# terms

id: PBO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nifs homolog, possible cysteine desulfurase","termid":"PBO:0000143"}


id: GO:0047626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + H2O = S-methyl-5'-thioadenosine + L-homoserine + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adenosylmethionine hydrolase activity (obsolete GO:0047626)","synonyms":[{"name":"adenosyl methionine hydrolase activity","type":"exact"}],"termid":"GO:0047626"}


id: GO:0140609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions or pathway resulting in the formation of phycocyanobilin, which involves the oxidative cleavage of heme by a heme oxygenase (HO) to form biliverdin IX alpha. Biliverdin IX alpha is subsequently converted to phycocyanobilin by a ferredoxin-dependent oxidoreductase (PCYA).","definition_xrefs":["PMID:23345435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"phycocyanobilin biosynthetic process","synonyms":[{"name":"phycocyanobilin biosynthesis","type":"exact"}],"termid":"GO:0140609"}


id: GO:2001032
data:
  {"annotated_genes":["SJAG_03048","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[107159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of NHEJ","type":"exact"}],"termid":"GO:2001032","terms_by_termid":{"GO:2001033":null,"GO:2001034":null}}


id: PBO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.13.19","termid":"PBO:0002058"}


id: PBO:0056668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 6","termid":"PBO:0056668"}


id: MONDO:0002319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic disorder that affects the phosphate homeostasis.","definition_xrefs":["NCIT:C97095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"phosphorus metabolism disease","secondary_identifiers":["ICD9:275.3","UMLS:C0031707","MEDGEN:19276","SCTID:87049008","MESH:D010760","DOID:2485","ICD10CM:E83.3"],"synonyms":[{"name":"disorder of phosphorus metabolism","type":"exact"},{"name":"phosphorus disorder","type":"exact"},{"name":"phosphorus metabolic disorder","type":"exact"},{"name":"phosphorus metabolism disorder","type":"exact"}],"termid":"MONDO:0002319","xrefs":{"Monarch":{"xref_id":"0002319"}}}


id: GO:0015752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-ribose is transported across a lipid bilayer, from one side of a membrane to the other. As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"D-ribose transmembrane transport","synonyms":[{"name":"D-ribose transport","type":"related"}],"termid":"GO:0015752"}


id: PBO:0059080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoacylglycerol O-acyltransferase 3","termid":"PBO:0059080"}


id: MONDO:0021777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pancarditis, involving inflammation of the endocardium, myocardium, and epicardium. It results from an autoimmune reaction following an infection with Streptococcus pyogenes (Group A Streptococci).","definition_xrefs":["NCIT:C34985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic heart disease","termid":"MONDO:0006955"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute rheumatic heart disease","secondary_identifiers":["ICD9:391.8","MEDGEN:19779","SCTID:312591002","ICD9:391.9","UMLS:C0035440"],"synonyms":[{"name":"Active rheumatic fever with heart involvement","type":"related"},{"name":"active rheumatic fever with heart involvement","type":"related"},{"name":"acute Rheumatic Heart Disease","type":"related"},{"name":"acute rheumatic carditis","type":"related"},{"name":"acute rheumatic fever with heart involvement","type":"related"},{"name":"acute rheumatic heart disease","type":"exact"}],"termid":"MONDO:0021777","xrefs":{"Monarch":{"xref_id":"0021777"}}}


id: PBO:0085229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of the CCR4-NOT transcriptional regulatory complex; involved in controlling mRNA initiation, elongation, and degradation; contains a PH-like domain; CAF120 has a paralog, SKG3, that arose from the whole genome duplication","termid":"PBO:0085229"}


id: PBO:0071420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 26","termid":"PBO:0071420"}


id: PBO:0080332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 96 pseudogene","termid":"PBO:0080332"}


id: PBO:0110062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3128 family, human c22orf39 ortholog, implicated in gene expression","termid":"PBO:0110062"}


id: MONDO:0003402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-seminomatous malignant germ cell tumor arising from the testis. It affects infants, young children, and postpubertal males. It is the most frequently seen testicular neoplasm during childhood. The vast majority of patients present with an asymptomatic scrotal mass. The tumor mimics the yolk sac of the embryo and produces alpha-fetoprotein (AFP). It metastasizes to distant anatomic sites. Prognostic factors relate to the clinical stage and the degree of AFP elevation.","definition_xrefs":["NCIT:C8000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular pure germ cell tumor","termid":"MONDO:0002874"},{"relation_name":"is_a","term_name":"testicular non-seminomatous germ cell cancer","termid":"MONDO:0003403"},{"relation_name":"is_a","term_name":"yolk sac tumor","termid":"MONDO:0005744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular yolk sac tumor","secondary_identifiers":["MEDGEN:79028","UMLS:C0279708","DOID:5344","ONCOTREE:TYST","EFO:1000574"],"synonyms":[{"name":"Orchidoblastoma","type":"related"},{"name":"endodermal sinus neoplasm of testis","type":"related"},{"name":"endodermal sinus neoplasm of the testis","type":"related"},{"name":"endodermal sinus tumor of testis","type":"related"},{"name":"endodermal sinus tumor of the testis","type":"related"},{"name":"endodermal sinus tumour of testis","type":"related"},{"name":"endodermal sinus tumour of the testis","type":"related"},{"name":"endodermal-sinus tumor","type":"related"},{"name":"endodermal-sinus tumour","type":"related"},{"name":"testicular endodermal sinus neoplasm","type":"related"},{"name":"testicular endodermal sinus tumor","type":"related"},{"name":"testicular endodermal sinus tumour","type":"related"},{"name":"testicular yolk Sac neoplasm","type":"exact"},{"name":"testicular yolk sac tumor","type":"exact"},{"name":"testis yolk sac tumor","type":"exact"},{"name":"testis yolk sac tumour","type":"exact"},{"name":"yolk Sac neoplasm of testis","type":"related"},{"name":"yolk Sac neoplasm of the testis","type":"related"},{"name":"yolk Sac tumor of testis","type":"related"},{"name":"yolk Sac tumor of the testis","type":"related"},{"name":"yolk Sac tumour of testis","type":"related"},{"name":"yolk Sac tumour of the testis","type":"related"},{"name":"yolk sac tumor","type":"related"},{"name":"yolk sac tumour","type":"related"}],"termid":"MONDO:0003402","xrefs":{"Monarch":{"xref_id":"0003402"}}}


id: FYPO:0002072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a prospore has a nucleus in an abnormal location. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"output_of","term_name":"abnormal nucleus positioning in prospore","termid":"FYPO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized nucleus in prospore","synonyms":[{"name":"abnormal nucleus location in prospore","type":"exact"},{"name":"abnormal nucleus position in prospore","type":"exact"},{"name":"displaced nucleus in prospore","type":"exact"},{"name":"displaced nucleus prospore","type":"exact"},{"name":"mislocalised nucleus in prospore","type":"exact"},{"name":"mislocalized nucleus in forespore","type":"exact"},{"name":"mislocalized prospore nucleus","type":"exact"},{"name":"misplaced prospore nuclei","type":"exact"},{"name":"misplaced prospore nucleus","type":"exact"},{"name":"nuclear displacement in prospore","type":"exact"}],"termid":"FYPO:0002072"}


id: PBO:0054773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2185","termid":"PBO:0054773"}


id: PBO:0028445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_midzone_during_anaphase_B","termid":"PBO:0028445"}


id: MONDO:0020424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intramural coronary arterial course is a rare coronary artery congenital malformation disorder characterized by an atypical course of a coronary artery (usually proximal left anterior descending artery) in which, for a variable length, the artery runs intramyocardally. Depending on the artery and length of segment involved, patients may be asymptomatic or may present variable manifestations ranging from atypical angina to sudden death.","definition_xrefs":["Orphanet:99088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intramural coronary arterial course","secondary_identifiers":["UMLS:C0345123","MEDGEN:576769"],"termid":"MONDO:0020424","xrefs":{"Monarch":{"xref_id":"0020424"}}}


id: PBO:0088735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Cwf4","termid":"PBO:0088735"}


id: PBO:0052038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jun proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0052038"}


id: MONDO:1011525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, sheep","secondary_identifiers":["OMIA:000437-9940"],"termid":"MONDO:1011525","xrefs":{"Monarch":{"xref_id":"1011525"}}}


id: PBO:0088703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP4 subunit Gfh1","termid":"PBO:0088703"}


id: MONDO:0016015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratologic disorder associated with intrauterine exposure of phenorbarbital during the first trimester of pregnancy. Infants are usually asymptomatic but an increased risk of intellectual disability, tetralogy of Fallot, unilateral cleft lip, hypoplasia of the mitral valve and some other mild abnormalities such as hypertelorism, epicanthus, hypoplasia and low insertion of the nose, low insertion of the ears, prognathism, ﬁnger hypoplasia, brachydactyly and hypospadias have been reported in rare cases.","definition_xrefs":["Orphanet:1919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenobarbital embryopathy","secondary_identifiers":["GARD:4315","SCTID:715431002","icd11.foundation:1602901948","MEDGEN:895102","UMLS:C4275281"],"synonyms":[{"name":"phenobarbital antenatal exposure","type":"related"}],"termid":"MONDO:0016015","xrefs":{"Monarch":{"xref_id":"0016015"}}}


id: PBO:0051033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 2","termid":"PBO:0051033"}


id: PBO:0068206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 513","termid":"PBO:0068206"}


id: PR:O94319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SEC13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03972","PANTHER:PTHR11024:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.15","secondary_identifiers":["UniProtKB:O94319"],"synonyms":[{"name":"Spom972h-SEC13","type":"exact"}],"termid":"PR:O94319"}


id: PBO:0080799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 5","termid":"PBO:0080799"}


id: PBO:0011997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase subunit A (predicted)","termid":"PBO:0011997"}


id: FYPO:0001878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable but is elongated and has an abnormally low thickness or diameter.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable thin vegetative cell","termid":"FYPO:0001877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"viable thin, elongated vegetative cell","synonyms":[{"name":"thin, elongated viable cell during vegetative growth","type":"exact"},{"name":"thin, elongated viable vegetative cell","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell diameter","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell thickness","type":"exact"},{"name":"viable elongated vegetative cell with decreased cell width","type":"exact"},{"name":"viable thin, elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001878"}


id: PBO:0070920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 28","termid":"PBO:0070920"}


id: PBO:0061366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 26","termid":"PBO:0061366"}


id: MONDO:1010943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycosis fungoides that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine cutaneous t-cell lymphoma","termid":"MONDO:0700169"},{"relation_name":"is_a","term_name":"mycosis fungoides, non-human animal","termid":"MONDO:1010211"},{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, dog","termid":"MONDO:1010948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycosis fungoides, dog","secondary_identifiers":["OMIA:001109-9615"],"termid":"MONDO:1010943","xrefs":{"Monarch":{"xref_id":"1010943"}}}


id: GO:0032526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to retinoic acid","synonyms":[{"name":"response to vitamin A acid","type":"exact"}],"termid":"GO:0032526"}


id: MONDO:0024464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined pituitary hormone deficiencies, genetic form in which the cause of the disease is a mutation in the POU1F1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"pituitary hormone deficiency, combined, 1","secondary_identifiers":["GARD:10601","MEDGEN:414421","MESH:C567803","OMIM:613038","UMLS:C2751608"],"synonyms":[{"name":"CPHD1","type":"exact"},{"name":"POU1F1 combined pituitary hormone deficiencies, genetic form","type":"exact"},{"name":"combined pituitary hormone deficiencies, genetic form caused by mutation in POU1F1","type":"exact"},{"name":"pituitary hormone deficiency, combined 1","type":"related"},{"name":"pituitary hormone deficiency, combined or isolated, 1","type":"exact"},{"name":"pituitary hormone deficiency, combined, 1","type":"exact"}],"termid":"MONDO:0024464","xrefs":{"Monarch":{"xref_id":"0024464"}}}


id: MONDO:0032643
data:
  {"annotated_genes":["SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86028],"is_not":false,"summary":null,"term":"MONDO:0032643"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648343","DOID:0112327","OMIM:618266","Orphanet:611256","GARD:18030","UMLS:C4748873"],"synonyms":[{"name":"COASY-related pontocerebellar hypoplasia","type":"exact"},{"name":"PCH12","type":"exact"},{"name":"PONTOCEREBELLAR HYPOPLASIA, TYPE 12","type":"exact"}],"termid":"MONDO:0032643","terms_by_termid":{"MONDO:0032643":null},"xrefs":{"Monarch":{"xref_id":"0032643"}}}


id: GO:0048014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an angiopoietin binding to the Tie receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11283723","PMID:11566266","GOC:ceb","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Tie signaling pathway","synonyms":[{"name":"Tek receptor signaling","type":"exact"},{"name":"Tie receptor signaling pathway","type":"exact"},{"name":"Tie receptor signalling pathway","type":"exact"},{"name":"angiopoietin-Tie signaling pathway","type":"narrow"},{"name":"angiopoietin/Tie signaling pathway","type":"narrow"}],"termid":"GO:0048014"}


id: PBO:0067694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 2","termid":"PBO:0067694"}


id: GO:0031867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP4 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"EP4 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP4 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP4 receptor binding","type":"exact"}],"termid":"GO:0031867"}


id: GO:0051719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing CpN = S-adenosyl-L-homocysteine + DNA containing 5-MeCpN.","definition_xrefs":["PMID:15689527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates","secondary_identifiers":["Reactome:R-HSA-9845308","Reactome:R-HSA-5334097","Reactome:R-HSA-5334152"],"termid":"GO:0051719"}


id: PBO:0041107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"barttin CLCNK type accessory subunit beta","termid":"PBO:0041107"}


id: MONDO:0007960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete megacystis-microcolon-intestinal hypoperistalsis syndrome (obsolete MONDO:0007960)","secondary_identifiers":["NANDO:2200947","NANDO:1200459"],"termid":"MONDO:0007960","xrefs":{"Monarch":{"xref_id":"0007960"}}}


id: MONDO:0008698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A finding indicating the lack of adequate relaxation of the lower esophageal sphincter resulting in difficulty swallowing food.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"idiopathic achalasia","termid":"MONDO:0019635"},{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"achalasia","secondary_identifiers":["ICD9:530.0","DOID:9164","SCTID:235630008","HP:0002571","icd11.foundation:636464846","UMLS:C0014848","MEDGEN:5023"],"synonyms":[{"name":"achalasia","type":"exact"},{"name":"achalasia (disease)","type":"exact"},{"name":"achalasia of cardia","type":"exact"},{"name":"achalasia of esophagus","type":"exact"},{"name":"achalasia of oesophagus","type":"exact"},{"name":"cardiospasm","type":"exact"},{"name":"esophageal achalasia","type":"exact"},{"name":"hypertensive lower esophageal sphincter","type":"exact"},{"name":"lack of reflex relaxation of lower oesophageal sphincter","type":"exact"}],"termid":"MONDO:0008698","xrefs":{"Monarch":{"xref_id":"0008698"}}}


id: PBO:0057085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181d","termid":"PBO:0057085"}


id: PBO:0049577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone A","termid":"PBO:0049577"}


id: GO:1901231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901231)","synonyms":[{"name":"activation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"narrow"},{"name":"activation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"narrow"},{"name":"positive regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"positive regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"positive regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"},{"name":"up regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"up regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"up-regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"up-regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"upregulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"upregulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"}],"termid":"GO:1901231"}


id: MONDO:0012625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the NR2E3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 37","secondary_identifiers":["MESH:C567005","ICD10CM:H35.5","GARD:15508","DOID:0110399","MEDGEN:410004","OMIM:611131","UMLS:C1970163"],"synonyms":[{"name":"NR2E3 retinitis pigmentosa","type":"exact"},{"name":"RP37","type":"exact"},{"name":"retinitis pigmentosa 37","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in NR2E3","type":"exact"},{"name":"retinitis pigmentosa type 37","type":"exact"}],"termid":"MONDO:0012625","xrefs":{"Monarch":{"xref_id":"0012625"}}}


id: PBO:0013461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl protein thioesterase/ dolichol pyrophosphate phosphatase fusion protein Pdf1","termid":"PBO:0013461"}


id: PBO:0049494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 1","termid":"PBO:0049494"}


id: PATO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally dorsal structures.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsalized","termid":"PATO:0000620"}


id: MONDO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mu chain disease (obsolete MONDO:0000658)","termid":"MONDO:0000658","xrefs":{"Monarch":{"xref_id":"0000658"}}}


id: PBO:0064927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 regulatory subunit 1","termid":"PBO:0064927"}


id: MONDO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal cystitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute cystitis","termid":"MONDO:0001650"},{"relation_name":"is_a","term_name":"gonococcal cystitis","termid":"MONDO:0021160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal cystitis","secondary_identifiers":["UMLS:C0153191","DOID:13690","MEDGEN:509193","SCTID:24868007","ICD9:098.11"],"synonyms":[{"name":"acute gonorrhea of bladder","type":"exact"},{"name":"acute gonorrhoea of bladder","type":"exact"},{"name":"gonococcal cystitis (acute)","type":"exact"},{"name":"gonococcal cystitis, acute","type":"exact"}],"termid":"MONDO:0001777","xrefs":{"Monarch":{"xref_id":"0001777"}}}


id: PBO:0089128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein/dubious","termid":"PBO:0089128"}


id: GO:0102731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,2,3,4,6-pentakisphosphate + ADP + H+.","definition_xrefs":["MetaCyc:RXN-7185","PMID:16107538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"inositol-1,3,4,6-tetrakisphosphate 2-kinase activity","synonyms":[{"name":"D-myo-inositol (1,3,4,6)-tetrakisphosphate 2-kinase activity","type":"exact"}],"termid":"GO:0102731"}


id: MONDO:0016562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PSP-Pure akinesia with gait freezing (PSP-PAGF) is an atypical variant of progressive supranuclear palsy (PSP), a rare late-onset neurodegenerative disease.","definition_xrefs":["Orphanet:240094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical progressive supranuclear palsy syndrome","termid":"MONDO:0020488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"progressive supranuclear palsy-pure akinesia with gait freezing syndrome","secondary_identifiers":["UMLS:C5679851","GARD:20647","MEDGEN:1843032"],"synonyms":[{"name":"PSP-PAGF","type":"exact"},{"name":"PSP-pure akinesia with gait freezing","type":"exact"}],"termid":"MONDO:0016562","xrefs":{"Monarch":{"xref_id":"0016562"}}}


id: GO:1905862
data:
  {"annotated_genes":["SJAG_04675","SJAG_04677"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77302,77674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of ferroxidase activity.","definition_xrefs":["GO_REF:0000088","PMID:16522632","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04675":null,"SJAG_04677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ferroxidase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1905862","terms_by_termid":{"GO:0033573":null}}


id: MONDO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the frontal sinus.","direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"frontal sinus neoplasm","termid":"MONDO:0001757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"frontal sinus cancer","secondary_identifiers":["DOID:1360","SCTID:363427000","ICD10CM:C31.2","NCIT:C3542","MEDGEN:57786","UMLS:C0153478","ICD9:160.4"],"synonyms":[{"name":"cancer of frontal sinus","type":"exact"},{"name":"frontal sinus cancer","type":"exact"},{"name":"malignant frontal sinus neoplasm","type":"exact"},{"name":"malignant frontal sinus tumor","type":"exact"},{"name":"malignant frontal sinus tumour","type":"exact"},{"name":"malignant neoplasm of frontal sinus","type":"exact"},{"name":"malignant neoplasm of the frontal sinus","type":"exact"},{"name":"malignant tumor of frontal sinus","type":"exact"},{"name":"malignant tumor of the frontal sinus","type":"exact"},{"name":"malignant tumour of frontal sinus","type":"exact"},{"name":"malignant tumour of the frontal sinus","type":"exact"}],"termid":"MONDO:0001756","xrefs":{"Monarch":{"xref_id":"0001756"}}}


id: PBO:0052684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 52","termid":"PBO:0052684"}


id: GO:0050686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mRNA processing.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"is_a","term_name":"negative regulation of mRNA metabolic process","termid":"GO:1903312"},{"relation_name":"negatively_regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"negative regulation of mRNA processing","synonyms":[{"name":"down regulation of mRNA processing","type":"exact"},{"name":"down-regulation of mRNA processing","type":"exact"},{"name":"downregulation of mRNA processing","type":"exact"},{"name":"inhibition of mRNA processing","type":"narrow"}],"termid":"GO:0050686"}


