# terms

id: MONDO:0009452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare and severe congenital multisystem disorder characterized by the principal features of agenesis of the corpus callosum, cataracts, oculocutaneous hypopigmentation, cardiomyopathy and combined immunodeficiency.","definition_xrefs":["Orphanet:1493"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"Vici syndrome","secondary_identifiers":["SCTID:719824001","UMLS:C1855772","DOID:0060356","MESH:C535566","GARD:448","MEDGEN:340962","OMIM:242840","NCIT:C138174"],"synonyms":[{"name":"Dionisi Vici Sabetta Gambarara syndrome","type":"related"},{"name":"Dionisi-Vici-Sabetta-Gambarara syndrome","type":"exact"},{"name":"VICIS","type":"related"},{"name":"Vici syndrome","type":"exact"},{"name":"absent corpus callosum cataract immunodeficiency","type":"related"},{"name":"absent corpus callosum-cataract-immunodeficiency syndrome","type":"exact"},{"name":"corpus callosum agenesis-cataract-immunodeficiency syndrome","type":"exact"},{"name":"immunodeficiency with cleft Lip/palate, cataract, hypopigmentation, and absent corpus callosum","type":"related"},{"name":"immunodeficiency with cleft lip/palate, cataract, hypopigmentation and absent corpus callosum","type":"related"},{"name":"immunodeficiency with cleft lip/palate, cataract, hypopigmentation, and absent corpus callosum","type":"exact"}],"termid":"MONDO:0009452","xrefs":{"Monarch":{"xref_id":"0009452"}}}


id: PBO:0089058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMP70 family endosomal transport protein/Nonaspanin-like","termid":"PBO:0089058"}


id: GO:0004512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose 6-phosphate = 1D-myo-inositol 3-phosphate. This reaction requires NAD, which dehydrogenates the CHOH group to CO at C-5 of the glucose 6-phosphate, making C-6 into an active methylene, able to condense with the aldehyde at C-1. Finally, the enzyme-bound NADH reconverts C-5 into the CHOH form.","definition_xrefs":["RHEA:10716","EC:5.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"inositol-3-phosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R07324","MetaCyc:MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN","Reactome:R-HSA-1855178"],"synonyms":[{"name":"1L-myo-inositol-1-phosphate lyase (isomerizing)","type":"related"},{"name":"D-glucose 6-phosphate cycloaldolase activity","type":"related"},{"name":"glucocycloaldolase activity","type":"related"},{"name":"glucose 6-phosphate cyclase activity","type":"related"},{"name":"glucose-6-phosphate inositol monophosphate cycloaldolase activity","type":"related"},{"name":"inositol 1-phosphate synthatase activity","type":"related"},{"name":"inositol 1-phosphate synthetase activity","type":"related"}],"termid":"GO:0004512"}


id: GO:1903201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of oxidative stress-induced cell death.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oxidative stress-induced cell death (obsolete GO:1903201)","synonyms":[{"name":"regulation of cell death in response to oxidative stress","type":"exact"}],"termid":"GO:1903201"}


id: PBO:0091724
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by D. melanogaster CDC2","termid":"PBO:0091724"}


id: PBO:0004661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIRA interacting protein Hip3","termid":"PBO:0004661"}


id: PBO:0083605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential RPL28 gene encoding a large subunit ribosomal protein","termid":"PBO:0083605"}


id: MONDO:0017852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurologic disorder characterized by profound developmental delay, facial dysmorphism (i.e. microcephaly, large anterior fontanel, hypertelorism, downslanting palpebral fissures, beaked nose, micrognathia), broad thumbs and flexion and/or extension spasms. Bilateral cataracts, hypertrophic cardiomyopathy and hydrocele have also been reported. EEG shows hypsarrhythmic features and MRI may reveal partial agenesis of the corpus callosum, mild brain atrophy and/or ventriculomegaly. There have been no further descriptions in the literature since 1990.","definition_xrefs":["Orphanet:3173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"infantile spasms-broad thumbs syndrome","secondary_identifiers":["UMLS:C4749287","GARD:3002","MEDGEN:1667345"],"synonyms":[{"name":"Tsao Ellingson syndrome","type":"related"},{"name":"Tsao-Ellingson syndrome","type":"exact"},{"name":"infantile spasms broad thumbs","type":"related"}],"termid":"MONDO:0017852","xrefs":{"Monarch":{"xref_id":"0017852"}}}


id: GO:0032908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of transforming growth factor-beta1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"regulates","term_name":"transforming growth factor beta1 production","termid":"GO:0032905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of transforming growth factor beta1 production","synonyms":[{"name":"regulation of TGF-B1 production","type":"exact"},{"name":"regulation of TGFB1 production","type":"exact"},{"name":"regulation of transforming growth factor-beta1 production","type":"exact"}],"termid":"GO:0032908"}


id: MONDO:0019274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other epidermal disorder (obsolete MONDO:0019274)","secondary_identifiers":["Orphanet:79359"],"termid":"MONDO:0019274","xrefs":{"Monarch":{"xref_id":"0019274"}}}


id: MONDO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete major affective disorder (obsolete MONDO:0000055)","termid":"MONDO:0000055","xrefs":{"Monarch":{"xref_id":"0000055"}}}


id: PBO:0082332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase subunit of imitation-switch (ISWI) class chromatin remodelers; with Ioc3p forms Isw1a complex involved in repression of transcription initiation; with Ioc2p and Ioc4p forms Isw1b complex involved in regulation of transcription elongation; Isw1b recruited to ORFs by H3K36 methylation and acts with Chd1p to prevent trans-histone exchange over coding regions; Isw1p import into nucleus depends on C-terminal bipartite nuclear targeting signal KRIR X19 KKAK","termid":"PBO:0082332"}


id: GO:0034921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-4,5-dihydroxy-4,5-dihydropyrene = 4,5-dihydroxypyrene + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-4,5-dihydroxy-4,5-dihydropyrene dehydrogenase activity (obsolete GO:0034921)","termid":"GO:0034921"}


id: MONDO:0006552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the hair follicles. Causes include excessive perspiration, skin infections, and skin wounds.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"folliculitis","secondary_identifiers":["EFO:1000702","MEDGEN:4752","ICD9:704.8","Wikipedia:Folliculitis","NCIT:C94408","MESH:D005499","SCTID:13600006","DOID:4409","UMLS:C0016436"],"synonyms":[{"name":"dermatitis of hair follicle","type":"exact"},{"name":"hair follicle dermatitis","type":"exact"}],"termid":"MONDO:0006552","xrefs":{"Monarch":{"xref_id":"0006552"}}}


id: PBO:0078745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 9B (putative)","termid":"PBO:0078745"}


id: MONDO:0013356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vesicoureteral reflux in which the cause of the disease is a mutation in the SOX17 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial vesicoureteral reflux","termid":"MONDO:0017329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicoureteral reflux 3","secondary_identifiers":["OMIM:613674","UMLS:C3150927","GARD:18420","MEDGEN:462277"],"synonyms":[{"name":"SOX17 vesicoureteral reflux (disease)","type":"exact"},{"name":"VUR3","type":"related"},{"name":"vesicoureteral reflux (disease) caused by mutation in SOX17","type":"exact"},{"name":"vesicoureteral reflux 3","type":"exact"},{"name":"vesicoureteral reflux type 3","type":"exact"}],"termid":"MONDO:0013356","xrefs":{"Monarch":{"xref_id":"0013356"}}}


id: PR:O94442
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic Fe-S cluster assembly factor NUBP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23264:SF8","PRO:DNx","OMA:SCHPO01886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic Fe-S cluster assembly factor nbp35 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.08","secondary_identifiers":["UniProtKB:O94442"],"synonyms":[{"name":"Spom972h-NUBP1","type":"exact"},{"name":"nucleotide-binding protein 35 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94442"}


id: GO:0140360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cyclic-GMP-AMP from one side of a membrane to the other.","definition_xrefs":["PMID:31126740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"cyclic-GMP-AMP transmembrane transporter activity","termid":"GO:0140360"}


id: MOD:00728
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a galactose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"galactosylated","synonyms":[{"name":"Gal","type":"exact"}],"termid":"MOD:00728"}


id: PBO:0088100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uracil phosphoribosyltransferase; synthesizes UMP from uracil; involved in the pyrimidine salvage pathway","termid":"PBO:0088100"}


id: GO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal execution of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction. For example, some viruses are able to activate host autophagy as a cellular survival mechanism, hence delaying or inhibiting apoptosis.","definition_xrefs":["GOC:bf","VZ:846","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host autophagy","termid":"GO:0075071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host autophagy","secondary_identifiers":["GO:0075044"],"synonyms":[{"name":"activation of host autophagy by virus","type":"exact"},{"name":"autophagy of host cells involved in interaction with symbiont","type":"related"},{"name":"induction by virus of host autophagy","type":"narrow"},{"name":"positive regulation by virus of host autophagy","type":"broad"}],"termid":"GO:0039520"}


id: PBO:0116654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2 binding protein pseudogene 9","termid":"PBO:0116654"}


id: PBO:0080545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 4","termid":"PBO:0080545"}


id: PBO:0113021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of fatty acid synthetase; complex catalyzes the synthesis of long-chain saturated fatty acids; contains acetyltransacylase, dehydratase, enoyl reductase, malonyl transacylase, and palmitoyl transacylase activities; specific target of the broad-spectrum antifungal NPD6433","termid":"PBO:0113021"}


id: GO:0050074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + malate + CoA = ADP + phosphate + malyl-CoA.","definition_xrefs":["EC:6.2.1.9","MetaCyc:MALATE--COA-LIGASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"malate-CoA ligase activity","secondary_identifiers":["RHEA:26193"],"synonyms":[{"name":"malate thiokinase activity","type":"related"},{"name":"malate:CoA ligase (ADP-forming)","type":"related"},{"name":"malyl coenzyme A synthetase activity","type":"related"},{"name":"malyl-CoA synthetase activity","type":"related"}],"termid":"GO:0050074"}


id: PBO:0090248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GAP, GTPase-activating protein Spa2","termid":"PBO:0090248"}


id: PBO:0062298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 9","termid":"PBO:0062298"}


id: FYPO:0002274
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[118917,118909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[118916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[119261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[118908,118912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[119088],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[118905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[118902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is abnormal. A protein metabolic process is a series of chemical reactions and pathways involving a specific protein.","definition_xrefs":["GO:0019538","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03940":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":7,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein metabolic process","references_by_uniquename":{"PMID:26774782":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01787","SJAG_04551","SJAG_03940","SJAG_04697","SJAG_00610"],"single_locus_genotype_uniquenames":["Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck2delta","gms1delta","nem2delta","sty1delta"],"synonyms":[{"name":"abnormal cellular protein metabolic process","type":"exact"},{"name":"abnormal protein metabolism","type":"exact"}],"termid":"FYPO:0002274","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0003727":null,"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: PBO:0055312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2740","termid":"PBO:0055312"}


id: GO:0004846
data:
  {"annotated_genes":["SJAG_04299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73311],"is_not":false,"summary":null,"term":"GO:0004846"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: urate + O2 + H2O = 5-hydroxyisourate + hydrogen peroxide.","definition_xrefs":["EC:1.7.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04299":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"urate oxidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:21368","MetaCyc:URATE-OXIDASE-RXN","UM-BBD_reactionID:r1322"],"synonyms":[{"name":"urate:oxygen oxidoreductase activity","type":"related"},{"name":"uric acid oxidase activity","type":"related"},{"name":"uricase II activity","type":"narrow"},{"name":"uricase activity","type":"related"}],"termid":"GO:0004846","terms_by_termid":{"GO:0004846":null}}


id: PBO:0058932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12 kinetochore complex component","termid":"PBO:0058932"}


id: GO:0141100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine 18 in tRNA= S-adenosyl-L-homocysteine + 2'-O-methylguanosine 18 in tRNA + H+.","definition_xrefs":["PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016741","GO:0140098","GO:0140101","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"tRNA (guanine(18)-2'-O)-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.34-RXN","RHEA:20077","EC:2.1.1.34"],"synonyms":[{"name":"tRNA (guanosine(18)-2'-O)-methyltransferase activity","type":"exact"}],"termid":"GO:0141100"}


id: PBO:0050852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICAM4 antisense RNA 1","termid":"PBO:0050852"}


id: GO:0000749
data:
  {"annotated_genes":["SJAG_01978","SJAG_00990","SJAG_02923","SJAG_03340","SJAG_00993","SJAG_03209","SJAG_01345","SJAG_01718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105284],"is_not":false,"summary":null,"term":"GO:0000749"},{"annotations":[106037,91951,96136,88993,93093,96802],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[70688],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000750"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus that positively regulates the process of conjugation with cellular fusion. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to pheromone","termid":"GO:0071444"},{"relation_name":"positively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02923":null,"SJAG_03209":null,"SJAG_03340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"response to pheromone triggering conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0007328","GO:0030434"],"synonyms":[{"name":"response to pheromone during conjugation with cellular fusion","type":"related"}],"termid":"GO:0000749","terms_by_termid":{"GO:0000749":null,"GO:0000750":null,"GO:0071507":null}}


id: PBO:0026866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_1,1-bis(2-aminoethyl)-2-hydroxy-3-oxotriazane","termid":"PBO:0026866"}


id: PBO:0003969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase escort protein (predicted)","termid":"PBO:0003969"}


id: GO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulation of the activity of cyclin-dependent protein kinase 5 activator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein kinase 5 activator regulator activity (obsolete GO:0016536)","synonyms":[{"name":"cyclin-dependent protein kinase 5 activator regulator activity","type":"exact"},{"name":"cyclin-dependent protein kinase 5 activator, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0016536"}


id: PR:O13803
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 82 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00825","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17H9.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.06c","secondary_identifiers":["UniProtKB:O13803"],"synonyms":[{"name":"Spom972h-CCDC82","type":"exact"}],"termid":"PR:O13803"}


id: PBO:0042097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 169","termid":"PBO:0042097"}


id: PBO:0068970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 214, pseudogene","termid":"PBO:0068970"}


id: PBO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp11 (predicted)","termid":"PBO:0001425"}


id: GO:0090151
data:
  {"annotated_genes":["SJAG_00404","SJAG_01120","SJAG_04208","SJAG_01405","SJAG_03416","SJAG_02355","SJAG_01951","SJAG_02524","SJAG_03502","SJAG_02398","SJAG_04996","SJAG_00569","SJAG_03515","SJAG_05302","SJAG_05300","SJAG_01949","SJAG_03633","SJAG_01917","SJAG_00687","SJAG_01780","SJAG_02034","SJAG_02361","SJAG_02797","SJAG_01640"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73288,102675,73772,112941,107343,75406,116009,107321,77599,90154,88417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[78037,58164,74234,78461,78386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[98338,76345,69744,110149,111539,109798,58881,97987,107322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the mitochondrial membrane.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01640":null,"SJAG_01780":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03633":null,"SJAG_04208":null,"SJAG_04996":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrial membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation in mitochondrial membrane","type":"exact"},{"name":"establishment of protein localization in mitochondrial membrane","type":"exact"}],"termid":"GO:0090151","terms_by_termid":{"GO:0032979":null,"GO:0045039":null,"GO:0045040":null}}


id: GO:0018296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via O4'-(8-alpha-FAD)-L-tyrosine.","definition_xrefs":["RESID:AA0145"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via O4'-(8alpha-FAD)-L-tyrosine (obsolete GO:0018296)","termid":"GO:0018296"}


id: MOD:00786
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one or more (2)H deuterium atoms for (1)H protium atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium substituted residue","synonyms":[{"name":"D(H)Res","type":"exact"}],"termid":"MOD:00786"}


id: MOD:00325
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-beta-methylthioasparagine.","definition_xrefs":["RESID:AA0320","Unimod:39#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"},{"relation_name":"is_a","term_name":"methylthiolated residue","termid":"MOD:01153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-beta-methylthioasparagine","synonyms":[{"name":"(2R,3Xi)-2-amino-3-(methylsulfanyl)-4-butanediamic acid","type":"exact"},{"name":"2,4-diamino-3-(methylsulfanyl)-4-oxobutanoic acid","type":"exact"},{"name":"3-(methylthio)-L-asparagine","type":"exact"},{"name":"3-carboxamido-S-methyl-cysteine","type":"exact"},{"name":"Beta-methylthiolation","type":"related"},{"name":"Methylthio","type":"related"},{"name":"beta-(methylthio)asparagine","type":"exact"}],"termid":"MOD:00325"}


id: FYPO:0002474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the region of a chromosome at which a DNA double-strand break has occurred is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to double-strand break site","synonyms":[{"name":"decreased protein localisation to double-strand break site","type":"exact"},{"name":"decreased protein localization to DSB site","type":"exact"},{"name":"decreased protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"decreased protein localization to site of double-strand break","type":"exact"},{"name":"reduced protein localization to double-strand break site","type":"exact"}],"termid":"FYPO:0002474"}


id: GO:0031327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular biosynthetic process (obsolete GO:0031327)","synonyms":[{"name":"down regulation of cellular biosynthetic process","type":"exact"},{"name":"down-regulation of cellular biosynthetic process","type":"exact"},{"name":"downregulation of cellular biosynthetic process","type":"exact"},{"name":"inhibition of cellular biosynthetic process","type":"narrow"},{"name":"negative regulation of cellular anabolism","type":"exact"},{"name":"negative regulation of cellular biosynthesis","type":"exact"},{"name":"negative regulation of cellular formation","type":"exact"},{"name":"negative regulation of cellular synthesis","type":"exact"}],"termid":"GO:0031327"}


id: PBO:0063413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 1B","termid":"PBO:0063413"}


id: SO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A dinucleotide repeat region composed of GT repeating elements.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide_repeat_microsatellite_feature","termid":"SO:0000290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GT_dinucleotide_repeat","synonyms":[{"name":"d(GT)n","type":"exact"}],"termid":"SO:0001862"}


id: GO:0072151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"mesangial cell differentiation","termid":"GO:0072007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell fate commitment","termid":"GO:0072151"}


id: MONDO:0017935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperinsulinism due to HNF1A deficiency is a form of diazoxide-sensitive diffuse hyperinsulinism (DHI), characterized by transient or persistent hyperinsulinemic hypoglycemia (HH) in infancy that is responsive to diazoxide, evolving in to maturity-onset diabetes of the young subtype 1 (MODY-1) later in life.","definition_xrefs":["Orphanet:324575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"hyperinsulinism due to HNF1A deficiency","secondary_identifiers":["SCTID:721234004","MEDGEN:929144","GARD:21444","UMLS:C4303475"],"synonyms":[{"name":"hyperinsulinemic hypoglycemia due to HNF1A deficiency","type":"exact"}],"termid":"MONDO:0017935","xrefs":{"Monarch":{"xref_id":"0017935"}}}


id: MONDO:0035471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder with multisystemic involvement and primary lymphedema (obsolete MONDO:0035471)","secondary_identifiers":["Orphanet:568047"],"termid":"MONDO:0035471","xrefs":{"Monarch":{"xref_id":"0035471"}}}


id: GO:0004532
data:
  {"annotated_genes":["SJAG_00401","SJAG_04824","SJAG_03276","SJAG_03876","SJAG_04369","SJAG_03132","SJAG_02275","SJAG_04153","SJAG_00841","SJAG_06586","SJAG_04006","SJAG_04407","SJAG_16455","SJAG_00081","SJAG_04818","SJAG_03745","SJAG_02993","SJAG_00966","SJAG_04519","SJAG_01431","SJAG_04587","SJAG_04084","SJAG_02540","SJAG_01798","SJAG_01836","SJAG_01822"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99382,100796],"is_not":false,"summary":null,"term":"GO:0004532"},{"annotations":[63160,79464,118051,74381,89741,79175,70464,101843,103426,66329,105031,98702,104166,69593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[77650,69739,73373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[114176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[78753,116347,77129,73946,107537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[68283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of an RNA molecule.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"},{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01431":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02540":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04519":null,"SJAG_04587":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_06586":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016787","GO:0016788","GO:0003674","GO:0004527"],"is_obsolete":false,"name":"RNA exonuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-429961"],"synonyms":[{"name":"exoribonuclease activity","type":"exact"}],"termid":"GO:0004532","terms_by_termid":{"GO:0000175":null,"GO:0004532":null,"GO:0004534":null,"GO:0004535":null,"GO:0008859":null,"GO:1990838":null}}


id: GO:0102735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoyl-CoA + 3 malonyl-CoA + 3 H+ = 2,4,6-trihydroxybenzophenone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["RHEA:35143","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trihydroxybenzophenone synthase activity","secondary_identifiers":["EC:2.3.1.220","MetaCyc:RXN-7481"],"termid":"GO:0102735"}


id: PBO:0062630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 7 (gene/pseudogene)","termid":"PBO:0062630"}


id: PBO:0028741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_silver","termid":"PBO:0028741"}


id: GO:1900925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycine import.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of glycine import across plasma membrane","termid":"GO:1900923"},{"relation_name":"positively_regulates","term_name":"glycine import across plasma membrane","termid":"GO:1903804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of glycine import across plasma membrane","synonyms":[{"name":"activation of glycine import","type":"narrow"},{"name":"positive regulation of glycine import","type":"broad"},{"name":"up regulation of glycine import","type":"exact"},{"name":"up-regulation of glycine import","type":"exact"},{"name":"upregulation of glycine import","type":"exact"}],"termid":"GO:1900925"}


id: GO:0098926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signal transduction in which the initial step occurs in a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"postsynaptic signal transduction","synonyms":[{"name":"postsynaptic signaling pathway","type":"exact"}],"termid":"GO:0098926"}


id: PR:O14033
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B12.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.12","synonyms":[{"name":"Spom972h-SPAC29B12.12","type":"exact"}],"termid":"PR:O14033"}


id: PBO:0090409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase Tpt1/ CIA machinery involved in ribosome biogenesis protein Yae1 fusion protein","termid":"PBO:0090409"}


id: GO:1901127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of candicidin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"candicidin metabolic process","termid":"GO:1901125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candicidin biosynthetic process","synonyms":[{"name":"candicidin anabolism","type":"exact"},{"name":"candicidin biosynthesis","type":"exact"},{"name":"candicidin formation","type":"exact"},{"name":"candicidin synthesis","type":"exact"}],"termid":"GO:1901127"}


id: GO:0098860
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bundle of hundreds of cross-linked actin filaments (an actin cable), that is the supporting structure of a stereocilium. Filaments are oriented such that the the plus (barbed) ends are at the tip of the protrusion and are capped by a tip complex which bridges to the plasma membrane.","definition_xrefs":["PMID:15661519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle of actin-based cell projection","termid":"GO:0098859"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin filament bundle of stereocilium","termid":"GO:0098860"}


id: MONDO:0003784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the nasal cavity.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity carcinoma","termid":"MONDO:0003212"},{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity carcinoma in situ","secondary_identifiers":["NCIT:C4589","MEDGEN:138077","SCTID:92663007","UMLS:C0347095","DOID:6148","ICD9:231.8"],"synonyms":[{"name":"carcinoma in situ of nasal cavities","type":"exact"},{"name":"carcinoma in situ of nasal cavity","type":"exact"},{"name":"carcinoma in situ of the nasal cavity","type":"exact"},{"name":"nasal cavity carcinoma in situ","type":"exact"},{"name":"nasal cavity in situ carcinoma","type":"exact"},{"name":"stage 0 carcinoma of nasal cavity","type":"exact"},{"name":"stage 0 carcinoma of the nasal cavity","type":"exact"},{"name":"stage 0 nasal cavity cancer","type":"exact"},{"name":"stage 0 nasal cavity cancer aJCC v6, v7, and v8","type":"exact"},{"name":"stage 0 nasal cavity carcinoma","type":"exact"},{"name":"stage 0 nasal cavity carcinoma aJCC v6","type":"exact"},{"name":"stage 0 nasal cavity carcinoma aJCC v7","type":"exact"},{"name":"stage 0 nasal cavity carcinoma aJCC v8","type":"exact"}],"termid":"MONDO:0003784","xrefs":{"Monarch":{"xref_id":"0003784"}}}


id: MONDO:0056804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of peripheral nervous system","secondary_identifiers":["UMLS:C0751427","DOID:0080320","MEDGEN:199653"],"termid":"MONDO:0056804","xrefs":{"Monarch":{"xref_id":"0056804"}}}


id: MONDO:0017835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hypereosinophilic syndrome","termid":"MONDO:0017834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0005267"],"is_obsolete":false,"name":"lymphocytic hypereosinophilic syndrome","secondary_identifiers":["icd11.foundation:367714724","GARD:21397","Orphanet:314970","MEDGEN:1714468","UMLS:C5396402"],"synonyms":[{"name":"HES-L","type":"exact"},{"name":"lymphocytic variant HES","type":"exact"},{"name":"lymphoid HES","type":"exact"}],"termid":"MONDO:0017835","xrefs":{"Monarch":{"xref_id":"0017835"}}}


