","type":"exact"}],"termid":"GO:0030537"}


id: MONDO:0015940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of rheumatologic disorder that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare rheumatologic disease (obsolete MONDO:0015940)","secondary_identifiers":["Orphanet:182231"],"synonyms":[{"name":"rare rheumatologic disorder","type":"exact"},{"name":"rare rheumatological disease","type":"exact"}],"termid":"MONDO:0015940","xrefs":{"Monarch":{"xref_id":"0015940"}}}


id: GO:1905667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to endosome.","definition_xrefs":["PMID:22732145","GOC:bc","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to endosome","termid":"GO:1905666"},{"relation_name":"negatively_regulates","term_name":"protein localization to endosome","termid":"GO:0036010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to endosome","synonyms":[{"name":"down regulation of protein localisation in endosome","type":"exact"},{"name":"down regulation of protein localization in endosome","type":"exact"},{"name":"down regulation of protein localization to endosome","type":"exact"},{"name":"down-regulation of protein localisation in endosome","type":"exact"},{"name":"down-regulation of protein localization in endosome","type":"exact"},{"name":"down-regulation of protein localization to endosome","type":"exact"},{"name":"downregulation of protein localisation in endosome","type":"exact"},{"name":"downregulation of protein localization in endosome","type":"exact"},{"name":"downregulation of protein localization to endosome","type":"exact"},{"name":"inhibition of protein localisation in endosome","type":"narrow"},{"name":"inhibition of protein localization in endosome","type":"narrow"},{"name":"inhibition of protein localization to endosome","type":"narrow"},{"name":"negative regulation of protein localisation in endosome","type":"exact"},{"name":"negative regulation of protein localization in endosome","type":"exact"}],"termid":"GO:1905667"}


id: MONDO:0016944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 7p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 7. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 7p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 7","termid":"MONDO:0016928"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 7","secondary_identifiers":["MEDGEN:162875","Orphanet:262749","GARD:5355","UMLS:C0795820","icd11.foundation:79901143","MESH:C537819"],"synonyms":[{"name":"7p duplication","type":"related"},{"name":"7p trisomy","type":"related"},{"name":"Duplication 7p","type":"related"},{"name":"chromosome 7p duplication","type":"related"},{"name":"partial duplication of chromosome 7p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 7","type":"exact"},{"name":"partial trisomy 7p","type":"related"},{"name":"partial trisomy of chromosome 7p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 7","type":"exact"},{"name":"trisomy 7p","type":"related"}],"termid":"MONDO:0016944","xrefs":{"Monarch":{"xref_id":"0016944"}}}


id: GO:0008743
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine + NAD+ = L-2-amino-3-oxobutanoate + CO2 + NADH.","definition_xrefs":["RHEA:13161","EC:1.1.1.103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-threonine 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:THREODEHYD-RXN","KEGG_REACTION:R01465","Reactome:R-HSA-6798667"],"synonyms":[{"name":"L-threonine dehydrogenase activity","type":"related"},{"name":"L-threonine:NAD+ oxidoreductase activity","type":"related"},{"name":"threonine 3-dehydrogenase activity","type":"broad"},{"name":"threonine dehydrogenase activity","type":"related"}],"termid":"GO:0008743"}


id: MONDO:0010144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tibial hemimelia is a rare congenital anomaly characterized by deficiency of the tibia with a relatively intact fibula.","definition_xrefs":["Orphanet:93322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemimelia","termid":"MONDO:0016240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibial hemimelia","secondary_identifiers":["GARD:8707","MESH:C535563","OMIM:275220","UMLS:C0265633","SCTID:79177001","MEDGEN:120551","icd11.foundation:1111258427"],"synonyms":[{"name":"Thm","type":"related"},{"name":"absence of tibia","type":"related"},{"name":"bilateral absence of the tibia","type":"related"},{"name":"congenital absence of tibia","type":"exact"},{"name":"congenital aplasia and dysplasia of the tibia with intact fibula","type":"exact"},{"name":"congenital longitudinal deficiency of the tibia","type":"exact"},{"name":"tibia, absence of","type":"related"},{"name":"tibial hemimelia","type":"exact"},{"name":"tibial longitudinal meromelia","type":"exact"}],"termid":"MONDO:0010144","xrefs":{"Monarch":{"xref_id":"0010144"}}}


id: PBO:0059571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1 pseudogene 3","termid":"PBO:0059571"}


id: PBO:0029343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_tRNA_3'-end_processing","termid":"PBO:0029343"}