id: MONDO:0014807
data:
  {"annotated_genes":["SJAG_03106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85580],"is_not":false,"summary":null,"term":"MONDO:0014807"}]},"cv_name":"mondo","definition":"Any prenatal-onset spinal muscular atrophy with congenital bone fractures in which the cause of the disease is a mutation in the ASCC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenatal-onset spinal muscular atrophy with congenital bone fractures","termid":"MONDO:0000209"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03106":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"spinal muscular atrophy with congenital bone fractures 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18495","MEDGEN:907910","OMIM:616867","UMLS:C4225176"],"synonyms":[{"name":"ASCC1 prenatal-onset spinal muscular atrophy with congenital bone fractures","type":"exact"},{"name":"SMABF2","type":"exact"},{"name":"prenatal-onset spinal muscular atrophy with congenital bone fractures caused by mutation in ASCC1","type":"exact"},{"name":"spinal muscular atrophy with congenital bone fractures 2","type":"exact"},{"name":"spinal muscular atrophy with congenital bone fractures type 2","type":"exact"}],"termid":"MONDO:0014807","terms_by_termid":{"MONDO:0014807":null},"xrefs":{"Monarch":{"xref_id":"0014807"}}}


id: MONDO:0024251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological syndrome caused by severe mercury poisoning.","definition_xrefs":["Wikipedia:Minamata_disease"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mercury poisoning","termid":"MONDO:0018020"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minamata disease","secondary_identifiers":["UMLS:C0086626","SCTID:39640004","MEDGEN:43368"],"synonyms":[{"name":"Chisso-Minamata disease","type":"exact"}],"termid":"MONDO:0024251","xrefs":{"Monarch":{"xref_id":"0024251"}}}


id: GO:0097232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a lamellar body. A lamellar body is a membrane-bounded organelle, specialized for the storage and secretion of various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae. Has some similar properties to, but is distinct from, a lysosome.","definition_xrefs":["GOC:sl","PMID:11940594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"lamellar body","termid":"GO:0042599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"lamellar body membrane","termid":"GO:0097232"}


id: GO:0007585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory gaseous exchange by respiratory system","synonyms":[{"name":"breathing","type":"broad"},{"name":"respiration","type":"broad"}],"termid":"GO:0007585"}


id: GO:0072575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the shaping of the liver.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"liver morphogenesis","termid":"GO:0072576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in liver morphogenesis","termid":"GO:0072575"}


id: MONDO:0007874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langer-Giedon syndrome, also known as trichorhinophalangeal syndrome type 2, is a very rare, genetic, multiple congenital anomaly disorder characterized by bone abnormalities, distinctive facial features, multiple exostoses, and intellectual disability.","definition_xrefs":["Orphanet:502"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 8","termid":"MONDO:0016907"},{"relation_name":"is_a","term_name":"trichorhinophalangeal syndrome","termid":"MONDO:0017951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"trichorhinophalangeal syndrome type II","secondary_identifiers":["MedDRA:10050638","NCIT:C75118","DOID:4998","ICD9:759.89","OMIM:150230","UMLS:C0023003","SCTID:41069008","GARD:7801","MESH:D015826","MEDGEN:6009","NORD:1788","icd11.foundation:315453775"],"synonyms":[{"name":"Giedion-Langer syndrome","type":"related"},{"name":"Langer Giedion syndrome","type":"related"},{"name":"Langer-Giedion syndrome","type":"exact"},{"name":"TRPS 2","type":"related"},{"name":"TRPS2","type":"related"},{"name":"chromosome 8Q24.1 deletion syndrome","type":"related"},{"name":"deletion 8q24.1","type":"exact"},{"name":"monosomy 8q24.1","type":"exact"},{"name":"trichorhinophalangeal dysplasia type II","type":"exact"},{"name":"trichorhinophalangeal syndrome type 2","type":"exact"},{"name":"trichorhinophalangeal syndrome, type 2","type":"related"},{"name":"trichorhinophalangeal syndrome, type II","type":"related"}],"termid":"MONDO:0007874","xrefs":{"Monarch":{"xref_id":"0007874"}}}


id: PBO:0073499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGSM3 antisense RNA 1","termid":"PBO:0073499"}


id: PBO:0016070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic mRNA processing body, zf-CCHC type zinc finger protein (predicted)","termid":"PBO:0016070"}


id: PBO:0077983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 5-1","termid":"PBO:0077983"}


id: PBO:0044128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 14, pseudogene","termid":"PBO:0044128"}


id: MONDO:0030010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 25 with anosmia","secondary_identifiers":["GARD:16387","UMLS:C5394246","MEDGEN:1717461","OMIM:618841"],"synonyms":[{"name":"HH25","type":"exact"},{"name":"HYPOGONADOTROPIC HYPOGONADISM 25 WITH ANOSMIA","type":"exact"},{"name":"hypogonadotropic hypogonadism 25 with anosmia","type":"exact"}],"termid":"MONDO:0030010","xrefs":{"Monarch":{"xref_id":"0030010"}}}


id: PBO:0005819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane i-AAA protease complex subunit Yme1 (predicted)","termid":"PBO:0005819"}


id: PBO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytosis regulator (predicted)","termid":"PBO:0002232"}


id: MONDO:0019592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. In gonochoristic organisms, congenital conditions in which development of chromosomal, gonadal, or anatomical sex is atypical. Effects from exposure to abnormal levels of gonadal hormones in the maternal environment, or disruption of the function of those hormones by ENDOCRINE DISRUPTORS are included.","definition_xrefs":["MESH:D012734"],"gene_count":0,"genotype_count":0,"name":"obsolete disorder of sex development (obsolete MONDO:0019592)","termid":"MONDO:0019592","xrefs":{"Monarch":{"xref_id":"0019592"}}}


id: PBO:0012230
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switching","termid":"PBO:0012230"}


id: PBO:0072797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 3","termid":"PBO:0072797"}


id: GO:0045942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phosphorus utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorus utilization","termid":"GO:0006795"},{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"negatively_regulates","term_name":"phosphorus utilization","termid":"GO:0006794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphorus utilization","synonyms":[{"name":"down regulation of phosphorus utilization","type":"exact"},{"name":"down-regulation of phosphorus utilization","type":"exact"},{"name":"downregulation of phosphorus utilization","type":"exact"},{"name":"inhibition of phosphorus utilization","type":"narrow"}],"termid":"GO:0045942"}


id: PBO:0075462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 13","termid":"PBO:0075462"}


id: GO:0010373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of gibberellin biosynthetic process","synonyms":[{"name":"negative regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010373"}


id: PBO:0089762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6- mannanase","termid":"PBO:0089762"}


id: PBO:0041136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 19","termid":"PBO:0041136"}


id: GO:1905249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of memory.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25905804"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of memory (obsolete GO:1905249)","synonyms":[{"name":"inhibition of memory","type":"narrow"},{"name":"suppression of memory","type":"exact"}],"termid":"GO:1905249"}


id: GO:2000243
data:
  {"annotated_genes":["SJAG_02773","SJAG_03453","SJAG_02923","SJAG_01956","SJAG_00210","SJAG_04509","SJAG_00100","SJAG_00990","SJAG_04666","SJAG_05288","SJAG_04771","SJAG_02233","SJAG_03802","SJAG_03309","SJAG_00117","SJAG_02444","SJAG_00472","SJAG_03081","SJAG_00993","SJAG_02472","SJAG_04009","SJAG_02592","SJAG_00526","SJAG_02404","SJAG_01718","SJAG_02066","SJAG_02379","SJAG_04026","SJAG_02266","SJAG_03735","SJAG_01311","SJAG_02380","SJAG_05000","SJAG_00457","SJAG_00975","SJAG_01254","SJAG_00514","SJAG_01345","SJAG_00145","SJAG_03438","SJAG_00600","SJAG_01113","SJAG_01794","SJAG_01084","SJAG_00664","SJAG_06638","SJAG_05153","SJAG_00781","SJAG_02785","SJAG_03623","SJAG_04259","SJAG_04206","SJAG_01699","SJAG_01978","SJAG_03371","SJAG_03048","SJAG_02730","SJAG_03346","SJAG_03067","SJAG_00256","SJAG_02723","SJAG_04853","SJAG_01401","SJAG_04682","SJAG_03340","SJAG_01509","SJAG_04312","SJAG_03486","SJAG_02169","SJAG_03720","SJAG_00266","SJAG_04813","SJAG_03501","SJAG_00364","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[94914,90106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051728"},{"annotations":[98175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[115328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[115884,87789,116224,117969,88971,106034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010514"},{"annotations":[105573,109019,105731,106406,104198,118107,102114],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110045"},{"annotations":[105668,106253,100298,115274,106408,94129,92691,104255,91172,87966,93989,105574,106604,114214,108766,101602,115813],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[93092],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[96136,96802,93093,91951,106037,88993],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[70688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"},{"annotations":[102042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[90491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[117972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075319"},{"annotations":[116226,117973],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:0140648"},{"annotations":[111121,98310,104675,99206,99883,101510,106894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031139"},{"annotations":[73338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[108330,108561,118829,118830,87613,106811,101143,116018,104199,100256,99263,103116],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:1900237"},{"annotations":[115975,102126,106378,88820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[90611,89628,87657,93246,111113],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902917"},{"annotations":[113529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[118831,96803,106812,118832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051446"},{"annotations":[102129,108112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[94917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[88821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[87281,92184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[108798,94303,101377,104677],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110044"},{"annotations":[90616,115331,106137,111114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032005"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of reproductive process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"positively_regulates","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":75,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00117":null,"SJAG_00145":null,"SJAG_00210":null,"SJAG_00256":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00457":null,"SJAG_00472":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00664":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01345":null,"SJAG_01401":null,"SJAG_01509":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_01956":null,"SJAG_01978":null,"SJAG_02066":null,"SJAG_02169":null,"SJAG_02233":null,"SJAG_02266":null,"SJAG_02379":null,"SJAG_02380":null,"SJAG_02404":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03340":null,"SJAG_03346":null,"SJAG_03371":null,"SJAG_03438":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03623":null,"SJAG_03720":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04259":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04682":null,"SJAG_04771":null,"SJAG_04813":null,"SJAG_04853":null,"SJAG_05000":null,"SJAG_05153":null,"SJAG_05288":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of reproductive process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:2000243","terms_by_termid":{"GO:0000750":null,"GO:0010514":null,"GO:0010515":null,"GO:0010845":null,"GO:0010846":null,"GO:0031139":null,"GO:0031141":null,"GO:0031142":null,"GO:0032005":null,"GO:0051446":null,"GO:0051728":null,"GO:0071507":null,"GO:0075296":null,"GO:0075319":null,"GO:0090029":null,"GO:0110032":null,"GO:0110044":null,"GO:0110045":null,"GO:0140648":null,"GO:0140748":null,"GO:1900237":null,"GO:1902917":null,"GO:1903024":null,"GO:1904514":null,"GO:1905191":null,"GO:1905263":null,"GO:1905326":null}}


id: PBO:0051489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 6","termid":"PBO:0051489"}


id: GO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex forming portion of the radial spoke that is orthogonal to the elongated stalk and which projects towards the central pair of microtubules within the ciliary or flagellum axoneme.","definition_xrefs":["GOC:cilia","PMID:34871179","GOC:hjd","GOC:krc","PMID:22754630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"radial spoke head","synonyms":[{"name":"radial spokehead","type":"exact"}],"termid":"GO:0001535"}


id: PBO:0077465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 185A pseudogene 1","termid":"PBO:0077465"}


id: PBO:0071020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 22","termid":"PBO:0071020"}


id: PBO:0084049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein; negatively regulates RAS by converting it from the GTP- to the GDP-bound inactive form, required for reducing cAMP levels under nutrient limiting conditions; IRA2 has a paralog, IRA1, that arose from the whole genome duplication; defects in human homolog NF1 are associated with neurofibromatosis","termid":"PBO:0084049"}


id: MONDO:0010180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spondylocostal dysostosis (ARSD) is a rare condition of variable severity associated with vertebral and rib segmentation defects and characterized by a short neck with limited mobility, winged scapulae, a short trunk, and short stature with multiple vertebral anomalies at all levels of the spine.","definition_xrefs":["Orphanet:2311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondylocostal dysostosis","termid":"MONDO:0000359"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of fucoglycosan synthesis","termid":"MONDO:0017747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005497","MONDO:0024322","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spondylocostal dysostosis","secondary_identifiers":["ICD9:756.9","GARD:6798","MESH:C535781","SCTID:61367005"],"synonyms":[{"name":"Jarcho-Levin syndrome","type":"exact"},{"name":"SCDO1","type":"related"},{"name":"costovertebral dysplasia","type":"related"},{"name":"spondylocostal dysostosis 1, autosomal recessive","type":"related"},{"name":"spondylocostal dysostosis, autosomal recessive","type":"exact"}],"termid":"MONDO:0010180","xrefs":{"Monarch":{"xref_id":"0010180"}}}


id: PBO:0078029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 19 (non-functional)","termid":"PBO:0078029"}


id: PBO:0052610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 1","termid":"PBO:0052610"}


id: MONDO:0013689
data:
  {"annotated_genes":["SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85410],"is_not":false,"summary":null,"term":"MONDO:0013689"}]},"cv_name":"mondo","definition":"Any 46 XX gonadal dysgenesis in which the cause of the disease is a mutation in the PSMC3IP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080495","MEDGEN:482101","UMLS:C3280471","OMIM:614324","GARD:18041"],"synonyms":[{"name":"46 XX gonadal dysgenesis caused by mutation in PSMC3IP","type":"exact"},{"name":"ODG3","type":"related"},{"name":"PSMC3IP 46 XX gonadal dysgenesis","type":"exact"},{"name":"ovarian dysgenesis 3","type":"exact"},{"name":"ovarian dysgenesis type 3","type":"exact"}],"termid":"MONDO:0013689","terms_by_termid":{"MONDO:0013689":null},"xrefs":{"Monarch":{"xref_id":"0013689"}}}


id: GO:0060079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane potential","termid":"GO:0060078"},{"relation_name":"part_of","term_name":"chemical synaptic transmission, postsynaptic","termid":"GO:0099565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"excitatory postsynaptic potential","synonyms":[{"name":"regulation of EPSP","type":"related"},{"name":"regulation of excitatory post-synaptic membrane potential","type":"exact"}],"termid":"GO:0060079"}


id: PBO:0084765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial mRNA maturase with a role in splicing; encoded by both exon and intron sequences of partially processed COB mRNA","termid":"PBO:0084765"}


id: GO:0070686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a macropinocytic cup.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"macropinocytic cup","termid":"GO:0070685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"macropinocytic cup membrane","synonyms":[{"name":"crown membrane","type":"exact"}],"termid":"GO:0070686"}


id: PBO:0042822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 1 pseudogene 2","termid":"PBO:0042822"}


id: MOD:01450
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an N-formyl-L-methionine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N-formyl-L-methionine residue","termid":"MOD:00030"},{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified N-formyl-L-methionine residue","termid":"MOD:01450"}


id: PBO:0048464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucokinase regulator","termid":"PBO:0048464"}


id: PBO:0082022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member B, cell cycle regulator","termid":"PBO:0082022"}


id: PBO:0057940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3665","termid":"PBO:0057940"}


id: MONDO:0024619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process that affects the brain and/or spinal cord. Representative examples include encephalitis, poliomyelitis, arachnoiditis, and meningitis.","definition_xrefs":["NCIT:C27582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system infectious disorder","secondary_identifiers":["UMLS:C4759823","MEDGEN:1684837","MESH:D002494","EFO:1001456","ICD9:349.89","SCTID:128117002"],"synonyms":[{"name":"central nervous system infection","type":"related"},{"name":"central nervous system infectious disease","type":"exact"},{"name":"central nervous system infectious disorder","type":"exact"},{"name":"infections, central nervous system","type":"related"},{"name":"infectious disease of central nervous system","type":"exact"}],"termid":"MONDO:0024619","xrefs":{"Monarch":{"xref_id":"0024619"}}}


id: GO:0015075
data:
  {"annotated_genes":["SJAG_04905","SJAG_00136","SJAG_01493","SJAG_MIT09","SJAG_01541","SJAG_03850","SJAG_02019","SJAG_MIT37","SJAG_04668","SJAG_MIT03","SJAG_03516","SJAG_00438","SJAG_04096","SJAG_01435","SJAG_04258","SJAG_02646","SJAG_00057","SJAG_00915","SJAG_03895","SJAG_MIT04","SJAG_00328","SJAG_00222","SJAG_01973","SJAG_02532","SJAG_04698","SJAG_02958","SJAG_01007","SJAG_02782","SJAG_03866","SJAG_01355","SJAG_02399","SJAG_03337","SJAG_04260","SJAG_04122","SJAG_04167","SJAG_04616","SJAG_01447","SJAG_04830","SJAG_05342","SJAG_04588","SJAG_07007","SJAG_03114","SJAG_05229","SJAG_05294","SJAG_03401","SJAG_03528","SJAG_01168","SJAG_07006","SJAG_00755","SJAG_03925","SJAG_03595","SJAG_04246","SJAG_03490","SJAG_01077","SJAG_01078","SJAG_02780","SJAG_04673","SJAG_04955","SJAG_02877","SJAG_MIT15","SJAG_01490","SJAG_00601","SJAG_04015","SJAG_04111","SJAG_00976","SJAG_04737","SJAG_03608","SJAG_04028","SJAG_04068","SJAG_04152","SJAG_04185","SJAG_02598","SJAG_00516","SJAG_02322","SJAG_03406","SJAG_02023","SJAG_04892","SJAG_01353","SJAG_01803","SJAG_01817","SJAG_02883","SJAG_05629","SJAG_01471","SJAG_01129","SJAG_02473","SJAG_02564","SJAG_03960","SJAG_02968","SJAG_01397","SJAG_01400","SJAG_04867","SJAG_04471","SJAG_02105","SJAG_01406","SJAG_07003","SJAG_04506","SJAG_02779","SJAG_01990","SJAG_01669","SJAG_05204","SJAG_04714","SJAG_MIT13","SJAG_02504","SJAG_01190","SJAG_01639","SJAG_MIT20","SJAG_02578","SJAG_03606","SJAG_00542","SJAG_00985","SJAG_00133","SJAG_01913","SJAG_00212","SJAG_04757","SJAG_01119","SJAG_00211","SJAG_03820","SJAG_02484","SJAG_00048","SJAG_00836","SJAG_01090","SJAG_04675","SJAG_03079"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65242],"is_not":false,"summary":null,"term":"GO:0015075"},{"annotations":[108423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[79789,74952,70767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[75401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015086"},{"annotations":[76995,72168,114182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[109123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015085"},{"annotations":[72816,79608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[70012,78212,90966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[70848,72961,72740,72936,74466,76080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[70175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[61919,62092,57932,101239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005375"},{"annotations":[87960,73681,108038,113970,115201,118822,116561,88984,91716,118794,118772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[103550,69940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015093"},{"annotations":[78853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903425"},{"annotations":[99391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[116954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[92214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061840"},{"annotations":[79738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044750"},{"annotations":[70346,72123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140107"},{"annotations":[100436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[103930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000006"},{"annotations":[113535,112959,65907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005381"},{"annotations":[116715,56918,74258,75294,69983,77109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015095"},{"annotations":[101412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[95527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[75397,73359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005384"},{"annotations":[90967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[103521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[95442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008381"},{"annotations":[73433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008324"},{"annotations":[71896,72717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[112602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[71310,79929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[77501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[107610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[112097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[70377,77644,72983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[73242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[73268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[79869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[77529,94604,79001,72423,75376,118803,107656,93052,57817,118815,107564,93634,69678,77807,101573,69850,118809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[61799,65288,60513,70903,78176,67615,58196,61119,79488,62540,78283,61245,60611,64505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"},{"annotations":[77890,79868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"},{"annotations":[79054,71594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[113669,92112,92170,99392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"},{"annotations":[101415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[75381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[118798,117907,103832,63889,107716,113148,117430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"},{"annotations":[95295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"},{"annotations":[71489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"},{"annotations":[114083,76928,75646,104071,74393,78067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005385"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an ion from one side of a membrane to the other.","definition_xrefs":["GOC:dgf","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":123,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00057":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00211":null,"SJAG_00212":null,"SJAG_00222":null,"SJAG_00328":null,"SJAG_00438":null,"SJAG_00516":null,"SJAG_00542":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01007":null,"SJAG_01077":null,"SJAG_01078":null,"SJAG_01090":null,"SJAG_01119":null,"SJAG_01129":null,"SJAG_01168":null,"SJAG_01190":null,"SJAG_01353":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01406":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01490":null,"SJAG_01493":null,"SJAG_01541":null,"SJAG_01639":null,"SJAG_01669":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_01973":null,"SJAG_01990":null,"SJAG_02019":null,"SJAG_02023":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02399":null,"SJAG_02473":null,"SJAG_02484":null,"SJAG_02504":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02578":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02782":null,"SJAG_02877":null,"SJAG_02883":null,"SJAG_02958":null,"SJAG_02968":null,"SJAG_03079":null,"SJAG_03114":null,"SJAG_03337":null,"SJAG_03401":null,"SJAG_03406":null,"SJAG_03490":null,"SJAG_03516":null,"SJAG_03528":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_03960":null,"SJAG_04015":null,"SJAG_04028":null,"SJAG_04068":null,"SJAG_04096":null,"SJAG_04111":null,"SJAG_04122":null,"SJAG_04152":null,"SJAG_04167":null,"SJAG_04185":null,"SJAG_04246":null,"SJAG_04258":null,"SJAG_04260":null,"SJAG_04471":null,"SJAG_04506":null,"SJAG_04588":null,"SJAG_04616":null,"SJAG_04668":null,"SJAG_04673":null,"SJAG_04675":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04737":null,"SJAG_04757":null,"SJAG_04830":null,"SJAG_04867":null,"SJAG_04892":null,"SJAG_04905":null,"SJAG_04955":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05294":null,"SJAG_05342":null,"SJAG_05629":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"monoatomic ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"ion transmembrane transporter activity","type":"broad"},{"name":"ion transporter activity","type":"exact"}],"termid":"GO:0015075","terms_by_termid":{"GO:0000006":null,"GO:0004129":null,"GO:0005227":null,"GO:0005254":null,"GO:0005262":null,"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0005375":null,"GO:0005381":null,"GO:0005384":null,"GO:0005385":null,"GO:0005388":null,"GO:0008121":null,"GO:0008137":null,"GO:0008308":null,"GO:0008324":null,"GO:0008331":null,"GO:0008381":null,"GO:0008506":null,"GO:0008553":null,"GO:0008554":null,"GO:0008900":null,"GO:0010486":null,"GO:0015075":null,"GO:0015085":null,"GO:0015086":null,"GO:0015093":null,"GO:0015095":null,"GO:0015275":null,"GO:0015295":null,"GO:0015366":null,"GO:0015369":null,"GO:0015379":null,"GO:0015385":null,"GO:0015386":null,"GO:0015410":null,"GO:0015505":null,"GO:0019829":null,"GO:0034216":null,"GO:0043682":null,"GO:0044750":null,"GO:0046933":null,"GO:0046961":null,"GO:0061840":null,"GO:0097434":null,"GO:0140107":null,"GO:0140135":null,"GO:0140581":null,"GO:1903425":null}}