id: MONDO:0009226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fibrochondrogenesis in which the cause of the disease is a mutation in the COL11A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrochondrogenesis","termid":"MONDO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibrochondrogenesis 1","secondary_identifiers":["OMIM:228520","UMLS:C3278138","MEDGEN:479768","DOID:0080672"],"synonyms":[{"name":"COL11A1 fibrochondrogenesis","type":"exact"},{"name":"FBCG1","type":"related"},{"name":"fibrochondrogenesis 1","type":"exact"},{"name":"fibrochondrogenesis caused by mutation in COL11A1","type":"exact"},{"name":"fibrochondrogenesis type 1","type":"exact"}],"termid":"MONDO:0009226","xrefs":{"Monarch":{"xref_id":"0009226"}}}


id: MONDO:0037251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic congestive enlargement of the spleen leading to the destruction of blood cells resulting in pancytopenia.","definition_xrefs":["PMID:35800794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splenic disorder","termid":"MONDO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"congestive splenomegaly","secondary_identifiers":["UMLS:C0154307","GARD:5888","MEDGEN:56339","MESH:C537903","SCTID:19058002"],"synonyms":[{"name":"Banti syndrome","type":"exact"},{"name":"Banti's disease","type":"exact"},{"name":"Banti's spleen","type":"exact"},{"name":"Banti's syndrome","type":"exact"},{"name":"fibrocongestive splenomegaly","type":"related"},{"name":"idiopathic congestive splenomegaly","type":"related"},{"name":"idiopathic portal hypertension","type":"related"}],"termid":"MONDO:0037251","xrefs":{"Monarch":{"xref_id":"0037251"}}}


id: PBO:0045170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 4","termid":"PBO:0045170"}


id: MOD:01655
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride, to form an alpha-amino-Dansyl-derivatized residue.","definition_xrefs":["Unimod:139#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dansyl chloride derivatized residue","termid":"MOD:01653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dansyl derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"N2DansylRes","type":"exact"}],"termid":"MOD:01655"}


id: GO:1904487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 17alpha-ethynylestradiol stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18805421"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to 17alpha-ethynylestradiol (obsolete GO:1904487)","termid":"GO:1904487"}


id: SO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000082 processed_transcript_attribute (obsolete SO:0000082)","termid":"SO:0000082"}


id: GO:0097433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense body which may contain granules.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao730872736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"dense body","termid":"GO:0097433"}


id: GO:0008494
data:
  {"annotated_genes":["SJAG_03550","SJAG_01517","SJAG_05000","SJAG_01249","SJAG_04959","SJAG_02043"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88331,98465,99216,100221,101667,112420],"is_not":false,"summary":null,"term":"GO:0008494"}]},"cv_name":"molecular_function","definition":"Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation regulator activity","termid":"GO:0045182"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01249":null,"SJAG_01517":null,"SJAG_02043":null,"SJAG_03550":null,"SJAG_04959":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0045182","GO:0003674"],"is_obsolete":false,"name":"translation activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008494","terms_by_termid":{"GO:0008494":null}}


id: PR:O36022
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mnn9 gene.","definition_xrefs":["UniProtKB:O36022","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan polymerase complex subunit mnn9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.10c","synonyms":[{"name":"Spom972h-mnn9","type":"exact"}],"termid":"PR:O36022"}


id: MONDO:0011260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of pancreas lymphoma that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas lymphoma","termid":"MONDO:0002114"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic lymphoma, familial","secondary_identifiers":["MEDGEN:355383","MESH:C566516","UMLS:C1865139","OMIM:602596"],"synonyms":[{"name":"hereditary pancreas lymphoma","type":"exact"},{"name":"pancreatic lymphoma, familial","type":"exact"}],"termid":"MONDO:0011260","xrefs":{"Monarch":{"xref_id":"0011260"}}}


id: MONDO:1011783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha fucosidosis, non-human animal","secondary_identifiers":["OMIA:000396"],"termid":"MONDO:1011783","xrefs":{"Monarch":{"xref_id":"1011783"}}}


id: MONDO:0003900
data:
  {"annotated_genes":["SJAG_03596","SJAG_02763","SJAG_04077","SJAG_05213","SJAG_03151","SJAG_00400","SJAG_00321","SJAG_04118","SJAG_01151","SJAG_04290","SJAG_04969","SJAG_03429","SJAG_04865","SJAG_00031","SJAG_04287","SJAG_01748","SJAG_03805","SJAG_00853","SJAG_01474","SJAG_02855","SJAG_01344","SJAG_04541","SJAG_04569","SJAG_02039","SJAG_03453","SJAG_01349","SJAG_03881","SJAG_01884","SJAG_03905","SJAG_04380","SJAG_03785","SJAG_01013","SJAG_05979","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86976,86977,86978,86979,87131,87132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[85117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[84948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[84951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[85037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[87045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[87000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013944"},{"annotations":[84945,84943,84944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009925"},{"annotations":[85937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[85104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[86502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[86561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[85799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"},{"annotations":[86418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[86521,86522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[85439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[85440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[85664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"},{"annotations":[84845,84846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[86457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[86517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[86328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[85201,85200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[84901,84900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011462"},{"annotations":[86202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[86053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[85670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026777"},{"annotations":[85419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","definition":"A disease involving the connective tissue.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00321":null,"SJAG_00400":null,"SJAG_00853":null,"SJAG_01013":null,"SJAG_01151":null,"SJAG_01344":null,"SJAG_01349":null,"SJAG_01474":null,"SJAG_01748":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02763":null,"SJAG_02855":null,"SJAG_03151":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03785":null,"SJAG_03805":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_04077":null,"SJAG_04118":null,"SJAG_04287":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04865":null,"SJAG_04969":null,"SJAG_05213":null,"SJAG_05239":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"connective tissue disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D003240","DOID:65","EFO:1001986","NCIT:C26729","SCTID:105969002","MEDGEN:1098","UMLS:C0009782","NANDO:2100172"],"synonyms":[{"name":"connective tissue disease","type":"exact"},{"name":"connective tissue disease or disorder","type":"exact"},{"name":"connective tissue diseases","type":"exact"},{"name":"connective tissue disorder","type":"exact"},{"name":"connective tissue disorders","type":"exact"},{"name":"disease of connective tissue","type":"exact"},{"name":"disease or disorder of connective tissue","type":"exact"},{"name":"disease, connective tissue","type":"exact"},{"name":"disorder of connective tissue","type":"exact"},{"name":"primary disorder of connective tissue","type":"exact"},{"name":"tissue disease, connective","type":"exact"}],"termid":"MONDO:0003900","terms_by_termid":{"MONDO:0002629":null,"MONDO:0007205":null,"MONDO:0007483":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007908":null,"MONDO:0009050":null,"MONDO:0009849":null,"MONDO:0009925":null,"MONDO:0010523":null,"MONDO:0010621":null,"MONDO:0011462":null,"MONDO:0012316":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0012481":null,"MONDO:0013766":null,"MONDO:0013818":null,"MONDO:0013944":null,"MONDO:0014007":null,"MONDO:0014629":null,"MONDO:0018874":null,"MONDO:0024541":null,"MONDO:0026777":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null},"xrefs":{"Monarch":{"xref_id":"0003900"}}}


id: PBO:0049476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.0 linker histone","termid":"PBO:0049476"}


id: PBO:0034798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin N-acetyltransferase/DNA polymerase eta Eso1 fusion protein","termid":"PBO:0034798"}


id: GO:1904448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aspartate secretion.","definition_xrefs":["PMID:2342602","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of aspartate secretion","termid":"GO:1904448"}


id: FYPO:0005734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate dehydrogenase activity using NAPD+ as a cofactor is decreased during a cellular response to iron ion starvation.","definition_xrefs":["PMID:20435771","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased glutamate dehydrogenase (NADP+) activity","termid":"FYPO:0000983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased glutamate dehydrogenase (NADP+) activity during cellular response to iron ion starvation","synonyms":[{"name":"decreased NAD(P)H-dependent glutamate dehydrogenase activity during cellular response to iron ion starvation","type":"exact"},{"name":"decreased NADP-GDH activity during cellular response to iron ion starvation","type":"exact"},{"name":"decreased glutamate dehydrogenase (NADP+) activity during iron ion starvation","type":"exact"}],"termid":"FYPO:0005734"}


id: GO:0004314
data:
  {"annotated_genes":["SJAG_04107","SJAG_03972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59669,69920],"is_not":false,"summary":null,"term":"GO:0004314"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + [acyl-carrier protein] = CoA + malonyl-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-malonyltransferase activity","termid":"GO:0016419"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03972":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"[acyl-carrier-protein] S-malonyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:MALONYL-COA-ACP-TRANSACYL-RXN","Reactome:R-HSA-8933547"],"synonyms":[{"name":"ACP S-malonyltransferase activity","type":"exact"},{"name":"FabD","type":"related"},{"name":"MAT","type":"related"},{"name":"MCAT activity","type":"related"},{"name":"[acyl-carrier protein] S-malonyltransferase activity","type":"exact"},{"name":"acyl carrier protein malonyltransferase activity","type":"related"},{"name":"acyl carrier proteinmalonyltransferase activity","type":"related"},{"name":"acyl-carrier-protein S-malonyltransferase activity","type":"related"},{"name":"malonyl coenzyme A-acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl transacylase activity","type":"broad"},{"name":"malonyl transferase activity","type":"broad"},{"name":"malonyl-CoA-acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl-CoA:ACP transacylase activity","type":"related"},{"name":"malonyl-CoA:AcpM transacylase activity","type":"related"},{"name":"malonyl-CoA:acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl-CoA:acyl-carrier-protein S-malonyltransferase activity","type":"related"}],"termid":"GO:0004314","terms_by_termid":{"GO:0004314":null}}


id: GO:0009325
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of nitrate from nitrite with the concomitant reduction of an acceptor.","definition_xrefs":["PMID:2139607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nitrate reductase complex","termid":"GO:0009325"}


id: GO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The leaf morphogenesis process that results in the shaping of a compound leaf. A compound leaf is a leaf having two or more distinct leaflets that are evident as such from early in development.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaf morphogenesis","termid":"GO:0009965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound leaf morphogenesis","termid":"GO:0060777"}


id: GO:0052221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a chemical on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052221)","synonyms":[{"name":"positive chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052221"}


id: GO:0097262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eoxin C4 = eoxin D4 + 5-L-glutamyl amino acid.","definition_xrefs":["GOC:mw","PMID:18184802","PMID:18647347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"eoxin D4 synthase activity","secondary_identifiers":["Reactome:R-HSA-2161945"],"termid":"GO:0097262"}


id: PBO:0113162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inefficient homocysteine synthase; catalyzes de novo homocysteine biosynthesis; capable of catalyzing same reaction as Met17p; affects S-methylmethionine metabolism; similar to Str2p, which is a cystathionine gamma-synthase important in sulfur metabolism; HSU1 is not an essential gene","termid":"PBO:0113162"}


id: MONDO:0012778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 9","secondary_identifiers":["MEDGEN:393783","OMIM:612007","UMLS:C2677605"],"synonyms":[{"name":"CELIAC9","type":"exact"},{"name":"celiac disease, susceptibility to, 9","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 9","type":"related"}],"termid":"MONDO:0012778","xrefs":{"Monarch":{"xref_id":"0012778"}}}


id: PBO:0082065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-ketosphinganine reductase; catalyzes the second step in phytosphingosine synthesis; essential for growth in the absence of exogenous dihydrosphingosine or phytosphingosine; localized to lipid droplets; member of short chain dehydrogenase/reductase protein family; mutations in human homolog KDSR cause recessive progressive symmetric erythrokeratoderma","termid":"PBO:0082065"}


id: GO:0090360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"platelet-derived growth factor production","termid":"GO:0090360"}


id: GO:1902019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cilium-dependent cell motility.","definition_xrefs":["GOC:TermGenie","GOC:jl","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell motility","termid":"GO:2000145"},{"relation_name":"regulates","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cilium-dependent cell motility","synonyms":[{"name":"regulation of ciliary cell motility","type":"related"},{"name":"regulation of cilium cell motility","type":"exact"}],"termid":"GO:1902019"}


id: GO:0044758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts synaptic transmission, the communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse, in its host organism.","definition_xrefs":["PMID:26487282","PMID:31075318","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host synaptic transmission","synonyms":[{"name":"modulation by symbiont of host synaptic transmission","type":"exact"},{"name":"regulation by symbiont of host synaptic transmission","type":"exact"}],"termid":"GO:0044758"}


id: PBO:0000533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APSES domain","termid":"PBO:0000533"}


id: MONDO:0023297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Guttate psoriasis is a skin condition in which small, red, and scaly teardrop-shaped spots appear on the arms, legs, and middle of the body.It is a relatively uncommon form of psoriasis. The condition often develops very suddenly, and is usually triggered by an infection (e.g., strep throat, bacteria infection, upper respiratory infections or other viral infections). Other triggers include injury to the skin, including cuts, burns, and insect bites, certain malarial and heart medications, stress, sunburn, and excessive alcohol consumption. Treatment depends on the severity of the symptoms, ranging from at-home over the counter remedies to medicines that suppress the body's immunesystem to sunlight and phototherapy.","definition_xrefs":["GARD:0010569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis","termid":"MONDO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"guttate psoriasis","secondary_identifiers":["icd11.foundation:1202062855","MEDGEN:91004","ICD9:696.1","ICD10CM:L40.4","SCTID:37042000","UMLS:C0343052"],"synonyms":[{"name":"guttate psoriasis","type":"exact"},{"name":"psoriasis guttata","type":"related"},{"name":"psoriasis guttate","type":"related"}],"termid":"MONDO:0023297","xrefs":{"Monarch":{"xref_id":"0023297"}}}


id: GO:1904598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of wound healing connective tissue replacement, which may be replaced with fibrotic material, that occurs as part of an inflammatory response.","definition_xrefs":["PMID:18245812","GOC:krc","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of connective tissue replacement involved in inflammatory response wound healing","termid":"GO:1904596"},{"relation_name":"is_a","term_name":"positive regulation of connective tissue replacement","termid":"GO:1905205"},{"relation_name":"positively_regulates","term_name":"connective tissue replacement involved in inflammatory response wound healing","termid":"GO:0002248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"activation of connective tissue replacement during inflammatory response","type":"related"},{"name":"activation of connective tissue replacement involved in inflammatory response wound healing","type":"narrow"},{"name":"activation of fibrosis during inflammatory response","type":"narrow"},{"name":"positive regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"positive regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"up regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"up regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"up regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"up-regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"up-regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"up-regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"upregulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"upregulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"upregulation of fibrosis during inflammatory response","type":"narrow"}],"termid":"GO:1904598"}


id: PBO:0017610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, human PPP1R16A ortholog","termid":"PBO:0017610"}


id: GO:0006892
data:
  {"annotated_genes":["SJAG_04931","SJAG_02912","SJAG_03754","SJAG_04609","SJAG_02443","SJAG_03142","SJAG_02320","SJAG_03938","SJAG_00669","SJAG_00108","SJAG_01809","SJAG_02753","SJAG_03137","SJAG_02587","SJAG_01516","SJAG_03848","SJAG_03864","SJAG_01645","SJAG_02240","SJAG_00858","SJAG_03005","SJAG_03756","SJAG_00144","SJAG_01598","SJAG_00330","SJAG_01114","SJAG_00916","SJAG_01488","SJAG_03746","SJAG_04112","SJAG_04966","SJAG_04358","SJAG_02177","SJAG_00430","SJAG_02811","SJAG_02282","SJAG_04902","SJAG_03726","SJAG_03347","SJAG_03970","SJAG_04023","SJAG_01945","SJAG_04338","SJAG_01027","SJAG_04044","SJAG_01335","SJAG_03963","SJAG_00380","SJAG_03072","SJAG_00826","SJAG_02453","SJAG_03838","SJAG_01324"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73222,74462,79262,93996,110423],"is_not":false,"summary":null,"term":"GO:0006892"},{"annotations":[73120,100875,99671,100011,77446,112750,116708,77406,88910,76686,79531,118171,100069,61412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006895"},{"annotations":[94906,69854,106171,112751,109331,77231,106802,108551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[107139,72409,70550,75718,99521,57473,77169,92036,71731,106053,100608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006893"},{"annotations":[90340,108552,79251,77839,73121,75790,110015,96635,111247,75954,99673,101205,93948,117294,95888,77447,77407,69625,77566,99274,96903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[87850],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00144":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00669":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01027":null,"SJAG_01114":null,"SJAG_01324":null,"SJAG_01335":null,"SJAG_01488":null,"SJAG_01516":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01945":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02320":null,"SJAG_02443":null,"SJAG_02453":null,"SJAG_02587":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03142":null,"SJAG_03347":null,"SJAG_03726":null,"SJAG_03746":null,"SJAG_03754":null,"SJAG_03756":null,"SJAG_03838":null,"SJAG_03848":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03963":null,"SJAG_03970":null,"SJAG_04023":null,"SJAG_04044":null,"SJAG_04112":null,"SJAG_04338":null,"SJAG_04358":null,"SJAG_04609":null,"SJAG_04902":null,"SJAG_04931":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"post-Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-199992"],"synonyms":[{"name":"post-Golgi transport","type":"exact"}],"termid":"GO:0006892","terms_by_termid":{"GO:0006892":null,"GO:0006893":null,"GO:0006895":null,"GO:0006896":null,"GO:0042997":null,"GO:0043001":null}}


id: FYPO:0002332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to Golgi apparatus","synonyms":[{"name":"normal protein localisation to Golgi apparatus","type":"exact"},{"name":"normal protein localization to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"normal protein localization to Golgi apparatus during vegetative growth","type":"exact"}],"termid":"FYPO:0002332"}


id: PBO:0048703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon like peptide 2 receptor","termid":"PBO:0048703"}


id: GO:0160185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme phospholipase C.","definition_xrefs":["PMID:28130414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activator activity","termid":"GO:0016004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"phospholipase C activator activity","termid":"GO:0160185"}


id: PBO:0113332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by fungal homology and RT-PCR;  localizes to cytosol and peroxisomes","termid":"PBO:0113332"}


id: GO:1902114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-valine.","definition_xrefs":["PMID:23085840","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valine metabolic process","termid":"GO:0006573"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-valine metabolic process","synonyms":[{"name":"D-valine metabolism","type":"exact"}],"termid":"GO:1902114"}


id: GO:0034333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:aruk","GOC:bc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"},{"relation_name":"is_a","term_name":"adherens junction organization","termid":"GO:0034332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"adherens junction assembly","synonyms":[{"name":"adherens junction formation","type":"exact"}],"termid":"GO:0034333"}


id: PBO:0046886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 9 member B","termid":"PBO:0046886"}


id: PBO:0034179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homocracy_relationship_with","termid":"PBO:0034179"}


id: PBO:0052458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 7 pseudogene 1","termid":"PBO:0052458"}


id: GO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of central B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of central tolerance induction","termid":"GO:0002647"},{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of central B cell tolerance induction","termid":"GO:0002895"},{"relation_name":"negatively_regulates","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of central B cell tolerance induction","synonyms":[{"name":"down regulation of central B cell tolerance induction","type":"exact"},{"name":"down-regulation of central B cell tolerance induction","type":"exact"},{"name":"downregulation of central B cell tolerance induction","type":"exact"},{"name":"inhibition of central B cell tolerance induction","type":"narrow"}],"termid":"GO:0002896"}


id: PBO:0041360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4BPA pseudogene 3","termid":"PBO:0041360"}


id: PBO:0044673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDC antisense RNA 1","termid":"PBO:0044673"}


id: GO:0071701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of a MAP kinase from the nucleus to the cytoplasm.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of MAPK export from nucleus (obsolete GO:0071701)","synonyms":[{"name":"regulation of MAPK export from cell nucleus","type":"exact"},{"name":"regulation of MAPK export out of nucleus","type":"exact"},{"name":"regulation of MAPK transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of MAPK-nucleus export","type":"exact"},{"name":"regulation of cytoplasmic translocation of MAP kinase","type":"exact"},{"name":"regulation of cytoplasmic translocation of mitogen-activated protein kinase","type":"exact"}],"termid":"GO:0071701"}


id: MONDO:0100155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive, multisystem condition caused by pathogenic variants of the PNPLA6 gene, encoding the patatin like phospholipase domain containing 6 protein. RAPH syndrome is characterized by hypogonadism, cerebellar ataxia, retinal dystrophy, peripheral neuropathy, growth hormone deficiency, and cognitive impairment. Additional clinical features may include lower limb spasticity, trichomegaly, alopecia, and facial dismorphism. The term lumps Boucher-Neuhauser, Gordon Holmes, Laurence-Moon, and Oliver-McFarlene syndromes.","definition_xrefs":["PMID:35069422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal dystrophy-ataxia-pituitary hormone abnormality-hypogonadism syndrome","synonyms":[{"name":"RAPH syndrome","type":"exact"}],"termid":"MONDO:0100155","xrefs":{"Monarch":{"xref_id":"0100155"}}}


id: PBO:0029430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0029430"}


id: PR:Q7LKZ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1020.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LKZ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C1020.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.13c","synonyms":[{"name":"Spom972h-SPCC1020.13c","type":"exact"}],"termid":"PR:Q7LKZ6"}


id: _global:starts
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X starts Y if X is part of Y, and A and Y share a 5' or N-terminal boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts","termid":"_global:starts"}


id: MONDO:0800351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 5","secondary_identifiers":["MEDGEN:462040","UMLS:C3150690"],"synonyms":[{"name":"LVNC5","type":"exact"}],"termid":"MONDO:0800351","xrefs":{"Monarch":{"xref_id":"0800351"}}}


id: GO:0048332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesoderm are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesoderm morphogenesis","termid":"GO:0048332"}


id: GO:0009313
data:
  {"annotated_genes":["SJAG_02131","SJAG_03824","SJAG_04301","SJAG_02949","SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101352,101351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[67712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[76452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[71153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_02949":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"oligosaccharide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0051689","Reactome:R-HSA-8853383"],"synonyms":[{"name":"multicellular organismal oligosaccharide catabolic process","type":"narrow"},{"name":"oligosaccharide breakdown","type":"exact"},{"name":"oligosaccharide catabolism","type":"exact"},{"name":"oligosaccharide degradation","type":"exact"}],"termid":"GO:0009313","terms_by_termid":{"GO:0000025":null,"GO:0005987":null,"GO:0005993":null,"GO:0005995":null}}


id: FYPO:0000643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic DNA integrity checkpoint is abnormal. A DNA integrity checkpoint normally regulates cell cycle progression in response to changes in DNA structure. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic DNA integrity checkpoint","synonyms":[{"name":"abnormal mitotic DNA integrity checkpoint activation","type":"exact"}],"termid":"FYPO:0000643"}


id: PBO:0116722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member A (gene/pseudogene)","termid":"PBO:0116722"}


id: MONDO:0015546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-distal monosomy 10q is a rare chromosomal anomaly syndrome, resulting from a partial deletion of the long arm of chromosome 10, with a highly variable phenotype principally characterized by developmental delays (usually of language and speech), variable cognitive impairment and neurobehavioral abnormalities such as autism spectrum disorders and attention deficit disorder. Macrocephaly and mild dysmorphic features may by associated. Overlap with other syndromes, such as Cowden syndrome, Bannayan-Riley-Ruvalcaba syndrome and juvenile polyposis syndrome has been reported.","definition_xrefs":["Orphanet:1581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 10","termid":"MONDO:0016909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-distal monosomy 10q","secondary_identifiers":["UMLS:C4749375","MEDGEN:1657787","GARD:18729"],"synonyms":[{"name":"non-distal deletion 10q","type":"exact"},{"name":"non-distal monosomy type 10q","type":"exact"},{"name":"non-telomeric monosomy 10q","type":"exact"}],"termid":"MONDO:0015546","xrefs":{"Monarch":{"xref_id":"0015546"}}}


id: GO:0120251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a hydrocarbon, a compound consisting of carbon and hydrogen only.","definition_xrefs":["GOC:krc","Wikipedia:Hydrocarbon"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrocarbon biosynthetic process","synonyms":[{"name":"hydrocarbon anabolism","type":"exact"},{"name":"hydrocarbon biosynthesis","type":"exact"},{"name":"hydrocarbon formation","type":"exact"},{"name":"hydrocarbon synthesis","type":"exact"}],"termid":"GO:0120251"}


id: PBO:0052668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 36","termid":"PBO:0052668"}


id: PBO:0073569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 2","termid":"PBO:0073569"}