id: PBO:0053273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A6","termid":"PBO:0053273"}


id: GO:0033119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of RNA splicing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of RNA splicing","termid":"GO:0043484"},{"relation_name":"negatively_regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of RNA splicing","termid":"GO:0033119"}


id: PBO:0060187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC5B antisense RNA 1","termid":"PBO:0060187"}


id: GO:0097566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of four basal bodies found in Giardia species (trophozoite stage). It comprises the left lateral basal body pair and the left middle basal body pair (i.e. the anterior, ventral, caudal and posteriolateral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally).","definition_xrefs":["GOC:giardia","PMID:16607022","PMID:5961344","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left tetrad","termid":"GO:0097566"}


id: PBO:0043049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and histidine rich domain containing 2, pseudogene","termid":"PBO:0043049"}


id: PBO:0062045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 32 pseudogene","termid":"PBO:0062045"}


id: PBO:0001712
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.35","termid":"PBO:0001712"}


id: GO:1905598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of low-density lipoprotein receptor activity.","definition_xrefs":["GOC:nc","PMID:22848640","GOC:BHF","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of molecular function","termid":"GO:0044092"},{"relation_name":"is_a","term_name":"negative regulation of receptor-mediated endocytosis","termid":"GO:0048261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of low-density lipoprotein receptor activity","synonyms":[{"name":"down regulation of LDL receptor","type":"exact"},{"name":"down regulation of LDLR activity","type":"exact"},{"name":"down regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"down-regulation of LDL receptor","type":"exact"},{"name":"down-regulation of LDLR activity","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"downregulation of LDL receptor","type":"exact"},{"name":"downregulation of LDLR activity","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"inhibition of LDL receptor","type":"narrow"},{"name":"inhibition of LDLR activity","type":"narrow"},{"name":"inhibition of low-density lipoprotein receptor activity","type":"narrow"},{"name":"negative regulation of LDL receptor","type":"exact"},{"name":"negative regulation of LDLR activity","type":"exact"}],"termid":"GO:1905598"}


id: MONDO:0700141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma occurring in a dog. It is the most common malignant tumor found in the mouths of dogs and also occurs frequently on the digits. All canine melanomas are locally invasive and malignant canine melanomas show a high rate of metastasis. Melanoma in dogs has been established as a relevant model for human melanoma.","definition_xrefs":["NCIT:C120298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma, non-human animal","termid":"MONDO:0700132"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine melanoma","termid":"MONDO:0700141","xrefs":{"Monarch":{"xref_id":"0700141"}}}


id: MONDO:1011746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial eczema, non-human animal","secondary_identifiers":["OMIA:001276"],"termid":"MONDO:1011746","xrefs":{"Monarch":{"xref_id":"1011746"}}}


id: PBO:0031692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_transport","termid":"PBO:0031692"}


id: GO:0004529
data:
  {"annotated_genes":["SJAG_05280","SJAG_01163","SJAG_03734","SJAG_04410","SJAG_05373","SJAG_01173","SJAG_02298","SJAG_01832","SJAG_02818","SJAG_01648","SJAG_00377","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75186,74911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[71109,88155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[76700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[88311,72934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[96886,107511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[100901,88314,74001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[96888,72351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a DNA molecule.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"},{"relation_name":"is_a","term_name":"DNA nuclease activity","termid":"GO:0004536"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_02298":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03734":null,"SJAG_04410":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0004527","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0004529","terms_by_termid":{"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null}}


id: GO:0103003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oleate + a lipid hydroperoxide = 9,10-epoxystearate + a lipid alcohol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oleate peroxygenase activity (obsolete GO:0103003)","termid":"GO:0103003"}


id: MONDO:0021348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the testis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular disorder","termid":"MONDO:0002329"},{"relation_name":"is_a","term_name":"male reproductive system neoplasm","termid":"MONDO:0024582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of testis","secondary_identifiers":["MEDGEN:52675","UMLS:C0039590","ICD9:239.5","NCIT:C3404","ONCOTREE:TESTIS","SCTID:126900000"],"synonyms":[{"name":"neoplasm of testis","type":"exact"},{"name":"neoplasm of the testis","type":"exact"},{"name":"testicular neoplasm","type":"exact"},{"name":"testicular tumor","type":"exact"},{"name":"testicular tumour","type":"exact"},{"name":"testis neoplasm","type":"exact"},{"name":"testis neoplasm (disease)","type":"exact"},{"name":"testis tumor","type":"exact"},{"name":"testis tumour","type":"exact"},{"name":"tumor of testis","type":"exact"},{"name":"tumor of the testis","type":"exact"},{"name":"tumour of testis","type":"exact"},{"name":"tumour of the testis","type":"exact"}],"termid":"MONDO:0021348","xrefs":{"Monarch":{"xref_id":"0021348"}}}