id: PR:O13810
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate 5-kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00832","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate 5-kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.13c","secondary_identifiers":["UniProtKB:O13810"],"synonyms":[{"name":"GK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-proB","type":"exact"},{"name":"gamma-glutamyl kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13810"}


id: SO:0001662
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TATA box core promoter of a gene transcribed by RNA polymerase III.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TATA_box","termid":"SO:0000174"},{"relation_name":"part_of","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_polymerase_III_TATA_box","synonyms":[{"name":"RNA polymerase III TATA box","type":"exact"}],"termid":"SO:0001662"}


id: PBO:0064702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 38","termid":"PBO:0064702"}


id: PBO:0090266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur ATPase involved in ribosome biogenesis and translation Rli1","termid":"PBO:0090266"}


id: PBO:0048810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 4","termid":"PBO:0048810"}


id: PBO:0060683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 3","termid":"PBO:0060683"}


id: GO:0009688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"apocarotenoid biosynthetic process","termid":"GO:0043289"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"abscisic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-695"],"synonyms":[{"name":"abscisic acid anabolism","type":"exact"},{"name":"abscisic acid biosynthesis","type":"exact"},{"name":"abscisic acid formation","type":"exact"},{"name":"abscisic acid synthesis","type":"exact"}],"termid":"GO:0009688"}


id: GO:0045618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of keratinocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epidermal cell differentiation","termid":"GO:0045606"},{"relation_name":"is_a","term_name":"regulation of keratinocyte differentiation","termid":"GO:0045616"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte differentiation","synonyms":[{"name":"activation of keratinocyte differentiation","type":"narrow"},{"name":"stimulation of keratinocyte differentiation","type":"narrow"},{"name":"up regulation of keratinocyte differentiation","type":"exact"},{"name":"up-regulation of keratinocyte differentiation","type":"exact"},{"name":"upregulation of keratinocyte differentiation","type":"exact"}],"termid":"GO:0045618"}


id: GO:0006234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of TTP, ribosylthymine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009209"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"TTP metabolic process","termid":"GO:0046046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"TTP biosynthetic process","synonyms":[{"name":"TTP anabolism","type":"exact"},{"name":"TTP biosynthesis","type":"exact"},{"name":"TTP formation","type":"exact"},{"name":"TTP synthesis","type":"exact"}],"termid":"GO:0006234"}


id: GO:1905666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to endosome.","definition_xrefs":["GOC:PARL","GO_REF:0000058","PMID:22732145","GOC:TermGenie","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to endosome","termid":"GO:0036010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to endosome","synonyms":[{"name":"regulation of protein localisation in endosome","type":"exact"},{"name":"regulation of protein localization in endosome","type":"exact"}],"termid":"GO:1905666"}


id: PBO:0085997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; shows homology with N-terminal end of Bul1p; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; readthrough expression includes YNR068C and the locus for this readthrough is termed BUL3; Bul3p is involved in ubiquitin-mediated sorting of plasma membrane proteins; readthrough and shortened forms of Bul3p interact with Rsp5p differently in vitro","termid":"PBO:0085997"}


id: PBO:0083899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHA domain-containing component of the Mre11 complex; MRE11-RAD50-XRS2 complex is involved in double strand breaks, meiotic recombination, telomere maintenance, and checkpoint signaling;  FHA domain is required for activation of Tel1p","termid":"PBO:0083899"}


id: PBO:0027098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_at_rDNA_replication_origins","termid":"PBO:0027098"}


id: MONDO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth hard tissue disease","secondary_identifiers":["ICD10CM:K03","SCTID:46557008","ICD9:521.8","DOID:214","UMLS:C0155926","ICD9:521.89","MEDGEN:510140"],"synonyms":[{"name":"disorder of hard tissues of teeth","type":"exact"},{"name":"teeth hard tissue disease","type":"related"},{"name":"teeth hard tissue diseases","type":"related"}],"termid":"MONDO:0002220","xrefs":{"Monarch":{"xref_id":"0002220"}}}


id: PBO:0116982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLYWCH1 antisense RNA 1","termid":"PBO:0116982"}


id: PR:Q9UUF3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17A3.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase C17A3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.03c","synonyms":[{"name":"Spom972h-SPBC17A3.03c","type":"exact"}],"termid":"PR:Q9UUF3"}


id: PBO:0048547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor independent 1 transcriptional repressor","termid":"PBO:0048547"}


id: SO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a kind of homology where divergence occurred after a duplication event.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous","termid":"SO:0000857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous","termid":"SO:0000859"}


id: PBO:0051039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy locus","termid":"PBO:0051039"}


id: MONDO:0022151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone fracture","termid":"MONDO:0005315"},{"relation_name":"is_a","term_name":"developmental disability","termid":"MONDO:0005287"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitty Hall Webb syndrome","secondary_identifiers":["SCTID:725103004","UMLS:C2931066","MEDGEN:418975","MESH:C535929"],"synonyms":[{"name":"bowed tibiae, radial anomalies, osteopenia, multiple fractures and developmental delay","type":"related"}],"termid":"MONDO:0022151","xrefs":{"Monarch":{"xref_id":"0022151"}}}


id: PBO:0031879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycine transporter Hem25 (predicted)","termid":"PBO:0031879"}


id: MONDO:0013625
data:
  {"annotated_genes":["SJAG_01039"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87069],"is_not":false,"summary":null,"term":"MONDO:0013625"}]},"cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the VPS35 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late-onset Parkinson disease","termid":"MONDO:0008199"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01039":null},"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3280133","DOID:0060897","MEDGEN:481763","GARD:18478","OMIM:614203"],"synonyms":[{"name":"PARK17","type":"related"},{"name":"Parkinson disease 17","type":"exact"},{"name":"Parkinson disease caused by mutation in VPS35","type":"exact"},{"name":"Parkinson disease type 17","type":"exact"},{"name":"Parkinson's disease 17","type":"related"},{"name":"VPS35 Parkinson disease","type":"exact"},{"name":"autosomal dominant Parkinson disease 17","type":"exact"}],"termid":"MONDO:0013625","terms_by_termid":{"MONDO:0013625":null},"xrefs":{"Monarch":{"xref_id":"0013625"}}}


id: GO:1902261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:11299204","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"},{"relation_name":"is_a","term_name":"positive regulation of voltage-gated potassium channel activity","termid":"GO:1903818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of delayed rectifier potassium channel activity","synonyms":[{"name":"activation of delayed rectifier potassium channel activity","type":"narrow"},{"name":"up regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"upregulation of delayed rectifier potassium channel activity","type":"exact"}],"termid":"GO:1902261"}


id: PR:P30776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A double-strand-break repair protein rad21 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12585:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin subunit rad21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.17c","secondary_identifiers":["UniProtKB:P30776"],"synonyms":[{"name":"SCC1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC338.17c","type":"related"},{"name":"Spom972h-RAD21","type":"exact"},{"name":"double-strand-break repair protein rad21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30776"}


id: GO:0018203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-isoleucine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-isoleucine modification","termid":"GO:0018203"}


id: GO:0098755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which seed dormancy is maintained by the presence of absisic acid.","definition_xrefs":["GOC:dos","PMID:9580097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of seed dormancy","termid":"GO:0010231"},{"relation_name":"part_of","term_name":"response to abscisic acid","termid":"GO:0009737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of seed dormancy by absisic acid","termid":"GO:0098755"}


id: PBO:0045292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 44","termid":"PBO:0045292"}


id: PBO:0085735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in threonylcarbamoyl adenosine biosynthesis; Sua5p and Qri7p are necessary and sufficient for RNA t6A modification in vitro; null mutant lacks N6-threonylcarbamoyl adenosine (t6A) modification in the anticodon loop of ANN-decoding tRNA; member of conserved YrdC/Sua5 family; binds single-stranded telomeric DNA and null mutant has abnormal telomere length","termid":"PBO:0085735"}


id: GO:0006143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete purine metabolic process (obsolete GO:0006143)","synonyms":[{"name":"purine metabolic process","type":"exact"}],"termid":"GO:0006143"}


id: MONDO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival deposit","termid":"MONDO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival concretion","secondary_identifiers":["ICD9:372.54","SCTID:13706005","MEDGEN:509822","UMLS:C0155162","DOID:11988"],"termid":"MONDO:0001412","xrefs":{"Monarch":{"xref_id":"0001412"}}}


id: PBO:0052937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 22-1","termid":"PBO:0052937"}


id: MONDO:0017279
data:
  {"annotated_genes":["SJAG_16459","SJAG_01229","SJAG_00063","SJAG_04545","SJAG_04404","SJAG_04757","SJAG_03866","SJAG_02106"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85566,85567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014796"},{"annotations":[85960,85961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011658"},{"annotations":[85575,85576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014233"},{"annotations":[86706,86707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"}]},"cv_name":"mondo","definition":"A form of Parkinson disease (PD) characterized by an age of onset between 21-45 years, rigidity, painful cramps followed by tremor, bradykinesia, dystonia, gait complaints and falls, and other non-motor symptoms. A slow disease progression and a more pronounced response to dopaminergic therapy are also observed in most YOPD forms.","definition_xrefs":["Orphanet:2828"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary orthostatic hypotension","termid":"MONDO:0015914"},{"relation_name":"is_a","term_name":"Parkinson disease","termid":"MONDO:0005180"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_01229":null,"SJAG_02106":null,"SJAG_03866":null,"SJAG_04404":null,"SJAG_04545":null,"SJAG_04757":null,"SJAG_16459":null},"genotype_count":0,"is_obsolete":false,"name":"young-onset Parkinson disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:907947","GARD:16610","UMLS:C4275179","DOID:0060894","SCTID:715345007"],"synonyms":[{"name":"YOPD","type":"exact"},{"name":"early-onset Parkinson disease","type":"exact"},{"name":"early-onset Parkinson's disease","type":"related"}],"termid":"MONDO:0017279","terms_by_termid":{"MONDO:0011658":null,"MONDO:0011706":null,"MONDO:0014233":null,"MONDO:0014796":null},"xrefs":{"Monarch":{"xref_id":"0017279"}}}


id: PBO:0088013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II nitroreductase, using NADH as reductant; mutants are defective in fatty acid mediated repression of genes involved in fatty acid biosynthesis indicative of a role in lipid signaling; involved in the oxidative stress response; transcription induction by cadmium and selenite indicates a possible role in the metal stress response; expression induced in cells treated with the mycotoxin patulin","termid":"PBO:0088013"}


id: PBO:0059311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51 pseudogene 2","termid":"PBO:0059311"}


id: FYPO:0003105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from transposable element transcripts measured in a cell is greater than normal.","definition_xrefs":["PomBase:mah","PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased repeat element RNA level","termid":"FYPO:0003558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased transposable element-derived small RNA level","synonyms":[{"name":"increased accumulation of transposable element-derived small RNAs","type":"related"},{"name":"increased transposable element-derived small RNA accumulation","type":"related"},{"name":"increased transposable element-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"increased transposable element-derived small RNA level during vegetative growth","type":"exact"},{"name":"increased transposable element-derived small transcript level","type":"exact"},{"name":"increased transposon-derived small RNA level","type":"exact"}],"termid":"FYPO:0003105"}


id: PBO:0060596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit D2","termid":"PBO:0060596"}


id: PBO:0065666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRN2 antisense RNA 1","termid":"PBO:0065666"}


id: PBO:0035965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_cellular_response_to_acetaldehyde","termid":"PBO:0035965"}


id: FYPO:0004087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which astral microtubules are present in a greater than normal proportion of the cells that have mitotic spindles.","definition_xrefs":["PMID:11694582","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased number of cells with astral spindle microtubules","synonyms":[{"name":"increased fraction of cells with spindles with astral microtubules","type":"exact"},{"name":"increased fraction of spindles with astral microtubules","type":"exact"},{"name":"increased number of cells with spindles with astral microtubules","type":"exact"},{"name":"increased number of spindles with astral microtubules","type":"exact"}],"termid":"FYPO:0004087"}


id: SO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological_region characterized as a single heritable trait in a phenotype screen. The heritable phenotype may be mapped to a chromosome but generally has not been characterized to a specific gene locus.","definition_xrefs":["JAX:hdene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic_marker","termid":"SO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heritable_phenotypic_marker","synonyms":[{"name":"heritable phenotypic marker","type":"exact"},{"name":"phenotypic marker","type":"exact"}],"termid":"SO:0001500"}


id: PBO:0046257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 6","termid":"PBO:0046257"}


id: PBO:0083776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear protein; required for biogenesis of the small ribosomal subunit; has a possible role in the osmoregulatory glycerol response; putative homolog of human NOM1 which is implicated in acute myeloid leukemia","termid":"PBO:0083776"}


id: MOD:00348
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carbamoyl-L-alanine.","definition_xrefs":["PubMed:12203680","RESID:AA0343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-aminocarbamoylated residue","termid":"MOD:01679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carbamoyl-L-alanine","synonyms":[{"name":"(S)-2-(carbamoylamino)propanoic acid","type":"exact"},{"name":"2-ureidopropanoic acid","type":"exact"},{"name":"MOD_RES N-carbamoylalanine","type":"exact"},{"name":"N-carbamoyl-L-alanine","type":"exact"},{"name":"N-carbamylalanine","type":"exact"},{"name":"N2CbmAla","type":"exact"}],"termid":"MOD:00348"}


id: GO:0034239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"},{"relation_name":"regulates","term_name":"macrophage fusion","termid":"GO:0034238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage fusion","termid":"GO:0034239"}


id: GO:0015954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine ribonucleotide is synthesized from another pyrimidine ribonucleotide.","definition_xrefs":["ISBN:0471394831","GOC:mah","ISBN:0306444747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide interconversion","termid":"GO:0015953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleotide interconversion","termid":"GO:0015954"}


id: PBO:0017591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine transmembrane transporter Thi9","termid":"PBO:0017591"}


id: PBO:0060372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myozenin 2","termid":"PBO:0060372"}


id: FYPO:0006058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuole fusion, the merging of two vacuole membranes to form a single vacuole, is abnormal during sporulation.","definition_xrefs":["GO:0042144","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole fusion","termid":"FYPO:0006057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal vacuole fusion during sporulation","synonyms":[{"name":"abnormal homotypic vacuole fusion during sporulation","type":"exact"},{"name":"abnormal vacuole fusion, non-autophagic, during sporulation","type":"exact"}],"termid":"FYPO:0006058"}


id: MONDO:0007804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pallister-Hall syndrome (PHS), a pleiotropic autosomal dominant malformative disorder, is characterized by hypothalamic hamartoma, pituitary dysfunction, bifid epiglottis, polydactyly, and, more rarely, renal abnormalities and genitourinary malformations.","definition_xrefs":["Orphanet:672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pallister-Hall syndrome","secondary_identifiers":["ICD9:759.89","icd11.foundation:1845613381","MESH:D054975","MEDGEN:120514","GARD:7305","NORD:1545","OMIM:146510","DOID:9248","NCIT:C84987","SCTID:56677004","UMLS:C0265220"],"synonyms":[{"name":"PHS","type":"exact"},{"name":"Pallister Hall syndrome","type":"exact"},{"name":"Pallister-Hall syndrome","type":"exact"},{"name":"ano-cerebro-digital syndrome","type":"exact"},{"name":"hypothalamic hamartoblastoma syndrome","type":"exact"},{"name":"hypothalamic hamartoblastoma, hypopituitarism, imperforate anus, and postaxial polydactyly","type":"exact"}],"termid":"MONDO:0007804","xrefs":{"Monarch":{"xref_id":"0007804"}}}


id: PBO:0084814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant show severe fragmentation of mitochondria; expression is strongly induced by alpha factor; may have role in maintenance of mitochondrial morphology","termid":"PBO:0084814"}


id: PBO:0091539
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human TPM1 smooth muscle isoform","termid":"PBO:0091539"}


id: PBO:0072701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUVBL1 antisense RNA 1","termid":"PBO:0072701"}


id: GO:0070558
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaM-beta2 integrin complex bound to membrane protein CD63, a member of the tetraspan family.","definition_xrefs":["PMID:8871662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaM-beta2 integrin-CD63 complex","synonyms":[{"name":"ITGAM-ITGB2-CD63 complex","type":"narrow"}],"termid":"GO:0070558"}


id: GO:0042948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of salicin (saligenin-beta-D-glucopyranoside), a glucoside of o-hydroxybenzylalcohol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucoside transport","termid":"GO:0015759"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"salicin transport","termid":"GO:0042948"}


id: PBO:0082136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin-related protein that binds nucleosomes; a component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A","termid":"PBO:0082136"}


id: MONDO:0009519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multifocal, multisystem form of Langerhans-cell histiocytosis. There is involvement of multiple organ systems including the bones, skin, liver, spleen, and lymph nodes. Patients are usually infants presenting with fever, hepatosplenomegaly, lymphadenopathy, bone and skin lesions, and pancytopenia.","definition_xrefs":["NCIT:C3160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis specific to childhood","termid":"MONDO:0017025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"letterer-Siwe disease","secondary_identifiers":["ICDO:9754/3","OMIM:246400","UMLS:C0023381","Orphanet:99870","MedDRA:10024265","icd11.foundation:1827474596","MEDGEN:7311"],"synonyms":[{"name":"L-S disease","type":"related"},{"name":"acute and disseminated Langerhans cell histiocytosis","type":"exact"},{"name":"acute disseminated Langerhans cell histiocytosis","type":"exact"},{"name":"histiocytosis X, acute disseminated","type":"related"},{"name":"letterer-Siwe disease","type":"exact"},{"name":"multifocal multisystem Langerhans cell histiocytosis","type":"exact"}],"termid":"MONDO:0009519","xrefs":{"Monarch":{"xref_id":"0009519"}}}


id: GO:0002280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a monocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["PMID:16551245","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"monocyte activation","termid":"GO:0042117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte activation involved in immune response","synonyms":[{"name":"monocyte activation during immune response","type":"related"}],"termid":"GO:0002280"}


id: GO:0070912
data:
  {"annotated_genes":["SJAG_03454","SJAG_04540"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90626,110900],"is_not":false,"summary":null,"term":"GO:0070912"}]},"cv_name":"cellular_component","definition":"A heterodimeric nucleotide-excision repair complex that is involved in transcription-coupled repair. The subunits are known as Ddb1 and Ckn1 in S. pombe; Ddb1 contains a motif called the DDB-box that interacts with adaptor proteins for DDB1/cullin 4 ubiquitin ligases.","definition_xrefs":["PMID:18794354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03454":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Ddb1-Ckn1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070912","terms_by_termid":{"GO:0070912":null}}