id: MONDO:0005692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cat scratch disease is an infectious illness caused by the bacteria bartonella (Bartonella henselae). It is believed to be transmitted by cat scratches, bites, or exposure to cat saliva. This self-limiting infectious diseaseis characterized by a bump or blister at the site of the bite or scratch and swelling and pain in the lymph nodes. Other features may include fatigue, headache, achiness, and fever. Although cat-scratch disease usually subsides without treatment, antibiotic and/or antimicrobial therapy may help speed recovery.","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"},{"relation_name":"is_a","term_name":"bartonellosis","termid":"MONDO:0005664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cat-scratch disease","secondary_identifiers":["UMLS:C0007361","SCTID:79974007","EFO:0007195","MESH:D002372","GARD:27","ICD10CM:A28.1","ICD9:078.3","DOID:11258","icd11.foundation:2003001085","MedDRA:10007729","MEDGEN:2861","NCIT:C84620","Orphanet:50839"],"synonyms":[{"name":"Cat scratch disease","type":"related"},{"name":"Cat-scratch fever","type":"exact"},{"name":"Foshay-Mollaret Cat scratch fever","type":"exact"},{"name":"bartonellosis due to Bartonella henselae infection","type":"exact"},{"name":"benign lymphoreticulosis","type":"exact"},{"name":"cat scratch fever","type":"exact"},{"name":"debre's syndrome","type":"exact"},{"name":"debre-Mollaret syndrome","type":"exact"}],"termid":"MONDO:0005692","xrefs":{"Monarch":{"xref_id":"0005692"}}}


id: GO:0003873
data:
  {"annotated_genes":["SJAG_03336","SJAG_02713","SJAG_02596","SJAG_00039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73203,74772,78695,79987],"is_not":false,"summary":null,"term":"GO:0003873"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 6-phosphate + ATP = beta-D-fructose 2,6-bisphosphate + ADP + 2 H+.","definition_xrefs":["RHEA:15653","EC:2.7.1.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_03336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"6-phosphofructo-2-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:6-PHOSPHOFRUCTO-2-KINASE-RXN","Reactome:R-HSA-71802","KEGG_REACTION:R02732"],"synonyms":[{"name":"6-phosphofructo-2-kinase (phosphorylating)","type":"related"},{"name":"6-phosphofructose 2-kinase activity","type":"related"},{"name":"ATP:D-fructose-6-phosphate 2-phosphotransferase activity","type":"related"},{"name":"ATP:beta-D-fructose-6-phosphate 2-phosphotransferase activity","type":"related"},{"name":"fructose 6-phosphate 2-kinase activity","type":"related"},{"name":"phosphofructokinase 2 activity","type":"related"}],"termid":"GO:0003873","terms_by_termid":{"GO:0003873":null}}


id: PBO:0079715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 2","termid":"PBO:0079715"}


id: MONDO:0004585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An excess quantity of amniotic fluid in the amniotic sac as compared to normal values. Typically associated with an amniotic fluid index (AFI) of greater than or equal to 25 cm or a single maximum vertical pocket (MVP) of greater than 8 cm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"placenta disorder","termid":"MONDO:0005917"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhydramnios","secondary_identifiers":["MEDGEN:6936","ICD9:657","DOID:8488","SCTID:86203003","HP:0001561","ICD9:657.0","UMLS:C0020224","ICD9:657.00","MESH:D006831"],"synonyms":[{"name":"polyhydramnios","type":"exact"},{"name":"polyhydramnios (disease)","type":"exact"}],"termid":"MONDO:0004585","xrefs":{"Monarch":{"xref_id":"0004585"}}}


id: PBO:0036348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter Mfs1","termid":"PBO:0036348"}


id: GO:0052705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + N-alpha-methyl-L-histidine = S-adenosyl-L-homocysteine + N-alpha,N-alpha-dimethyl-L-histidine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete methylhistidine N-methyltransferase activity (obsolete GO:0052705)","termid":"GO:0052705"}


id: PR:O60177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp2 gene.","definition_xrefs":["UniProtKB:O60177","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C23E6.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.02","synonyms":[{"name":"Spom972h-rrp2","type":"exact"}],"termid":"PR:O60177"}


id: PBO:0013779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase Ams1 (predicted)","termid":"PBO:0013779"}


id: PBO:0038891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADD3 antisense RNA 1","termid":"PBO:0038891"}


id: PBO:0040733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 corepressor pseudogene 1","termid":"PBO:0040733"}


id: PBO:0073383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SETBP1 divergent transcript","termid":"PBO:0073383"}


id: MONDO:0004540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of malignant peripheral nerve sheath tumor composed predominantly or exclusively of epithelioid cells.","definition_xrefs":["NCIT:C6561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant peripheral nerve sheath tumor","termid":"MONDO:0017827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelioid malignant peripheral nerve sheath tumor","secondary_identifiers":["MEDGEN:272104","SCTID:404038007","DOID:8353","UMLS:C1321427"],"synonyms":[{"name":"epithelioid MPNST","type":"exact"},{"name":"epithelioid malignant peripheral nerve sheath tumor","type":"exact"},{"name":"malignant epithelioid neoplasm of peripheral nerve sheath","type":"exact"},{"name":"malignant epithelioid neoplasm of the peripheral nerve sheath","type":"exact"},{"name":"malignant epithelioid peripheral nerve sheath neoplasm","type":"exact"},{"name":"malignant epithelioid peripheral nerve sheath tumor","type":"exact"},{"name":"malignant epithelioid peripheral nerve sheath tumour","type":"exact"},{"name":"malignant epithelioid tumor of peripheral nerve sheath","type":"exact"},{"name":"malignant epithelioid tumor of the peripheral nerve sheath","type":"exact"},{"name":"malignant epithelioid tumour of peripheral nerve sheath","type":"exact"},{"name":"malignant epithelioid tumour of the peripheral nerve sheath","type":"exact"}],"termid":"MONDO:0004540","xrefs":{"Monarch":{"xref_id":"0004540"}}}


id: GO:0005178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an integrin.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"},{"relation_name":"is_a","term_name":"cell adhesion molecule binding","termid":"GO:0050839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"integrin binding","synonyms":[{"name":"integrin ligand","type":"narrow"}],"termid":"GO:0005178"}


id: GO:2000623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:2000622"},{"relation_name":"negatively_regulates","term_name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:0000184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","synonyms":[{"name":"negative regulation of mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"negative regulation of mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"negative regulation of mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"negative regulation of mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"negative regulation of nonsense-mediated mRNA decay","type":"exact"},{"name":"negative regulation of nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:2000623"}


id: GO:1904101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acadesine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mr","GOC:TermGenie","PMID:20802119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acadesine","termid":"GO:1904101"}


id: PBO:0111857
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor","termid":"PBO:0111857"}


id: PBO:0061584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin 4","termid":"PBO:0061584"}


id: PBO:0050306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 8","termid":"PBO:0050306"}


id: PBO:0036080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin,_incomplete_primary_cell_septum","termid":"PBO:0036080"}


id: MONDO:0007452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monogenic diabetes caused by inactivating mutation(s) in the gene HNF4A, encoding hepatocyte nuclear factor 4-alpha.","definition_xrefs":["NCIT:C129744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0019254","MONDO:0005015","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 1","secondary_identifiers":["DOID:0111099","OMIM:125850","UMLS:C1852093","GARD:3418","MESH:C565101","NANDO:2201069","MEDGEN:377589","NANDO:2200461","SCTID:609562003"],"synonyms":[{"name":"HNF4A-associated monogenic diabetes","type":"exact"},{"name":"MODY HNF4A related","type":"related"},{"name":"MODY type 1","type":"exact"},{"name":"MODY, type 1","type":"related"},{"name":"MODY, type I","type":"exact"},{"name":"MODY1","type":"exact"},{"name":"diabetes mellitus MODY type 1","type":"related"},{"name":"diabetes mellitus type 2","type":"exact"},{"name":"hepatocyte nuclear Factor 4-Alpha associated monogenic diabetes","type":"exact"},{"name":"maturity onset diabetes of the Young, type 1","type":"exact"},{"name":"maturity-onset diabetes of the young, type 1","type":"related"},{"name":"mild juvenile diabetes mellitus","type":"exact"},{"name":"type 1 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0007452","xrefs":{"Monarch":{"xref_id":"0007452"}}}


id: FYPO:0002171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype observed in the vegetative growth phase of the life cycle in which a cell is able to survive at a low temperature.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable cell at low temperature (obsolete FYPO:0002171)","synonyms":[{"name":"cell viable at low temperature","type":"exact"},{"name":"viable cell at low temperature during mitotic cell cycle","type":"related"},{"name":"viable cell at low temperature during vegetative growth","type":"exact"}],"termid":"FYPO:0002171"}


id: PBO:0064499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit C","termid":"PBO:0064499"}


id: PBO:0058792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7161","termid":"PBO:0058792"}


id: GO:0061897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinal + 2 H+ + O2 + 2 reduced [adrenodoxin] = all-trans-3,4-didehydro retinal + 2 H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:27059013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"all-trans retinal 3,4-desaturase activity","termid":"GO:0061897"}


id: PR:Q9P7L9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.04c gene.","definition_xrefs":["UniProtKB:Q9P7L9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L34, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.04c","synonyms":[{"name":"L34mt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC21C3.04c","type":"exact"}],"termid":"PR:Q9P7L9"}


id: PBO:0027955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pyridoxamine-phosphate_oxidase_activity","termid":"PBO:0027955"}


id: MONDO:0000738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic X-linked intellectual disability (obsolete MONDO:0000738)","termid":"MONDO:0000738","xrefs":{"Monarch":{"xref_id":"0000738"}}}


id: GO:0009397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of folic acid and its derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"folic acid-containing compound catabolic process","synonyms":[{"name":"folate and derivative catabolic process","type":"exact"},{"name":"folate and derivative catabolism","type":"exact"},{"name":"folate-containing compound catabolic process","type":"exact"},{"name":"folate-containing compound catabolism","type":"exact"},{"name":"folic acid and derivative catabolic process","type":"exact"},{"name":"folic acid and derivative catabolism","type":"exact"},{"name":"folic acid-containing compound breakdown","type":"exact"},{"name":"folic acid-containing compound catabolism","type":"exact"},{"name":"folic acid-containing compound degradation","type":"exact"},{"name":"vitamin B9 and derivative catabolic process","type":"exact"},{"name":"vitamin B9 and derivative catabolism","type":"exact"},{"name":"vitamin M and derivative catabolic process","type":"exact"},{"name":"vitamin M and derivative catabolism","type":"exact"}],"termid":"GO:0009397"}


id: PBO:0005431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase (predicted)","termid":"PBO:0005431"}


id: PBO:0061423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H quinone dehydrogenase 1","termid":"PBO:0061423"}


id: GO:0008643
data:
  {"annotated_genes":["SJAG_03820","SJAG_03606","SJAG_04068","SJAG_04905","SJAG_03960","SJAG_03608","SJAG_02958","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60783,60834,64566,58437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034219"},{"annotations":[113917,110395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[116953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[110396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[102734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008645"},{"annotations":[95524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[95526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"carbohydrate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006861","GO:0008644"],"synonyms":[{"name":"sugar transport","type":"narrow"}],"termid":"GO:0008643","terms_by_termid":{"GO:0008645":null,"GO:0034219":null,"GO:0046323":null,"GO:0098708":null,"GO:0106081":null,"GO:0106082":null,"GO:0140425":null}}


id: SO:0001968
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant of a protein coding gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_transcript_variant","synonyms":[{"name":"Jannovar:coding_transcript_variant","type":"exact"},{"name":"coding transcript variant","type":"exact"}],"termid":"SO:0001968"}


id: PBO:0055177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2601","termid":"PBO:0055177"}


id: GO:1990321
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXII) chains; type XXII collagen triple helices acts as a cell adhesion ligand for skin epithelial cells and fibroblasts.","definition_xrefs":["PMID:17876790","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XXII trimer","termid":"GO:1990321"}


id: PBO:0072455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 19","termid":"PBO:0072455"}


id: MONDO:0015994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy-white matter spongiosis syndrome","secondary_identifiers":["Orphanet:1877","GARD:3854"],"synonyms":[{"name":"Atrophie blanche","type":"related"},{"name":"muscular dystrophy white matter spongiosis","type":"related"}],"termid":"MONDO:0015994","xrefs":{"Monarch":{"xref_id":"0015994"}}}


id: GO:0090362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor production","termid":"GO:0090361"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor production","termid":"GO:0090360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor production","termid":"GO:0090362"}


id: MONDO:1012220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal sensorimotor polyneuropathy, non-human animal","termid":"MONDO:1011855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal sensorimotor polyneuropathy, dog","secondary_identifiers":["OMIA:000813-9615"],"termid":"MONDO:1012220","xrefs":{"Monarch":{"xref_id":"1012220"}}}


id: PBO:0072342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 28","termid":"PBO:0072342"}


id: SO:0001265
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small noncoding RNA of approximately 22 nucleotides in length which may be involved in regulation of gene expression.","direct_ancestors":[{"relation_name":"has_quality","term_name":"miRNA_encoding","termid":"SO:0000571"},{"relation_name":"has_quality","term_name":"stRNA_encoding","termid":"SO:0000656"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_gene","secondary_identifiers":["SO:0001270"],"synonyms":[{"name":"miRNA gene","type":"exact"},{"name":"stRNA gene","type":"exact"},{"name":"stRNA_gene","type":"exact"}],"termid":"SO:0001265"}


id: GO:0047139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homocystine + 2 reduced glutathione = oxidized glutathione + 2 homocysteine.","definition_xrefs":["MetaCyc:1.8.4.1-RXN","EC:1.8.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutathione-homocystine transhydrogenase activity","secondary_identifiers":["RHEA:11464"],"synonyms":[{"name":"glutathione:homocystine oxidoreductase activity","type":"related"}],"termid":"GO:0047139"}


id: PBO:0084813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant has a respiratory growth defect and displays reduced peroxide-induced mitochondrial ROS; partially overlaps the verified gene MRPL51/YPR100W","termid":"PBO:0084813"}


id: GO:2000085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:2000084"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"},{"relation_name":"negatively_regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"negative regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000085"}


id: PATO:0001745
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation exposure quality inhering in a substance by virtue of the radiation energy \\\"deposited\\\" in a kilogram of a substance.","definition_xrefs":["arpansa:arpansa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation exposure","termid":"PATO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation absorbed dose","termid":"PATO:0001745"}


id: GO:1900857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of fumitremorgin B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fumitremorgin B biosynthetic process (obsolete GO:1900857)","synonyms":[{"name":"up regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"up-regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"upregulation of fumitremorgin B biosynthetic process","type":"exact"}],"termid":"GO:1900857"}


id: PBO:0038395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-affected_by","termid":"PBO:0038395"}


id: FYPO:0000835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level","termid":"FYPO:0000834"},{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level","synonyms":[{"name":"decreased protein accumulation","type":"related"},{"name":"protein/peptide accumulation: decreased","type":"related"},{"name":"reduced protein level","type":"exact"}],"termid":"FYPO:0000835"}


id: PBO:0074074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 48","termid":"PBO:0074074"}


id: GO:2001219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of S/G2 transition of mitotic cell cycle.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of S/G2 transition of mitotic cell cycle (obsolete GO:2001219)","synonyms":[{"name":"positive regulation of S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:2001219"}


id: GO:0044782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:jl","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium organization","synonyms":[{"name":"microtubule-based flagellum organization","type":"exact"}],"termid":"GO:0044782"}


id: MONDO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biphasic neoplasm that arises from the ovary and is characterized by the presence of mullerian-type epithelial tissue in a mesenchymal sarcomatous stroma. The presence of a high grade sarcomatous component is associated with recurrences and metastases.","definition_xrefs":["NCIT:C7317"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian carcinosarcoma","termid":"MONDO:0003792"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian adenosarcoma","secondary_identifiers":["MEDGEN:277458","UMLS:C1335169","DOID:4115"],"synonyms":[{"name":"adenosarcoma of ovary","type":"exact"},{"name":"ovarian Mullerian adenosarcoma","type":"exact"},{"name":"ovarian Müllerian adenosarcoma","type":"exact"},{"name":"ovarian adenosarcoma","type":"exact"},{"name":"ovarian mesodermal adenosarcoma","type":"exact"},{"name":"ovarian mullerian adenosarcoma","type":"exact"},{"name":"ovary adenosarcoma","type":"exact"}],"termid":"MONDO:0002880","xrefs":{"Monarch":{"xref_id":"0002880"}}}


id: PBO:0039952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C","termid":"PBO:0039952"}


id: GO:0005562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA (obsolete GO:0005562)","synonyms":[{"name":"RNA","type":"exact"}],"termid":"GO:0005562"}


id: GO:0038065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by collagen binding to a cell surface receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:uh","GOC:bf","PMID:21568710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"collagen-activated signaling pathway","synonyms":[{"name":"collagen-activated signalling pathway","type":"exact"}],"termid":"GO:0038065"}


id: GO:0051062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dUDP + thioredoxin disulfide + H2O = UDP + thioredoxin.","definition_xrefs":["MetaCyc:UDPREDUCT-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor","termid":"GO:0004748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP reductase activity","secondary_identifiers":["RHEA:28026"],"synonyms":[{"name":"UDP reduction","type":"related"}],"termid":"GO:0051062"}


id: PBO:0042917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR antisense RNA 1","termid":"PBO:0042917"}


id: MONDO:0017118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with a cerebellar malformation as major feature (obsolete MONDO:0017118)","secondary_identifiers":["Orphanet:269523"],"termid":"MONDO:0017118","xrefs":{"Monarch":{"xref_id":"0017118"}}}


id: SO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a pseudogene where by an mRNA was retrotransposed. The mRNA sequence is transcribed back into the genome, lacking introns and promotors, but often including a polyA tail.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000900 processed (obsolete SO:0000900)","termid":"SO:0000900"}


id: MONDO:0007328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroidal osteoma, bilateral","secondary_identifiers":["OMIM:118865","UMLS:C1861558","MESH:C566124","MEDGEN:396164"],"synonyms":[{"name":"choroidal osteoma, bilateral","type":"exact"}],"termid":"MONDO:0007328","xrefs":{"Monarch":{"xref_id":"0007328"}}}


id: PBO:0062598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 8 pseudogene","termid":"PBO:0062598"}


id: GO:0006399
data:
  {"annotated_genes":["SJAG_01418","SJAG_02288","SJAG_03276","SJAG_04993","SJAG_01172","SJAG_00865","SJAG_03236","SJAG_02275","SJAG_02993","SJAG_05023","SJAG_01024","SJAG_04233","SJAG_04818","SJAG_02084","SJAG_00892","SJAG_03328","SJAG_01375","SJAG_02428","SJAG_01818","SJAG_03367","SJAG_03234","SJAG_02863","SJAG_04756","SJAG_04175","SJAG_02302","SJAG_00088","SJAG_04848","SJAG_03240","SJAG_01269","SJAG_00319","SJAG_04182","SJAG_05228","SJAG_00579","SJAG_01623","SJAG_04321","SJAG_00499","SJAG_02179","SJAG_04084","SJAG_04735","SJAG_04408","SJAG_04265","SJAG_03745","SJAG_00195","SJAG_03179","SJAG_01176","SJAG_01041","SJAG_00358","SJAG_02865","SJAG_00235","SJAG_03572","SJAG_01877","SJAG_04201","SJAG_03923","SJAG_04738","SJAG_04885","SJAG_04261","SJAG_03425","SJAG_03796","SJAG_04700","SJAG_02101","SJAG_06560","SJAG_01369","SJAG_00683","SJAG_04680","SJAG_03896","SJAG_03616","SJAG_04582","SJAG_01551","SJAG_00443","SJAG_01261","SJAG_02637","SJAG_03677","SJAG_04907","SJAG_02553","SJAG_02978","SJAG_00352","SJAG_02547","SJAG_06284","SJAG_04452","SJAG_01704","SJAG_00886","SJAG_00255","SJAG_03952","SJAG_04181","SJAG_04065","SJAG_01765","SJAG_01248","SJAG_00174","SJAG_04916","SJAG_01521","SJAG_02015","SJAG_16455","SJAG_04380","SJAG_03761","SJAG_04649","SJAG_04153","SJAG_01791","SJAG_04367","SJAG_00325","SJAG_04006","SJAG_04113","SJAG_03984","SJAG_01575","SJAG_02099","SJAG_03932","SJAG_04453","SJAG_05249","SJAG_01797","SJAG_00997","SJAG_05334","SJAG_01260","SJAG_02352","SJAG_06613","SJAG_01702","SJAG_04189","SJAG_04890","SJAG_03913","SJAG_00854","SJAG_00955","SJAG_02042","SJAG_01302","SJAG_04824","SJAG_02386","SJAG_00186","SJAG_00306","SJAG_01259","SJAG_01638","SJAG_00956","SJAG_00378","SJAG_01781","SJAG_04285","SJAG_04704","SJAG_00754","SJAG_03545","SJAG_01314","SJAG_04736","SJAG_01191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107546],"is_not":false,"summary":null,"term":"GO:0006399"},{"annotations":[66617,57789,63348,64042,57329,57065,61163,64067,59050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106074"},{"annotations":[71076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019988"},{"annotations":[80060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061504"},{"annotations":[69713,117667,80093,87498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[77885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[118358,75344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[94026,116700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[92562,76119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[90075,94721,115283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180037"},{"annotations":[102850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990983"},{"annotations":[106229,72189,107217,71021,99378,70022,74876,115191,88139,71385,70472,97010,101841,77316,115632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"},{"annotations":[59014,67408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[92791,98235,98700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042780"},{"annotations":[70093,74702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001680"},{"annotations":[61082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099116"},{"annotations":[79104,64218,60486,98236,70986,59196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001682"},{"annotations":[71994,107075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051391"},{"annotations":[106526,109907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[105545,90220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[64738,60563,74271,65754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002943"},{"annotations":[72450,75065,76117,95979,72036,94460,73601,97829,72175,62963,75708,73850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030488"},{"annotations":[61076,70693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006400"},{"annotations":[77884,70909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[73123,103890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[114567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[115138,67211,87398,90852,105423,105424,63498,70942,71278,96256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008033"},{"annotations":[78242,75537,90972,102244,72677,105989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031119"},{"annotations":[73617,77695,73514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006388"},{"annotations":[78585,98038,100893,58901,99220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002949"},{"annotations":[76282,79378,74899,76780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042797"},{"annotations":[100867,73510,58974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002100"},{"annotations":[79511,118518,113715,109904,100333,72087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002926"},{"annotations":[88023,93690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[71991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002101"},{"annotations":[106639,73952,77199,73941,116940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002143"},{"annotations":[118386,87553,105317,95814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002098"},{"annotations":[66141,72448,61546,73745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0101030"},{"annotations":[78766,72811,73658,71136],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000379"},{"annotations":[97605,102642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"},{"annotations":[74810,73602,72037,94461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tRNA, transfer RNA, a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis. Transfer RNA is characterized by the presence of many unusual minor bases, the function of which has not been completely established.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":137,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00174":null,"SJAG_00186":null,"SJAG_00195":null,"SJAG_00235":null,"SJAG_00255":null,"SJAG_00306":null,"SJAG_00319":null,"SJAG_00325":null,"SJAG_00352":null,"SJAG_00358":null,"SJAG_00378":null,"SJAG_00443":null,"SJAG_00499":null,"SJAG_00579":null,"SJAG_00683":null,"SJAG_00754":null,"SJAG_00854":null,"SJAG_00865":null,"SJAG_00886":null,"SJAG_00892":null,"SJAG_00955":null,"SJAG_00956":null,"SJAG_00997":null,"SJAG_01024":null,"SJAG_01041":null,"SJAG_01172":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01248":null,"SJAG_01259":null,"SJAG_01260":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01302":null,"SJAG_01314":null,"SJAG_01369":null,"SJAG_01375":null,"SJAG_01418":null,"SJAG_01521":null,"SJAG_01551":null,"SJAG_01575":null,"SJAG_01623":null,"SJAG_01638":null,"SJAG_01702":null,"SJAG_01704":null,"SJAG_01765":null,"SJAG_01781":null,"SJAG_01791":null,"SJAG_01797":null,"SJAG_01818":null,"SJAG_01877":null,"SJAG_02015":null,"SJAG_02042":null,"SJAG_02084":null,"SJAG_02099":null,"SJAG_02101":null,"SJAG_02179":null,"SJAG_02275":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_02352":null,"SJAG_02386":null,"SJAG_02428":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02637":null,"SJAG_02863":null,"SJAG_02865":null,"SJAG_02978":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_03276":null,"SJAG_03328":null,"SJAG_03367":null,"SJAG_03425":null,"SJAG_03545":null,"SJAG_03572":null,"SJAG_03616":null,"SJAG_03677":null,"SJAG_03745":null,"SJAG_03761":null,"SJAG_03796":null,"SJAG_03896":null,"SJAG_03913":null,"SJAG_03923":null,"SJAG_03932":null,"SJAG_03952":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04065":null,"SJAG_04084":null,"SJAG_04113":null,"SJAG_04153":null,"SJAG_04175":null,"SJAG_04181":null,"SJAG_04182":null,"SJAG_04189":null,"SJAG_04201":null,"SJAG_04233":null,"SJAG_04261":null,"SJAG_04265":null,"SJAG_04285":null,"SJAG_04321":null,"SJAG_04367":null,"SJAG_04380":null,"SJAG_04408":null,"SJAG_04452":null,"SJAG_04453":null,"SJAG_04582":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04700":null,"SJAG_04704":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04738":null,"SJAG_04756":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04848":null,"SJAG_04885":null,"SJAG_04890":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_04993":null,"SJAG_05023":null,"SJAG_05228":null,"SJAG_05249":null,"SJAG_05334":null,"SJAG_06284":null,"SJAG_06560":null,"SJAG_06613":null,"SJAG_16455":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tRNA metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"tRNA metabolism","type":"exact"}],"termid":"GO:0006399","terms_by_termid":{"GO:0000379":null,"GO:0001680":null,"GO:0001682":null,"GO:0002098":null,"GO:0002100":null,"GO:0002101":null,"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002143":null,"GO:0002926":null,"GO:0002939":null,"GO:0002940":null,"GO:0002943":null,"GO:0002946":null,"GO:0002949":null,"GO:0006388":null,"GO:0006399":null,"GO:0006400":null,"GO:0008033":null,"GO:0019988":null,"GO:0030488":null,"GO:0031119":null,"GO:0031591":null,"GO:0042780":null,"GO:0042797":null,"GO:0051391":null,"GO:0061504":null,"GO:0070899":null,"GO:0070901":null,"GO:0071038":null,"GO:0072670":null,"GO:0099116":null,"GO:0101030":null,"GO:0106004":null,"GO:0106074":null,"GO:0106217":null,"GO:0180037":null,"GO:1990180":null,"GO:1990799":null,"GO:1990983":null}}