id: PBO:0065839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 4","termid":"PBO:0065839"}


id: MONDO:1011334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mouth mucosa disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouth mucosa disorder, non-human animal","termid":"MONDO:1011334","xrefs":{"Monarch":{"xref_id":"1011334"}}}


id: MONDO:0002945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal cell carcinoma of the skin characterized by the presence of small nodules that permeate the dermis. It presents as an elevated or flat infiltrating tumor, usually in the back.","definition_xrefs":["NCIT:C27541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"micronodular basal cell carcinoma","secondary_identifiers":["MEDGEN:234567","SCTID:402529002","DOID:4289","UMLS:C1367861"],"synonyms":[{"name":"skin micronodular basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002945","xrefs":{"Monarch":{"xref_id":"0002945"}}}


id: PBO:0087617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the conserved chromosomal passenger complex (CPC); complex regulates kinetochore-microtubule attachments, activation of the spindle tension checkpoint, and mitotic spindle disassembly; other complex members are Ipl1p, Bir1p, and Nbl1p","termid":"PBO:0087617"}


id: FYPO:0003485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biosynthesis of DNA does not occur.","definition_xrefs":["PomBase:mah","GO:0071897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"abolished DNA synthesis","synonyms":[{"name":"abolished DNA biosynthesis","type":"exact"},{"name":"abolished DNA biosynthetic process","type":"exact"},{"name":"abolished DNA synthesis during mitotic cell cycle","type":"related"},{"name":"abolished DNA synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0003485"}


id: GO:1904868
data:
  {"annotated_genes":["SJAG_04586","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64827,107686],"is_not":false,"summary":null,"term":"GO:1904868"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a telomerase catalytic core complex.","definition_xrefs":["PMID:26586433","GOC:BHF","GO_REF:0000079","GOC:BHF_telomere","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomerase holoenzyme complex assembly","termid":"GO:1905323"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"telomerase catalytic core complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"TERT-TERC complex assembly","type":"related"},{"name":"TERT-TERC complex formation","type":"related"},{"name":"telomerase catalytic core complex formation","type":"exact"}],"termid":"GO:1904868","terms_by_termid":{"GO:1904868":null}}


id: MONDO:0100261
data:
  {"annotated_genes":["SJAG_04763"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013948"},{"annotations":[86651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054549"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0005559","MONDO:0005244","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX3 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX3 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX3 defect","type":"exact"}],"termid":"MONDO:0100261","terms_by_termid":{"MONDO:0013948":null,"MONDO:0054549":null},"xrefs":{"Monarch":{"xref_id":"0100261"}}}


id: FYPO:0004980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the equatorial microtubule organizing center is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000935"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to eMTOC during vegetative growth","synonyms":[{"name":"decreased protein localisation to eMTOC during vegetative growth","type":"exact"},{"name":"decreased protein localization to eMTOC during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to equatorial microtubule organizing center during vegetative growth","type":"exact"},{"name":"decreased protein localization to mitotic eMTOC","type":"related"},{"name":"reduced protein localization to eMTOC during vegetative growth","type":"exact"}],"termid":"FYPO:0004980"}


id: MONDO:0957460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal perforation","termid":"MONDO:0006807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"spontaneous intestinal perforation","secondary_identifiers":["icd11.foundation:1355081169","MEDGEN:856598","UMLS:C3897004","Orphanet:645793"],"termid":"MONDO:0957460","xrefs":{"Monarch":{"xref_id":"0957460"}}}


id: PBO:0036176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_mitosis","termid":"PBO:0036176"}


id: FYPO:0005531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the IRC1L boundary element is decreased.","definition_xrefs":["PomBase:mah","PMID:25972440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at boundary element IRC1L","synonyms":[{"name":"decreased protein localisation to chromatin at boundary element IRC1L","type":"exact"},{"name":"decreased protein localization to centromeric boundary element IRC1L","type":"exact"},{"name":"decreased protein localization to chromatin at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at boundary element IRC1L during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at boundary element IRC1L","type":"exact"}],"termid":"FYPO:0005531"}