id: PBO:0014307
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GlycosylPhosphatidylInositol","termid":"PBO:0014307"}


id: FYPO:0002347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is abnormal.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal stress granule assembly","termid":"FYPO:0007318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal stress granule assembly during vegetative growth","synonyms":[{"name":"abnormal cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"abnormal stress granule assembly during mitotic cell cycle","type":"related"},{"name":"abnormal stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0002347"}


id: MONDO:1010330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratitis, non-human animal","secondary_identifiers":["OMIA:001287"],"termid":"MONDO:1010330","xrefs":{"Monarch":{"xref_id":"1010330"}}}


id: PBO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acyldihydroxyacetone phosphate reductase (predicted)","termid":"PBO:0002486"}


id: PBO:0047175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 8","termid":"PBO:0047175"}


id: PBO:0081719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 648","termid":"PBO:0081719"}


id: GO:1990900
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A constriction site at the junction of the plasma, flagellar and flagellar pocket membranes where the flagellum emerges from the cell body. Observed in some unicellular eukaryotic species such as Chlamydomonas, Giardia and Trypanosoma.","definition_xrefs":["GOC:giardia","PMID:18462016","PMID:19806154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ciliary pocket","termid":"GO:0020016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary pocket collar","synonyms":[{"name":"FPC","type":"related"},{"name":"cilium pocket collar","type":"exact"},{"name":"flagellar collar","type":"related"},{"name":"flagellar pocket collar","type":"exact"},{"name":"flagellar pore","type":"related"},{"name":"flagellum pocket collar","type":"exact"}],"termid":"GO:1990900"}


id: MONDO:1010539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megacolon that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megacolon, non-human animal","termid":"MONDO:1010039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megacolon, rabbit","secondary_identifiers":["OMIA:000629-9986"],"termid":"MONDO:1010539","xrefs":{"Monarch":{"xref_id":"1010539"}}}


id: PBO:0048179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucosidase","termid":"PBO:0048179"}


id: FYPO:0002605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA during G2 phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation at rDNA during vegetative growth","termid":"FYPO:0002604"},{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitotic G2 phase","termid":"FYPO:0004112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during mitotic G2 phase","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0002605"}


id: MONDO:0019643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient pseudohypoaldosteronism is a renal tubulopathy characterized by renal tubular resistance to aldosterone, characterized by hyponatremia, metabolic acidosis and hyperkalemia and manifesting as dehydration, secondary to urinary tract malformation and infections in infants.","definition_xrefs":["Orphanet:93164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism","termid":"MONDO:0018638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"transient pseudohypoaldosteronism","secondary_identifiers":["icd11.foundation:225064822","SCTID:717263009","UMLS:C4273962","MEDGEN:900190","GARD:19176"],"synonyms":[{"name":"TPHA","type":"exact"}],"termid":"MONDO:0019643","xrefs":{"Monarch":{"xref_id":"0019643"}}}


id: MONDO:0035781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with rectourethral fistula (obsolete MONDO:0035781)","secondary_identifiers":["Orphanet:600961"],"termid":"MONDO:0035781","xrefs":{"Monarch":{"xref_id":"0035781"}}}


id: MONDO:0957875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant 11","secondary_identifiers":["OMIM:620528","MEDGEN:1849676","DOID:0081400","UMLS:C5882697"],"termid":"MONDO:0957875","xrefs":{"Monarch":{"xref_id":"0957875"}}}


id: GO:0098951
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic recycling endosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic recycling endosome membrane (obsolete GO:0098951)","synonyms":[{"name":"intrinsic to postsynaptic recycling endosome membrane","type":"exact"}],"termid":"GO:0098951"}


id: GO:0032916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta3 production","termid":"GO:0032910"},{"relation_name":"is_a","term_name":"positive regulation of transforming growth factor beta production","termid":"GO:0071636"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta3 production","termid":"GO:0032907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta3 production","synonyms":[{"name":"activation of transforming growth factor-beta3 production","type":"narrow"},{"name":"positive regulation of TGF-B3 production","type":"exact"},{"name":"positive regulation of TGFB3 production","type":"exact"},{"name":"positive regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"stimulation of transforming growth factor-beta3 production","type":"narrow"},{"name":"up regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"up-regulation of transforming growth factor-beta3 production","type":"exact"},{"name":"upregulation of transforming growth factor-beta3 production","type":"exact"}],"termid":"GO:0032916"}


id: GO:0000082
data:
  {"annotated_genes":["SJAG_03048","SJAG_05346","SJAG_01000","SJAG_00100","SJAG_00991","SJAG_01210","SJAG_00996","SJAG_03591","SJAG_01187","SJAG_02026","SJAG_04140","SJAG_01401","SJAG_03160","SJAG_01311","SJAG_03699","SJAG_01825","SJAG_00071","SJAG_02404","SJAG_03681","SJAG_00169","SJAG_02810","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73997,78184,108111,111780],"is_not":false,"summary":null,"term":"GO:0000082"},{"annotations":[108643,101374,115645,88703,102110],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031568"},{"annotations":[109420,91071],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031571"},{"annotations":[98634,93097,91923,91503],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000134"},{"annotations":[105732,108938,116813,102125,106413,105577],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900087"},{"annotations":[76521,115082,115647,74635,91509,108649],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle transition by which a cell in G1 commits to S phase. The process begins with the build up of G1 cyclin-dependent kinase (G1 CDK), resulting in the activation of transcription of G1 cyclins. The process ends with the positive feedback of the G1 cyclins on the G1 CDK which commits the cell to S phase, in which DNA replication is initiated.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"},{"relation_name":"is_a","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00100":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01187":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"G1/S transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-69206"],"termid":"GO:0000082","terms_by_termid":{"GO:0000082":null,"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:1900087":null,"GO:2000134":null}}


id: PBO:0044591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 2","termid":"PBO:0044591"}


id: MONDO:0800467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dyskeratosis congenita caused by impaired telomere maintenance resulting in short or very short telomeres. The phenotypic spectrum includes individuals with classic dyskeratosis congenita (DC) as well as those with very short telomeres and an isolated physical finding. Classic DC is characterized by a triad of dysplastic nails, lacy reticular pigmentation of the upper chest and/or neck, and oral leukoplakia, although this may not be present in all individuals. People with DC/TBD are at increased risk for progressive bone marrow failure (BMF), myelodysplastic syndrome or acute myelogenous leukemia, solid tumors (usually squamous cell carcinoma of the head/neck or anogenital cancer), and pulmonary fibrosis. Other findings can include eye abnormalities (epiphora, blepharitis, sparse eyelashes, ectropion, entropion, trichiasis), taurodontism, liver disease, gastrointestinal telangiectasias, and avascular necrosis of the hips or shoulders. Additional findings include cerebellar hypoplasia (Hoyeraal Hreidarsson syndrome) and bilateral exudative retinopathy and intracranial calcifications (Revesz syndrome and Coats plus syndrome). Onset and progression of manifestations of DC/TBD vary: at the mild end of the spectrum are those who have only minimal physical findings with normal bone marrow function, and at the severe end are those who have the diagnostic triad and early-onset BMF.","definition_xrefs":["PMID:20301779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita and related telomere biology disorder","synonyms":[{"name":"dyskeratosis congenita and related telomere biology disorder","type":"exact"}],"termid":"MONDO:0800467","xrefs":{"Monarch":{"xref_id":"0800467"}}}


id: PBO:0051560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 11 receptor subunit alpha","termid":"PBO:0051560"}


id: GO:0032608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-beta due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interferon-beta production","secondary_identifiers":["GO:0035546","GO:0045350"],"synonyms":[{"name":"IFN-beta production","type":"exact"},{"name":"IFNB production","type":"exact"},{"name":"interferon-beta biosynthetic process","type":"narrow"},{"name":"interferon-beta secretion","type":"narrow"}],"termid":"GO:0032608"}


id: PBO:0067139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 187, pseudogene","termid":"PBO:0067139"}


id: GO:0032787
data:
  {"annotated_genes":["SJAG_05200","SJAG_03434","SJAG_00674","SJAG_04570","SJAG_01432","SJAG_02369","SJAG_03373","SJAG_03903","SJAG_03828","SJAG_03679","SJAG_03943","SJAG_02988","SJAG_04107","SJAG_02885","SJAG_03553","SJAG_01935","SJAG_02741","SJAG_01238","SJAG_04007","SJAG_00734","SJAG_02769","SJAG_00947","SJAG_02796","SJAG_00281","SJAG_00099","SJAG_02985","SJAG_00027","SJAG_00902","SJAG_00706","SJAG_00102","SJAG_04495","SJAG_01271","SJAG_02945","SJAG_04334","SJAG_02158","SJAG_03290","SJAG_02009","SJAG_03130","SJAG_01402","SJAG_03804","SJAG_00866","SJAG_01458","SJAG_00464","SJAG_02176","SJAG_02135","SJAG_04726","SJAG_00630","SJAG_05314","SJAG_00305","SJAG_02717","SJAG_04972","SJAG_03293","SJAG_03064","SJAG_04674","SJAG_03310","SJAG_00673","SJAG_00461","SJAG_01396","SJAG_02785","SJAG_03909","SJAG_06622","SJAG_01356","SJAG_04913","SJAG_04404","SJAG_04048","SJAG_01989","SJAG_00605","SJAG_04192","SJAG_02763","SJAG_01310","SJAG_03526","SJAG_03180","SJAG_02006","SJAG_01596","SJAG_03972","SJAG_03471","SJAG_03660","SJAG_01946","SJAG_03313","SJAG_02408","SJAG_02107","SJAG_06621","SJAG_00839","SJAG_02007","SJAG_01139","SJAG_01300","SJAG_02106","SJAG_02960","SJAG_00685","SJAG_03198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008153"},{"annotations":[76589,114085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006083"},{"annotations":[91202,68377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[116791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[76008,79177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[94773,98022,109144,105219,116092,103136,77638,109142,97749,105588,109145,109147,109143,109146,103393,105218,94284,109141,105587,105217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[72966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[107226,108467,91203,63831,69919,94768,77143,101806,67442,76803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[71060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[79444,111070,73445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[77418,91706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[77415,91707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[72143,93284,76562,101395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006631"},{"annotations":[87203,88181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"},{"annotations":[56989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009448"},{"annotations":[88367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[100785,104850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[60313,62389,59075,60858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019249"},{"annotations":[80123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[97619,74803,96923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[71945,104076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[113504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"},{"annotations":[108120,78742,77061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001676"},{"annotations":[60860,74247,72518,102546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[59076,60859,104810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"},{"annotations":[70529],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[75818,72857],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[97442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[72031,77323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[72565,73189,78815,87618,74408,87189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[72855,73062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006090"},{"annotations":[74905],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[69868],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[70057,74948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[73442,91710,72336,77416,103225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-).","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":90,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00099":null,"SJAG_00102":null,"SJAG_00281":null,"SJAG_00305":null,"SJAG_00461":null,"SJAG_00464":null,"SJAG_00605":null,"SJAG_00630":null,"SJAG_00673":null,"SJAG_00674":null,"SJAG_00685":null,"SJAG_00706":null,"SJAG_00734":null,"SJAG_00839":null,"SJAG_00866":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01139":null,"SJAG_01238":null,"SJAG_01271":null,"SJAG_01300":null,"SJAG_01310":null,"SJAG_01356":null,"SJAG_01396":null,"SJAG_01402":null,"SJAG_01432":null,"SJAG_01458":null,"SJAG_01596":null,"SJAG_01935":null,"SJAG_01946":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02007":null,"SJAG_02009":null,"SJAG_02106":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02158":null,"SJAG_02176":null,"SJAG_02369":null,"SJAG_02408":null,"SJAG_02717":null,"SJAG_02741":null,"SJAG_02763":null,"SJAG_02769":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02885":null,"SJAG_02945":null,"SJAG_02960":null,"SJAG_02985":null,"SJAG_02988":null,"SJAG_03064":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03290":null,"SJAG_03293":null,"SJAG_03310":null,"SJAG_03313":null,"SJAG_03373":null,"SJAG_03434":null,"SJAG_03471":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03660":null,"SJAG_03679":null,"SJAG_03804":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03909":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04007":null,"SJAG_04048":null,"SJAG_04107":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04404":null,"SJAG_04495":null,"SJAG_04570":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_04913":null,"SJAG_04972":null,"SJAG_05200":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"monocarboxylic acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"monocarboxylate metabolic process","type":"exact"},{"name":"monocarboxylic acid metabolism","type":"exact"}],"termid":"GO:0032787","terms_by_termid":{"GO:0001561":null,"GO:0001676":null,"GO:0006083":null,"GO:0006086":null,"GO:0006090":null,"GO:0006110":null,"GO:0006631":null,"GO:0006633":null,"GO:0006636":null,"GO:0008153":null,"GO:0009062":null,"GO:0009102":null,"GO:0009107":null,"GO:0009436":null,"GO:0009448":null,"GO:0009450":null,"GO:0010510":null,"GO:0015940":null,"GO:0019243":null,"GO:0019249":null,"GO:0019367":null,"GO:0019427":null,"GO:0030497":null,"GO:0034625":null,"GO:0042758":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061727":null,"GO:1900535":null,"GO:1903457":null,"GO:1990181":null}}


id: PBO:0027426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_double-strand_break_repair_junction_in_presence_of_persistent_double-strand_breaks","termid":"PBO:0027426"}


id: GO:0071578
data:
  {"annotated_genes":["SJAG_02968","SJAG_04185"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103929,112958],"is_not":false,"summary":null,"term":"GO:0071578"}]},"cv_name":"biological_process","definition":"The directed movement of zinc(2+) ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:vw","PMID:18637840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02968":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"zinc ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044749","GO:0006830","GO:0006831","GO:0140160"],"synonyms":[{"name":"high-affinity zinc II ion transmembrane import","type":"narrow"},{"name":"high-affinity zinc II ion transport","type":"narrow"},{"name":"low-affinity zinc II ion transport","type":"narrow"},{"name":"zinc II ion plasma membrane import","type":"exact"},{"name":"zinc II ion transmembrane import","type":"exact"},{"name":"zinc import","type":"exact"},{"name":"zinc ion import into cell","type":"exact"},{"name":"zinc ion transmembrane import","type":"related"},{"name":"zinc uptake","type":"exact"}],"termid":"GO:0071578","terms_by_termid":{"GO:0071578":null}}


id: GO:0061125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of a chlorinated alkylphenone. An alkylphenone is an aromatic polyketide with methyl and chlorine substitutions.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"},{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis to cAMP","termid":"GO:0061123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061125"}


id: MONDO:0015035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type B (LCHb) is a form of lissencephaly with cerebellar hypoplasia characterized by subtle microcephaly, hypotonia and neurological and cognitive development delay. Hippocampal malformation is a characteristic imaging feature of LCHb.","definition_xrefs":["Orphanet:100012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type B","secondary_identifiers":["SCTID:715819005","icd11.foundation:1056934902","UMLS:C4274993","GARD:19732","MEDGEN:906879"],"termid":"MONDO:0015035","xrefs":{"Monarch":{"xref_id":"0015035"}}}


id: PBO:0004727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergothioneine biosynthesis protein (predicted)","termid":"PBO:0004727"}


id: MONDO:0014676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive Emery-Dreifuss muscular dystrophy in which the cause of the disease is a mutation in the LMNA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Emery-Dreifuss muscular dystrophy","termid":"MONDO:0016830"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 3, autosomal recessive","secondary_identifiers":["MESH:C567633","DOID:0070248","GARD:18209","MEDGEN:413212","OMIM:616516","UMLS:C2750035"],"synonyms":[{"name":"EDMD3","type":"related"},{"name":"EMERY-Dreifuss muscular dystrophy 3, autosomal recessive","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 3, autosomal recessive","type":"exact"},{"name":"LMNA autosomal recessive Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"autosomal recessive Emery-Dreifuss muscular dystrophy caused by mutation in LMNA","type":"exact"}],"termid":"MONDO:0014676","xrefs":{"Monarch":{"xref_id":"0014676"}}}


id: PBO:0065089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-activated catalytic subunit beta","termid":"PBO:0065089"}


id: GO:0004808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminomethyl-2-thiouridine34 in tRNA + S-adenosyl-L-methionine = 5-methylaminomethyl-2-thiouridine34 in tRNA + H+ + S-adenosyl-L-homocysteine. This enzyme specifically adds the terminal methyl group of 5-[(methylamino)methyl]-2-thiouridylate.","definition_xrefs":["RHEA:19569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0140098","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity","secondary_identifiers":["GO:0016425","KEGG_REACTION:R00601","EC:2.1.1.61","MetaCyc:RXN0-5144"],"synonyms":[{"name":"tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity","type":"exact"},{"name":"tRNA 5-methylaminomethyl-2-thiouridylate 5'-methyltransferase activity","type":"related"}],"termid":"GO:0004808"}


id: PR:Q9P6Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pct1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6Q6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-capping enzyme subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.04","synonyms":[{"name":"Spom972h-pct1","type":"exact"},{"name":"TPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA 5'-triphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide 5'-triphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6Q6"}


id: PBO:0064897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B'gamma","termid":"PBO:0064897"}


id: MONDO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm that arises from the esophagus. Representative examples include Kaposi sarcoma, leiomyosarcoma, rhabdomyosarcoma, and synovial sarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal cancer","termid":"MONDO:0007576"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"esophagus sarcoma","secondary_identifiers":["DOID:1114","MEDGEN:234233","UMLS:C1333466","NCIT:C5341"],"synonyms":[{"name":"esophageal sarcoma","type":"exact"},{"name":"esophagus sarcoma","type":"exact"},{"name":"sarcoma of esophagus","type":"exact"},{"name":"sarcoma of oesophagus","type":"exact"},{"name":"sarcoma of the esophagus","type":"exact"},{"name":"sarcoma of the oesophagus","type":"exact"},{"name":"sarcoma, esophagus","type":"exact"},{"name":"sarcoma, oesophagus","type":"exact"}],"termid":"MONDO:0001204","xrefs":{"Monarch":{"xref_id":"0001204"}}}


id: GO:0044147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of structure involved in a symbiotic process","synonyms":[{"name":"negative regulation of development of symbiont during interaction with host","type":"related"},{"name":"negative regulation of development of symbiont involved in interaction with host","type":"related"}],"termid":"GO:0044147"}


id: GO:0051214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNAi-mediated post-transcriptional gene silencing pathway induced by RNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL4 is the primary Dicer to detect RNA viruses.","definition_xrefs":["PMID:15165191","PMID:17693253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi-mediated antiviral immune response","termid":"GO:0009616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNAi-mediated antiviral immunity against RNA virus","synonyms":[{"name":"RNA VIGS","type":"exact"},{"name":"RNA virus induced gene silencing","type":"exact"},{"name":"RNA virus-induced PTGS","type":"exact"},{"name":"RNA virus-induced gene silencing","type":"exact"}],"termid":"GO:0051214"}


id: PBO:0056225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E1","termid":"PBO:0056225"}


id: PBO:0000587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Gos1 (predicted)","termid":"PBO:0000587"}


id: PBO:0082056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease","termid":"PBO:0082056"}


id: PBO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine like 1","termid":"PBO:0044510"}


id: PBO:0028665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_processing","termid":"PBO:0028665"}


id: PBO:0077263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 11, pseudogene","termid":"PBO:0077263"}


id: PBO:0091363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, stationary phase specific","termid":"PBO:0091363"}


id: PATO:0000926
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000926 intercross fertility (obsolete PATO:0000926)","termid":"PATO:0000926"}


id: PBO:0066642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB7A interacting MON1-CCZ1 complex subunit 1","termid":"PBO:0066642"}


id: PBO:0031158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tyrosine_import","termid":"PBO:0031158"}


id: PBO:0060229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYADM antisense RNA 1","termid":"PBO:0060229"}


id: PBO:0111736
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_gene","termid":"PBO:0111736"}


id: PBO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar carboxypeptidase","termid":"PBO:0090228"}


id: GO:0042934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of achromobactin, a citrate siderophore, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"achromobactin transmembrane transporter activity","synonyms":[{"name":"achromobactin transporter activity","type":"related"}],"termid":"GO:0042934"}


id: PBO:0039570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 65","termid":"PBO:0039570"}


id: GO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with macrophage colony-stimulating factor (M-CSF) receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0038023","GO:0016740","GO:0016301","GO:0004672"],"is_obsolete":false,"name":"macrophage colony-stimulating factor receptor activity","synonyms":[{"name":"CSF-1","type":"narrow"},{"name":"Fms","type":"narrow"},{"name":"M-CSF receptor activity","type":"exact"},{"name":"macrophage colony stimulating factor receptor activity","type":"exact"}],"termid":"GO:0005011"}