id: GO:0034229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ethanolamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ethanolamine (2-aminoethanol, monoethanolamine) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids, such as phosphatidylethanolamine.","definition_xrefs":["GOC:rn","PMID:3514579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amine transport","termid":"GO:0015837"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"ethanolamine transport","synonyms":[{"name":"2-aminoethanol transport","type":"exact"},{"name":"monoethanolamine transport","type":"exact"}],"termid":"GO:0034229"}


id: GO:0036510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an alpha-1,2-linked mannose from the C-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:bf","PMID:20065073","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum mannose trimming","termid":"GO:1904380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimming of terminal mannose on C branch","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8C(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8C","type":"related"},{"name":"glycoprotein mannose trimming on C branch","type":"exact"}],"termid":"GO:0036510"}


id: MONDO:0100211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome with immune dysregulation","termid":"MONDO:0100210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"growth hormone insensitivity with immune dysregulation 1, autosomal recessive","secondary_identifiers":["DOID:0080836","MESH:C537871","GARD:18311","NANDO:2200737","SCTID:724179008","UMLS:C5435698","Orphanet:220465","OMIM:245590","MEDGEN:1734133"],"synonyms":[{"name":"Laron syndrome due to postreceptor defect","type":"exact"},{"name":"Laron syndrome with immunodeficiency","type":"exact"},{"name":"Laron-like syndrome","type":"exact"},{"name":"growth hormone insensitivity due to postreceptor defect","type":"exact"},{"name":"growth hormone insensitivity with immunodeficiency","type":"related"},{"name":"short stature due to STAT5b deficiency","type":"exact"}],"termid":"MONDO:0100211","xrefs":{"Monarch":{"xref_id":"0100211"}}}


id: PBO:0001783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (predicted)","termid":"PBO:0001783"}


id: GO:0090503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving the hydrolysis of terminal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA phosphodiester bond hydrolysis, exonucleolytic (obsolete GO:0090503)","termid":"GO:0090503"}


id: MOD:00247
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form L-serine thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0242","PubMed:8183941","PubMed:8895467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-serine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxyethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Ser-Cys)","type":"exact"},{"name":"L-serine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00247"}


id: PBO:0013053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap130","termid":"PBO:0013053"}


id: GO:0032206
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomere maintenance","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of telomere maintenance","type":"narrow"},{"name":"stimulation of telomere maintenance","type":"narrow"},{"name":"up regulation of telomere maintenance","type":"exact"},{"name":"up-regulation of telomere maintenance","type":"exact"},{"name":"upregulation of telomere maintenance","type":"exact"}],"termid":"GO:0032206","terms_by_termid":{"GO:0032215":null}}


id: _global:has_disposition
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_characteristic","termid":"_global:has_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_disposition","secondary_identifiers":["RO:0000091"],"termid":"_global:has_disposition"}


id: MONDO:0019741
data:
  {"annotated_genes":["SJAG_03280","SJAG_00394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010916"},{"annotations":[85532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031062"}]},"cv_name":"mondo","definition":"An instance of cystic kidney disease that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic kidney disease","termid":"MONDO:0002473"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00394":null,"SJAG_03280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"familial cystic renal disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:93587","MEDGEN:1842297","GARD:19228","UMLS:C5680285"],"synonyms":[{"name":"hereditary cystic kidney disease","type":"exact"}],"termid":"MONDO:0019741","terms_by_termid":{"MONDO:0010916":null,"MONDO:0031062":null},"xrefs":{"Monarch":{"xref_id":"0019741"}}}


id: PBO:0057761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1976","termid":"PBO:0057761"}


id: GO:0019806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R-H + 2 bromide + H2O2 = 2 R-Br + 2 H2O. Enzymes with this activity often accept other halide ions as substrates, including chloride and iodide.","definition_xrefs":["EC:1.11.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"haloperoxidase activity","termid":"GO:0140905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"bromide peroxidase activity","synonyms":[{"name":"bromoperoxidase activity","type":"exact"}],"termid":"GO:0019806"}


id: GO:0031305
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial inner membrane (obsolete GO:0031305)","synonyms":[{"name":"integral to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031305"}


id: GO:0102865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a gamma-linolenoyl-[glycerolipid] + 2 ferrocytochrome b5 + O2 + 2 H+ = a (9Z,12Z)-octadeca-9,12-dien-6-ynoyl-[glycerolipid] + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["RHEA:46536","GOC:pz","PMID:10848999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"delta6-acyl-lipid desaturase activity","secondary_identifiers":["EC:1.14.19.38","MetaCyc:RXN-8343"],"termid":"GO:0102865"}


id: PBO:0057548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR663A host gene","termid":"PBO:0057548"}


id: MONDO:0021535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade well differentiated tumor with neuroendocrine differentiation that arises from the pancreas. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal or less than 2%.","definition_xrefs":["NCIT:C95584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic neuroendocrine tumor G1","secondary_identifiers":["SCTID:254613007","MEDGEN:459467","UMLS:C2987241"],"synonyms":[{"name":"grade 1 neuroendocrine neoplasm of pancreas","type":"exact"},{"name":"pancreas NET G1","type":"exact"},{"name":"pancreas carcinoid tumor","type":"exact"},{"name":"pancreas carcinoid tumour","type":"exact"},{"name":"pancreas neuroendocrine neoplasm G1","type":"exact"},{"name":"pancreas neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"pancreatic NET G1","type":"exact"},{"name":"pancreatic neuroendocrine tumor G1","type":"exact"}],"termid":"MONDO:0021535","xrefs":{"Monarch":{"xref_id":"0021535"}}}


id: PBO:0085420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; involved in efflux of fluconazole, diazaborine, benomyl, methotrexate, and other drugs; expression induced in cells treated with the mycotoxin patulin; relocalizes from nucleus to plasma membrane upon DNA replication stress","termid":"PBO:0085420"}


id: PBO:0042836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20DC divergent transcript","termid":"PBO:0042836"}


id: GO:0000730
data:
  {"annotated_genes":["SJAG_03221","SJAG_02267","SJAG_04530","SJAG_02708","SJAG_01410","SJAG_02079","SJAG_00757","SJAG_01708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64764,65409,72050,74856,75529],"is_not":false,"summary":null,"term":"GO:0000730"},{"annotations":[78326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[107416,110053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) into higher order oligomers on single-stranded DNA.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"is_a","term_name":"DNA repair complex assembly","termid":"GO:0090735"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0006310","GO:0006281","GO:0006259","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"DNA recombinase assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Rad51 nucleoprotein filament formation","type":"exact"}],"termid":"GO:0000730","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null}}


id: PBO:0067055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 76, pseudogene","termid":"PBO:0067055"}


id: MONDO:0007236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"branchio-oto-renal syndrome","termid":"MONDO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"branchiootorenal syndrome 1","secondary_identifiers":["MEDGEN:1632634","DOID:0111423","UMLS:C4551702","OMIM:113650"],"synonyms":[{"name":"BOR1","type":"related"},{"name":"Melnick-Fraser syndrome","type":"related"},{"name":"branchiootorenal dysplasia","type":"related"},{"name":"branchiootorenal syndrome 1","type":"exact"},{"name":"branchiootorenal syndrome 1, with or without cataracts","type":"exact"},{"name":"branchiootorenal syndrome type 1","type":"exact"}],"termid":"MONDO:0007236","xrefs":{"Monarch":{"xref_id":"0007236"}}}


id: PBO:0043539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 7","termid":"PBO:0043539"}


id: GO:0090413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any negative regulation of transcription from RNA polymerase II promoter that is involved in fatty acid biosynthetic process.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process (obsolete GO:0090413)","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process","type":"exact"}],"termid":"GO:0090413"}


id: PBO:0051757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate multikinase pseudogene 1","termid":"PBO:0051757"}


id: GO:1900796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terrequinone A.","definition_xrefs":["GOC:TermGenie","PMID:17704773","PMID:17291795","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"terrequinone A biosynthetic process","secondary_identifiers":["GO:1900794"],"synonyms":[{"name":"terrequinone A anabolism","type":"exact"},{"name":"terrequinone A biosynthesis","type":"exact"},{"name":"terrequinone A formation","type":"exact"},{"name":"terrequinone A metabolic process","type":"broad"},{"name":"terrequinone A metabolism","type":"broad"},{"name":"terrequinone A synthesis","type":"exact"}],"termid":"GO:1900796"}


id: PBO:0051784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F2","termid":"PBO:0051784"}


id: GO:0055100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to adiponectin, a protein hormone produced by adipose tissue that modulates a number of metabolic processes, including glucose regulation and fatty acid catabolism.","definition_xrefs":["GOC:rl","PMID:15210937","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"adiponectin binding","termid":"GO:0055100"}


id: PBO:0046894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM20A golgi associated secretory pathway pseudokinase","termid":"PBO:0046894"}


id: PBO:0049863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase B","termid":"PBO:0049863"}


id: PR:000027533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcriptional regulator prz1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q09838-1, MOD:00696.","definition_xrefs":["PMID:12637524","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional regulator prz1","termid":"PR:000027513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prz1/PhosRes+","pombase_gene_id":"SPAC4G8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: transcriptional regulator prz1 isoform 1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-prz1/iso:1/Phos:1","type":"exact"},{"name":"prz1/PhosRes+","type":"exact"}],"termid":"PR:000027533"}


id: PR:Q09758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-cysteine N-palmitoyltransferase HHAT-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-bound O-acyltransferase C24H6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.01c","secondary_identifiers":["UniProtKB:Q09758"],"synonyms":[{"name":"Spom972h-HHATL","type":"exact"}],"termid":"PR:Q09758"}


id: GO:1990527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that is involved in the transcriptional regulation of primarily filamentation genes, but also mating genes, in the yeast S. cerevisiae.","definition_xrefs":["GOC:rb","PMID:16782869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Tec1p-Ste12p-Dig1p complex","termid":"GO:1990527"}


id: PBO:0043526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 7","termid":"PBO:0043526"}


id: PBO:0013801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase Arg12","termid":"PBO:0013801"}


id: PBO:0052286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDSR divergent transcript","termid":"PBO:0052286"}


id: PBO:0004884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1","termid":"PBO:0004884"}


id: PATO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to produce only one differentiated cell type.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Unipotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unipotent","termid":"PATO:0001400"}


id: PBO:0068391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 212","termid":"PBO:0068391"}


id: PBO:0066197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM15 antisense RNA 1","termid":"PBO:0066197"}


id: PBO:0029436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division","termid":"PBO:0029436"}


id: MONDO:0016143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoglycanopathy","termid":"MONDO:0016140"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of gamma-sarcoglycan","secondary_identifiers":["UMLS:C5680805","GARD:20392","MEDGEN:1842385","Orphanet:207067"],"synonyms":[{"name":"gamma-sarcoglycanopathy","type":"narrow"}],"termid":"MONDO:0016143","xrefs":{"Monarch":{"xref_id":"0016143"}}}


id: GO:0048018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a receptor to effect a change in the activity of the receptor. Ligands may be produced by the same cell that expresses the receptor. Ligands may also be expressed at the plasma membrane of an adjacent cell (e.g. Notch ligands) or be secreted and diffuse extracellularly from their point of origin to the receiving cell (e.g. interleukins).","definition_xrefs":["GOC:molecular_function_refactoring","GOC:kv","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0098772","GO:0003674","GO:0140677","GO:0005488"],"is_obsolete":false,"name":"receptor ligand activity","secondary_identifiers":["Reactome:R-HSA-381612","GO:0071884","Reactome:R-HSA-163625"],"synonyms":[{"name":"receptor agonist activity","type":"broad"},{"name":"signaling molecule","type":"exact"},{"name":"signaling receptor ligand activity","type":"exact"}],"termid":"GO:0048018"}


id: PBO:0055974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and IQ motif containing 4","termid":"PBO:0055974"}


id: FYPO:0002374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cortical patches is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch morphology","termid":"FYPO:0000791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin cortical patch morphology during mitosis","synonyms":[{"name":"abnormal F-actin patch morphology during mitosis","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitosis during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch morphology during mitosis during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitotic M phase","type":"related"},{"name":"abnormal actin cortical patch morphology during mitotic nuclear division","type":"exact"},{"name":"abnormal actin patch morphology during mitosis","type":"exact"}],"termid":"FYPO:0002374"}


id: PBO:0061218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 9","termid":"PBO:0061218"}


id: PBO:0072822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 15","termid":"PBO:0072822"}


id: PBO:0076588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 10A","termid":"PBO:0076588"}


id: PBO:0063078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pappalysin 1","termid":"PBO:0063078"}


id: MONDO:0012123
data:
  {"annotated_genes":["SJAG_02903"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86201],"is_not":false,"summary":null,"term":"MONDO:0012123"}]},"cv_name":"mondo","definition":"The CDG (Congenital Disorders of Glycosylation) syndromes are a group of autosomal recessive disorders affecting glycoprotein synthesis. CDG syndrome type Ie is characterized by psychomotor delay, seizures, hypotonia, facial dysmorphism and microcephaly. Ocular anomalies are also very common.","definition_xrefs":["Orphanet:79322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation type 1E","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080557","MESH:C535743","SCTID:725078006","OMIM:608799","UMLS:C1837396","NCIT:C126871","MEDGEN:324784","GARD:9831"],"synonyms":[{"name":"CDG 1E","type":"related"},{"name":"CDG Ie","type":"related"},{"name":"CDG syndrome type Ie","type":"exact"},{"name":"CDG-Ie","type":"exact"},{"name":"CDG1E","type":"exact"},{"name":"CDGIe","type":"exact"},{"name":"DPM1 congenital disorder of glycosylation","type":"exact"},{"name":"DPM1-CDG","type":"related"},{"name":"DPM1-CDG (CDG-Ie)","type":"related"},{"name":"Dol-P-mannosyltransferase deficiency","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ie","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1E","type":"related"},{"name":"congenital disorder of glycosylation caused by mutation in DPM1","type":"exact"},{"name":"congenital disorder of glycosylation type 1E","type":"exact"},{"name":"congenital disorder of glycosylation type 1e","type":"exact"},{"name":"congenital disorder of glycosylation type Ie","type":"exact"},{"name":"congenital disorder of glycosylation, type Ie","type":"related"}],"termid":"MONDO:0012123","terms_by_termid":{"MONDO:0012123":null},"xrefs":{"Monarch":{"xref_id":"0012123"}}}


id: PBO:0082296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginyl-tRNA synthetase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YDR341C has a paralog, MSR1, that arose from the whole genome duplication","termid":"PBO:0082296"}


id: PATO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000846 auditory threshold (obsolete PATO:0000846)","termid":"PATO:0000846"}


id: PBO:0029554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ethyl_methanesulfonate","termid":"PBO:0029554"}


id: MONDO:0012223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis, progressive patterned scalp, with wiry hair, onycholysis, and cleft lip/palate","secondary_identifiers":["MEDGEN:324538","OMIM:609250","UMLS:C1836521","MESH:C563765"],"synonyms":[{"name":"Marie Unna-like scalp hypotrichosis","type":"related"},{"name":"hypotrichosis, progressive patterned scalp, with wiry hair, onycholysis, and cleft lip/palate","type":"exact"}],"termid":"MONDO:0012223","xrefs":{"Monarch":{"xref_id":"0012223"}}}


id: FYPO:0006974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more triglycerides measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular triglyceride level during vegetative growth","termid":"FYPO:0005585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"triglyceride absent from cell","synonyms":[{"name":"TAG absent from cell","type":"exact"},{"name":"triacylglycerol absent from cell","type":"exact"},{"name":"triglyceride absent from cell during mitotic cell cycle","type":"related"},{"name":"triglyceride absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0006974"}


id: PATO:0001857
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in a bearer by virtue of the bearer's curving inward.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concave","termid":"PATO:0001857"}


id: MONDO:0014536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any thrombocytopenia in which the cause of the disease is a mutation in the ETV6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary thrombocytopenia and hematologic cancer predisposition syndrome","termid":"MONDO:0011071"},{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 5","secondary_identifiers":["UMLS:C4015537","OMIM:616216","NCIT:C203436","MEDGEN:863974"],"synonyms":[{"name":"ETV6 thrombocytopenia","type":"exact"},{"name":"THC5","type":"related"},{"name":"thrombocytopenia 5","type":"exact"},{"name":"thrombocytopenia 5 with increased susceptibility to malignancy","type":"related"},{"name":"thrombocytopenia caused by mutation in ETV6","type":"exact"},{"name":"thrombocytopenia type 5","type":"exact"},{"name":"thrombocytopenia, autosomal dominant, 5","type":"related"}],"termid":"MONDO:0014536","xrefs":{"Monarch":{"xref_id":"0014536"}}}


id: PBO:0049953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible factor 3 subunit alpha","termid":"PBO:0049953"}


id: PBO:0062379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 1 pseudogene","termid":"PBO:0062379"}


id: PBO:0065092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 1","termid":"PBO:0065092"}


id: PATO:0001396
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A monadic quality of continuant that exists at the cellular level of organisation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular quality","termid":"PATO:0001396"}


id: PBO:0000903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine diphosphokinase Tnr3","termid":"PBO:0000903"}


id: PBO:0081187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc fingers and homeoboxes 3","termid":"PBO:0081187"}


id: FYPO:0007072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase B of mitosis is shorter than normal. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["PomBase:mah","GO:0000092","PMID:31427431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of cell cycle phase","termid":"FYPO:0000410"},{"relation_name":"is_a","term_name":"abnormal mitotic anaphase progression","termid":"FYPO:0000616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of mitotic anaphase B","synonyms":[{"name":"decreased duration of anaphase B during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic anaphase B during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic anaphase B progression","type":"exact"},{"name":"reduced duration of mitotic anaphase B","type":"exact"}],"termid":"FYPO:0007072"}


id: MONDO:1010951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial adenomatous polyposis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial adenomatous polyposis, non-human animal","termid":"MONDO:1010215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis, pig","secondary_identifiers":["OMIA:001916-9823"],"termid":"MONDO:1010951","xrefs":{"Monarch":{"xref_id":"1010951"}}}


id: MONDO:0009428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Childhood-onset hypophosphatasia is a rare, mildform of hypophosphatasia characterized by onset after six months of age and widely variable clinical features from low bone mineral density for age, to unexplained fractures,skeletal deformities,and rickets with short stature and waddling gait.","definition_xrefs":["Orphanet:247667"],"gene_count":0,"genotype_count":0,"name":"obsolete childhood hypophosphatasia (obsolete MONDO:0009428)","secondary_identifiers":["ICD10CM:E83.3","DOID:0110915","MESH:C562440","OMIM:241510","SCTID:30174008"],"synonyms":[{"name":"childhood-onset Rathburn disease","type":"exact"},{"name":"childhood-onset hypophosphatasia","type":"related"},{"name":"childhood-onset phosphoethanolaminuria","type":"exact"},{"name":"hypophosphatasia of childhood","type":"exact"},{"name":"hypophosphatasia, childhood","type":"related"},{"name":"obsolete childhood hypophosphatasia","type":"exact"},{"name":"pediatric hypophosphatasia","type":"exact"}],"termid":"MONDO:0009428","xrefs":{"Monarch":{"xref_id":"0009428"}}}


id: SO:1001282
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon signal for a UAG stop codon redefinition.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon_signal","termid":"SO:1001288"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UAG_stop_codon_signal","synonyms":[{"name":"UAG stop codon signal","type":"exact"}],"termid":"SO:1001282"}


id: PR:Q9Y7T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec59 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7T6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase sec59 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.10c","synonyms":[{"name":"Spom972h-sec59","type":"exact"}],"termid":"PR:Q9Y7T6"}


id: PBO:0072013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 15","termid":"PBO:0072013"}


id: PBO:0063579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PERP pseudogene 2","termid":"PBO:0063579"}


id: PBO:0030123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_L-canavanine","termid":"PBO:0030123"}


id: MONDO:1010528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, horse","secondary_identifiers":["OMIA:000197-9796"],"termid":"MONDO:1010528","xrefs":{"Monarch":{"xref_id":"1010528"}}}


id: MONDO:0003606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the adrenal medulla","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland cancer","termid":"MONDO:0002817"},{"relation_name":"is_a","term_name":"adrenal medulla neoplasm","termid":"MONDO:0021237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adrenal medulla cancer","secondary_identifiers":["GARD:5755","SCTID:371965009","MEDGEN:87485","NCIT:C4396","UMLS:C0344456","DOID:5719"],"synonyms":[{"name":"adrenal medulla cancer","type":"exact"},{"name":"adrenal medulla neoplasm","type":"broad"},{"name":"adrenal medulla tumor","type":"broad"},{"name":"adrenal medulla tumour","type":"broad"},{"name":"cancer of adrenal medulla","type":"exact"},{"name":"malignant adrenal medulla neoplasm","type":"exact"},{"name":"malignant adrenal medulla tumor","type":"exact"},{"name":"malignant adrenal medulla tumour","type":"exact"},{"name":"malignant neoplasm of adrenal medulla","type":"exact"},{"name":"malignant neoplasm of the adrenal medulla","type":"exact"},{"name":"malignant tumor of adrenal medulla","type":"exact"},{"name":"malignant tumor of the adrenal medulla","type":"exact"},{"name":"malignant tumour of adrenal medulla","type":"exact"},{"name":"malignant tumour of the adrenal medulla","type":"exact"}],"termid":"MONDO:0003606","xrefs":{"Monarch":{"xref_id":"0003606"}}}


id: GO:0103002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-hydroxypalmitate + NADP = H+ + 16-oxo-palmitate + NADPH.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"16-hydroxypalmitate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-9802"],"termid":"GO:0103002"}


id: PBO:0041361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4 binding protein beta","termid":"PBO:0041361"}


id: PBO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI family protein","termid":"PBO:0003346"}


id: GO:1903798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microRNA processing.","definition_xrefs":["GO_REF:0000058","GOC:BHF_miRNA","PMID:22269326","GOC:TermGenie","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA processing","termid":"GO:0070920"},{"relation_name":"regulates","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of miRNA processing","synonyms":[{"name":"regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"regulation of miRNA biogenesis","type":"related"},{"name":"regulation of miRNA maturation","type":"narrow"},{"name":"regulation of microRNA biogenesis","type":"related"},{"name":"regulation of microRNA biosynthesis","type":"related"},{"name":"regulation of microRNA biosynthetic process","type":"related"},{"name":"regulation of microRNA metabolic process","type":"related"},{"name":"regulation of microRNA metabolism","type":"related"},{"name":"regulation of microRNA processing","type":"broad"},{"name":"regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"}],"termid":"GO:1903798"}


id: GO:0071072
data:
  {"annotated_genes":["SJAG_01187","SJAG_00053","SJAG_03170","SJAG_01906","SJAG_03940","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109478,112492],"is_not":false,"summary":null,"term":"GO:0071072"},{"annotations":[90174,104133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[111120,115222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phospholipids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01187":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_03170":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phospholipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of phospholipid biosynthetic process","type":"exact"},{"name":"down-regulation of phospholipid biosynthetic process","type":"exact"},{"name":"downregulation of phospholipid biosynthetic process","type":"exact"},{"name":"inhibition of phospholipid biosynthetic process","type":"narrow"},{"name":"negative regulation of phospholipid anabolism","type":"exact"},{"name":"negative regulation of phospholipid biosynthesis","type":"exact"},{"name":"negative regulation of phospholipid formation","type":"exact"},{"name":"negative regulation of phospholipid synthesis","type":"exact"}],"termid":"GO:0071072","terms_by_termid":{"GO:0071072":null,"GO:1902647":null,"GO:2001211":null}}