id: GO:0061378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the corpora quadrigemina over time, from its formation to the mature structure. The corpora quadrigemina is a part of the midbrain that is made up of the superior and inferior colliculi.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corpora quadrigemina development","termid":"GO:0061378"}


id: GO:0014812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a muscle cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["CL:0000187","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell migration","termid":"GO:0014812"}


id: PBO:0054836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2250","termid":"PBO:0054836"}


id: PBO:0057156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302b","termid":"PBO:0057156"}


id: MONDO:0044627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute macular neuroretinopathy","secondary_identifiers":["Orphanet:488239","MEDGEN:1678428","GARD:22000","icd11.foundation:1081365759","UMLS:C5200735"],"synonyms":[{"name":"AMNR","type":"exact"}],"termid":"MONDO:0044627","xrefs":{"Monarch":{"xref_id":"0044627"}}}


id: GO:0050905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process pertaining to the functions of the nervous and muscular systems of an organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular process","synonyms":[{"name":"neuromotor process","type":"exact"},{"name":"neuromuscular physiological process","type":"exact"}],"termid":"GO:0050905"}


id: PBO:0006194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_regulation_by","termid":"PBO:0006194"}


id: MONDO:1010930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotubular myopathy 1 that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotubular myopathy 1, non-human animal","termid":"MONDO:1010202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubular myopathy 1, domestic cat","secondary_identifiers":["OMIA:001508-9685"],"termid":"MONDO:1010930","xrefs":{"Monarch":{"xref_id":"1010930"}}}


id: GO:0044541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the proteolytic processing of an inactive enzyme to an active form in another organism.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete zymogen activation in another organism (obsolete GO:0044541)","synonyms":[{"name":"zymogen activation in other organism","type":"exact"}],"termid":"GO:0044541"}


id: PBO:0065746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase 1","termid":"PBO:0065746"}


id: FYPO:0001665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is lower than normal during a cellular response to glucose stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular cAMP level","termid":"FYPO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular cAMP level during cellular response to glucose stimulus","synonyms":[{"name":"decreased cAMP accumulation during cellular response to glucose stimulus","type":"related"},{"name":"decreased cellular cAMP level in response to glucose stimulus","type":"exact"},{"name":"decreased cellular cyclic AMP level during cellular response to glucose stimulus","type":"exact"},{"name":"reduced cellular cAMP level during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0001665"}


id: PBO:0039426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 6","termid":"PBO:0039426"}


id: FYPO:0000079
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118891,118906],"is_not":false,"summary":null,"term":"FYPO:0000079"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to caspofungin. Cells stop growing (and may die) at a concentration of caspofungin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to echinocandin","termid":"FYPO:0007947"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to caspofungin","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["pmk1delta","pck2delta"],"synonyms":[{"name":"hypersensitive to caspofungin","type":"exact"},{"name":"sensitive to caspofungin during mitotic cell cycle","type":"related"},{"name":"sensitive to caspofungin during vegetative growth","type":"exact"},{"name":"sensitive to glucan synthase inhibitor","type":"broad"}],"termid":"FYPO:0000079","terms_by_termid":{"FYPO:0000079":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PR:O94429
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor G 2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-releasing factor 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.10","secondary_identifiers":["UniProtKB:O94429"],"synonyms":[{"name":"EF-G2mt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RRF2mt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GFM2","type":"exact"},{"name":"elongation factor G 2, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mEF-G 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94429"}


id: MONDO:0045052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing bone-forming neoplasm. This category includes osteoma, osteoid osteoma, and osteoblastoma.","definition_xrefs":["NCIT:C6602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"osteogenic neoplasm","termid":"MONDO:0045053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign osteogenic neoplasm","secondary_identifiers":["MEDGEN:231943","UMLS:C1332523"],"synonyms":[{"name":"benign osseous neoplasm","type":"related"},{"name":"benign osseous tumor","type":"related"},{"name":"benign osseous tumour","type":"related"},{"name":"benign osteogenic neoplasm","type":"exact"},{"name":"benign osteogenic tumor","type":"exact"},{"name":"benign osteogenic tumour","type":"exact"},{"name":"osteogenic neoplasm, benign","type":"exact"}],"termid":"MONDO:0045052","xrefs":{"Monarch":{"xref_id":"0045052"}}}


id: GO:2001168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2B ubiquitination.","definition_xrefs":["PMID:12876293"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2B ubiquitination (obsolete GO:2001168)","termid":"GO:2001168"}