id: MONDO:0004671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the penis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous carcinoma in situ","termid":"MONDO:0004693"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"penis carcinoma in situ","secondary_identifiers":["NCIT:C27790","UMLS:C0154089","ICD9:233.5","ICDO:8080/2","MEDGEN:102309","SCTID:398768004","DOID:8872","SCTID:398831006"],"synonyms":[{"name":"Bowen disease of the penis","type":"exact"},{"name":"Bowen's disease of penis","type":"exact"},{"name":"Bowen's disease of the penis","type":"exact"},{"name":"Queyrat erythroplasia","type":"exact"},{"name":"Queyrat's erythroplasia","type":"exact"},{"name":"carcinoma in situ of penis","type":"exact"},{"name":"carcinoma in situ of the penis","type":"exact"},{"name":"erythroplasia of Queyrat","type":"exact"},{"name":"grade III penile intraepithelial neoplasia","type":"exact"},{"name":"grade III squamous intraepithelial lesion of penis","type":"exact"},{"name":"grade III squamous intraepithelial lesion of the penis","type":"exact"},{"name":"penile carcinoma in situ","type":"exact"},{"name":"penile carcinoma in situ aJCC v7","type":"exact"},{"name":"penile intraepithelial neoplasia grade III","type":"exact"},{"name":"penis in situ carcinoma","type":"exact"},{"name":"stage 0 penile carcinoma in situ","type":"exact"},{"name":"stage 0 penis carcinoma","type":"exact"}],"termid":"MONDO:0004671","xrefs":{"Monarch":{"xref_id":"0004671"}}}


id: PBO:0039112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of HSP90 ATPase activity 1","termid":"PBO:0039112"}


id: PBO:0039358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenin Y-linked","termid":"PBO:0039358"}


id: PBO:0071871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 9","termid":"PBO:0071871"}


id: GO:0047549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-nitrophenol + 2 H+ + 2 NADPH + O2 = catechol + H2O + 2 NADP+ + nitrite.","definition_xrefs":["RHEA:19457","EC:1.14.13.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-nitrophenol 2-monooxygenase activity","secondary_identifiers":["MetaCyc:2-NITROPHENOL-2-MONOOXYGENASE-RXN","KEGG_REACTION:R00828","UM-BBD_reactionID:r1494"],"synonyms":[{"name":"2-nitrophenol oxygenase activity","type":"related"},{"name":"2-nitrophenol,NADPH:oxygen 2-oxidoreductase (2-hydroxylating, nitrite-forming)","type":"related"},{"name":"nitrophenol oxygenase activity","type":"broad"}],"termid":"GO:0047549"}


id: PATO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which occurs during the light cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light phase","termid":"PATO:0000503"}


id: PBO:0111495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EJC auxiliary factor, pinin ortholog Pnn1","termid":"PBO:0111495"}


id: MONDO:0012960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the SYNGAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005027"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 5","secondary_identifiers":["MEDGEN:382611","OMIM:612621","DOID:0070035","GARD:12558","Orphanet:544254","MESH:C567234","UMLS:C2675473"],"synonyms":[{"name":"MRD5","type":"exact"},{"name":"SYNGAP1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"SYNGAP1 gene mutation linked to intellectual disability, schizophrenia and autism","type":"related"},{"name":"SYNGAP1 syndrome","type":"related"},{"name":"SYNGAP1-related NSID","type":"related"},{"name":"SYNGAP1-related developmental and epileptic encephalopathy","type":"exact"},{"name":"SYNGAP1-related non-syndromic intellectual disability","type":"related"},{"name":"autosomal dominant intellectual disability 5","type":"exact"},{"name":"autosomal dominant mental retardation 5","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 5","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in SYNGAP1","type":"exact"},{"name":"intellectual disability, autosomal dominant 5","type":"exact"},{"name":"intellectual disability, autosomal dominant type 5","type":"exact"},{"name":"mental retardation, autosomal dominant 5","type":"related"},{"name":"mental retardation, autosomal dominant type 5","type":"exact"}],"termid":"MONDO:0012960","xrefs":{"Monarch":{"xref_id":"0012960"}}}


id: PBO:0065978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPA1 related single stranded DNA binding protein, X-linked","termid":"PBO:0065978"}


id: PBO:0049417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2G, pseudogene","termid":"PBO:0049417"}


id: PBO:0078229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-4","termid":"PBO:0078229"}


id: MONDO:0034989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic multiple congenital anomalies/dysmorphic syndrome characterized by intrauterine and postnatal growth restriction, global developmental delay, intellectual disability, and dysmorphic facial features (such as broad nasal root, anteverted nares, long philtrum, low-set and posteriorly rotated ears, and short neck). Additional reported manifestations are microcephaly, short stature, vertebral abnormalities, joint laxity, ocular, cardiac, and renal defects, and minor limb anomalies. Brain imaging may show hypoplastic corpus callosum, delayed myelination, and cerebral atrophy.","definition_xrefs":["Orphanet:508498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-cardiac anomalies-short stature-joint laxity syndrome","secondary_identifiers":["MEDGEN:1799995","UMLS:C5568572","GARD:17948"],"termid":"MONDO:0034989","xrefs":{"Monarch":{"xref_id":"0034989"}}}


id: PR:P08096
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- top2 gene.","definition_xrefs":["UniProtKB:P08096","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.03c","synonyms":[{"name":"DNA topoisomerase II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-top2","type":"exact"}],"termid":"PR:P08096"}


id: MONDO:0015180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete intestinal disease due to fat malabsorption (obsolete MONDO:0015180)","secondary_identifiers":["Orphanet:104005"],"termid":"MONDO:0015180","xrefs":{"Monarch":{"xref_id":"0015180"}}}


id: PBO:0075644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty RTK signaling antagonist 3","termid":"PBO:0075644"}


id: PBO:0074698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70H","termid":"PBO:0074698"}


id: PBO:0044615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 17","termid":"PBO:0044615"}


id: PBO:0044323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 3","termid":"PBO:0044323"}


id: GO:0043917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-ribose 1,5-bisphosphate = D-ribulose 1,5-bisphosphate.","definition_xrefs":["RHEA:32243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribose 1,5-bisphosphate isomerase activity","secondary_identifiers":["EC:5.3.1.29","MetaCyc:RXN-8801"],"synonyms":[{"name":"ribose-1,5-bisphosphate isomerase activity","type":"exact"}],"termid":"GO:0043917"}


id: PBO:0083522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF PEX14/YGL153W","termid":"PBO:0083522"}


id: PR:O42935
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3201 gene.","definition_xrefs":["UniProtKB:O42935","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.11","synonyms":[{"name":"Spom972h-rpl3201","type":"exact"}],"termid":"PR:O42935"}


id: MONDO:0043472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by abnormal secretion of adrenocorticotrophic hormone in conjunction with neoplastic growth occurring anywhere in the body. The most common associations are tumors of the bronchus (oat cell or carcinoid), thymic tumors (epithelial or carcinoid), and pancreatic endocrine tumor. (DeVita et al. Cancer, p 1364. 4th edition. Lippincott)","definition_xrefs":["NCIT:C4387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopic ACTH secretion syndrome","secondary_identifiers":["SCTID:626004","MEDGEN:103","MESH:D000182","NANDO:2200351","UMLS:C0001231"],"synonyms":[{"name":"ACTH syndromes, ectopic","type":"related"},{"name":"ectopic ACTH secretion","type":"exact"},{"name":"ectopic ACTH secretion causing Cushing's syndrome","type":"related"},{"name":"ectopic ACTH secretion syndrome","type":"exact"},{"name":"ectopic ACTH syndrome","type":"exact"},{"name":"ectopic ACTH syndromes","type":"related"},{"name":"hypercortisolism due to nonpituitary tumor","type":"exact"},{"name":"hypercortisolism due to nonpituitary tumour","type":"exact"},{"name":"syndrome, ectopic ACTH","type":"related"},{"name":"syndromes, ectopic ACTH","type":"related"}],"termid":"MONDO:0043472","xrefs":{"Monarch":{"xref_id":"0043472"}}}


id: GO:0010072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the meristem which will give rise to all post-embryonic above-ground structures of the plant as well as the non-root below-ground structures, such as rhizomes and tubers.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"embryonic meristem initiation","termid":"GO:0090421"},{"relation_name":"part_of","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"part_of","term_name":"embryonic meristem development","termid":"GO:0048508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary shoot apical meristem specification","synonyms":[{"name":"embryo shoot apical meristem specification","type":"exact"}],"termid":"GO:0010072"}


id: GO:0009376
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses ATP-dependent protease activity; consists of an ATPase large subunit with homology to other ClpX family ATPases and a peptidase small subunit related to the proteasomal beta-subunits of eukaryotes. In the E. coli complex, a double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer.","definition_xrefs":["UniProt:P0A6H5","PMID:12670962","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic proteasome complex","termid":"GO:0031597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"HslUV protease complex","synonyms":[{"name":"ClpYQ protease complex","type":"exact"}],"termid":"GO:0009376"}


id: GO:1901420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to alcohol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"negatively_regulates","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to alcohol","synonyms":[{"name":"down regulation of response to alcohol","type":"exact"},{"name":"down-regulation of response to alcohol","type":"exact"},{"name":"downregulation of response to alcohol","type":"exact"},{"name":"inhibition of response to alcohol","type":"narrow"}],"termid":"GO:1901420"}


id: PBO:0044274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 14","termid":"PBO:0044274"}


id: GO:0006672
data:
  {"annotated_genes":["SJAG_02842","SJAG_01219","SJAG_02085","SJAG_04178","SJAG_04550","SJAG_02305","SJAG_01057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72872],"is_not":false,"summary":null,"term":"GO:0006672"},{"annotations":[73959,76657,77781,78690,78850,108573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramides, any N-acylated sphingoid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01057":null,"SJAG_01219":null,"SJAG_02085":null,"SJAG_02305":null,"SJAG_02842":null,"SJAG_04178":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ceramide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ceramide metabolism","type":"exact"}],"termid":"GO:0006672","terms_by_termid":{"GO:0006672":null,"GO:0046513":null}}


id: PBO:0052180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 12","termid":"PBO:0052180"}


id: FYPO:0000008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is abnormal. Meiotic recombination is a cellular process in which double strand breaks are formed and repaired through a double Holliday junction intermediate, resulting in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes.","definition_xrefs":["GO:0007131","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abnormal meiotic recombination","synonyms":[{"name":"DNA recombination defects, meiotic","type":"exact"},{"name":"abnormal meiotic DNA recombination","type":"exact"},{"name":"abnormal reciprocal meiotic recombination","type":"exact"},{"name":"meiotic recombination: abnormal","type":"related"}],"termid":"FYPO:0000008"}


id: PBO:0014743
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"changed_by","termid":"PBO:0014743"}


id: GO:0120168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a hot stimulus is received and converted into a molecular signal as part of thermoception.","definition_xrefs":["PMID:21335241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in thermoception","termid":"GO:0050960"},{"relation_name":"part_of","term_name":"sensory perception of hot stimulus","termid":"GO:0062036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hot stimulus involved in thermoception","synonyms":[{"name":"sensory detection of heat stimulus during thermoception","type":"exact"},{"name":"sensory detection of hot stimulus during thermoception","type":"exact"},{"name":"sensory transduction of heat stimulus during thermoception","type":"exact"},{"name":"sensory transduction of hot stimulus during thermoception","type":"exact"},{"name":"thermoception, sensory detection of heat stimulus","type":"exact"},{"name":"thermoception, sensory detection of hot stimulus","type":"exact"},{"name":"thermoception, sensory transduction of heat stimulus","type":"exact"},{"name":"thermoception, sensory transduction of hot stimulus","type":"exact"}],"termid":"GO:0120168"}


id: PBO:0081840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 775","termid":"PBO:0081840"}


id: MONDO:0015446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Middle aortic coarctation is a rare vascular anomaly characterized by the segmental narrowing of the abdominal and/or distal descending thoracic aorta with varying involvement of the visceral and renal arteries that commonly presents in children and young adults with early onset and refractory hypertension, abdominal angina, lower-limb claudication and that can lead to life-threatening complications associated with severe hypertension (i.e. myocardial infarction, heart failure, aortic rupture, renal insufficiency and intracranial hemorrhage). It may be due to various congenital or acquired causes, but it is most often secondary to an acquired inflammatory disease (i.e. Takayasu arteritis or giant cell arteritis).","definition_xrefs":["Orphanet:1456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta coarctation","termid":"MONDO:0007345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical coarctation of aorta","secondary_identifiers":["UMLS:C3496579","GARD:18723","NANDO:2200284","SCTID:471268000","MEDGEN:758831"],"synonyms":[{"name":"Midaortic syndrome","type":"exact"},{"name":"coarctation of the abdominal aorta","type":"exact"},{"name":"mid-aortic dysplastic syndrome","type":"exact"},{"name":"mid-aortic syndrome","type":"exact"},{"name":"middle aortic syndrome","type":"exact"}],"termid":"MONDO:0015446","xrefs":{"Monarch":{"xref_id":"0015446"}}}


id: PBO:0071304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 27","termid":"PBO:0071304"}


id: PR:Q09916
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01748","PRO:DNx","PANTHER:PTHR24031:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase has1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.02c","secondary_identifiers":["UniProtKB:Q09916"],"synonyms":[{"name":"Spom972h-DDX18","type":"exact"}],"termid":"PR:Q09916"}


id: MONDO:0044876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete drug hypersensitivity syndrome (obsolete MONDO:0044876)","termid":"MONDO:0044876","xrefs":{"Monarch":{"xref_id":"0044876"}}}


id: PBO:0005454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb2 (predicted)","termid":"PBO:0005454"}


id: GO:0015913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of short-chain fatty acids into a cell or organelle. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid transport","termid":"GO:0015912"},{"relation_name":"is_a","term_name":"fatty acid transmembrane transport","termid":"GO:1902001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"short-chain fatty acid transmembrane transport","synonyms":[{"name":"short-chain fatty acid import","type":"related"},{"name":"short-chain fatty acid uptake","type":"exact"}],"termid":"GO:0015913"}


id: PBO:0064730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 66","termid":"PBO:0064730"}


id: PBO:0052455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 6","termid":"PBO:0052455"}


id: PBO:0031764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_during_vegetative_growth","termid":"PBO:0031764"}


id: PR:O13819
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ymr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide 3-phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.03","synonyms":[{"name":"Spom972h-ymr1","type":"exact"}],"termid":"PR:O13819"}


id: PBO:0076890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 44","termid":"PBO:0076890"}


id: PBO:0030275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_targeting_to_vacuole","termid":"PBO:0030275"}


id: GO:0031496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating type switching.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating type switching","termid":"GO:0031494"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mating type switching","synonyms":[{"name":"activation of mating type switching","type":"narrow"},{"name":"stimulation of mating type switching","type":"narrow"},{"name":"up regulation of mating type switching","type":"exact"},{"name":"up-regulation of mating type switching","type":"exact"},{"name":"upregulation of mating type switching","type":"exact"}],"termid":"GO:0031496"}


id: PBO:0031238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_osmotic_stress","termid":"PBO:0031238"}


id: PBO:0116467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multispanning membrane protein, CTNS/PQ domain protein, implicated in transmembrane transport","termid":"PBO:0116467"}


id: MONDO:0100002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign inflammatory colitis caused by a non-IgE-mediated immune reaction to ingested food proteins.","definition_xrefs":["PMID:17584315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal allergy","termid":"MONDO:0000777"},{"relation_name":"is_a","term_name":"proctocolitis","termid":"MONDO:0024278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"food protein-induced allergic proctocolitis","secondary_identifiers":["UMLS:C4750318","MEDGEN:1663071"],"synonyms":[{"name":"FPIPC","type":"exact"},{"name":"allergic proctocolitis","type":"broad"},{"name":"milk protein proctocololitis","type":"narrow"}],"termid":"MONDO:0100002","xrefs":{"Monarch":{"xref_id":"0100002"}}}


id: GO:0021755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature eurydendroid cell. Differentiation includes the processes involved in commitment of a neuroblast to a eurydendroid cell fate. A eurydendroid cell is an efferent neuron found in the cerebellar cortex of teleosts.","definition_xrefs":["GOC:jid","PMID:15892096","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eurydendroid cell differentiation","termid":"GO:0021755"}


id: FYPO:0003450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus","synonyms":[{"name":"abolished protein localisation to nucleus","type":"exact"},{"name":"nuclear exclusion","type":"related"},{"name":"nuclear protein exclusion","type":"related"},{"name":"protein localization to nucleus abolished","type":"exact"}],"termid":"FYPO:0003450"}


id: GO:0043962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont adenylate cyclase-mediated signal transduction (obsolete GO:0043962)","termid":"GO:0043962"}


id: PBO:0056142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper tumor suppressor family member 3","termid":"PBO:0056142"}


id: PBO:0109406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_ontology_root_term","termid":"PBO:0109406"}


id: PBO:0111527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 7","termid":"PBO:0111527"}


id: MONDO:0008920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine deficiency, myopathic","secondary_identifiers":["MESH:C536100","OMIM:212160","MEDGEN:347852","UMLS:C1859318"],"synonyms":[{"name":"carnitine deficiency, myopathic","type":"exact"},{"name":"myopathic carnitine deficiency","type":"related"}],"termid":"MONDO:0008920","xrefs":{"Monarch":{"xref_id":"0008920"}}}


id: MONDO:0012163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe combined immunodeficiency characterized by being T cell-negative, B cell-positive and natural killer cell-positive and that has material basis in homozygous or compound heterozygous mutation in the IL7R gene on chromosome 5p13 or the CD45 gene on chromosome 1q31.","definition_xrefs":["DOID:0090014","PMID:9843216","PMID:9068311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"},{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 104","secondary_identifiers":["MESH:C563822","MEDGEN:1801019","GARD:18293","UMLS:C5676890","OMIM:608971"],"synonyms":[{"name":"IMD104","type":"exact"},{"name":"SCID, autosomal recessive, T cell-negative, B cell-positive, NK cell-positive","type":"related"},{"name":"autosomal recessive T cell-negative, B-cell negative, NK cell-positive SCID","type":"exact"},{"name":"autosomal recessive T cell-negative, B-cell positive, NK cell-positive SCID","type":"exact"},{"name":"severe combined immunodeficiency, T cell-negative, B-cell/natural killer-cell positive","type":"exact"},{"name":"severe combined immunodeficiency, T-cell negative, B-cell/natural killer cell-positive type","type":"exact"},{"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-positive, NK cell-positive","type":"exact"}],"termid":"MONDO:0012163","xrefs":{"Monarch":{"xref_id":"0012163"}}}


id: MONDO:0007705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Heinz body anemia","secondary_identifiers":["MESH:C563030","Orphanet:178330","UMLS:C0700299","MEDGEN:148583","DOID:0111363","HP:0005511","OMIM:140700","MedDRA:10002058"],"synonyms":[{"name":"Heinz body anemias","type":"related"},{"name":"Heinz body anemias, alpha-","type":"exact"}],"termid":"MONDO:0007705","xrefs":{"Monarch":{"xref_id":"0007705"}}}


id: PBO:0070269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 3","termid":"PBO:0070269"}


id: PBO:0061836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor","termid":"PBO:0061836"}


id: PBO:0083933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in regulation of the cell cycle; activates Cdc28p kinase to promote the G1 to S phase transition; late G1 specific expression depends on transcription factor complexes, MBF (Swi6p-Mbp1p) and SBF (Swi6p-Swi4p); CLN1 has a paralog, CLN2, that arose from the whole genome duplication; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083933"}


id: MONDO:0007194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, aortic malformation defined as a presence of abnormal two-leaflet aortic valve in at least 2 first-degree relatives. It is frequently asymptomatic or may be associated with progressive aortic valve disease (aortic regurgitation and/or aortic stenosis, typically due to valve calcification) and a concomitant aortopathy (i.e. aortic dilation, aortic aneurysm and/or dissection).","definition_xrefs":["Orphanet:402075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic valve disorder","termid":"MONDO:0003803"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial bicuspid aortic valve","secondary_identifiers":["DOID:0080332","MEDGEN:1670287","OMIMPS:109730","UMLS:C4749284","GARD:17670"],"synonyms":[{"name":"AOVD1","type":"narrow"},{"name":"aortic valve disease 1","type":"narrow"},{"name":"aortic valve disease type 1","type":"narrow"},{"name":"familial BAV","type":"exact"}],"termid":"MONDO:0007194","xrefs":{"Monarch":{"xref_id":"0007194"}}}