id: PBO:0052133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 1","termid":"PBO:0052133"}


id: PATO:0002239
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape that inheres in the bearer by virtue of the bearer's nearly) symmetric shape wide at its ends and narrow in the middle, resembling the figure of number 8.","direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hourglass-shaped","synonyms":[{"name":"figure 8 shaped","type":"exact"}],"termid":"PATO:0002239"}


id: GO:0008490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arsenite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenite transmembrane transporter activity","termid":"GO:0015105"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"arsenite secondary active transmembrane transporter activity","secondary_identifiers":["GO:0008491"],"synonyms":[{"name":"arsenite porter activity","type":"related"}],"termid":"GO:0008490"}


id: GO:0071527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand that contributes to outflow tract morphogenesis.","definition_xrefs":["GOC:mah","PMID:15239959","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"},{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in outflow tract morphogenesis","synonyms":[{"name":"semaphorin-plexin signalling pathway involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:0071527"}


id: PATO:0001052
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is between 90 degrees and 180 degrees to another entity.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obtuse angle to","termid":"PATO:0001052"}


id: FYPO:0004166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of oxygen consumed by cells in a given time is higher than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased oxygen consumption during vegetative growth","synonyms":[{"name":"increased oxygen consumption during mitotic cell cycle","type":"related"},{"name":"increased oxygen uptake during vegetative growth","type":"related"}],"termid":"FYPO:0004166"}


id: GO:0051127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin nucleation","termid":"GO:0051125"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"positive regulation of actin nucleation","synonyms":[{"name":"activation of actin nucleation","type":"narrow"},{"name":"stimulation of actin nucleation","type":"narrow"},{"name":"up regulation of actin nucleation","type":"exact"},{"name":"up-regulation of actin nucleation","type":"exact"},{"name":"upregulation of actin nucleation","type":"exact"}],"termid":"GO:0051127"}


id: FYPO:0005308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 8 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H4-K8 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4-K8 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K8 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005308"}


id: MONDO:0036595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant sex cord-stromal tumor arising from the ovary. It is characterized by the presence of neoplastic Leydig cells. Signs and symptoms include hirsutism, menorrhagia and metrorrhagia. It may be associated with trisomy 8.","definition_xrefs":["NCIT:C2880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sertoli-stromal cell tumor","termid":"MONDO:0020807"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian Sertoli-Leydig cell tumor","secondary_identifiers":["MEDGEN:2038","UMLS:C0003810","SCTID:254866007"],"synonyms":[{"name":"Sertoli-Leydig cell tumor of ovary","type":"exact"},{"name":"Sertoli-Leydig cell tumor of the ovary","type":"exact"},{"name":"Sertoli-Leydig cell tumour of ovary","type":"exact"},{"name":"Sertoli-Leydig cell tumour of the ovary","type":"exact"},{"name":"Sertoli-Leydig neoplasm of ovary","type":"exact"},{"name":"Sertoli-Leydig neoplasm of the ovary","type":"exact"},{"name":"androblastoma","type":"exact"},{"name":"arrhenoblastoma","type":"exact"},{"name":"ovarian Sertoli-Leydig cell neoplasm","type":"exact"},{"name":"ovarian Sertoli-Leydig cell tumor","type":"exact"}],"termid":"MONDO:0036595","xrefs":{"Monarch":{"xref_id":"0036595"}}}


id: PBO:0117111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX1 antisense RNA 2","termid":"PBO:0117111"}


id: SO:0002386
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a stop codon in an upstream open reading frame is introduced, moved or lost.","direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_variant","termid":"SO:0002385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_stop_codon_variant","synonyms":[{"name":"uFrameshift","type":"exact"}],"termid":"SO:0002386"}


id: GO:0015545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bicyclomycin from one side of a membrane to the other. Bicyclomycin (or bicozamycin) is an antibacterial drug often used as a livestock feed additive.","definition_xrefs":["ISBN:091191028X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"bicyclomycin transmembrane transporter activity","synonyms":[{"name":"bicyclomycin transporter activity","type":"related"},{"name":"bicyclomycin/sulfathiazole:hydrogen antiporter activity","type":"related"}],"termid":"GO:0015545"}


id: PBO:0043826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPS1 intronic transcript 1","termid":"PBO:0043826"}


id: MONDO:0007314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemodectoma, intraabdominal, with cutaneous angiolipomas","secondary_identifiers":["MESH:C535552","UMLS:C2930928","MEDGEN:443934","OMIM:118350"],"synonyms":[{"name":"abdominal chemodectomas with cutaneous angiolipomas","type":"related"},{"name":"chemodectoma, intraabdominal, with cutaneous angiolipomas","type":"exact"}],"termid":"MONDO:0007314","xrefs":{"Monarch":{"xref_id":"0007314"}}}


id: FYPO:0003174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleotide-excision repair is normal (i.e. indistinguishable from wild type) during a cellular response to ultraviolet light. Nucleotide-excision repair is a DNA repair process in which a small region of the strand surrounding the damage is removed as an oligonucleotide, and the resulting small gap is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["GO:0006289","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleotide-excision repair during cellular response to UV","synonyms":[{"name":"normal NER during cellular response to UV","type":"exact"},{"name":"normal excision repair during cellular response to UV","type":"broad"},{"name":"normal nucleotide-excision repair during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal nucleotide-excision repair during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal nucleotide-excision repair during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0003174"}


id: FYPO:0004865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form astral microtubules that are longer than normal during anaphase A. Anaphase A is the stage of mitosis in which the kinetochore microtubules shorten as chromosomes move toward the spindle poles.","definition_xrefs":["PomBase:mah","GO:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long astral microtubules","termid":"FYPO:0004612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"long astral microtubules during mitotic anaphase A","synonyms":[{"name":"elongated astral microtubules during mitotic anaphase A","type":"exact"},{"name":"long astral microtubules during anaphase A during mitotic cell cycle","type":"related"},{"name":"long astral microtubules during mitotic anaphase A during vegetative growth","type":"exact"},{"name":"long cytoplasmic astral microtubules during mitotic anaphase A","type":"exact"}],"termid":"FYPO:0004865"}


id: GO:0006420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. The arginyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of an alanine accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"arginyl-tRNA aminoacylation","termid":"GO:0006420"}


id: MONDO:0016053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated cerebellar vermis hypoplasia is a rare, non-syndromic cerebellar malformation characterized by an underdeveloped cerebellar vermis. Patients may present a variable phenotype ranging from normal neurodevelopment to motor and/or language delay, variable degrees of cognitive impairment, hypotonia, equilibrium disturbances, static/dynamic ataxia, oculomotor abnormalities, epilepsy and/or clumsiness. Behavioral disorders such as attention deficit hyperactivity disorder and generalized anxiety have also been reported. Brain MRI may reveal diffuse or selective (mostly posterior) vermian cerebellar hypoplasia and EEG may show focal paroxysms.","definition_xrefs":["Orphanet:199630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated cerebellar vermis hypoplasia","secondary_identifiers":["MEDGEN:1638500","UMLS:C4707794","GARD:20337","SCTID:766709000"],"termid":"MONDO:0016053","xrefs":{"Monarch":{"xref_id":"0016053"}}}


id: PBO:0070050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 7, pseudogene","termid":"PBO:0070050"}


id: PBO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Pep5/Vps11-like (predicted)","termid":"PBO:0001872"}


id: GO:0014708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of somitomeric trunk muscle development.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"}


id: GO:0051348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transferase activity","synonyms":[{"name":"down regulation of transferase activity","type":"exact"},{"name":"down-regulation of transferase activity","type":"exact"},{"name":"downregulation of transferase activity","type":"exact"},{"name":"inhibition of transferase activity","type":"narrow"},{"name":"transferase inhibitor","type":"exact"}],"termid":"GO:0051348"}


id: GO:0072467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that occurs in response to signals generated as a result of cell shape checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete response to cell shape checkpoint signaling (obsolete GO:0072467)","synonyms":[{"name":"cell shape checkpoint effector process","type":"exact"},{"name":"response to signal involved in cell shape checkpoint","type":"exact"}],"termid":"GO:0072467"}


id: GO:0080082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in esculin.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"esculin beta-glucosidase activity","termid":"GO:0080082"}


id: MONDO:0003161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign ependymoma (obsolete MONDO:0003161)","termid":"MONDO:0003161","xrefs":{"Monarch":{"xref_id":"0003161"}}}


id: PBO:0081201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN2 divergent transcript","termid":"PBO:0081201"}


id: GO:1902571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["PMID:20179351","GOC:krc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of serine-type peptidase activity (obsolete GO:1902571)","synonyms":[{"name":"regulation of serine protease activity","type":"narrow"}],"termid":"GO:1902571"}


id: MONDO:0020213
data:
  {"annotated_genes":["SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007376"}]},"cv_name":"mondo","definition":"The stromal corneal dystrophies refer to a group of rare genetically determined corneal dystrophies (CDs) characterized by lesions affecting the corneal stroma, and variable effects on vision depending on the type of dystrophy.","definition_xrefs":["Orphanet:98626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"stromal corneal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0038457","GARD:19519","DOID:0060442","icd11.foundation:1392780216","ICD9:371.56","MEDGEN:20973","SCTID:231931001"],"synonyms":[{"name":"corneal dystrophy (disease) of substantia propria of cornea","type":"exact"},{"name":"corneal stromal dystrophy","type":"exact"},{"name":"stromal dystrophy","type":"related"},{"name":"substantia propria of cornea corneal dystrophy (disease)","type":"exact"}],"termid":"MONDO:0020213","terms_by_termid":{"MONDO:0007376":null},"xrefs":{"Monarch":{"xref_id":"0020213"}}}


id: FYPO:0003447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glycosylated protein measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of glycosylated protein in cell","synonyms":[{"name":"decreased accumulation of glycosylated protein in cell","type":"related"},{"name":"decreased cellular glycoprotein level","type":"exact"},{"name":"decreased glycosylated protein level during vegetative growth","type":"exact"},{"name":"decreased level of glycosylated protein in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of glycosylated protein in cell during vegetative growth","type":"exact"},{"name":"reduced level of glycosylated protein in cell","type":"exact"}],"termid":"FYPO:0003447"}


id: PBO:0017456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inheres_in_part_of","termid":"PBO:0017456"}


id: PBO:0040197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 10","termid":"PBO:0040197"}


id: GO:0002823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains. An example of this process is found in the Gnathostomata.","definition_xrefs":["GOC:mtg_sensu","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response","termid":"GO:0002820"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"negatively_regulates","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"}


id: PBO:0065359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1","termid":"PBO:0065359"}


id: PBO:0089484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, MADS-box Mbx1","termid":"PBO:0089484"}


id: PBO:0027544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_latrunculin_A","termid":"PBO:0027544"}


id: MONDO:0006051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postweaning multisystemic wasting syndrome (obsolete MONDO:0006051)","termid":"MONDO:0006051","xrefs":{"Monarch":{"xref_id":"0006051"}}}


id: PBO:0072497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 26","termid":"PBO:0072497"}


id: PBO:0076938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuftelin interacting protein 11","termid":"PBO:0076938"}


id: PBO:0071586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 2","termid":"PBO:0071586"}


id: MONDO:0009679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"},{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"arthrogryposis due to muscular dystrophy","secondary_identifiers":["DOID:0110631","GARD:779","Orphanet:1155","MESH:C564985","MEDGEN:342608","OMIM:253900","UMLS:C1850865"],"synonyms":[{"name":"congenital muscular dystrophy producing arthrogryposis","type":"exact"},{"name":"muscular dystrophy, congenital, producing arthrogryposis","type":"related"}],"termid":"MONDO:0009679","xrefs":{"Monarch":{"xref_id":"0009679"}}}


id: GO:1904625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycine secretion, neurotransmission.","definition_xrefs":["GO_REF:0000058","PMID:22988142","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission, glycinergic","termid":"GO:0060093"},{"relation_name":"is_a","term_name":"regulation of glycine secretion, neurotransmission","termid":"GO:1904624"},{"relation_name":"negatively_regulates","term_name":"glycine secretion, neurotransmission","termid":"GO:0061537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glycine secretion, neurotransmission","synonyms":[{"name":"down regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"down-regulation of glycine secretion, neurotransmission","type":"exact"},{"name":"downregulation of glycine secretion, neurotransmission","type":"exact"},{"name":"inhibition of glycine secretion, neurotransmission","type":"narrow"}],"termid":"GO:1904625"}


id: MONDO:0010300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 53","secondary_identifiers":["UMLS:C1845889","GARD:22672","MEDGEN:335296","MESH:C564533","DOID:0112047","OMIM:300324"],"synonyms":[{"name":"MRX53","type":"exact"},{"name":"intellectual disability, X-linked 53","type":"exact"},{"name":"mental retardation, X-linked 53","type":"related"},{"name":"mental retardation, X-linked 53, X-linked recessive","type":"exact"}],"termid":"MONDO:0010300","xrefs":{"Monarch":{"xref_id":"0010300"}}}


id: GO:0006408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of snRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"snRNA transport","termid":"GO:0051030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"snRNA export from nucleus","synonyms":[{"name":"snRNA export from cell nucleus","type":"exact"},{"name":"snRNA export out of nucleus","type":"exact"},{"name":"snRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"snRNA-nucleus export","type":"exact"}],"termid":"GO:0006408"}


id: MONDO:0015430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 1 syndrome is an autosomal anomaly characterized by variable clinical features, most commonly including significant intrauterine and postnatal growth failure, developmental delay, intellectual disability, microcephaly, and dysmorphic facial features. Some less frequent clinical features are dysgenesis of corpus callosum, atrial septal defect, rocker bottom feet and clinodactyly.","definition_xrefs":["Orphanet:1437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 1 disorder","termid":"MONDO:0700008"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 1","secondary_identifiers":["SCTID:47017007","GTR:AN0102272","MESH:C535361","UMLS:C0265395","GARD:1320","MEDGEN:539215","NCIT:C36474"],"synonyms":[{"name":"R1","type":"related"},{"name":"Ring 1","type":"exact"},{"name":"Ring chromosome 1 syndrome","type":"related"},{"name":"Ring chromosome type 1","type":"exact"},{"name":"chromosome 1 ring","type":"related"},{"name":"chromosome 1, ring","type":"related"},{"name":"r(1) syndrome","type":"exact"}],"termid":"MONDO:0015430","xrefs":{"Monarch":{"xref_id":"0015430"}}}


id: PBO:0079366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha like 3","termid":"PBO:0079366"}


id: PBO:0084121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme-dependent repressor of hypoxic genes; mediates aerobic transcriptional repression of hypoxia induced genes such as COX5b and CYC7; repressor function regulated through decreased promoter occupancy in response to oxidative stress; contains an HMG domain that is responsible for DNA bending activity; involved in the hyperosmotic stress resistance","termid":"PBO:0084121"}


id: SO:1000119
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000119 sequence_variant_causing_inactive_ligand_binding_site (obsolete SO:1000119)","synonyms":[{"name":"mutation causing inactive ligand binding site","type":"related"},{"name":"sequence variant causing inactive ligand binding site","type":"exact"}],"termid":"SO:1000119"}


id: PBO:0082437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B subunit of DNA polymerase alpha-primase complex; required for initiation of DNA replication during mitotic and premeiotic DNA synthesis; also functions in telomere capping and length regulation","termid":"PBO:0082437"}


id: PBO:0011064
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in fungi","termid":"PBO:0011064"}


id: PBO:0041993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 39","termid":"PBO:0041993"}


id: GO:0019408
data:
  {"annotated_genes":["SJAG_04954","SJAG_00554","SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71751,74235,99768],"is_not":false,"summary":null,"term":"GO:0019408"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol biosynthetic process","termid":"GO:0016094"},{"relation_name":"is_a","term_name":"dolichol metabolic process","termid":"GO:0019348"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_02163":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"dolichol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dolichol anabolism","type":"exact"},{"name":"dolichol biosynthesis","type":"exact"},{"name":"dolichol formation","type":"exact"},{"name":"dolichol synthesis","type":"exact"}],"termid":"GO:0019408","terms_by_termid":{"GO:0019408":null}}


id: PBO:0067224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 293, pseudogene","termid":"PBO:0067224"}


id: PBO:0080050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP21 pseudogene 2","termid":"PBO:0080050"}


id: PATO:0001478
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being broken down; caved in.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collapsed","termid":"PATO:0001478"}


id: GO:0075246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oospore formation, a process in which male and female gametangia develop and fuse to form a thick-walled resting spore of oomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043942"},{"relation_name":"is_a","term_name":"regulation of oospore formation","termid":"GO:0075244"},{"relation_name":"negatively_regulates","term_name":"oospore formation","termid":"GO:0075243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of oospore formation","termid":"GO:0075246"}


id: GO:0031996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thioesterase.","definition_xrefs":["GOC:dl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"thioesterase binding","synonyms":[{"name":"thiolesterase binding","type":"exact"}],"termid":"GO:0031996"}


id: PBO:0078905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 14-1","termid":"PBO:0078905"}


id: PBO:0061783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occludin","termid":"PBO:0061783"}


id: MONDO:0018303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete generalized isolated dystonia (obsolete MONDO:0018303)","termid":"MONDO:0018303","xrefs":{"Monarch":{"xref_id":"0018303"}}}


id: PBO:0080606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 43","termid":"PBO:0080606"}


id: PBO:0050752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 14","termid":"PBO:0050752"}


id: PBO:0046743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 2","termid":"PBO:0046743"}


id: MONDO:0012888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any sarcoidosis in which the cause of the disease is a mutation in the BTNL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoidosis, susceptibility to, 2","secondary_identifiers":["UMLS:C2676468","MEDGEN:436694","OMIM:612387"],"synonyms":[{"name":"BTNL2 sarcoidosis","type":"exact"},{"name":"SS2","type":"related"},{"name":"sarcoidosis caused by mutation in BTNL2","type":"exact"},{"name":"sarcoidosis, susceptibility to, 2","type":"exact"},{"name":"sarcoidosis, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to sarcoidosis 2","type":"related"}],"termid":"MONDO:0012888","xrefs":{"Monarch":{"xref_id":"0012888"}}}


id: MONDO:0009348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classical Hodgkin lymphoma (CHL) is a B-cell lymphoma characterized histologically by the presence of large mononuclear Hodgkin cells and multinucleated Reed-Sternberg (HRS) cells.","definition_xrefs":["Orphanet:391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hodgkins lymphoma","termid":"MONDO:0004952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"classic Hodgkin lymphoma","secondary_identifiers":["UMLS:C0019829","GARD:16529","MEDGEN:9283","NCIT:C7164","OMIM:236000","icd11.foundation:1616050398","ONCOTREE:CHL"],"synonyms":[{"name":"Chl","type":"related"},{"name":"Hodgkin disease","type":"related"},{"name":"Hodgkin lymphoma, susceptibility to","type":"related"},{"name":"classic Hodgkin disease","type":"exact"},{"name":"classical Hodgkin lymphoma","type":"exact"},{"name":"classical Hodgkin's lymphoma","type":"exact"},{"name":"lymphoma, Hodgkin, classic","type":"related"}],"termid":"MONDO:0009348","xrefs":{"Monarch":{"xref_id":"0009348"}}}


id: FYPO:0004921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of a protein kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:11402029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of catalytic activity","termid":"FYPO:0004920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal positive regulation of protein kinase activity","synonyms":[{"name":"normal activation of protein kinase activity","type":"narrow"},{"name":"normal positive regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"normal positive regulation of protein kinase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004921"}


id: GO:0042327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"positively_regulates","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphorylation","synonyms":[{"name":"activation of phosphorylation","type":"narrow"},{"name":"stimulation of phosphorylation","type":"narrow"},{"name":"up regulation of phosphorylation","type":"exact"},{"name":"up-regulation of phosphorylation","type":"exact"},{"name":"upregulation of phosphorylation","type":"exact"}],"termid":"GO:0042327"}


id: PBO:0068685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 66, pseudogene","termid":"PBO:0068685"}


id: PBO:0077962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 15-1","termid":"PBO:0077962"}


id: MONDO:0012574
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85326],"is_not":false,"summary":null,"term":"MONDO:0012574"}]},"cv_name":"mondo","definition":"17p11.2 microduplication syndrome is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 17, typically characterized by hypotonia, poor feeding, failure to thrive, developmental delay (particularly cognitive and language deficits), mild-moderate intellectual deficit, and neuropsychiatric disorders (behavioral problems, anxiety, attention deficit hyperactivity disorder, autistic spectrum disorder, bipolar disorder). Structural cardiovascular anomalies (dilated aortic root, bicommissural aortic valve, atrial/ventricular and septal defects) and sleep disturbance (obstructive and central sleep apnea) are also frequently associated.","definition_xrefs":["Orphanet:1713"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 17","termid":"MONDO:0016950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"Potocki-Lupski syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:610883","UMLS:C2931246","DOID:0060853","GARD:10145","DECIPHER:19","NCIT:C124846","SCTID:734016004","icd11.foundation:1720095972","MEDGEN:444010"],"synonyms":[{"name":"17p11.2 Duplication syndrome","type":"exact"},{"name":"17p11.2 microduplication syndrome","type":"exact"},{"name":"Duplication 17p11.2 syndrome","type":"related"},{"name":"PTLS","type":"related"},{"name":"Potocki-Lupski syndrome","type":"exact"},{"name":"Potocki-Lupski syndrome (dup(17)(p11.2p11.2))","type":"related"},{"name":"Potocki-Lupski syndrome, Isolated cases","type":"exact"},{"name":"chromosome 17P11.2 Duplication syndrome","type":"related"},{"name":"chromosome 17p11.2 duplication syndrome","type":"exact"},{"name":"trisomy 17p11.2","type":"exact"}],"termid":"MONDO:0012574","terms_by_termid":{"MONDO:0012574":null},"xrefs":{"Monarch":{"xref_id":"0012574"}}}


id: PR:Q10082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.03c","synonyms":[{"name":"Spom972h-SPAC11D3.03c","type":"exact"}],"termid":"PR:Q10082"}


id: PBO:0077153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 3B","termid":"PBO:0077153"}


id: PBO:0057863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3174","termid":"PBO:0057863"}


id: GO:0120278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cerebral blood circulation.","definition_xrefs":["GOC:krc","PMID:25397684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cerebral blood circulation","termid":"GO:0120276"},{"relation_name":"is_a","term_name":"negative regulation of blood circulation","termid":"GO:1903523"},{"relation_name":"negatively_regulates","term_name":"cerebral blood circulation","termid":"GO:0120275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cerebral blood circulation","synonyms":[{"name":"down regulation of cerebral blood circulation","type":"exact"},{"name":"down-regulation of cerebral blood circulation","type":"exact"},{"name":"downregulation of cerebral blood circulation","type":"exact"},{"name":"inhibition of cerebral blood circulation","type":"narrow"},{"name":"negative regulation of cerebrum blood circulation","type":"exact"},{"name":"negative regulation of telencephalon blood circulation","type":"exact"}],"termid":"GO:0120278"}


id: PR:O14138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25A8.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.03c","synonyms":[{"name":"Spom972h-SPAC25A8.03c","type":"exact"},{"name":"protein midA homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14138"}


id: PBO:0030809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_horsetail_movement","termid":"PBO:0030809"}


id: PBO:0058843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8072","termid":"PBO:0058843"}


id: PBO:0051087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma P (non-functional)","termid":"PBO:0051087"}


id: MONDO:0003145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system embryonal tumor, not otherwise specified arising from the supratentorial region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supratentorial cancer","termid":"MONDO:0002071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supratentorial primitive neuroectodermal tumor","secondary_identifiers":["DOID:4791","SCTID:699318007","ICD9:209.30","MEDGEN:234914","NCIT:C6968","UMLS:C1336538"],"synonyms":[{"name":"CNS/supratentorial PNET","type":"exact"},{"name":"supratent. primitive neuro. tumor","type":"exact"},{"name":"supratent. primitive neuro. tumour","type":"exact"},{"name":"supratentorial PNET","type":"exact"},{"name":"supratentorial primitive neuroectodermal tumor","type":"exact"}],"termid":"MONDO:0003145","xrefs":{"Monarch":{"xref_id":"0003145"}}}


id: PBO:0057584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 889","termid":"PBO:0057584"}


id: PBO:0040562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B4GALNT2 pseudogene 1","termid":"PBO:0040562"}