id: MONDO:0043346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive transformation of germinal centers is a condition in which a lymph node becomes very enlarged (lymphadenopathy). Typically, only one lymph node is affected, though PTGC can involve multiple lymph nodes. Theneck is the most common location of affected lymph nodes, but PTGC may also affect lymph nodes in the groin and armpits. adults are more frequently affected than children, but children have a higher chance of developing PTGC multiple times (recurrence). PTGC is not considered a precancerous condition, though it has been associated with Hodgkin lymphoma.","definition_xrefs":["GARD:0010712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"progressive transformation of germinal centers","secondary_identifiers":["GARD:10712","MESH:C548085","UMLS:C1514481","NCIT:C38408","MEDGEN:271018"],"synonyms":[{"name":"PTGC","type":"related"},{"name":"progressive transformation of Germinal centers","type":"exact"},{"name":"progressive transformation of Germinal centres","type":"exact"}],"termid":"MONDO:0043346","xrefs":{"Monarch":{"xref_id":"0043346"}}}


id: PBO:0038533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 8","termid":"PBO:0038533"}


id: PBO:0078701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 3-1","termid":"PBO:0078701"}


id: MONDO:0044219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. The Duffy blood group system, which consists of 4 alleles, 5 phenotypes, and 5 antigens, is important in clinical medicine because of transfusion incompatibilities and hemolytic disease of the newborn. Duffy antigens are located on ACKR1 (OMIM:613665), or DARC, an acidic glycoprotein found on erythrocytes and other cells throughout the body. The 2 principal antigens, Fy(a) and Fy(b), are produced by the FYA and FYB codominant alleles (see {613665.0001}). Four phenotypes are defined by the corresponding antibodies, anti-Fy(a) and anti-Fy(b): Fy(a+b-), Fy(a-b+), Fy(a+b+), and Fy(a-b-). Fy(a-b-), or Duffy null, is the major phenotype in African and American blacks and is characterized by the presence of Fy(b) on nonerythroid cells, but an absence of Fy(b) on erythrocytes. The Fy(a-b-) phenotype is associated with complete resistance to infection by the malarial parasite Plasmodium vivax (see OMIM:611162). Individuals with the Fy(a-b-) phenotype have the FYB-erythroid silent (FYB-ES) allele with a mutation in the DARC promoter ({613665.0002}). A fifth phenotype, Fy(bwk), or Fy(x), is characterized by weak Fy(b) expression on erythrocytes due to a reduced amount of protein. Individuals with the Fy(bwk) phenotype have the FYB-weak (FYB-WK) allele, also called the FYX allele, with a missense mutation in DARC ({613665.0003}). Other Duffy antigens include Fy3, Fy4, Fy5, and Fy6 (reviews by {21:Pogo and Chaudhuri (2000)}, {10:Langhi and Bordin (2006)}, and {14:Meny (2010)}).","definition_xrefs":["OMIM:110700"],"gene_count":0,"genotype_count":0,"name":"obsolete blood group, duffy system (obsolete MONDO:0044219)","synonyms":[{"name":"Duffy blood Group system","type":"related"},{"name":"FY","type":"related"},{"name":"Plasmodium vivax, resistance to","type":"related"},{"name":"blood group, DUFFY system","type":"related"},{"name":"blood group, Duffy system","type":"exact"}],"termid":"MONDO:0044219","xrefs":{"Monarch":{"xref_id":"0044219"}}}


id: GO:0010626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:sl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"is_a","term_name":"negative regulation of glial cell proliferation","termid":"GO:0060253"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"}


id: GO:0043050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The contraction and relaxation movements of the pharyngeal muscle that mediate feeding in nematodes.","definition_xrefs":["GOC:cab1","PMID:2181052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating behavior","termid":"GO:0042755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharyngeal pumping","synonyms":[{"name":"pumping behavior","type":"related"}],"termid":"GO:0043050"}


id: PR:P78970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ceramide synthase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase lag1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.09c","secondary_identifiers":["UniProtKB:P78970"],"synonyms":[{"name":"Spom972h-CERS1","type":"exact"},{"name":"longevity assurance factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"longevity assurance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78970"}


id: FYPO:0005222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of histone H3 to chromatin at one or more protein-coding genes is decreased.","definition_xrefs":["PomBase:mah","PMID:23028377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3 localization to chromatin at protein coding gene","synonyms":[{"name":"decreased histone H3 localisation to chromatin at protein coding gene","type":"exact"},{"name":"decreased histone H3 localization to chromatin at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3 localization to chromatin at protein-coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3 localization to chromatin at protein coding gene","type":"exact"}],"termid":"FYPO:0005222"}


id: FYPO:0004018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from NADH to ubiquinone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular respiration","termid":"FYPO:0000566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"normal NADH cytochrome c oxidoreductase","type":"related"},{"name":"normal NADH dehydrogenase (quinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"},{"name":"normal mitochondrial electron transport, NADH to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial electron transport, NADH to ubiquinone, during vegetative growth","type":"exact"}],"termid":"FYPO:0004018"}


id: PBO:0046579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 21, envelope","termid":"PBO:0046579"}


id: PBO:0113356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for spore wall formation; subunit of leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms ring-like structure at leading edge of prospore membrane during meiosis II; mediates assembly of LEP complex, formation of ring-like structure via interaction with spindle pole body components, and prospore membrane maturation; also detected in peroxisomes; potentially phosphorylated by Cdc28p; ADY3 has a paralog, CNM67, that arose from the whole genome duplication","termid":"PBO:0113356"}


id: PBO:0079084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 1-1","termid":"PBO:0079084"}


id: GO:0052759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trinitrophenol hydride Meisenheimer complex + H- = trinitrophenol dihydride Meisenheimer complex (aci form). Coenzyme F420 supplies the hydride (H-) in the reaction.","definition_xrefs":["GOC:mengo_curators","UM-BBD_reactionID:r1066"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme F420-dependent 2,4,6-trinitrophenol hydride reductase activity (obsolete GO:0052759)","synonyms":[{"name":"coenzyme F420-dependent 2,4,6-trinitrophenol-hydride-Meisenheimer-complex hydride transferase activity","type":"exact"}],"termid":"GO:0052759"}


id: FYPO:0003433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ornithine carbamoyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0005447","FYPO:0000652","FYPO:0000707","FYPO:0000002"],"is_obsolete":false,"name":"abnormal ornithine carbamoyltransferase activity","termid":"FYPO:0003433"}


id: PBO:0069745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1026, pseudogene","termid":"PBO:0069745"}


id: FYPO:0005893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein found associated with chromatin is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level in chromatin","synonyms":[{"name":"increased protein level at chromatin during vegetative growth","type":"exact"},{"name":"increased protein level in chromatin during mitotic cell cycle","type":"related"},{"name":"increased protein level in chromatin during vegetative growth","type":"exact"},{"name":"protein accumulation in chromatin","type":"exact"}],"termid":"FYPO:0005893"}


id: PBO:0054638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2043","termid":"PBO:0054638"}


id: SO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double-stranded DNA used to control macromolecular structure and function.","direct_ancestors":[{"relation_name":"is_a","term_name":"ds_oligo","termid":"SO:0000442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_constraint_sequence","synonyms":[{"name":"DNA constraint","type":"exact"},{"name":"DNA constraint sequence","type":"exact"}],"termid":"SO:0001009"}


id: PBO:0083210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF RPL33A/YPL143W, a component of the large (60S) ribosomal subunit","termid":"PBO:0083210"}


id: GO:1901400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta3 activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta3 activation (obsolete GO:1901400)","synonyms":[{"name":"activation of TGF-beta 3 activation","type":"exact"},{"name":"activation of TGFB3 activation","type":"exact"},{"name":"activation of TGFbeta 3 activation","type":"exact"},{"name":"activation of transforming growth factor beta3 activation","type":"narrow"},{"name":"positive regulation of TGF-beta 3 activation","type":"exact"},{"name":"positive regulation of TGFB3 activation","type":"exact"},{"name":"positive regulation of TGFbeta 3 activation","type":"exact"},{"name":"up regulation of TGF-beta 3 activation","type":"exact"},{"name":"up regulation of TGFB3 activation","type":"exact"},{"name":"up regulation of TGFbeta 3 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"up-regulation of TGF-beta 3 activation","type":"exact"},{"name":"up-regulation of TGFB3 activation","type":"exact"},{"name":"up-regulation of TGFbeta 3 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"upregulation of TGF-beta 3 activation","type":"exact"},{"name":"upregulation of TGFB3 activation","type":"exact"},{"name":"upregulation of TGFbeta 3 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta3 activation","type":"exact"}],"termid":"GO:1901400"}


id: PBO:0074016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 10","termid":"PBO:0074016"}


id: PBO:0075997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP3 antisense RNA 1","termid":"PBO:0075997"}


id: GO:0102990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8Z,11Z)-5-(pentadeca-8,11,14-trien-1-yl)resorcinol + S-adenosyl-L-methionine = (8Z,11Z)-5-(pentadeca- 8,11,14-trien-1-yl)resorcinol-3-methyl ether + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:26325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"5-n-alk(en)ylresorcinol O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9619","EC:2.1.1.n7"],"termid":"GO:0102990"}


id: GO:0047894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin = adenosine 3',5'-diphosphate + H+ + quercetin 3-sulfate.","definition_xrefs":["RHEA:13453","EC:2.8.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"flavonol 3-sulfotransferase activity","secondary_identifiers":["MetaCyc:FLAVONOL-3-SULFOTRANSFERASE-RXN","KEGG_REACTION:R02159"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin 3-sulfotransferase activity","type":"exact"},{"name":"flavonol 3-sulphotransferase activity","type":"exact"}],"termid":"GO:0047894"}


id: PR:O43063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03572","PRO:DNx","PANTHER:PTHR11599:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.10c","secondary_identifiers":["UniProtKB:O43063"],"synonyms":[{"name":"Spom972h-PSMB6","type":"exact"}],"termid":"PR:O43063"}


id: GO:1905724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trypanothione biosynthetic process.","definition_xrefs":["PMID:18949025","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of trypanothione biosynthetic process","termid":"GO:1905722"},{"relation_name":"positively_regulates","term_name":"trypanothione biosynthetic process","termid":"GO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"positive regulation of trypanothione biosynthetic process","synonyms":[{"name":"activation of trypanothione anabolism","type":"narrow"},{"name":"activation of trypanothione biosynthesis","type":"narrow"},{"name":"activation of trypanothione biosynthetic process","type":"narrow"},{"name":"activation of trypanothione formation","type":"narrow"},{"name":"activation of trypanothione synthesis","type":"narrow"},{"name":"positive regulation of trypanothione anabolism","type":"exact"},{"name":"positive regulation of trypanothione biosynthesis","type":"exact"},{"name":"positive regulation of trypanothione formation","type":"exact"},{"name":"positive regulation of trypanothione synthesis","type":"exact"},{"name":"up regulation of trypanothione anabolism","type":"exact"},{"name":"up regulation of trypanothione biosynthesis","type":"exact"},{"name":"up regulation of trypanothione biosynthetic process","type":"exact"},{"name":"up regulation of trypanothione formation","type":"exact"},{"name":"up regulation of trypanothione synthesis","type":"exact"},{"name":"up-regulation of trypanothione anabolism","type":"exact"},{"name":"up-regulation of trypanothione biosynthesis","type":"exact"},{"name":"up-regulation of trypanothione biosynthetic process","type":"exact"},{"name":"up-regulation of trypanothione formation","type":"exact"},{"name":"up-regulation of trypanothione synthesis","type":"exact"},{"name":"upregulation of trypanothione anabolism","type":"exact"},{"name":"upregulation of trypanothione biosynthesis","type":"exact"},{"name":"upregulation of trypanothione biosynthetic process","type":"exact"},{"name":"upregulation of trypanothione formation","type":"exact"},{"name":"upregulation of trypanothione synthesis","type":"exact"}],"termid":"GO:1905724"}


id: PBO:0080786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 6","termid":"PBO:0080786"}


id: PBO:0070201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 126 pseudogene","termid":"PBO:0070201"}


id: PBO:0028733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynine_level_during_vegetative_growth","termid":"PBO:0028733"}


id: PBO:0074114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 4 pseudogene 2","termid":"PBO:0074114"}


id: FYPO:0006234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002057","FYPO:0005447","FYPO:0002058"],"is_obsolete":false,"name":"increased cell population growth on gluconate carbon source","synonyms":[{"name":"increased growth on gluconate carbon source","type":"broad"},{"name":"increased vegetative cell growth on gluconate carbon source","type":"exact"}],"termid":"FYPO:0006234"}


id: GO:0099169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane of a symmetric synapse consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic specialization membrane of symmetric synapse (obsolete GO:0099169)","termid":"GO:0099169"}


id: MONDO:0004248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the infratentorial region of the brain and occurs during childhood.","definition_xrefs":["NCIT:C9041"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infratentorial cancer","termid":"MONDO:0003107"},{"relation_name":"is_a","term_name":"childhood infratentorial neoplasm","termid":"MONDO:0002915"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"infratentorial ependymal tumor","termid":"MONDO:0020685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric infratentorial ependymoma","secondary_identifiers":["DOID:7501","MEDGEN:82949","UMLS:C0278599"],"synonyms":[{"name":"childhood infratentorial ependymoma","type":"exact"},{"name":"infratentorial ependymoma","type":"exact"},{"name":"pediatric infratentorial ependymoma","type":"exact"}],"termid":"MONDO:0004248","xrefs":{"Monarch":{"xref_id":"0004248"}}}


id: PBO:0083612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynamin-like GTPase required for vacuolar sorting; promotes fission of retrograde transport carriers from endosome; also involved in actin cytoskeleton organization, endocytosis, late Golgi-retention of some proteins, regulation of peroxisome biogenesis","termid":"PBO:0083612"}


id: GO:0006410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cellular synthesis of DNA on a template of RNA.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription, RNA-dependent (obsolete GO:0006410)","synonyms":[{"name":"transcription, RNA-dependent","type":"exact"}],"termid":"GO:0006410"}


id: PBO:0078553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 43","termid":"PBO:0078553"}


id: GO:0045130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + keratan = adenosine 3',5'-bisphosphate + keratan 6'-sulfate.","definition_xrefs":["EC:2.8.2.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan sulfotransferase activity","termid":"GO:0050698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"keratan sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2046175","MetaCyc:KERATAN-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl keratan sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:keratan 6'-sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylylsulfate:keratan sulfotransferase activity","type":"related"},{"name":"keratan sulfate Gal-6-sulfotransferase activity","type":"exact"},{"name":"keratan sulfate sulfotransferase activity","type":"related"},{"name":"keratan sulphotransferase activity","type":"exact"}],"termid":"GO:0045130"}


id: PBO:0085900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in mitochondrial DNA maintenance; required for slowed DNA synthesis-induced filamentous growth","termid":"PBO:0085900"}


id: MONDO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low compliance bladder","secondary_identifiers":["DOID:12144","SCTID:9009001","UMLS:C0489967","ICD9:596.52","MEDGEN:635444"],"synonyms":[{"name":"hyperactivity of bladder","type":"exact"},{"name":"hypertonic bladder","type":"exact"},{"name":"hypertonicity of bladder","type":"exact"},{"name":"low bladder compliance","type":"exact"}],"termid":"MONDO:0001446","xrefs":{"Monarch":{"xref_id":"0001446"}}}


id: GO:0030209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dermatan sulfate proteoglycans, which contain glycosaminoglycan repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan catabolic process","termid":"GO:0030167"},{"relation_name":"is_a","term_name":"dermatan sulfate proteoglycan metabolic process","termid":"GO:0050655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"dermatan sulfate proteoglycan catabolic process","synonyms":[{"name":"chondroitin sulfate B catabolic process","type":"exact"},{"name":"chondroitin sulfate B catabolism","type":"exact"},{"name":"dermatan sulfate breakdown","type":"exact"},{"name":"dermatan sulfate catabolism","type":"exact"},{"name":"dermatan sulfate degradation","type":"exact"},{"name":"dermatan sulphate catabolic process","type":"exact"},{"name":"dermatan sulphate catabolism","type":"exact"}],"termid":"GO:0030209"}


id: GO:0031253
data:
  {"annotated_genes":["SJAG_02989","SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98737,87898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070250"}]},"cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a plasma membrane bounded cell surface projection.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01978":null,"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cell projection membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane extension","type":"related"},{"name":"membrane projection","type":"related"}],"termid":"GO:0031253","terms_by_termid":{"GO:0070250":null}}


id: MONDO:0859371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhabdomyolysis, susceptibility to, 1","secondary_identifiers":["UMLS:C5774307","OMIM:620235","MEDGEN:1824080"],"termid":"MONDO:0859371","xrefs":{"Monarch":{"xref_id":"0859371"}}}


id: PR:P41893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A low molecular weight phosphotyrosine protein phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low molecular weight phosphotyrosine protein phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.12c","secondary_identifiers":["UniProtKB:P41893"],"synonyms":[{"name":"PTPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACP1","type":"exact"},{"name":"low molecular weight cytosolic acid phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"small tyrosine phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41893"}


id: PBO:0038775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T3","termid":"PBO:0038775"}


id: PBO:0000964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic diphosphatase (predicted)","termid":"PBO:0000964"}


id: GO:0032464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein homooligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein oligomerization","termid":"GO:0032461"},{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"positively_regulates","term_name":"protein homooligomerization","termid":"GO:0051260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein homooligomerization","synonyms":[{"name":"activation of protein homooligomerization","type":"narrow"},{"name":"induction of protein homooligomerization","type":"related"},{"name":"stimulation of protein homooligomerization","type":"narrow"},{"name":"up regulation of protein homooligomerization","type":"exact"},{"name":"up-regulation of protein homooligomerization","type":"exact"},{"name":"upregulation of protein homooligomerization","type":"exact"}],"termid":"GO:0032464"}


id: GO:1903497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 11-deoxycorticosterone stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mr","GO_REF:0000071","PMID:3585228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to 11-deoxycorticosterone","termid":"GO:1903496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 11-deoxycorticosterone","termid":"GO:1903497"}


id: PBO:0069352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 612, pseudogene","termid":"PBO:0069352"}


id: PBO:0086125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for function of the Sit4p protein phosphatase; forms a complex with Sit4p; member of a family of similar proteins including Sap4p, Sap185p, and Sap190p; protein abundance increases in response to DNA replication stress; SAP155 has a paralog, SAP4, that arose from the whole genome duplication","termid":"PBO:0086125"}


id: GO:0021550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata development","synonyms":[{"name":"medulla development","type":"related"},{"name":"myelencephalon development","type":"related"}],"termid":"GO:0021550"}


id: GO:0034244
data:
  {"annotated_genes":["SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117676],"is_not":false,"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription, elongation","termid":"GO:0032785"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase II","termid":"GO:0034243"},{"relation_name":"negatively_regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090041"],"synonyms":[{"name":"negative regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0034244","terms_by_termid":{"GO:0034244":null}}


id: PBO:0062775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 3","termid":"PBO:0062775"}


id: PBO:0074536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA I","termid":"PBO:0074536"}


id: GO:0036403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8S,9E,11Z,14Z)-8-hydroperoxyicosa-5,9,11,14-tetraenoate.","definition_xrefs":["GOC:lb","PMID:10625675","RHEA:38675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arachidonate 8(S)-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R07053"],"synonyms":[{"name":"8(S)-lipoxygenase activity","type":"broad"},{"name":"8-lipoxygenase (S-type)","type":"broad"}],"termid":"GO:0036403"}


id: PBO:0051425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-2 (pseudogene)","termid":"PBO:0051425"}


id: MONDO:0100542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous condition characterized by cellular proliferation of hematopoietic cells where a substantial proportion of the cells are derived from a single hematopoietic stem cell lineage.","definition_xrefs":["PMID:34215849","NCIT:C162188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premalignant hematological system disease","termid":"MONDO:0060782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"clonal hematopoiesis","secondary_identifiers":["UMLS:C5206406","MEDGEN:1694554"],"termid":"MONDO:0100542","xrefs":{"Monarch":{"xref_id":"0100542"}}}


id: FYPO:0001834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoglycerate mutase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal phosphoglycerate mutase activity","termid":"FYPO:0001834"}


id: GO:1902884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to oxidative stress.","definition_xrefs":["GO_REF:0000058","PMID:16899554","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to oxidative stress","termid":"GO:1902882"},{"relation_name":"positively_regulates","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to oxidative stress","synonyms":[{"name":"activation of response to oxidative stress","type":"narrow"},{"name":"up regulation of response to oxidative stress","type":"exact"},{"name":"up-regulation of response to oxidative stress","type":"exact"},{"name":"upregulation of response to oxidative stress","type":"exact"}],"termid":"GO:1902884"}


id: MONDO:0011521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 1p36.","definition_xrefs":["DOID:0110882","PMID:19122664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 7","secondary_identifiers":["UMLS:C1854573","MESH:C565353","OMIM:605225","MEDGEN:381452"],"synonyms":[{"name":"IBD7","type":"exact"},{"name":"inflammatory bowel disease 7","type":"exact"},{"name":"inflammatory bowel disease type 7","type":"exact"}],"termid":"MONDO:0011521","xrefs":{"Monarch":{"xref_id":"0011521"}}}


id: PBO:0006198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_modification","termid":"PBO:0006198"}


id: GO:0035452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of plastid membrane","synonyms":[{"name":"extrinsic to plastid membrane","type":"narrow"},{"name":"peripheral to plastid membrane","type":"exact"}],"termid":"GO:0035452"}


id: PBO:0068669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 50, pseudogene","termid":"PBO:0068669"}


id: GO:0140603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + H+ Pi. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP hydrolysis activity (obsolete GO:0140603)","termid":"GO:0140603"}


id: PBO:0044141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 7","termid":"PBO:0044141"}


id: MONDO:0011878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Worth syndrome (obsolete MONDO:0011878)","termid":"MONDO:0011878","xrefs":{"Monarch":{"xref_id":"0011878"}}}


id: MONDO:0016265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometrial stromal sarcoma (obsolete MONDO:0016265)","termid":"MONDO:0016265","xrefs":{"Monarch":{"xref_id":"0016265"}}}


id: PBO:0038703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 16","termid":"PBO:0038703"}


id: MONDO:1010987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in puma.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, puma","secondary_identifiers":["OMIA:000487-9696"],"termid":"MONDO:1010987","xrefs":{"Monarch":{"xref_id":"1010987"}}}


id: PR:Q09859
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide methionine sulfoxide reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01823","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide methionine sulfoxide reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.05c","secondary_identifiers":["UniProtKB:Q09859"],"synonyms":[{"name":"Spom972h-MSRA","type":"exact"},{"name":"peptide Met(O) reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peptide-methionine (S)-S-oxide reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein-methionine-S-oxide reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09859"}


id: CHEBI:30911
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucitol","termid":"CHEBI:30911"}


id: MONDO:0037858
data:
  {"annotated_genes":["SJAG_03641","SJAG_01417","SJAG_01164","SJAG_03222","SJAG_01147","SJAG_03553","SJAG_04016","SJAG_04499","SJAG_02007","SJAG_02306","SJAG_03701","SJAG_02397","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011614"},{"annotations":[86784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[86417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[85216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014576"},{"annotations":[84918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[85444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[85795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[85064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[85130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[85773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[86118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"},{"annotations":[84985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"},{"annotations":[85573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"}]},"cv_name":"mondo","definition":"A group of genetic disorders that result from the inability to produce or use an enzyme required to oxidize fatty acids, resulting in an inability to generate energy from fatty acid sources.","definition_xrefs":["NCIT:C117115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01147":null,"SJAG_01164":null,"SJAG_01417":null,"SJAG_02007":null,"SJAG_02306":null,"SJAG_02397":null,"SJAG_03222":null,"SJAG_03290":null,"SJAG_03553":null,"SJAG_03641":null,"SJAG_03701":null,"SJAG_04016":null,"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"inherited fatty acid metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:39929009","UMLS:C0268634","MEDGEN:468968","NANDO:2100162"],"synonyms":[{"name":"disorder of fat oxidation","type":"related"},{"name":"disorder of fatty acid metabolism","type":"exact"},{"name":"disorders of fatty-acid metabolism","type":"related"},{"name":"fatty acid metabolism disorder","type":"exact"},{"name":"inherited fatty acid metabolism disorder","type":"exact"}],"termid":"MONDO:0037858","terms_by_termid":{"MONDO:0009529":null,"MONDO:0011582":null,"MONDO:0011614":null,"MONDO:0013675":null,"MONDO:0013762":null,"MONDO:0014132":null,"MONDO:0014576":null,"MONDO:0014611":null,"MONDO:0014803":null,"MONDO:0015003":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0957382":null},"xrefs":{"Monarch":{"xref_id":"0037858"}}}


id: PBO:0082044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyglutarate transhydrogenase, and minor D-lactate dehydrogenase; converts D-2-hydroxyglutarate (D-2HG), an oncometabolite, to alpha-ketoglutarate in the presence of FAD, with concomitant reduction of pyruvate to D-lactate; minor lactate dehydrogenase activity; component of the retrograde regulon that consists of genes whose expression are stimulated by damage to mitochondria and reduced in cells grown with glutamate as the sole nitrogen source; located in the cytoplasm","termid":"PBO:0082044"}


id: PATO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An 1-D extent quality inhering in two-dimensional bearer by virtue of being equal to the distance around it.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Perimeter"],"direct_ancestors":[{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perimeter","termid":"PATO:0001711"}


id: FYPO:0005766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal in regions where nucleosomes are depleted.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"increased replication fork pausing at nucleosome-depleted regions","synonyms":[{"name":"increased replication fork pausing at nucleosome-depleted regions during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at nucleosome-depleted regions during vegetative growth","type":"exact"}],"termid":"FYPO:0005766"}


id: PBO:0050132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 42","termid":"PBO:0050132"}


id: PBO:0052762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 54","termid":"PBO:0052762"}


id: GO:1901238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + tungstate(in) = ADP + phosphate + tungstate(out).","definition_xrefs":["PMID:16952940","RHEA:35027","PMID:21784948","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type tungstate transporter activity","secondary_identifiers":["GO:1901237","MetaCyc:TRANS-RXN-242B","EC:7.3.2.6"],"synonyms":[{"name":"ATPase-coupled tungstate transmembrane transporter activity","type":"related"},{"name":"tungstate transmembrane transporter activity","type":"broad"},{"name":"tungstate transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:1901238"}


id: PBO:0045253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal light intermediate chain 1","termid":"PBO:0045253"}


id: MONDO:0014992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lissencephaly (disease) in which the cause of the disease is a mutation in the TMTC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 8","secondary_identifiers":["MEDGEN:934613","OMIM:617255","DOID:0112233","UMLS:C4310646"],"synonyms":[{"name":"LIS8","type":"exact"},{"name":"TMTC3 lissencephaly (disease)","type":"exact"},{"name":"lissencephaly (disease) caused by mutation in TMTC3","type":"exact"},{"name":"lissencephaly 8","type":"exact"},{"name":"lissencephaly 8; LIS8","type":"exact"},{"name":"lissencephaly type 8","type":"exact"}],"termid":"MONDO:0014992","xrefs":{"Monarch":{"xref_id":"0014992"}}}


id: PBO:0079095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 8-1","termid":"PBO:0079095"}


id: PBO:0075514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 3","termid":"PBO:0075514"}


id: PBO:0081490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 385B","termid":"PBO:0081490"}


id: GO:0051071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the pyruvylated galactose residue 4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3-. The galactose residue is part of a larger polysaccharide chain.","definition_xrefs":["GOC:ai","PMID:15173185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"4,6-pyruvylated galactose residue metabolic process","synonyms":[{"name":"4,6-pyruvylated galactose residue metabolism","type":"exact"},{"name":"4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3 metabolic process","type":"exact"},{"name":"4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3 metabolism","type":"exact"},{"name":"PvGal metabolic process","type":"exact"},{"name":"PvGal metabolism","type":"exact"}],"termid":"GO:0051071"}


id: SO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified selenocysteine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_selenocysteine","secondary_identifiers":["MOD:01158"],"synonyms":[{"name":"modified L selenocysteine","type":"exact"},{"name":"modified L-selenocysteine","type":"exact"}],"termid":"SO:0001402"}


id: PBO:0070016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1313, pseudogene","termid":"PBO:0070016"}


id: PBO:0062414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 43 pseudogene","termid":"PBO:0062414"}


id: MONDO:0004289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exophytic, slow growing, well differentiated and non-metastasizing squamous cell carcinoma with pushing margins that arises from the glottic area of the larynx. It usually presents with hoarseness.","definition_xrefs":["NCIT:C8189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larynx verrucous carcinoma","termid":"MONDO:0002766"},{"relation_name":"is_a","term_name":"glottis squamous cell carcinoma","termid":"MONDO:0004080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"glottis verrucous carcinoma","secondary_identifiers":["UMLS:C0280329","DOID:7583","MEDGEN:83631"],"synonyms":[{"name":"glottic verrucous carcinoma","type":"exact"},{"name":"glottis verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of glottis","type":"exact"},{"name":"verrucous carcinoma of the glottis","type":"exact"}],"termid":"MONDO:0004289","xrefs":{"Monarch":{"xref_id":"0004289"}}}


id: PBO:0091850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA primary transcript (predicted)","termid":"PBO:0091850"}


id: GO:0034548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-cyclopropylammeline + H2O = N-cyclopropylammelide + NH3.","definition_xrefs":["UM-BBD_reactionID:r0826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-cyclopropylammeline deaminase activity","secondary_identifiers":["MetaCyc:RXN-8019"],"termid":"GO:0034548"}


id: MOD:00861
data:
  {"annotated_genes":["SJAG_01587","SJAG_02183","SJAG_01671","SJAG_02763","SJAG_02472","SJAG_02498","SJAG_00318","SJAG_02592","SJAG_03012","SJAG_04551","SJAG_00331","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"},{"annotations":[80251,80513,80521,80261,80440,80519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00042"},{"annotations":[119055,119054,80356,119250,119053,80355,119056,119251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[80218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00159"},{"annotations":[118895,119179,118896,118897,119087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00696"}]},"cv_name":"PSI-MOD","definition":"A protein modification that produces an amino acid residue containing a phosphorus atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00318":null,"SJAG_00331":null,"SJAG_01587":null,"SJAG_01671":null,"SJAG_02183":null,"SJAG_02472":null,"SJAG_02498":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null,"SJAG_04551":null,"SJAG_04972":null},"genotype_count":0,"is_obsolete":false,"name":"phosphorus containing modified residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:36408920":null},"termid":"MOD:00861","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00042":null,"MOD:00046":null,"MOD:00159":null,"MOD:00226":null,"MOD:00696":null}}


id: PBO:0049603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 6","termid":"PBO:0049603"}


id: PBO:0029355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_centromere","termid":"PBO:0029355"}


id: MONDO:0010207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wooly hair-hypotrichosis-everted lower lip-outstanding ears syndrome","secondary_identifiers":["MESH:C536746","Orphanet:1409","SCTID:239023005","OMIM:278200","MEDGEN:98033","UMLS:C0406718"],"synonyms":[{"name":"Salamon syndrome","type":"exact"},{"name":"woolly hair hypotrichosis everted lower lip and outstanding ears","type":"related"},{"name":"woolly hair, hypotrichosis, everted LOWER LIP, and outstanding ears","type":"related"},{"name":"wooly hair hypotrichosis everted lower lip and outstanding ears","type":"related"},{"name":"wooly hair, hypotrichosis, everted LOWER LIP, and outstanding ears","type":"related"},{"name":"wooly hair-hypotrichosis-everted lower lip-outstanding ears syndrome","type":"exact"}],"termid":"MONDO:0010207","xrefs":{"Monarch":{"xref_id":"0010207"}}}


id: SO:0000855
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A homologous_region that is orthologous to another region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"orthologous","termid":"SO:0000858"},{"relation_name":"is_a","term_name":"homologous_region","termid":"SO:0000853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Ortholog#Orthology"],"synonyms":[{"name":"ortholog","type":"exact"},{"name":"orthologous region","type":"exact"},{"name":"orthologue","type":"exact"}],"termid":"SO:0000855"}


id: PBO:0079775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UGDH antisense RNA 1","termid":"PBO:0079775"}


id: PBO:0090813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase [glutamine-hydrolyzing] Gua2","termid":"PBO:0090813"}


id: MONDO:0015475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare head and neck malformation (obsolete MONDO:0015475)","secondary_identifiers":["Orphanet:155832"],"termid":"MONDO:0015475","xrefs":{"Monarch":{"xref_id":"0015475"}}}


id: PBO:0077244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 5A","termid":"PBO:0077244"}


id: PBO:0004320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf5-like","termid":"PBO:0004320"}


id: GO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An extrinsic apoptotic signaling pathway initiated by the binding of the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) to a death receptor on the cell surface.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:21785459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:0036462"}


id: GO:0046036
data:
  {"annotated_genes":["SJAG_03676","SJAG_00533","SJAG_05024","SJAG_02887","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76053],"is_not":false,"summary":null,"term":"GO:0046036"},{"annotations":[62943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[64501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[67733,92734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CTP, cytidine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_02887":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CTP metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006243"],"synonyms":[{"name":"CTP deamination","type":"narrow"},{"name":"CTP metabolism","type":"exact"}],"termid":"GO:0046036","terms_by_termid":{"GO:0006241":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null}}


id: GO:0015572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of N-acetylglucosamine from one side of a membrane to the other. The D isomer of N-acetylglucosamine is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"N-acetylglucosamine transmembrane transporter activity","secondary_identifiers":["GO:0015580"],"synonyms":[{"name":"D-GlcNAc transmembrane transporter activity","type":"exact"},{"name":"N-Acetyl-D-glucosamine permease","type":"related"},{"name":"N-acetyl-D-glucosamine transmembrane transporter activity","type":"exact"},{"name":"N-acetylchitosamine transmembrane transporter activity","type":"exact"},{"name":"N-acetylglucosamine permease activity","type":"related"}],"termid":"GO:0015572"}


id: PBO:0091793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, phosphate responsive","termid":"PBO:0091793"}


id: PBO:0070662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 33","termid":"PBO:0070662"}


id: PBO:0059816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 42","termid":"PBO:0059816"}


id: PATO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color brightness which is relatively low.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color brightness","termid":"PATO:0000016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low brightness","synonyms":[{"name":"dark","type":"exact"}],"termid":"PATO:0000327"}


id: GO:1902136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-secoisolariciresinol.","definition_xrefs":["GOC:TermGenie","PMID:8910615","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(-)-secoisolariciresinol metabolic process","synonyms":[{"name":"(-)-secoisolariciresinol metabolism","type":"exact"}],"termid":"GO:1902136"}


id: PBO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase (predicted)","termid":"PBO:0001224"}


id: GO:0032698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-15 production","termid":"GO:0032658"},{"relation_name":"negatively_regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-15 production","secondary_identifiers":["GO:0045373"],"synonyms":[{"name":"down regulation of interleukin-15 production","type":"exact"},{"name":"down-regulation of interleukin-15 production","type":"exact"},{"name":"downregulation of interleukin-15 production","type":"exact"},{"name":"inhibition of interleukin-15 production","type":"narrow"},{"name":"negative regulation of IL-15 production","type":"exact"},{"name":"negative regulation of interleukin-15 biosynthetic process","type":"narrow"}],"termid":"GO:0032698"}


id: PBO:0052562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2B","termid":"PBO:0052562"}


id: PBO:0114474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTPase related protein","termid":"PBO:0114474"}


id: PBO:0011485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human COMT catechol O-methyltransferase homolog 1","termid":"PBO:0011485"}


id: GO:0032218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of riboflavin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Riboflavin (vitamin B2) is a water-soluble B-complex vitamin, converted in the cell to FMN and FAD, cofactors required for the function of flavoproteins.","definition_xrefs":["PMID:16204239","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"riboflavin transport","termid":"GO:0032218"}


id: MONDO:0010322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 2","secondary_identifiers":["UMLS:C0796207","MESH:C563135","GARD:22675","MEDGEN:162922","OMIM:300428","DOID:0112016"],"synonyms":[{"name":"MRX2","type":"exact"},{"name":"intellectual disability, X-linked 2","type":"exact"},{"name":"mental retardation, X-linked 2","type":"related"}],"termid":"MONDO:0010322","xrefs":{"Monarch":{"xref_id":"0010322"}}}


id: GO:0034981
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains CREB and FHL3, and is involved in transcriptional regulation.","definition_xrefs":["PMID:11046156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FHL3-CREB complex","termid":"GO:0034981"}


id: GO:0031681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G-protein beta subunit.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"G-protein beta-subunit binding","synonyms":[{"name":"G-beta protein subunit binding","type":"exact"}],"termid":"GO:0031681"}


id: PBO:0036210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0036210"}


id: SO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature stop codon is gained in an upstream open reading frame.","definition_xrefs":["PMID:32461616","PMID:32926138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_stop_codon_variant","termid":"SO:0002386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_stop_codon_gain_variant","synonyms":[{"name":"uSTOP_gained","type":"exact"}],"termid":"SO:0002388"}


id: GO:0008071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the ovarian follicle cells along the dorsal-ventral axis by a gene product encoded by somatic cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral axis specification, ovarian follicular epithelium","termid":"GO:0008069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maternal determination of dorsal/ventral axis, ovarian follicular epithelium, soma encoded","synonyms":[{"name":"maternal determination of dorsal-ventral axis, ovarian follicular epithelium, soma encoded","type":"exact"},{"name":"maternal determination of dorsal/ventral axis, follicular epithelium, soma encoded","type":"broad"},{"name":"maternal determination of dorsoventral axis, ovarian follicular epithelium, soma encoded","type":"exact"}],"termid":"GO:0008071"}


id: MONDO:0100086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition affecting an unborn or newly born individual, where the perinatal period is defined in humans as commencing at 22 completed weeks (154 days) of gestation and ending seven completed days after birth. Other, broader definitions of perinatal period cover five months before birth to one month after birth.","definition_xrefs":["Wikipedia:Perinatal_mortality","NCIT:C35095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perinatal disease","secondary_identifiers":["MEDGEN:75717","ICD10CM:P00-P96","EFO:0010238","UMLS:C0270075"],"synonyms":[{"name":"perinatal condition","type":"exact"},{"name":"perinatal disorder","type":"exact"}],"termid":"MONDO:0100086","xrefs":{"Monarch":{"xref_id":"0100086"}}}


id: GO:0045819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycogen catabolic process","termid":"GO:0005981"},{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of glycogen metabolic process","termid":"GO:0070875"},{"relation_name":"positively_regulates","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"positive regulation of glycogen catabolic process","synonyms":[{"name":"activation of glycogen catabolic process","type":"narrow"},{"name":"positive regulation of glycogen breakdown","type":"exact"},{"name":"positive regulation of glycogen catabolism","type":"exact"},{"name":"positive regulation of glycogen degradation","type":"exact"},{"name":"positive regulation of glycogenolysis","type":"exact"},{"name":"stimulation of glycogen catabolic process","type":"narrow"},{"name":"up regulation of glycogen catabolic process","type":"exact"},{"name":"up-regulation of glycogen catabolic process","type":"exact"},{"name":"upregulation of glycogen catabolic process","type":"exact"}],"termid":"GO:0045819"}


id: MONDO:0859375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with hypotonia, myopathy, and brain abnormalities","secondary_identifiers":["OMIM:620240","MEDGEN:1840906","UMLS:C5830270"],"termid":"MONDO:0859375","xrefs":{"Monarch":{"xref_id":"0859375"}}}


id: GO:0072029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a long nephron over time, from its formation to the mature structure. Long nephrons are associated with juxtamedullary glomeruli and extend into the inner medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long nephron development","synonyms":[{"name":"juxtamedullary nephron development","type":"related"}],"termid":"GO:0072029"}


id: GO:1990430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein that is part of an extracellular matrix.","definition_xrefs":["PMID:22355679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"extracellular matrix protein binding","termid":"GO:1990430"}


id: MONDO:0018025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chronic actinic dermatitis","secondary_identifiers":["icd11.foundation:248339081","MEDGEN:76406","Orphanet:330064","UMLS:C0282309","SCTID:52636001","GARD:21506","ICD9:692.73"],"synonyms":[{"name":"actinic reticuloid","type":"exact"},{"name":"chronic photosensitivity dermatitis","type":"exact"}],"termid":"MONDO:0018025","xrefs":{"Monarch":{"xref_id":"0018025"}}}


id: PBO:0066884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 184","termid":"PBO:0066884"}


id: GO:0043031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macrophage activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"negatively_regulates","term_name":"macrophage activation","termid":"GO:0042116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage activation","synonyms":[{"name":"down regulation of macrophage activation","type":"exact"},{"name":"down-regulation of macrophage activation","type":"exact"},{"name":"downregulation of macrophage activation","type":"exact"},{"name":"inhibition of macrophage activation","type":"narrow"},{"name":"negative regulation of macrophage polarization","type":"exact"}],"termid":"GO:0043031"}


id: PBO:0036113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_glycosylation_during_vegetative_growth","termid":"PBO:0036113"}


id: GO:0010153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell expansion that results in an increase in cell size along the axis of an organ in a polarized fashion.","definition_xrefs":["PMID:11978864"],"gene_count":0,"genotype_count":0,"name":"obsolete polar cell elongation (obsolete GO:0010153)","synonyms":[{"name":"polar cell elongation","type":"exact"},{"name":"polarity-dependent cell elongation","type":"narrow"}],"termid":"GO:0010153"}


id: PBO:0091955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive poison Wtf13","termid":"PBO:0091955"}