id: FYPO:0006694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 occurs to a lower extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during G0","termid":"FYPO:0003871"},{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K4 trimethylation during G0","synonyms":[{"name":"decreased histone H3 K4 trimethylation during G0","type":"exact"},{"name":"decreased histone H3-K4 trimethylation during cell quiescence","type":"exact"},{"name":"decreased histone H3-K4 trimethylation during quiescence","type":"exact"},{"name":"decreased histone H3K4 trimethylation during G0","type":"exact"},{"name":"decreased histone H3K4me3 during G0","type":"exact"},{"name":"decreased histone lysine H3 K4 trimethylation during G0","type":"exact"},{"name":"reduced histone H3-K4 trimethylation during G0","type":"exact"}],"termid":"FYPO:0006694"}


id: MONDO:0034943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated vitreoretinopathy (obsolete MONDO:0034943)","secondary_identifiers":["Orphanet:519304"],"termid":"MONDO:0034943","xrefs":{"Monarch":{"xref_id":"0034943"}}}


id: MONDO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial dna depletion syndrome 16B (neuroophthalmic type)","secondary_identifiers":["MEDGEN:1780329","DOID:0070447","OMIM:619425","UMLS:C5543632"],"synonyms":[{"name":"MTDPS16B","type":"exact"},{"name":"mitochondrial dna depletion syndrome 16B (neuroophthalmic type)","type":"exact"}],"termid":"MONDO:0030326","xrefs":{"Monarch":{"xref_id":"0030326"}}}


id: GO:0016145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside metabolic process","termid":"GO:0016143"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"glycosyl compound catabolic process","termid":"GO:1901658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"S-glycoside catabolic process","synonyms":[{"name":"S-glycoside breakdown","type":"exact"},{"name":"S-glycoside catabolism","type":"exact"},{"name":"S-glycoside degradation","type":"exact"},{"name":"thioglycoside catabolic process","type":"exact"},{"name":"thioglycoside catabolism","type":"exact"}],"termid":"GO:0016145"}


id: PR:Q9P7X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP23A10.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7X4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein P23A10.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.11c","synonyms":[{"name":"Spom972h-SPBP23A10.11c","type":"exact"}],"termid":"PR:Q9P7X4"}


id: MONDO:0008007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dental ankylosis is a rare disorder characterized by the fusion of the tooth to the bone, preventing both eruption and orthodontic movement.","definition_xrefs":["Orphanet:1077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"},{"relation_name":"is_a","term_name":"ankylosis","termid":"MONDO:0002257"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth ankylosis","secondary_identifiers":["SCTID:14901003","DOID:12661","GARD:701","OMIM:157950","ICD9:521.6","icd11.foundation:2066427602","MESH:D020254","UMLS:C0155930","MEDGEN:57843","MedDRA:10044019"],"synonyms":[{"name":"abnormal fusion of dental cementum with alveolar bone","type":"related"},{"name":"ankylosis (disease) of calcareous tooth","type":"exact"},{"name":"ankylosis of teeth","type":"exact"},{"name":"ankylosis of tooth","type":"exact"},{"name":"calcareous tooth ankylosis (disease)","type":"exact"},{"name":"dental ankylosis","type":"related"},{"name":"molar 1 reinclusion","type":"related"},{"name":"molar I reinclusion","type":"related"},{"name":"permanent molars, secondary retention OF","type":"related"},{"name":"secondary retention of permanent molars","type":"related"}],"termid":"MONDO:0008007","xrefs":{"Monarch":{"xref_id":"0008007"}}}


id: MONDO:0013262
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85944,85945],"is_not":false,"summary":null,"term":"MONDO:0013262"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the MYH7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1S","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C563538","UMLS:C1834481","DOID:0110454","OMIM:613426","GARD:12832","MEDGEN:371831"],"synonyms":[{"name":"CMD1S","type":"exact"},{"name":"MYH7 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1S","type":"related"},{"name":"cardiomyopathy, dilated, type 1S","type":"exact"},{"name":"dilated cardiomyopathy type 1S","type":"exact"},{"name":"dilated cardiomyopathy-1S","type":"related"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in MYH7","type":"exact"},{"name":"left ventricular noncompaction 5","type":"related"}],"termid":"MONDO:0013262","terms_by_termid":{"MONDO:0013262":null},"xrefs":{"Monarch":{"xref_id":"0013262"}}}


id: GO:0102486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dCTP + 2 H2O = dCMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dCTP phosphohydrolase activity (obsolete GO:0102486)","termid":"GO:0102486"}


id: PBO:0034334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_contributes_to","termid":"PBO:0034334"}


id: GO:0052579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,4S)-menthone + NADP+ = (R)-pulegone + H+ + NADPH. Also converts (2R,5R)-isomenthone into (R)-pulegone.","definition_xrefs":["EC:1.3.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(+)-pulegone reductase (NADP+) activity","synonyms":[{"name":"(+)-isomenthone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052579"}


id: GO:0106158
data:
  {"annotated_genes":["SJAG_03154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111734],"is_not":false,"summary":null,"term":"GO:0106158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction:acyl-CoA + glycerophosphocholine = CoA + 1-acyl-sn-glycero-3-phosphocholine.","definition_xrefs":["PMID:27758859","RHEA:58476","PMID:18430972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycero-3-phosphocholine acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPACT activity","type":"exact"},{"name":"glycerophosphocholine O-acyltransferase activity","type":"exact"}],"termid":"GO:0106158","terms_by_termid":{"GO:0106158":null}}


id: MONDO:0011866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the VRK1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 1","termid":"MONDO:0016396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0005066","MONDO:0006025","MONDO:0037792","MONDO:0005559"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 1A","secondary_identifiers":["GARD:15416","MEDGEN:335969","UMLS:C1843504","OMIM:607596","DOID:0060265"],"synonyms":[{"name":"PCH1A","type":"related"},{"name":"Pch1","type":"related"},{"name":"VRK1 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in VRK1","type":"exact"},{"name":"pontocerebellar hypoplasia with anterior horn cell disease","type":"related"},{"name":"pontocerebellar hypoplasia with infantile spinal muscular atrophy","type":"related"},{"name":"pontocerebellar hypoplasia, type 1A","type":"related"}],"termid":"MONDO:0011866","xrefs":{"Monarch":{"xref_id":"0011866"}}}


id: PBO:0050327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 29","termid":"PBO:0050327"}


id: MONDO:0012134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"juvenile myoclonic epilepsy","termid":"MONDO:0009696"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonic epilepsy, juvenile, susceptibility to, 3","secondary_identifiers":["DOID:0111326","MEDGEN:324732","OMIM:608816","UMLS:C1837308"],"synonyms":[{"name":"EJM3","type":"exact"},{"name":"epilepsy, juvenile myoclonic 3","type":"exact"},{"name":"myoclonic epilepsy, juvenile, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0012134","xrefs":{"Monarch":{"xref_id":"0012134"}}}


id: GO:0044460
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a flagellum, a long whiplike or feathery structure borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellum part (obsolete GO:0044460)","synonyms":[{"name":"flagellum component","type":"exact"},{"name":"flagellum part","type":"exact"}],"termid":"GO:0044460"}


id: PBO:0052634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 2","termid":"PBO:0052634"}


id: GO:0070754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-35 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-35 production","termid":"GO:0070753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-35 production","secondary_identifiers":["GO:0070750"],"synonyms":[{"name":"regulation of IL-35 production","type":"exact"},{"name":"regulation of interleukin-35 biosynthetic process","type":"narrow"}],"termid":"GO:0070754"}


id: GO:0036028
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and thrombin (F2); formation of the complex inhibits the serine protease activity of thrombin.","definition_xrefs":["PMID:6323392","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein C inhibitor-thrombin complex","synonyms":[{"name":"PCI-thrombin complex","type":"exact"},{"name":"SERPINA5-thrombin complex","type":"exact"},{"name":"plasma serine protease inhibitor-thrombin complex","type":"exact"},{"name":"protein C inhibitor-F2 complex","type":"exact"},{"name":"protein C inhibitor-coagulation factor II complex","type":"exact"},{"name":"serpin A5-thrombin complex","type":"exact"}],"termid":"GO:0036028"}


id: PBO:0086135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for meiotic recombination and gene conversion; null mutant displays reduced PIS1 expression and growth defects on non-fermentable carbon sources and minimal media; GFP-fusion protein localizes to both cytoplasm and nucleus","termid":"PBO:0086135"}


id: GO:1901149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to salicylic acid.","definition_xrefs":["GOC:TermGenie","PMID:22699612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"salicylic acid binding","synonyms":[{"name":"salicylic acid receptor","type":"narrow"}],"termid":"GO:1901149"}


id: PBO:0003900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron sulfur cluster assembly protein (predicted)","termid":"PBO:0003900"}


id: PBO:0050953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon gamma","termid":"PBO:0050953"}


id: PBO:0069442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 707, pseudogene","termid":"PBO:0069442"}


id: PBO:0026717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell","termid":"PBO:0026717"}


id: PBO:0069881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1169, pseudogene","termid":"PBO:0069881"}


id: PBO:0081409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 257","termid":"PBO:0081409"}


id: PBO:0050322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 24","termid":"PBO:0050322"}


id: PBO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Batten's disease","termid":"PBO:0001312"}


id: PBO:0060192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC12 antisense RNA 1","termid":"PBO:0060192"}


id: GO:1901931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-copaene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene biosynthetic process","termid":"GO:0051762"},{"relation_name":"is_a","term_name":"alpha-copaene metabolic process","termid":"GO:1901929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-copaene biosynthetic process","synonyms":[{"name":"alpha-copaene anabolism","type":"exact"},{"name":"alpha-copaene biosynthesis","type":"exact"},{"name":"alpha-copaene formation","type":"exact"},{"name":"alpha-copaene synthesis","type":"exact"}],"termid":"GO:1901931"}


id: PBO:0066189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 11 pseudogene 1","termid":"PBO:0066189"}


id: GO:0018827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-chloro-2,2-bis(4-chlorophenyl)ethane = HCl + unsym-bis(4-chlorophenyl)ethene. 1-chloro-2,2-bis(4-chlorophenyl)ethane is also known as DDMS; unsym-bis(4-chlorophenyl)ethene is also known as DDNU.","definition_xrefs":["UM-BBD_reactionID:r0515"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-chloro-2,2-bis(4-chlorophenyl)ethane dehydrochlorinase activity (obsolete GO:0018827)","synonyms":[{"name":"DDMS dehydrochlorinase activity","type":"exact"}],"termid":"GO:0018827"}


id: PBO:0024801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in","termid":"PBO:0024801"}


id: PBO:0053114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 1 pseudogene 1","termid":"PBO:0053114"}


id: GO:0035850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an epithelial cell that characterize the cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","GOC:bf","PMID:16216236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"}


id: GO:0102157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-3-sulfopropanediol(1-) + NAD = 2-oxo-3-hydroxy-propane-1-sulfonate + NADH + H+.","definition_xrefs":["PMID:20150239","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(R)-sulfopropanediol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-11729"],"termid":"GO:0102157"}


id: GO:0010283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pinoresinol + NADPH + H+ = lariciresinol + NADP+.","definition_xrefs":["PMID:10066819","PMID:7592828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, reducing C-O-C group as acceptor","termid":"GO:0120546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pinoresinol reductase activity","termid":"GO:0010283"}


id: PBO:0072673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA transcription, translation and transport factor","termid":"PBO:0072673"}


id: GO:0072526
data:
  {"annotated_genes":["SJAG_00461","SJAG_03828","SJAG_03091","SJAG_05314","SJAG_02785","SJAG_00605","SJAG_02796","SJAG_02369","SJAG_04495","SJAG_03660","SJAG_02135","SJAG_06621","SJAG_00027","SJAG_01543","SJAG_06622","SJAG_03373","SJAG_02945","SJAG_00685","SJAG_02107","SJAG_03903","SJAG_01310","SJAG_04192","SJAG_04048","SJAG_04334","SJAG_02009","SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77638,105218,109147,97749,98022,103136,109145,116092,94284,94773,105588,105219,105587,103393,109143,109144,105217,109146,109142,109141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[72164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[72167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[72857,75818],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[69868],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[100627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyridine-containing compound, i.e. any compound that contains pyridine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01543":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridine-containing compound catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine and derivative catabolic process","type":"exact"},{"name":"pyridine-containing compound breakdown","type":"exact"},{"name":"pyridine-containing compound catabolism","type":"exact"},{"name":"pyridine-containing compound degradation","type":"exact"}],"termid":"GO:0072526","terms_by_termid":{"GO:0006110":null,"GO:0006742":null,"GO:0019677":null,"GO:0042820":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: PBO:0064888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2R2B intronic transcript 1","termid":"PBO:0064888"}


id: GO:0014883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of fast-contracting muscle fibers to a slower character. This may involve slowing of contractile rate, slow myosin gene induction, increase in oxidative metabolic properties, altered electrophysiology and altered innervation. This process also regulates skeletal muscle adapatation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle adaptation","termid":"GO:0014733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transition between fast and slow fiber","synonyms":[{"name":"transition between fast and slow fibre","type":"exact"},{"name":"transition fast-slow fiber","type":"exact"},{"name":"transition fast-slow fibre","type":"exact"}],"termid":"GO:0014883"}


id: MONDO:0017504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"apodia","termid":"MONDO:0017446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"apodia, unilateral","secondary_identifiers":["icd11.foundation:1499762342","Orphanet:295105"],"synonyms":[{"name":"congenital absence of foot, unilateral","type":"exact"}],"termid":"MONDO:0017504","xrefs":{"Monarch":{"xref_id":"0017504"}}}


id: MONDO:0800029
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[84838],"is_not":false,"summary":null,"term":"MONDO:0800029"}]},"cv_name":"mondo","definition":"A nonneoplastic pulmonary disease that is characterized by the formation of scar tissue within the lungs in the absence of any known cause.","definition_xrefs":["Orphanet:2032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"},{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"},{"relation_name":"is_a","term_name":"inherited interstitial lung disease","termid":"MONDO:0031199"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"interstitial lung disease 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8609","OMIM:178500","MESH:D054990","ICD10CM:J84.112","NCIT:C35716","ICD9:516.31","MEDGEN:1794136","NORD:1296","SCTID:196125002","DOID:0060971","UMLS:C5561926","MedDRA:10021240"],"synonyms":[{"name":"CFA","type":"exact"},{"name":"Hamman-rich disease","type":"narrow"},{"name":"ILD2","type":"exact"},{"name":"IPF","type":"exact"},{"name":"Idiopathic Pulmonary Fibrosis","type":"exact"},{"name":"UIP","type":"exact"},{"name":"cryptogenic fibrosing alveolitis","type":"exact"},{"name":"familial idiopathic pulmonary fibrosis","type":"related"},{"name":"fibrocystic pulmonary dysplasia","type":"exact"},{"name":"fibrosing alveolitis","type":"related"},{"name":"fibrosing alveolitis, cryptogenic","type":"exact"},{"name":"idiopathic pulmonary fibrosis, familial","type":"exact"},{"name":"interstitial pneumonitis, usual","type":"exact"},{"name":"pulmonary fibrosis, idiopathic","type":"related"},{"name":"usual interstitial pneumonia","type":"exact"}],"termid":"MONDO:0800029","terms_by_termid":{"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0800029"}}}


id: PBO:0056371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8","termid":"PBO:0056371"}


id: SO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_secondary_structure","synonyms":[{"name":"INSDC_feature:misc_structure","type":"exact"},{"name":"sequence secondary structure","type":"exact"}],"termid":"SO:0000002"}


id: MONDO:0020436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect, sinus venosus type","secondary_identifiers":["GARD:10696","NANDO:2200267","MEDGEN:138011","Orphanet:99105","SCTID:95268002","UMLS:C0344730","icd11.foundation:1930019148","MESH:C548009"],"synonyms":[{"name":"ASD, sinus venosus type","type":"exact"},{"name":"atrial septal defect sinus venosus","type":"related"},{"name":"sinus venosus ASD","type":"related"},{"name":"sinus venosus atrial septal defects","type":"related"}],"termid":"MONDO:0020436","xrefs":{"Monarch":{"xref_id":"0020436"}}}


id: SO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the resulting polypeptide structure.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3D_polypeptide_structure_variant","synonyms":[{"name":"3D polypeptide structure variant","type":"exact"}],"termid":"SO:0001599"}


id: GO:0102911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (-)-secoisolariciresinol + NAD = H+ + (-)-lactol + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secoisolariciresinol dehydrogenase activity (obsolete GO:0102911)","termid":"GO:0102911"}


id: MONDO:0012761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3q29 microduplication is a chromosomal abnormality associated with variable clinical findings including mild or moderate intellectual deficit and microcephaly.","definition_xrefs":["PMID:18241066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 3","termid":"MONDO:0016954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3q29 microduplication syndrome","secondary_identifiers":["DECIPHER:77","MESH:C567626","GARD:10360","DOID:0060459","MEDGEN:440897","OMIM:611936","Orphanet:251038","SCTID:717973004","UMLS:C2749873"],"synonyms":[{"name":"3q29 microduplication","type":"exact"},{"name":"3q29 microduplication syndrome","type":"exact"},{"name":"chromosome 3q29 DUPLICATION syndrome","type":"related"},{"name":"microduplication 3Q29 syndrome","type":"related"},{"name":"trisomy 3q29","type":"exact"}],"termid":"MONDO:0012761","xrefs":{"Monarch":{"xref_id":"0012761"}}}


id: PBO:0027013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_molecular_function","termid":"PBO:0027013"}


id: GO:0035329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cascade that starts with the activation of hippo (STK4/MST1 and STK3/MST2 in mammals and hpo kinase in Drosophila). Hippo then phosphorylates LATS1/2, which in turn phosphoylates the transcriptional co-activator YAP1 (yki in Drosophila), leading to its cytosolic retention and/or degradation.","definition_xrefs":["PMID:18328423","PMID:36347846","PMID:17318211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"hippo signaling","secondary_identifiers":["Reactome:R-HSA-2028269"],"synonyms":[{"name":"SWH pathway","type":"narrow"},{"name":"Salvador-Warts-Hippo signaling pathway","type":"narrow"},{"name":"hippo signal transduction","type":"exact"},{"name":"hippo signaling cascade","type":"related"},{"name":"hippo signaling pathway","type":"exact"},{"name":"hippo signalling cascade","type":"related"}],"termid":"GO:0035329"}


id: MONDO:0004708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stage 0 includes: For squamous cell carcinoma: Tis (HGD), N0, M0, G1, GX, Tumor location: Any. For adenocarcinoma: Tis (HGD), N0, M0, G1, GX. Tis: High-grade dysplasia. N0: No regional lymph node metastasis. M0: No distant metastasis. G1: Well differentiated. GX: Grade cannot be assessed-stage grouping as G1. Tumor location: Location of the primary cancer site is defined by the position of the upper (proximal) edge of the tumor in the esophagus. (AJCC 7th ed.)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"carcinoma of esophagus","termid":"MONDO:0019086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophagus carcinoma in situ","secondary_identifiers":["DOID:9095","MEDGEN:56332","SCTID:92585006","UMLS:C0154059","ICD9:230.1","ICD10CM:D00.1","NCIT:C89771"],"synonyms":[{"name":"carcinoma in situ of esophagus","type":"exact"},{"name":"carcinoma in situ of oesophagus","type":"exact"},{"name":"esophageal carcinoma in situ","type":"exact"},{"name":"esophageal carcinoma in situ aJCC v7","type":"exact"},{"name":"esophagus in situ carcinoma","type":"exact"},{"name":"oesophagus in situ carcinoma","type":"exact"},{"name":"severe esophageal dysplasia","type":"exact"},{"name":"severe esophageal dysplasia aJCC v7","type":"exact"},{"name":"stage 0 carcinoma of the esophagus","type":"exact"},{"name":"stage 0 carcinoma of the oesophagus","type":"exact"},{"name":"stage 0 esophageal cancer","type":"exact"},{"name":"stage 0 esophageal cancer aJCC v7","type":"exact"},{"name":"stage 0 esophageal carcinoma in situ","type":"exact"},{"name":"stage 0 esophagus carcinoma","type":"exact"},{"name":"stage 0 oesophagus carcinoma","type":"exact"}],"termid":"MONDO:0004708","xrefs":{"Monarch":{"xref_id":"0004708"}}}


id: GO:0047862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diisopropyl fluorophosphate + H2O = diisopropyl phosphate + fluoride + 2 H+.","definition_xrefs":["RHEA:24100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds","termid":"GO:0016824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diisopropyl-fluorophosphatase activity","secondary_identifiers":["EC:3.8.2.2","KEGG_REACTION:R01533","MetaCyc:DIISOPROPYL-FLUOROPHOSPHATASE-RXN"],"synonyms":[{"name":"DFPase activity","type":"related"},{"name":"OPA anhydrase activity","type":"related"},{"name":"OPAA activity","type":"related"},{"name":"dialkylfluorophosphatase activity","type":"related"},{"name":"diisopropyl phosphorofluoridate hydrolase activity","type":"related"},{"name":"diisopropyl-fluorophosphate fluorohydrolase activity","type":"related"},{"name":"diisopropylfluorophosphonate dehalogenase activity","type":"related"},{"name":"diisopropylphosphofluoridase activity","type":"related"},{"name":"isopropylphosphorofluoridase activity","type":"related"},{"name":"organophosphate acid anhydrase activity","type":"related"},{"name":"organophosphorus acid anhydrolase activity","type":"related"},{"name":"somanase activity","type":"related"},{"name":"tabunase activity","type":"related"}],"termid":"GO:0047862"}


id: PBO:0001888
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"identical paralog","termid":"PBO:0001888"}


id: FYPO:0003707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing valinomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on valinomycin","synonyms":[{"name":"normal cell population growth in presence of valinomycin","type":"exact"},{"name":"normal cell population growth on valinomycin","type":"exact"},{"name":"normal cellular response to valinomycin","type":"related"},{"name":"normal vegetative cell population growth on valinomycin","type":"exact"}],"termid":"FYPO:0003707"}


id: PBO:0053779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1029","termid":"PBO:0053779"}


id: MONDO:0025294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bacterial, viral, or parasitic diseases transmitted to humans and animals by the bite of infected ticks. The families Ixodidae and Argasidae contain many bloodsucking species that are important pests of man and domestic birds and mammals and probably exceed all other arthropods in the number and variety of disease agents they transmit. Many of the tick-borne diseases are zoonotic.","definition_xrefs":["MESH:D017282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tick-borne infectious disease","secondary_identifiers":["MEDGEN:56488","UMLS:C0162700"],"synonyms":[{"name":"Tick borne diseases","type":"related"},{"name":"Tick borne infections","type":"related"},{"name":"Tick-borne disease","type":"related"},{"name":"Tick-borne infection","type":"related"},{"name":"Tick-borne infections","type":"related"},{"name":"disease, Tick-borne","type":"related"},{"name":"diseases, Tick-borne","type":"related"},{"name":"infection, Tick-borne","type":"related"},{"name":"infections, Tick borne","type":"related"},{"name":"infections, Tick-borne","type":"related"}],"termid":"MONDO:0025294","xrefs":{"Monarch":{"xref_id":"0025294"}}}


id: GO:0070027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of carbon monoxide (CO).","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140299"],"is_obsolete":false,"name":"carbon monoxide sensor activity","synonyms":[{"name":"carbon monoxide sensing activity","type":"exact"}],"termid":"GO:0070027"}


id: GO:1900264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"activation of DNA duplicase activity","type":"exact"},{"name":"activation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"activation of DNA polymerase I","type":"narrow"},{"name":"activation of DNA polymerase II","type":"narrow"},{"name":"activation of DNA polymerase III","type":"narrow"},{"name":"activation of DNA polymerase V activity","type":"narrow"},{"name":"activation of DNA polymerase alpha","type":"narrow"},{"name":"activation of DNA polymerase beta","type":"narrow"},{"name":"activation of DNA polymerase gamma","type":"narrow"},{"name":"activation of DNA replicase activity","type":"exact"},{"name":"activation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"activation of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"activation of Klenow fragment","type":"narrow"},{"name":"activation of Taq DNA polymerase","type":"narrow"},{"name":"activation of Taq Pol I","type":"narrow"},{"name":"activation of Tca DNA polymerase","type":"narrow"},{"name":"activation of alpha DNA polymerase activity","type":"narrow"},{"name":"activation of beta DNA polymerase activity","type":"narrow"},{"name":"activation of delta DNA polymerase activity","type":"narrow"},{"name":"activation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"activation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"activation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"activation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"activation of duplicase","type":"broad"},{"name":"activation of epsilon DNA polymerase activity","type":"narrow"},{"name":"activation of eta DNA polymerase activity","type":"narrow"},{"name":"activation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"activation of iota DNA polymerase activity","type":"narrow"},{"name":"activation of kappa DNA polymerase activity","type":"narrow"},{"name":"activation of lambda DNA polymerase activity","type":"narrow"},{"name":"activation of mu DNA polymerase activity","type":"narrow"},{"name":"activation of nu DNA polymerase activity","type":"narrow"},{"name":"activation of sequenase","type":"related"},{"name":"activation of sigma DNA polymerase activity","type":"narrow"},{"name":"activation of theta DNA polymerase activity","type":"narrow"},{"name":"activation of zeta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of DNA duplicase activity","type":"exact"},{"name":"positive regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"positive regulation of DNA polymerase I","type":"narrow"},{"name":"positive regulation of DNA polymerase II","type":"narrow"},{"name":"positive regulation of DNA polymerase III","type":"narrow"},{"name":"positive regulation of DNA polymerase V activity","type":"narrow"},{"name":"positive regulation of DNA polymerase alpha","type":"narrow"},{"name":"positive regulation of DNA polymerase beta","type":"narrow"},{"name":"positive regulation of DNA polymerase gamma","type":"narrow"},{"name":"positive regulation of DNA replicase activity","type":"exact"},{"name":"positive regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"positive regulation of Klenow fragment","type":"narrow"},{"name":"positive regulation of Taq DNA polymerase","type":"narrow"},{"name":"positive regulation of Taq Pol I","type":"narrow"},{"name":"positive regulation of Tca DNA polymerase","type":"narrow"},{"name":"positive regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"positive regulation of beta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of delta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"positive regulation of duplicase","type":"broad"},{"name":"positive regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"positive regulation of eta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"positive regulation of iota DNA polymerase activity","type":"narrow"},{"name":"positive regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"positive regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"positive regulation of mu DNA polymerase activity","type":"narrow"},{"name":"positive regulation of nu DNA polymerase activity","type":"narrow"},{"name":"positive regulation of sequenase","type":"related"},{"name":"positive regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"positive regulation of theta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"up regulation of DNA duplicase activity","type":"exact"},{"name":"up regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up regulation of DNA polymerase I","type":"narrow"},{"name":"up regulation of DNA polymerase II","type":"narrow"},{"name":"up regulation of DNA polymerase III","type":"narrow"},{"name":"up regulation of DNA polymerase V activity","type":"narrow"},{"name":"up regulation of DNA polymerase alpha","type":"narrow"},{"name":"up regulation of DNA polymerase beta","type":"narrow"},{"name":"up regulation of DNA polymerase gamma","type":"narrow"},{"name":"up regulation of DNA replicase activity","type":"exact"},{"name":"up regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"up regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"up regulation of Klenow fragment","type":"narrow"},{"name":"up regulation of Taq DNA polymerase","type":"narrow"},{"name":"up regulation of Taq Pol I","type":"narrow"},{"name":"up regulation of Tca DNA polymerase","type":"narrow"},{"name":"up regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"up regulation of beta DNA polymerase activity","type":"narrow"},{"name":"up regulation of delta DNA polymerase activity","type":"narrow"},{"name":"up regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"up regulation of duplicase","type":"broad"},{"name":"up regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"up regulation of eta DNA polymerase activity","type":"narrow"},{"name":"up regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"up regulation of iota DNA polymerase activity","type":"narrow"},{"name":"up regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"up regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"up regulation of mu DNA polymerase activity","type":"narrow"},{"name":"up regulation of nu DNA polymerase activity","type":"narrow"},{"name":"up regulation of sequenase","type":"related"},{"name":"up regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"up regulation of theta DNA polymerase activity","type":"narrow"},{"name":"up regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of DNA duplicase activity","type":"exact"},{"name":"up-regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up-regulation of DNA polymerase I","type":"narrow"},{"name":"up-regulation of DNA polymerase II","type":"narrow"},{"name":"up-regulation of DNA polymerase III","type":"narrow"},{"name":"up-regulation of DNA polymerase V activity","type":"narrow"},{"name":"up-regulation of DNA polymerase alpha","type":"narrow"},{"name":"up-regulation of DNA polymerase beta","type":"narrow"},{"name":"up-regulation of DNA polymerase gamma","type":"narrow"},{"name":"up-regulation of DNA replicase activity","type":"exact"},{"name":"up-regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"up-regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"up-regulation of Klenow fragment","type":"narrow"},{"name":"up-regulation of Taq DNA polymerase","type":"narrow"},{"name":"up-regulation of Taq Pol I","type":"narrow"},{"name":"up-regulation of Tca DNA polymerase","type":"narrow"},{"name":"up-regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"up-regulation of beta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of delta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"up-regulation of duplicase","type":"broad"},{"name":"up-regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"up-regulation of eta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"up-regulation of iota DNA polymerase activity","type":"narrow"},{"name":"up-regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"up-regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"up-regulation of mu DNA polymerase activity","type":"narrow"},{"name":"up-regulation of nu DNA polymerase activity","type":"narrow"},{"name":"up-regulation of sequenase","type":"related"},{"name":"up-regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"up-regulation of theta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"upregulation of DNA duplicase activity","type":"exact"},{"name":"upregulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"upregulation of DNA polymerase I","type":"narrow"},{"name":"upregulation of DNA polymerase II","type":"narrow"},{"name":"upregulation of DNA polymerase III","type":"narrow"},{"name":"upregulation of DNA polymerase V activity","type":"narrow"},{"name":"upregulation of DNA polymerase alpha","type":"narrow"},{"name":"upregulation of DNA polymerase beta","type":"narrow"},{"name":"upregulation of DNA polymerase gamma","type":"narrow"},{"name":"upregulation of DNA replicase activity","type":"exact"},{"name":"upregulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"upregulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"upregulation of Klenow fragment","type":"narrow"},{"name":"upregulation of Taq DNA polymerase","type":"narrow"},{"name":"upregulation of Taq Pol I","type":"narrow"},{"name":"upregulation of Tca DNA polymerase","type":"narrow"},{"name":"upregulation of alpha DNA polymerase activity","type":"narrow"},{"name":"upregulation of beta DNA polymerase activity","type":"narrow"},{"name":"upregulation of delta DNA polymerase activity","type":"narrow"},{"name":"upregulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"upregulation of duplicase","type":"broad"},{"name":"upregulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"upregulation of eta DNA polymerase activity","type":"narrow"},{"name":"upregulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"upregulation of iota DNA polymerase activity","type":"narrow"},{"name":"upregulation of kappa DNA polymerase activity","type":"narrow"},{"name":"upregulation of lambda DNA polymerase activity","type":"narrow"},{"name":"upregulation of mu DNA polymerase activity","type":"narrow"},{"name":"upregulation of nu DNA polymerase activity","type":"narrow"},{"name":"upregulation of sequenase","type":"related"},{"name":"upregulation of sigma DNA polymerase activity","type":"narrow"},{"name":"upregulation of theta DNA polymerase activity","type":"narrow"},{"name":"upregulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900264"}


id: GO:0014811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014809"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014811"}


id: GO:0010149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A preprogrammed process associated with the dismantling of an anatomical structure and an overall decline in metabolism. This may include the breakdown of organelles, membranes and other cellular components. An example of this process is found in Arabidopsis thaliana, when older leaves or floral organs are shed.","definition_xrefs":["GOC:mtg_sensu","ISBN:0387987819"],"gene_count":0,"genotype_count":0,"name":"obsolete senescence (obsolete GO:0010149)","secondary_identifiers":["Wikipedia:Senescence"],"synonyms":[{"name":"senescence","type":"exact"}],"termid":"GO:0010149"}


id: PBO:0041621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CABP7 divergent transcript","termid":"PBO:0041621"}


id: GO:1902564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil activation.","definition_xrefs":["GOC:TermGenie","PMID:17588661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of neutrophil activation","termid":"GO:1902563"},{"relation_name":"negatively_regulates","term_name":"neutrophil activation","termid":"GO:0042119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil activation","synonyms":[{"name":"down regulation of neutrophil activation","type":"exact"},{"name":"down-regulation of neutrophil activation","type":"exact"},{"name":"downregulation of neutrophil activation","type":"exact"},{"name":"inhibition of neutrophil activation","type":"narrow"}],"termid":"GO:1902564"}


id: PBO:0016046
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu3 and snu32 RNAs present at similar levels","termid":"PBO:0016046"}


id: MONDO:0018155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary lateral sclerosis (PLS) is an idiopathic non-familial motor neuron disease characterized by slowly progressive upper motor neuron dysfunction leading to spasticity, mild weakness in voluntary muscle movement, hyperreflexia, and loss of motor speech production.","definition_xrefs":["Orphanet:35689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"lateral sclerosis","secondary_identifiers":["icd11.foundation:1686688462","ICD9:335.24","NANDO:1200008","UMLS:C0154682","NCIT:C129933","SCTID:81211007","GARD:10684","MEDGEN:57591","MedDRA:10036704","DOID:230"],"synonyms":[{"name":"PLS","type":"exact"},{"name":"adult-onset PLS","type":"exact"},{"name":"adult-onset primary lateral sclerosis","type":"exact"},{"name":"primary lateral sclerosis","type":"exact"}],"termid":"MONDO:0018155","xrefs":{"Monarch":{"xref_id":"0018155"}}}


id: GO:0106259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of a symbiont from one host cell to another.","definition_xrefs":["PMID:18456802","PMID:19816653","PMID:19262673","PMID:29567712","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migration in host","termid":"GO:0044001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated cell-to-cell migration in host","synonyms":[{"name":"cell-to-cell migration in host","type":"exact"},{"name":"symbiont-mediated dissemination across host cells","type":"exact"}],"termid":"GO:0106259"}


id: MONDO:0000294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Mesocestoides.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cestode infectious disease","termid":"MONDO:0042488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesocestoidiasis","secondary_identifiers":["UMLS:C0277108","SCTID:85750001","DOID:0050253","MEDGEN:547845"],"synonyms":[{"name":"Mesocestoides caused disease or disorder","type":"exact"},{"name":"Mesocestoides disease or disorder","type":"exact"},{"name":"Mesocestoides infectious disease","type":"exact"},{"name":"infection by Mesocestoides","type":"exact"},{"name":"infection caused by Mesocestoides","type":"related"}],"termid":"MONDO:0000294","xrefs":{"Monarch":{"xref_id":"0000294"}}}


id: PBO:0030377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_diamide","termid":"PBO:0030377"}


id: PBO:0048143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD6 antisense RNA 1","termid":"PBO:0048143"}


id: GO:0035945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading defective or aberrant non-coding RNA transcripts (ncRNAs) within the mitochondrion.","definition_xrefs":["PMID:19864255","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA surveillance","termid":"GO:2000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial ncRNA surveillance","synonyms":[{"name":"mitochondrial aberrant ncRNA catabolic process","type":"exact"},{"name":"mitochondrial ncRNA quality control","type":"exact"},{"name":"mitochondrial non-coding RNA surveillance","type":"exact"}],"termid":"GO:0035945"}


id: PR:O13911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional polynucleotide phosphatase/kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12083:SF5","OMA:SCHPO00882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional polynucleotide phosphatase/kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.04c","secondary_identifiers":["UniProtKB:O13911"],"synonyms":[{"name":"DNA 5'-kinase/3'-phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PNKP","type":"exact"},{"name":"polynucleotide kinase-3'-phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13911"}


id: PBO:0074218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC44A3 antisense RNA 1","termid":"PBO:0074218"}


id: GO:0006920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete commitment to apoptosis (obsolete GO:0006920)","synonyms":[{"name":"commitment to apoptosis","type":"exact"}],"termid":"GO:0006920"}


id: PR:Q9UT68
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4F11.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.03c","synonyms":[{"name":"Spom972h-SPCC4F11.03c","type":"exact"}],"termid":"PR:Q9UT68"}


id: MONDO:0018769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intestinal infection with Isospora belli.","definition_xrefs":["NCIT:C4076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coccidiosis","termid":"MONDO:0005707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isosporiasis","secondary_identifiers":["GARD:3033","SCTID:371423007","MEDGEN:90233","MedDRA:10023076","UMLS:C0311386","ICD10CM:A07.3","MESH:D021865","DOID:2112","Orphanet:472","icd11.foundation:137713224","EFO:0007232"],"synonyms":[{"name":"Cystoisospora belli caused disease or disorder","type":"exact"},{"name":"Cystoisospora belli disease or disorder","type":"exact"},{"name":"Cystoisospora belli infectious disease","type":"exact"},{"name":"Isosporosis","type":"exact"},{"name":"cystoisosporiasis","type":"exact"},{"name":"infection by Isospora belli and Isospora hominis","type":"related"}],"termid":"MONDO:0018769","xrefs":{"Monarch":{"xref_id":"0018769"}}}


id: MOD:02025
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts the alpha amino group of a glutamine residue to glutaminyl glutamic acid by forming an isopeptide bond with the side chain carboxyl group of a free glutamic acid.","definition_xrefs":["PubMed:28801462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutaminyl glutamic acid","termid":"MOD:02025"}


id: PBO:0089289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine synthetase family","termid":"PBO:0089289"}


id: GO:0043703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a photoreceptor cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate determination","termid":"GO:0048664"},{"relation_name":"part_of","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell fate determination","termid":"GO:0043703"}


id: PBO:0055209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2634","termid":"PBO:0055209"}


id: PBO:0026930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_composition","termid":"PBO:0026930"}


id: MONDO:0013834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any UV-sensitive syndrome in which the cause of the disease is a mutation in the UVSSA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UV-sensitive syndrome","termid":"MONDO:0015797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190","MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"UV-sensitive syndrome 3","secondary_identifiers":["UMLS:C3553328","OMIM:614640","GARD:15828","MEDGEN:766242","NCIT:C173107"],"synonyms":[{"name":"UV-sensitive syndrome 3","type":"exact"},{"name":"UV-sensitive syndrome caused by mutation in UVSSA","type":"exact"},{"name":"UV-sensitive syndrome type 3","type":"exact"},{"name":"UVSS3","type":"related"},{"name":"UVSSA UV-sensitive syndrome","type":"exact"}],"termid":"MONDO:0013834","xrefs":{"Monarch":{"xref_id":"0013834"}}}


id: PBO:0005119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX/PXA domain protein","termid":"PBO:0005119"}


id: PBO:0046999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A2, pseudogene","termid":"PBO:0046999"}


id: PBO:0079890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPP2 intronic transcript 1","termid":"PBO:0079890"}


id: GO:0050952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory electrical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of electrical stimulus","termid":"GO:0050952"}


id: MONDO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatophytosis involving the stratum corneum of the skin of the groin and perianal area.","definition_xrefs":["NCIT:C34535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatophytosis of groin and perianal area","secondary_identifiers":["MEDGEN:3769","SCTID:399029005","UMLS:C0011638","DOID:11917","ICD9:110.3"],"synonyms":[{"name":"Dhobie itch","type":"exact"},{"name":"dermatophytosis of groin & perianal area","type":"exact"},{"name":"dermatophytosis of groin and perianal area","type":"exact"},{"name":"tinea cruris","type":"related"}],"termid":"MONDO:0001405","xrefs":{"Monarch":{"xref_id":"0001405"}}}


id: MONDO:0012907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome associates progressive visual loss with scoliosis or kyphoscoliosis and arachnodactyly of the fingers and toes.","definition_xrefs":["Orphanet:171844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blindness - scoliosis - arachnodactyly syndrome","secondary_identifiers":["SCTID:717920004","MEDGEN:436640","OMIM:612445","GARD:17070","UMLS:C2676234","MESH:C567309"],"synonyms":[{"name":"scoliosis, arachnodactyly, and blindness","type":"related"}],"termid":"MONDO:0012907","xrefs":{"Monarch":{"xref_id":"0012907"}}}


id: GO:0033941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2)-alpha-D- and (1->6)-alpha-D- linkages in mannan, releasing D-mannose.","definition_xrefs":["EC:3.2.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"mannan exo-1,2-1,6-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.137-RXN"],"synonyms":[{"name":"1,2-1,6-alpha-D-mannan D-mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,6-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033941"}


id: PBO:0070404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP9 pseudogene","termid":"PBO:0070404"}


id: PBO:0055701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLPH divergent transcript","termid":"PBO:0055701"}


id: GO:0099071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule bundle that undergoes changes in length, and in which microtubule sliding takes place.","definition_xrefs":["GOC:vw","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dynamic microtubule bundle","termid":"GO:0099071"}


id: PBO:0073982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 24 member 3","termid":"PBO:0073982"}


id: MONDO:0011487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease-like 3 is a rare Huntington disease-like syndrome characterized by childhood-onset progressive neurologic deterioration with pyramidal and extrapyramidal abnormalities, chorea, dystonia, ataxia, gait instability, spasticity, seizures, mutism, and (on brain MRI) progressive frontal cortical atrophy and bilateral caudate atrophy.","definition_xrefs":["Orphanet:157946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"Huntington disease-like 3","secondary_identifiers":["MEDGEN:347622","GARD:16986","MESH:C565747","OMIM:604802","UMLS:C1858114"],"synonyms":[{"name":"HDL3","type":"exact"},{"name":"Huntington disease-like 3","type":"exact"},{"name":"Huntington disease-like neurodegenerative disorder, autosomal recessive","type":"related"},{"name":"Huntington disease-like type 3","type":"exact"}],"termid":"MONDO:0011487","xrefs":{"Monarch":{"xref_id":"0011487"}}}


id: PBO:0074562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 16","termid":"PBO:0074562"}


id: PBO:0001161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA lariat debranching enzyme Dbr1","termid":"PBO:0001161"}


id: GO:1901709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-larreatricin.","definition_xrefs":["PMID:12960376","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-larreatricin metabolic process","synonyms":[{"name":"(+)-larreatricin metabolism","type":"exact"}],"termid":"GO:1901709"}


id: MONDO:0859139
data:
  {"annotated_genes":["SJAG_05313","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86352,86353],"is_not":false,"summary":null,"term":"MONDO:0859139"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"blepharophimosis-impaired intellectual development syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081442","OMIM:619293","MEDGEN:1779966","Orphanet:637013","UMLS:C5443984"],"synonyms":[{"name":"SMARCA2-related blepharophimosis-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0859139","terms_by_termid":{"MONDO:0859139":null},"xrefs":{"Monarch":{"xref_id":"0859139"}}}


id: PBO:0087623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CSN and 26S proteasome lid complexes; similar to mammalian p55 subunit and to another S. cerevisiae regulatory subunit, Rpn7p; Rpn5p is an essential protein; the COP9 signalosome is also known as the CSN","termid":"PBO:0087623"}


id: GO:0033113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a cyanelle and form the cyanelle envelope.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"cyanelle envelope","termid":"GO:0033112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle membrane","termid":"GO:0033113"}


id: PBO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dam1","termid":"PBO:0001886"}


id: MONDO:0005608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly contagious viral infection caused by the varicella zoster virus. Clinically, it may be manifested as shingles or chicken pox.","definition_xrefs":["NCIT:C96407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"varicella zoster infection","secondary_identifiers":["ICD9:052.7","UMLS:C0586989","EFO:0006509","MEDGEN:668886","SCTID:309465005"],"synonyms":[{"name":"Varicella-zoster Virus infection","type":"exact"},{"name":"varicella zoster infection","type":"exact"}],"termid":"MONDO:0005608","xrefs":{"Monarch":{"xref_id":"0005608"}}}


id: PBO:0064276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H2","termid":"PBO:0064276"}


id: PBO:0030290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_heat_shock","termid":"PBO:0030290"}


id: PBO:0050193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 10","termid":"PBO:0050193"}


id: GO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a misfolded protein stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:add","PMID:15226511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to misfolded protein","termid":"GO:0051788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of misfolded protein","termid":"GO:0002236"}


id: GO:1905023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of threonine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:8049265"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of threonine-tRNA ligase activity (obsolete GO:1905023)","synonyms":[{"name":"activation of L-threonine:tRNAThr ligase (AMP-forming)","type":"narrow"},{"name":"activation of TRS","type":"related"},{"name":"activation of threonine translase activity","type":"narrow"},{"name":"activation of threonine-tRNA ligase activity","type":"narrow"},{"name":"activation of threonine-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of threonyl ribonucleic synthetase activity","type":"narrow"},{"name":"activation of threonyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of threonyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of threonyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of threonyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"positive regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of TRS","type":"related"},{"name":"positive regulation of threonine translase activity","type":"exact"},{"name":"positive regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"up regulation of TRS","type":"related"},{"name":"up regulation of threonine translase activity","type":"exact"},{"name":"up regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"up regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"up regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up-regulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of TRS","type":"related"},{"name":"up-regulation of threonine translase activity","type":"exact"},{"name":"up-regulation of threonine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"upregulation of L-threonine:tRNAThr ligase (AMP-forming)","type":"exact"},{"name":"upregulation of TRS","type":"related"},{"name":"upregulation of threonine translase activity","type":"exact"},{"name":"upregulation of threonine-tRNA ligase activity","type":"exact"},{"name":"upregulation of threonine-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of threonyl ribonucleic synthetase activity","type":"exact"},{"name":"upregulation of threonyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of threonyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of threonyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of threonyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905023"}


id: MOD:01745
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["Unimod:737#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated N-terminal","termid":"MOD:01718"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01745"}


id: GO:1905294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neural crest cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:15073157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of neural crest cell differentiation","termid":"GO:1905292"},{"relation_name":"is_a","term_name":"positive regulation of stem cell differentiation","termid":"GO:2000738"},{"relation_name":"positively_regulates","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neural crest cell differentiation","synonyms":[{"name":"activation of neural crest cell differentiation","type":"narrow"},{"name":"up regulation of neural crest cell differentiation","type":"exact"},{"name":"up-regulation of neural crest cell differentiation","type":"exact"},{"name":"upregulation of neural crest cell differentiation","type":"exact"}],"termid":"GO:1905294"}


id: PBO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_zinc_level","termid":"PBO:0030116"}


id: PBO:0070954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 9","termid":"PBO:0070954"}


id: PBO:0071033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 35","termid":"PBO:0071033"}


id: MONDO:0023193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Friedman Goodman syndrome","termid":"MONDO:0023193","xrefs":{"Monarch":{"xref_id":"0023193"}}}


id: PATO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound frequency in the range of 20 to 20.000 Hz.","direct_ancestors":[{"relation_name":"is_a","term_name":"sound frequency","termid":"PATO:0001520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sonic","termid":"PATO:0001525"}


id: GO:0030354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of melanin-concentrating hormone, a cyclic peptide hormone that, upon receptor binding, induces melanin aggregation in melanocytes, and is also involved in regulating food intake and energy balance in mammals.","definition_xrefs":["GOC:mah","PMID:11416225","PMID:9792536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0005515","GO:0005488","GO:0140677"],"is_obsolete":false,"name":"melanin-concentrating hormone activity","termid":"GO:0030354"}


id: PBO:0065127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, DNA-activated, catalytic subunit","termid":"PBO:0065127"}


id: MONDO:0012106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the ASPM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 5, primary, autosomal recessive","secondary_identifiers":["GARD:15441","OMIM:608716","UMLS:C1837501","DOID:0070280","MESH:C563871","MEDGEN:373344"],"synonyms":[{"name":"ASPM autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH5","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in ASPM","type":"exact"},{"name":"microcephaly 5, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0012106","xrefs":{"Monarch":{"xref_id":"0012106"}}}


id: MONDO:0015849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare vaginal malformation characterized by the presence of a complete or incomplete septum dividing the vagina into two parallel cavities, resulting from failure of reabsorption of the midline uterine septum between the two fused Müllerian ducts during embryogenesis. Patients are often asymptomatic, but may present with menorrhagia, dysmenorrhea, dyspareunia, infertility, or spontaneous abortion. The condition may occur as an isolated malformation or in association with other Müllerian duct anomalies (such as septate uterus or uterus didelphys) or renal abnormalities.","definition_xrefs":["Orphanet:180157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longitudinal vaginal septum","secondary_identifiers":["icd11.foundation:1594393492","GARD:20190","HP:0008740","MEDGEN:331104","UMLS:C1841680"],"termid":"MONDO:0015849","xrefs":{"Monarch":{"xref_id":"0015849"}}}


id: MONDO:0100554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of narcolepsy that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy","termid":"MONDO:0021107"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary narcolepsy","secondary_identifiers":["OMIMPS:161400"],"termid":"MONDO:0100554","xrefs":{"Monarch":{"xref_id":"0100554"}}}


id: MOD:01159
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively attaches a residue to murein peptidoglycan by either a pentaglycine linker peptide or a peptide-like L-alanyl-D-glutamyl-2,6-diaminopimelic acid linkage.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"peptidoglycanated residue","termid":"MOD:01159"}


id: PBO:0068031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 336","termid":"PBO:0068031"}


id: PBO:0057915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3618","termid":"PBO:0057915"}


id: GO:0101030
data:
  {"annotated_genes":["SJAG_01781","SJAG_06284","SJAG_00683","SJAG_02179"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61546,66141,72448,73745],"is_not":false,"summary":null,"term":"GO:0101030"}]},"cv_name":"biological_process","definition":"The modification of a tRNA anticodon loop by replacing guanine with queuonine. Reaction is tRNA guanine + queuine = tRNA queuine + guanine.","definition_xrefs":["PMID:24911101","GOC:vw","GOC:PomBase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00683":null,"SJAG_01781":null,"SJAG_02179":null,"SJAG_06284":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA-guanine transglycosylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000117":null},"termid":"GO:0101030","terms_by_termid":{"GO:0101030":null}}


id: GO:0043364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the activation of an enzyme by generating an organic free radical on a glycine residue via a homolytic cleavage of S-adenosyl-L-methionine (SAM).","definition_xrefs":["GOC:jl","PMID:24486374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glycyl-radical enzyme activating activity","secondary_identifiers":["EC:1.97.1.-"],"synonyms":[{"name":"catalysis of free radical formation","type":"broad"}],"termid":"GO:0043364"}


id: MONDO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemangioma (obsolete MONDO:0002339)","termid":"MONDO:0002339","xrefs":{"Monarch":{"xref_id":"0002339"}}}


id: PBO:0059559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1C, pseudogene","termid":"PBO:0059559"}


id: PBO:0071509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 12","termid":"PBO:0071509"}


id: PBO:0056766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 17","termid":"PBO:0056766"}


id: GO:0047126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(5)-[1(S)-1-carboxyethyl]-L-ornithine + H2O + NADP+ = L-ornithine + H+ + NADPH + pyruvate.","definition_xrefs":["RHEA:18661","EC:1.5.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"N5-(carboxyethyl)ornithine synthase activity","secondary_identifiers":["KEGG_REACTION:R00666","MetaCyc:1.5.1.24-RXN"],"synonyms":[{"name":"5-N-(L-1-carboxyethyl)-L-ornithine:NADP+ oxidoreductase (L-ornithine-forming)","type":"related"},{"name":"N5-(L-1-carboxyethyl)-L-ornithine:NADP+ oxidoreductase (L-ornithine-forming)","type":"related"}],"termid":"GO:0047126"}


id: PBO:0080925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 3","termid":"PBO:0080925"}


id: FYECO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethyl methanesulfonate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ethyl methanesulfonate","synonyms":[{"name":"+ ethyl methanesulfonate","type":"exact"}],"termid":"FYECO:0000419"}


id: GO:0009361
data:
  {"annotated_genes":["SJAG_03813","SJAG_01524"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75145,114714],"is_not":false,"summary":null,"term":"GO:0009361"}]},"cv_name":"cellular_component","definition":"A heterodimeric enzyme complex, composed of an alpha and beta chain, most usually found in (but not limited to) bacteria. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming ATP.","definition_xrefs":["PMID:9874242","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-CoA ligase complex","termid":"GO:0042709"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"succinate-CoA ligase complex (ADP-forming)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"succinyl-CoA synthetase, ADP-forming","type":"exact"}],"termid":"GO:0009361","terms_by_termid":{"GO:0009361":null}}


id: PBO:0051760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 5 pseudogene 1","termid":"PBO:0051760"}


id: PBO:0067081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 116, pseudogene","termid":"PBO:0067081"}


id: GO:0035377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of water (H2O) from one side of an epithelium to the other.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water transport","termid":"GO:0006833"},{"relation_name":"is_a","term_name":"epithelial fluid transport","termid":"GO:0042045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"transepithelial water transport","termid":"GO:0035377"}


id: PBO:0003672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc5 (predicted)","termid":"PBO:0003672"}


id: GO:0008582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic assembly at neuromuscular junctions.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"regulation of neuromuscular junction development","termid":"GO:1904396"},{"relation_name":"regulates","term_name":"synaptic assembly at neuromuscular junction","termid":"GO:0051124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic assembly at neuromuscular junction","synonyms":[{"name":"regulation of synaptic growth at neuromuscular junction","type":"related"}],"termid":"GO:0008582"}


id: GO:0110147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that contributes to the delivery of nickel ions to a target protein to facilitate its maturation.","definition_xrefs":["GOC:al","PMID:24115911"],"gene_count":0,"genotype_count":0,"name":"obsolete protein maturation by nickel ion transfer (obsolete GO:0110147)","termid":"GO:0110147"}


id: PBO:0016883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Isp3","termid":"PBO:0016883"}


id: MONDO:0007208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Boomerang dysplasia (BD) is a rare lethal skeletal dysplasia characterized by severe short-limbed dwarfism, dislocated joints, club feet, distinctive facies and diagnostic x-ray findings of underossified and dysplastic long tubular bones, with a boomerang-like bowing.","definition_xrefs":["Orphanet:1263"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Boomerang dysplasia","secondary_identifiers":["MESH:C536573","OMIM:112310","UMLS:C0432201","ICD9:756.9","GARD:933","MEDGEN:96579","SCTID:254054000","DOID:0050680","icd11.foundation:423736259"],"synonyms":[{"name":"Boomerang dysplasia","type":"exact"},{"name":"Boomerang-like skeletal dysplasia","type":"related"},{"name":"dwarfism with short, bowed, rigid limbs and characteristic facies","type":"related"}],"termid":"MONDO:0007208","xrefs":{"Monarch":{"xref_id":"0007208"}}}


id: PBO:0064661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4D","termid":"PBO:0064661"}


id: PBO:0055087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2505","termid":"PBO:0055087"}


id: GO:2000461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of eukaryotic cell surface binding (obsolete GO:2000461)","synonyms":[{"name":"negative regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000461"}


id: PBO:0059455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 5","termid":"PBO:0059455"}


id: PBO:0088867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc3","termid":"PBO:0088867"}


id: GO:0045896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription during mitotic cell cycle (obsolete GO:0045896)","synonyms":[{"name":"mitotic regulation of transcription","type":"exact"},{"name":"regulation of transcription, mitotic","type":"exact"}],"termid":"GO:0045896"}


id: PBO:0087607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cohesin complex; which is required for sister chromatid cohesion during mitosis and meiosis and interacts with centromeres and chromosome arms; relocalizes to the cytosol in response to hypoxia; essential for viability","termid":"PBO:0087607"}


id: PBO:0068894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 136, pseudogene","termid":"PBO:0068894"}


id: MONDO:0004711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyloidosis (obsolete MONDO:0004711)","synonyms":[{"name":"obsolete amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0004711","xrefs":{"Monarch":{"xref_id":"0004711"}}}


id: GO:0046775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that results in the inhibition of host cell cytokine production.","definition_xrefs":["PMID:10859382"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host cytokine production (obsolete GO:0046775)","synonyms":[{"name":"negative regulation by virus of host cytokine production","type":"exact"}],"termid":"GO:0046775"}


id: GO:0031055
data:
  {"annotated_genes":["SJAG_04696","SJAG_04989","SJAG_02908","SJAG_00307","SJAG_00045","SJAG_03905","SJAG_04547","SJAG_02119","SJAG_00684","SJAG_00756","SJAG_01611","SJAG_03867","SJAG_00873","SJAG_05273","SJAG_02303","SJAG_03619","SJAG_04038","SJAG_02872","SJAG_04581","SJAG_03183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94456,70003,99151,107098,113963,98899,116210,95227,117438,88632,71213,89827,79680,114823,112858,92557,101820,102658,118556,106121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034080"}]},"cv_name":"biological_process","definition":"Dynamic structural changes in centromeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00307":null,"SJAG_00684":null,"SJAG_00756":null,"SJAG_00873":null,"SJAG_01611":null,"SJAG_02119":null,"SJAG_02303":null,"SJAG_02872":null,"SJAG_02908":null,"SJAG_03183":null,"SJAG_03619":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04547":null,"SJAG_04581":null,"SJAG_04696":null,"SJAG_04989":null,"SJAG_05273":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"chromatin remodeling at centromere","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromatin remodelling at centromere","type":"exact"}],"termid":"GO:0031055","terms_by_termid":{"GO:0034080":null}}


id: MONDO:0017592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcal infection","termid":"MONDO:0024313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal toxemia","secondary_identifiers":["MEDGEN:799765","UMLS:C0854511","GARD:21239","Orphanet:300579","MedDRA:10041932"],"termid":"MONDO:0017592","xrefs":{"Monarch":{"xref_id":"0017592"}}}


id: PBO:0027064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_localization_phenotype","termid":"PBO:0027064"}


id: GO:0005070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively and non-covalently and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68).","definition_xrefs":["GOC:so","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SH3/SH2 adaptor activity (obsolete GO:0005070)","synonyms":[{"name":"SH3/SH2 adaptor protein activity","type":"narrow"}],"termid":"GO:0005070"}


id: PBO:0079895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 4","termid":"PBO:0079895"}


id: MONDO:0100150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the musculoskeletal system caused by pathogenic variants in the RYR1 gene, which encodes the ryanodine receptor type 1 protein. These variants are associated with a variety of overlapping features characterized by symmetric proximal muscle weakness, often with pronounced facial weakness with or without dysmorphism and ophthalmoparesis/ophthalmoplegia with ptosis, bulbar weakness, significant respiratory involvement, severe neonatal hypotonia, scoliosis, orthopedic deformities including arthrogryposis, hip dislocation, club feet, and King Denborough syndrome (pectus carinatum or excavatum, short stature, joint contractures, facial and skeletal deformities), malignant hyperthermia susceptibility, anesthesia-induced rhabdomyolysis, fatigue, exercise-induced hyperthermia/exertional heat stroke, and exertional myalgia. Histologic findings on skeletal muscle biopsy reveal a wide range of structural abnormalities and can include central core disease, multiminicore disease, cone-rod myopathy, centronuclear myopathy, and congenital fiber-type disproportion.","definition_xrefs":["PMID:30406384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"RYR1-related myopathy","synonyms":[{"name":"RYR1-related disease","type":"broad"},{"name":"RYR1-related disorder","type":"broad"},{"name":"RYR1-related myopathy","type":"exact"}],"termid":"MONDO:0100150","xrefs":{"Monarch":{"xref_id":"0100150"}}}


id: GO:0150014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the apical pole of a neuron, and which is farthest away from the neuronal cell body (the soma).","definition_xrefs":["GOC:aruk","GO:bc","PMID:1720142","PMID:20629984","PMID:9214543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical dendrite","termid":"GO:0097440"},{"relation_name":"is_a","term_name":"distal dendrite","termid":"GO:0150002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical distal dendrite","termid":"GO:0150014"}


id: PBO:0112881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate dehydrogenase adaptor subunit Ymr31/Kgd4","termid":"PBO:0112881"}


id: PBO:0073917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A6 pseudogene 1","termid":"PBO:0073917"}


id: PBO:0041244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 122","termid":"PBO:0041244"}


id: GO:0042121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"alginic acid metabolic process","termid":"GO:0042120"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"alginic acid biosynthetic process","synonyms":[{"name":"alginate biosynthesis","type":"exact"},{"name":"alginate biosynthetic process","type":"exact"},{"name":"alginic acid anabolism","type":"exact"},{"name":"alginic acid biosynthesis","type":"exact"},{"name":"alginic acid formation","type":"exact"},{"name":"alginic acid synthesis","type":"exact"}],"termid":"GO:0042121"}


id: PBO:0080114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV radiation resistance associated","termid":"PBO:0080114"}


id: MONDO:0957231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte/zygote/embryo maturation arrest 19","secondary_identifiers":["MEDGEN:1841078","UMLS:C5830442","OMIM:620333"],"termid":"MONDO:0957231","xrefs":{"Monarch":{"xref_id":"0957231"}}}


id: PBO:0049179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GREB1L divergent transcript","termid":"PBO:0049179"}


id: PBO:0018023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter, predicted Meu22","termid":"PBO:0018023"}


id: PBO:0041556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 44","termid":"PBO:0041556"}


id: PBO:0053205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 3 binding protein","termid":"PBO:0053205"}


id: MONDO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A finding of an excessive amount of fat in the stool.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"steatorrhea","secondary_identifiers":["MESH:D045602","HP:0002570","MEDGEN:20948","NCIT:C86917","SCTID:27868004","UMLS:C0038238","DOID:10602"],"synonyms":[{"name":"fatty stool","type":"exact"},{"name":"fatty stool (finding)","type":"exact"},{"name":"steatorrhea","type":"exact"},{"name":"steatorrhea (disease)","type":"exact"}],"termid":"MONDO:0001075","xrefs":{"Monarch":{"xref_id":"0001075"}}}


id: GO:0035263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sex-specific patterns of primoridia growth and differentiation in the genital imaginal disc. The anal primordium of the genital disc develops in both sexes, but depending on the genetic sex gives rise to either male or female analia. Depending on the genetic sex, only one of the two genital primordia develop. In females the female genital primordium develops and gives rise to the female genitalia whereas the male primordium is repressed. Conversely, in males the male genital primordium develops and gives rise to the male genitalia whereas the female genital primordium is repressed.","definition_xrefs":["PMID:11494318","PMID:11702781","PMID:11290302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc sexually dimorphic development","termid":"GO:0035263"}


id: PBO:0066874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 174","termid":"PBO:0066874"}


id: PBO:0044858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 4-desaturase, sphingolipid 1","termid":"PBO:0044858"}


id: MONDO:0013885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare multisystemic genetic disorder characterized by a characteristic facial features with macrocephaly, overgrowth in infancy, intellectual disability and behavioral problems including anxieties and aggressiveness.","definition_xrefs":["Orphanet:420179"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Sotos syndrome","termid":"MONDO:0019349"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Malan overgrowth syndrome","secondary_identifiers":["OMIM:614753","SCTID:763795006","MEDGEN:766574","DOID:0112102","UMLS:C3553660","GARD:13811"],"synonyms":[{"name":"Malan syndrome","type":"related"},{"name":"SOTOS2","type":"related"},{"name":"Sotos syndrome 2","type":"exact"},{"name":"Sotos syndrome type 2","type":"exact"}],"termid":"MONDO:0013885","xrefs":{"Monarch":{"xref_id":"0013885"}}}


id: GO:0043911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysine + 2-oxoglutarate = L-glutamate + 6-amino-2-oxohexanoate.","definition_xrefs":["GOC:jl","PMID:17259313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"D-lysine transaminase activity","synonyms":[{"name":"D-lysine aminotransferase activity","type":"exact"}],"termid":"GO:0043911"}


id: PBO:0074084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 1","termid":"PBO:0074084"}


id: GO:1903535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lactose biosynthetic process.","definition_xrefs":["PMID:12018418","GO_REF:0000058","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of lactose biosynthetic process","termid":"GO:1903534"},{"relation_name":"negatively_regulates","term_name":"lactose biosynthetic process","termid":"GO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of lactose biosynthetic process","synonyms":[{"name":"down regulation of lactose anabolism","type":"exact"},{"name":"down regulation of lactose biosynthesis","type":"exact"},{"name":"down regulation of lactose biosynthetic process","type":"exact"},{"name":"down regulation of lactose formation","type":"exact"},{"name":"down regulation of lactose synthesis","type":"exact"},{"name":"down-regulation of lactose anabolism","type":"exact"},{"name":"down-regulation of lactose biosynthesis","type":"exact"},{"name":"down-regulation of lactose biosynthetic process","type":"exact"},{"name":"down-regulation of lactose formation","type":"exact"},{"name":"down-regulation of lactose synthesis","type":"exact"},{"name":"downregulation of lactose anabolism","type":"exact"},{"name":"downregulation of lactose biosynthesis","type":"exact"},{"name":"downregulation of lactose biosynthetic process","type":"exact"},{"name":"downregulation of lactose formation","type":"exact"},{"name":"downregulation of lactose synthesis","type":"exact"},{"name":"inhibition of lactose anabolism","type":"narrow"},{"name":"inhibition of lactose biosynthesis","type":"narrow"},{"name":"inhibition of lactose biosynthetic process","type":"narrow"},{"name":"inhibition of lactose formation","type":"narrow"},{"name":"inhibition of lactose synthesis","type":"narrow"},{"name":"negative regulation of lactose anabolism","type":"exact"},{"name":"negative regulation of lactose biosynthesis","type":"exact"},{"name":"negative regulation of lactose formation","type":"exact"},{"name":"negative regulation of lactose synthesis","type":"exact"}],"termid":"GO:1903535"}


id: MONDO:0032816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with ataxia, hypotonia, and microcephaly","secondary_identifiers":["OMIM:618569","UMLS:C5231413","GARD:18519","MEDGEN:1684871"],"synonyms":[{"name":"NEDAHM","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH ATAXIA, HYPOTONIA, AND MICROCEPHALY","type":"related"}],"termid":"MONDO:0032816","xrefs":{"Monarch":{"xref_id":"0032816"}}}


id: PBO:0087435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit D of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; plays a role in the coupling of proton transport and ATP hydrolysis; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087435"}


id: PBO:0048578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 2, pseudogene","termid":"PBO:0048578"}


id: MONDO:0019396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare glomerular disease characterized by abnormal accumulation of type III collagen within the mesangium and subendothelial space of the glomerulus. Clinically it usually manifests with proteinuria (often in the nephrotic range), microscopic hematuria, peripheral edema and/or hypertension. In some cases progression to end-stage renal failure is observed.","definition_xrefs":["Orphanet:84087"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerular disorder","termid":"MONDO:0019722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"collagen type III glomerulopathy","secondary_identifiers":["ICD9:583.89","SCTID:708127008","MEDGEN:836996","GARD:19048","UMLS:C3872695"],"synonyms":[{"name":"Collagenofibrotic glomerulopathy","type":"exact"}],"termid":"MONDO:0019396","xrefs":{"Monarch":{"xref_id":"0019396"}}}


id: MOD:00080
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N5-methyl-L-glutamine.","definition_xrefs":["PubMed:11118225","RESID:AA0071","PubMed:365579","PubMed:11875433","ChEBI:17592","DeltaMass:166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"monomethylated L-glutamine","termid":"MOD:00722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N5-methyl-L-glutamine","synonyms":[{"name":"(2S)-2-amino-5-methylamino-5-oxopentanoic acid","type":"exact"},{"name":"2-amino-N5-methylpentanediamic acid","type":"exact"},{"name":"MOD_RES N5-methylglutamine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(delta)-methylglutamine","type":"exact"},{"name":"N-methylglutamine","type":"exact"},{"name":"N5-methyl-L-glutamine","type":"exact"},{"name":"N5-methylated L-glutamine","type":"exact"},{"name":"N5Me1Gln","type":"exact"},{"name":"gamma-methylglutamine","type":"exact"}],"termid":"MOD:00080"}


id: PATO:0002433
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape marked by large amounts of relief, often with multiple ridges and grooves in close association. Topographically complex.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sculpted surface","termid":"PATO:0002433"}


id: PBO:0041536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 67","termid":"PBO:0041536"}


id: MONDO:0030376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Martsolf syndrome","termid":"MONDO:0023910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Martsolf syndrome 2","secondary_identifiers":["UMLS:C5543626","MEDGEN:1779703","OMIM:619420"],"synonyms":[{"name":"MARTS2","type":"exact"}],"termid":"MONDO:0030376","xrefs":{"Monarch":{"xref_id":"0030376"}}}


id: MONDO:0957812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 112","secondary_identifiers":["MEDGEN:1845523","OMIM:620537","UMLS:C5882700"],"termid":"MONDO:0957812","xrefs":{"Monarch":{"xref_id":"0957812"}}}


id: GO:0019492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces the amino acid proline from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline biosynthetic process","termid":"GO:0006561"},{"relation_name":"is_a","term_name":"amino acid salvage","termid":"GO:0043102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"proline salvage","synonyms":[{"name":"proline cycling","type":"exact"}],"termid":"GO:0019492"}


id: GO:0047142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidized glutathione + [xanthine dehydrogenase] = reduced glutathione + xanthine-oxidase.","definition_xrefs":["EC:1.8.4.7","MetaCyc:1.8.4.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"enzyme-thiol transhydrogenase (glutathione-disulfide) activity","synonyms":[{"name":"[xanthine-dehydrogenase]:oxidized-glutathione S-oxidoreductase activity","type":"related"},{"name":"enzyme-thiol transhydrogenase (glutathione-disulphide) activity","type":"exact"},{"name":"enzyme-thiol transhydrogenase (oxidized-glutathione) activity","type":"exact"},{"name":"glutathione-dependent thiol:disulfide oxidoreductase activity","type":"related"},{"name":"thiol:disulfide oxidoreductase activity","type":"related"},{"name":"thiol:disulphide oxidoreductase activity","type":"related"},{"name":"xanthine-dehydrogenase:glutathione-disulfide S-oxidoreductase activity","type":"related"},{"name":"xanthine-dehydrogenase:oxidized-glutathione S-oxidoreductase activity","type":"related"}],"termid":"GO:0047142"}


id: GO:0016691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R-H + 2 chloride + H2O2 = 2 R-Cl + 2 H2O.","definition_xrefs":["EC:1.11.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"haloperoxidase activity","termid":"GO:0140905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"chloride peroxidase activity","secondary_identifiers":["GO:0016955","GO:0016958","GO:0016956","GO:0016957","MetaCyc:CHLORIDE-PEROXIDASE-RXN"],"synonyms":[{"name":"chloride:hydrogen-peroxide oxidoreductase","type":"related"},{"name":"chloroperoxidase activity","type":"related"},{"name":"cofactor-free chloroperoxidase activity","type":"narrow"},{"name":"flavin-haem chloroperoxidase activity","type":"narrow"},{"name":"flavin-heme chloroperoxidase activity","type":"narrow"},{"name":"haem chloroperoxidase activity","type":"narrow"},{"name":"heme chloroperoxidase activity","type":"narrow"},{"name":"vanadium chloroperoxidase activity","type":"narrow"}],"termid":"GO:0016691"}


id: GO:0047153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dCMP + H2O = (6S)-5,6,7,8-tetrahydrofolate + 5-hydroxymethyldeoxycytidylate.","definition_xrefs":["EC:2.1.2.8","RHEA:11280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"deoxycytidylate 5-hydroxymethyltransferase activity","secondary_identifiers":["MetaCyc:2.1.2.8-RXN","KEGG_REACTION:R01669"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:deoxycytidylate 5-hydroxymethyltransferase activity","type":"related"},{"name":"d-cytidine 5'-monophosphate hydroxymethylase activity","type":"related"},{"name":"dCMP hydroxymethylase activity","type":"related"},{"name":"deoxyCMP hydroxymethylase activity","type":"related"},{"name":"deoxycytidylate hydroxymethylase activity","type":"related"},{"name":"deoxycytidylate hydroxymethyltransferase activity","type":"exact"},{"name":"deoxycytidylic hydroxymethylase activity","type":"related"}],"termid":"GO:0047153"}


id: PATO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to shrink or contract.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractility","termid":"PATO:0001579"}


id: MONDO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malaria is a serious and sometimes fatal disease caused by a parasite that commonly infects a certain type of mosquito which feeds on humans. Infection with malaria parasites may result in a wide variety of symptoms, ranging from absent or very mild symptoms to severe disease and even death. People who get malaria are typically very sick with high fevers, shaking chills, and flu-like illness. In general, malaria is a curable disease if diagnosed and treated promptly and correctly.Treatment depends on many factors including disease severity, the species of malaria parasite causing the infection and the part of the world in which the infection was acquired.","direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"erythrocyte disorder","termid":"MONDO:0044347"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"malaria","secondary_identifiers":["MedDRA:10025487","ICD9:084.6","Orphanet:673","NCIT:C34797","icd11.foundation:1439886552","ICD9:084","DOID:12365","ICD10CM:B53.0","NORD:1395","UMLS:C0024530","ICD10CM:B53","SCTID:61462000","EFO:0001068","MEDGEN:7443","GARD:6961","MESH:D008288"],"synonyms":[{"name":"plasmodiosis","type":"related"}],"termid":"MONDO:0005136","xrefs":{"Monarch":{"xref_id":"0005136"}}}


id: PBO:0051796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing K","termid":"PBO:0051796"}


id: PBO:0052554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor F1","termid":"PBO:0052554"}


id: GO:0004180
data:
  {"annotated_genes":["SJAG_01481","SJAG_01868","SJAG_00975","SJAG_02117","SJAG_03586","SJAG_04819","SJAG_00451"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72641],"is_not":false,"summary":null,"term":"GO:0004180"},{"annotations":[74344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016807"},{"annotations":[74055,57984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004181"},{"annotations":[79201,75142,76187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single C-terminal amino acid residue from a polypeptide chain.","direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00451":null,"SJAG_00975":null,"SJAG_01481":null,"SJAG_01868":null,"SJAG_02117":null,"SJAG_03586":null,"SJAG_04819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0003824","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"carboxypeptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1247910","RHEA:28783","Reactome:R-HSA-9753632"],"termid":"GO:0004180","terms_by_termid":{"GO:0004180":null,"GO:0004181":null,"GO:0004185":null,"GO:0016807":null}}