id: PBO:0005558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-binding dehydrogenase (predicted)","termid":"PBO:0005558"}


id: SO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is mono- methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_monomethylation_site","synonyms":[{"name":"H3K79 mono-methylation site","type":"exact"},{"name":"H3K79me1","type":"related"}],"termid":"SO:0001710"}


id: GO:0019978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-3.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-3 binding","synonyms":[{"name":"IL-3 binding","type":"exact"}],"termid":"GO:0019978"}


id: PBO:0028780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-progressively_shortening_telomeres","termid":"PBO:0028780"}


id: PBO:0049737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit alpha pseudogene 1","termid":"PBO:0049737"}


id: PBO:0028676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_acetylation_at_centromere_outer_repeat","termid":"PBO:0028676"}


id: PBO:0087429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase; ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; contributes to the oligomerization of the complex, which in turn determines the shape of inner membrane cristae; phosphorylated","termid":"PBO:0087429"}


id: MOD:01995
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-formyl-L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formyl-L-tryptophan","termid":"MOD:01106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2-formyl-L-tryptophan","synonyms":[{"name":"N2FoTrp","type":"exact"}],"termid":"MOD:01995"}


id: GO:0047555
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78777],"is_not":false,"summary":null,"term":"GO:0047555"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-cyclic GMP + H2O = GMP + H+.","definition_xrefs":["RHEA:16957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"3',5'-cyclic-GMP phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN","GO:0004116","Reactome:R-HSA-4086392","Reactome:R-HSA-74059","Reactome:R-HSA-418456","EC:3.1.4.35"],"synonyms":[{"name":"3',5' cyclic-GMP phosphodiesterase activity","type":"exact"},{"name":"3',5'-cyclic-GMP 5'-nucleotidohydrolase activity","type":"related"},{"name":"cGMP phosphodiesterase activity","type":"exact"},{"name":"cGMP-PDE","type":"related"},{"name":"cGMP-specific phosphodiesterase activity","type":"exact"},{"name":"cyclic 3',5'-GMP phosphodiesterase activity","type":"related"},{"name":"cyclic GMP phosphodiesterase activity","type":"exact"},{"name":"cyclic guanosine 3',5'-monophosphate phosphodiesterase activity","type":"related"},{"name":"cyclic guanosine 3',5'-phosphate phosphodiesterase activity","type":"related"},{"name":"guanosine cyclic 3',5'-phosphate phosphodiesterase activity","type":"exact"}],"termid":"GO:0047555","terms_by_termid":{"GO:0047555":null}}


id: GO:0070373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.","definition_xrefs":["GOC:add","ISBN:0121245462","ISBN:0896039986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of ERK1 and ERK2 cascade","termid":"GO:0070372"},{"relation_name":"negatively_regulates","term_name":"ERK1 and ERK2 cascade","termid":"GO:0070371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERK1 and ERK2 cascade","synonyms":[{"name":"down regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"down-regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"downregulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"inhibition of ERK1 and ERK2 cascade","type":"narrow"},{"name":"negative regulation of ERK cascade","type":"broad"},{"name":"negative regulation of ERK1 and ERK2 signaling pathway","type":"exact"},{"name":"negative regulation of ERK1 and ERK2 signalling pathway","type":"exact"},{"name":"negative regulation of ERK1 cascade","type":"narrow"},{"name":"negative regulation of ERK1/2 cascade","type":"exact"},{"name":"negative regulation of ERK2 cascade","type":"narrow"},{"name":"negative regulation of MAPK1 cascade","type":"narrow"},{"name":"negative regulation of MAPK3 cascade","type":"narrow"}],"termid":"GO:0070373"}


id: PBO:0078471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-9","termid":"PBO:0078471"}


id: PBO:0056732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 1","termid":"PBO:0056732"}


id: PBO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-6 (predicted)","termid":"PBO:0001157"}


id: PBO:0029809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_with_elongated_germ_tubes_and_cells_with_normal_morphology_(obsolete_FYPO:0002428)","termid":"PBO:0029809"}


id: MONDO:0021950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune oophoritis is a rare cause of primary ovarian insufficiency (POI). It happens when the body's immune system mistakenly attacks the ovaries causing inflammation, atrophy and fibrosis. These changes stop the ovaries from working normally. The main symptoms of autoimmune oophorotis are irregular or absent menstrual period (amenorrhea) and symptoms related to ovarian cysts such as abdominal cramping, bloating, nausea and vomiting. Autoimmune oophoritis may occur as part of autoimmune polyglandular syndrome type I and type II but has also been associated with lupus, pernicious anemia, myasthenia gravis and other autoimmune conditions. The underlying cause of autoimmune oophoritis is unknown. Diagnosis involves a special blood test which looks for anti-steroid or anti-ovarian antibodies, a pelvic ultrasound to look for enlarged cystic ovaries and tests to rule out other possible causes of POI. Management of autoimmune oophoritis involves emotional support, possible estrogen replacement therapy and management of other autoimmune conditions.","definition_xrefs":["GARD:0009461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"oophoritis","termid":"MONDO:0006877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune oophoritis","secondary_identifiers":["MEDGEN:163900","MESH:C538274","UMLS:C0878654"],"termid":"MONDO:0021950","xrefs":{"Monarch":{"xref_id":"0021950"}}}


id: GO:1905471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K79 dimethylation.","definition_xrefs":["PMID:27541139","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K79 dimethylation (obsolete GO:1905471)","synonyms":[{"name":"regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"regulation of histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:1905471"}


id: MONDO:0006939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the kidney. The cause is most often bacterial, but may also be fungal in nature. Signs and symptoms may include fever, chills, flank pain, painful and frequent urination, cloudy or bloody urine, and confusion.","definition_xrefs":["NCIT:C34965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine inflammatory disease","termid":"MONDO:0001786"},{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"pyelitis","termid":"MONDO:0006938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pyelonephritis","secondary_identifiers":["MEDGEN:19590","DOID:11400","UMLS:C0034186","EFO:1001141","ICD9:590.80","MESH:D011704","SCTID:45816000","MedDRA:10037596"],"synonyms":[{"name":"kidney infection","type":"exact"},{"name":"pyometrium","type":"related"}],"termid":"MONDO:0006939","xrefs":{"Monarch":{"xref_id":"0006939"}}}


id: PBO:0053768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1013","termid":"PBO:0053768"}


id: GO:0009934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem organization.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem structural organization","termid":"GO:0009933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem structural organization","synonyms":[{"name":"regulation of meristem organisation","type":"exact"},{"name":"regulation of meristem organization","type":"broad"}],"termid":"GO:0009934"}


id: PBO:0083998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 3; involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall; GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bacteria; binds AU-rich RNA","termid":"PBO:0083998"}


id: PBO:0078481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-1","termid":"PBO:0078481"}


id: PBO:0071386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 9","termid":"PBO:0071386"}


id: MONDO:0034670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic postaxial polydactyly (obsolete MONDO:0034670)","secondary_identifiers":["Orphanet:498467"],"termid":"MONDO:0034670","xrefs":{"Monarch":{"xref_id":"0034670"}}}


id: GO:0034081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that carries out enzymatic reactions involved in the biosynthesis of polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones.","definition_xrefs":["PMID:12636085","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"polyketide synthase complex","synonyms":[{"name":"PKS","type":"related"},{"name":"PKS complex","type":"exact"}],"termid":"GO:0034081"}


id: PBO:0053021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LANCL1 antisense RNA 1","termid":"PBO:0053021"}


id: MONDO:0005471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurally mediated hypotension is a sudden drop in blood pressure while an individual stands up. It occurs when there is an abnormal reflex interaction between the heart and the brain, both of which usually are structurally normal","definition_xrefs":["EFO:0005254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotensive disorder","termid":"MONDO:0005468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurally mediated hypotension","termid":"MONDO:0005471","xrefs":{"Monarch":{"xref_id":"0005471"}}}


id: FYPO:0006633
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119059,119047,118993],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001122"},{"annotations":[119327],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which cell length, i.e. the maximum distance between the cell ends, is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null,"SJAG_04332":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"increased cell length","references_by_uniquename":{"PMID:25866389":null,"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04332","SJAG_02592","SJAG_04312","SJAG_00266"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta","atf1delta","pka1delta"],"termid":"FYPO:0006633","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000102":null,"FYECO:0000137":null,"FYPO:0001122":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: GO:0010247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a phosphate ion stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of phosphate ion","synonyms":[{"name":"phosphate ion detection","type":"exact"},{"name":"phosphate ion perception","type":"related"},{"name":"phosphate ion sensing","type":"related"}],"termid":"GO:0010247"}


id: PBO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate mutase (predicted)","termid":"PBO:0002085"}


id: FYPO:0005621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains more adducts formed between a topoisomerase and DNA than normal.","definition_xrefs":["PMID:22730331","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased topoisomerase-DNA adduct level","synonyms":[{"name":"increased Top1-DNA adduct level","type":"narrow"},{"name":"increased Top1cc level","type":"narrow"},{"name":"increased topoisomerase I-DNA adduct level","type":"narrow"},{"name":"increased topoisomerase-DNA adduct level during mitotic cell cycle","type":"related"},{"name":"increased topoisomerase-DNA adduct level during vegetative growth","type":"exact"}],"termid":"FYPO:0005621"}


id: GO:0070930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein modification process in which a polypeptide is added to a nascent polypeptide cotranslationally by trans-translation.","definition_xrefs":["GOC:jh2","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"co-translational protein modification","termid":"GO:0043686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trans-translation-dependent protein tagging","synonyms":[{"name":"co-translational protein tagging","type":"exact"},{"name":"cotranslational protein tagging","type":"exact"},{"name":"protein modification by trans-translation","type":"exact"}],"termid":"GO:0070930"}


id: MONDO:0044715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metopic ridging-ptosis-facial dysmorphism syndrome (obsolete MONDO:0044715)","secondary_identifiers":["GARD:22047"],"termid":"MONDO:0044715","xrefs":{"Monarch":{"xref_id":"0044715"}}}


id: MOD:00399
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with iodoacetic acid, usually replacement of a reactive hydrogen with a methylcarboxy group.","definition_xrefs":["Unimod:6","DeltaMass:64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetic acid derivatized residue","synonyms":[{"name":"Carboxymethyl","type":"related"},{"name":"Carboxymethyl (on Cysteine)","type":"exact"},{"name":"Iodoacetic acid derivative","type":"related"}],"termid":"MOD:00399"}


id: PR:O94472
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.02 gene.","definition_xrefs":["UniProtKB:O94472","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pbn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.02","synonyms":[{"name":"Spom972h-SPCC1919.02","type":"exact"}],"termid":"PR:O94472"}


id: MONDO:0014840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the TCF3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia 8, autosomal dominant","secondary_identifiers":["DOID:0081140","OMIM:616941","UMLS:C4310786","GARD:16171","MEDGEN:934753"],"synonyms":[{"name":"AGM8","type":"exact"},{"name":"TCF3 autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 8, autosomal dominant","type":"exact"},{"name":"agammaglobulinemia 8, autosomal dominant; AGM8","type":"exact"},{"name":"agammaglobulinemia, autosomal dominant, due to TCF3 defect","type":"related"},{"name":"autosomal agammaglobulinemia caused by mutation in TCF3","type":"exact"}],"termid":"MONDO:0014840","xrefs":{"Monarch":{"xref_id":"0014840"}}}


id: GO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed orientation of natural killer cell signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with a cell displaying natural killer cell activating ligands.","definition_xrefs":["PMID:9759849","PMID:12615886","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of lymphocyte polarity","termid":"GO:0001767"},{"relation_name":"part_of","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of natural killer cell polarity","synonyms":[{"name":"NK cell polarization","type":"exact"},{"name":"establishment of NK cell polarity","type":"exact"},{"name":"natural killer cell polarization","type":"exact"}],"termid":"GO:0001770"}


id: PBO:0003989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp7 (predicted)","termid":"PBO:0003989"}


id: PBO:0071858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 53","termid":"PBO:0071858"}


id: PBO:0058991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motilin receptor","termid":"PBO:0058991"}


id: SO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a GC dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000924 insert_GC (obsolete SO:0000924)","synonyms":[{"name":"insert GC","type":"exact"}],"termid":"SO:0000924"}


id: MONDO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of non-invasive neoplastic lesions that arise from the terminal ductal lobular units of the breast. There is atypical small epithelial cell proliferation. Pagetoid involvement of the terminal ducts may or may not be present. In the minority of cases, there is a risk for subsequent development of invasive ductal or invasive lobular carcinoma.","definition_xrefs":["NCIT:C27939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma in situ","termid":"MONDO:0004658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lobular neoplasia","secondary_identifiers":["DOID:3010","MEDGEN:167824","UMLS:C0861352"],"synonyms":[{"name":"LIN","type":"exact"},{"name":"LN","type":"exact"},{"name":"lobular intraepithelial neoplasia","type":"exact"},{"name":"lobular neoplasia","type":"exact"}],"termid":"MONDO:0002486","xrefs":{"Monarch":{"xref_id":"0002486"}}}


id: FYPO:0003607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle","termid":"FYPO:0000120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000120","FYPO:0000002","FYPO:0005447","FYPO:0002399"],"is_obsolete":false,"name":"abnormal spindle morphology","synonyms":[{"name":"spindle morphology: abnormal","type":"related"}],"termid":"FYPO:0003607"}


id: GO:1902823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["GOC:pad","GOC:PARL","GO_REF:0000058","PMID:23949442","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of late endosome to lysosome transport","termid":"GO:1902822"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"negatively_regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of late endosome to lysosome transport","synonyms":[{"name":"down regulation of late endosome to lysosome transport","type":"exact"},{"name":"down-regulation of late endosome to lysosome transport","type":"exact"},{"name":"downregulation of late endosome to lysosome transport","type":"exact"},{"name":"inhibition of late endosome to lysosome transport","type":"narrow"}],"termid":"GO:1902823"}


id: PBO:0081340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 140","termid":"PBO:0081340"}


id: PBO:0081682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 603, pseudogene","termid":"PBO:0081682"}


id: PBO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation regulator Gcn1 (predicted)","termid":"PBO:0001424"}


id: GO:0140972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of AIM2 inflammasome complex assembly.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of AIM2 inflammasome complex assembly","termid":"GO:0140971"},{"relation_name":"negatively_regulates","term_name":"AIM2 inflammasome complex assembly","termid":"GO:0140970"},{"relation_name":"part_of","term_name":"negative regulation of inflammasome-mediated signaling pathway","termid":"GO:0141086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of AIM2 inflammasome complex assembly","termid":"GO:0140972"}


id: MONDO:0007846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"KBG syndrome is a rare condition characterized by a typical facial dysmorphism, macrodontia of the upper central incisors, skeletal (mainly costovertebral) anomalies and developmental delay.","definition_xrefs":["Orphanet:2332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"KBG syndrome","secondary_identifiers":["ICD9:759.89","DOID:14780","MESH:C537015","OMIM:148050","icd11.foundation:465550090","GARD:82","MEDGEN:66317","NORD:1322","SCTID:711156009","UMLS:C0220687"],"synonyms":[{"name":"KBG syndrome","type":"exact"},{"name":"KBGS","type":"related"},{"name":"macrodontia, intellectual disability, characteristic facies, short stature, and skeletal anomalies","type":"related"},{"name":"macrodontia, mental retardation, characteristic facies, short stature, and skeletal anomalies","type":"related"},{"name":"short stature, characteristic facies, macrodontia, intellectual disability, and skeletal anomalies","type":"related"},{"name":"short stature, characteristic facies, macrodontia, mental retardation, and skeletal anomalies","type":"related"},{"name":"short stature-facial and skeletal anomalies-intellectual disability-macrodontia syndrome","type":"exact"}],"termid":"MONDO:0007846","xrefs":{"Monarch":{"xref_id":"0007846"}}}


id: FYPO:0007417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere clustering is normal (i.e. indistinguishable from wild type) during G0 phase. Normally, telomeres cluster at the nuclear periphery during vegetative growth or G0, but whereas telomeres form two to three clusters in vegetative cells, a single cluster forms in G0.","definition_xrefs":["PMID:31980821","GO:0120110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere clustering during G0","synonyms":[{"name":"normal telomere clustering during cell quiescence","type":"exact"},{"name":"normal telomere clustering during quiescence","type":"exact"}],"termid":"FYPO:0007417"}


id: PBO:0071609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 27","termid":"PBO:0071609"}


id: GO:0006959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated through a body fluid.","definition_xrefs":["ISBN:0198506732","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"humoral immune response","secondary_identifiers":["Wikipedia:Humoral_immunity"],"termid":"GO:0006959"}


id: MONDO:0005669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A superficial mycosis that is caused by Piedraia hortae and is manifested by a small firm black nodule involving the hair shaft.","direct_ancestors":[{"relation_name":"is_a","term_name":"piedra","termid":"MONDO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"black piedra","secondary_identifiers":["MEDGEN:452132","icd11.foundation:1990974193","SCTID:33666009","ICD10CM:B36.3","UMLS:C0153249","DOID:12711","ICD9:111.3"],"termid":"MONDO:0005669","xrefs":{"Monarch":{"xref_id":"0005669"}}}


id: GO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor activating ligand activity (obsolete GO:0005155)","synonyms":[{"name":"EGF receptor activating ligand activity","type":"exact"},{"name":"EGFR activating ligand activity","type":"exact"},{"name":"epidermal growth factor receptor activating ligand activity","type":"exact"}],"termid":"GO:0005155"}


id: PATO:0000885
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000885 male fertility value (obsolete PATO:0000885)","termid":"PATO:0000885"}


id: GO:1990869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.","definition_xrefs":["PMID:11113082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to chemokine","termid":"GO:1990868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chemokine","termid":"GO:1990869"}


id: MONDO:0033281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polycystic kidney disease in which the cause of the disease is a mutation in the DZIP1L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"},{"relation_name":"is_a","term_name":"autosomal recessive polycystic kidney disease","termid":"MONDO:0009889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"polycystic kidney disease 5","secondary_identifiers":["OMIM:617610","UMLS:C4539903","GARD:16242","DOID:0080273","MEDGEN:1624679"],"synonyms":[{"name":"DZIP1L polycystic kidney disease","type":"exact"},{"name":"PKD5","type":"related"},{"name":"polycystic kidney disease 5","type":"exact"},{"name":"polycystic kidney disease caused by mutation in DZIP1L","type":"exact"}],"termid":"MONDO:0033281","xrefs":{"Monarch":{"xref_id":"0033281"}}}


id: PBO:0034039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_component","termid":"PBO:0034039"}


id: PBO:0074559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 12","termid":"PBO:0074559"}


id: GO:0034983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from an acetylated lysine residue in a peptide or protein.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine deacetylation","synonyms":[{"name":"protein lysine acetylation","type":"related"}],"termid":"GO:0034983"}


id: GO:0052757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of hexosaminic linkages in chondroitin, a linear polymer structure composed of the repeating disaccharide unit [->4)-D-glucuronic acid-(1->3)-N-acetyl-D-galactosamine-(1-], also written as [->4GlcUA1->3GalNAc1-].","definition_xrefs":["GOC:mengo_curators","PMID:18390555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endogalactosaminidase activity","termid":"GO:0033931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"chondroitin hydrolase activity","synonyms":[{"name":"chondroitin endo-beta-galactosaminidase activity","type":"exact"}],"termid":"GO:0052757"}


id: GO:0097410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a hippocampal interneuron.","definition_xrefs":["PMID:19655320","CL:1001569","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex neuron differentiation","termid":"GO:0021895"},{"relation_name":"part_of","term_name":"hippocampus development","termid":"GO:0021766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hippocampal interneuron differentiation","termid":"GO:0097410"}


id: GO:0042748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"All sleep stages in the circadian sleep/wake cycle other than REM sleep. These stages are characterized by a slowing of brain waves and other physiological functions.","definition_xrefs":["GOC:jl","PMID:33537937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian sleep/wake cycle process","termid":"GO:0022410"},{"relation_name":"part_of","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}


id: GO:0018894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern.","definition_xrefs":["UM-BBD_pathwayID:dpd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dibenzo-p-dioxin metabolic process","synonyms":[{"name":"dibenzo-p-dioxin metabolism","type":"exact"},{"name":"oxanthrene metabolic process","type":"exact"},{"name":"oxanthrene metabolism","type":"exact"},{"name":"phenodioxin metabolic process","type":"exact"},{"name":"phenodioxin metabolism","type":"exact"}],"termid":"GO:0018894"}


id: PR:000050485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe) that has not been phosphorylated at the positions equivalent to Ser-199 and Ser-207 of the amino acid sequence represented by UniProtKB:O14188. Example: UniProtKB:O14188, Ser-199/Ser-207, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:33131769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","termid":"PR:000050483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rng2/UnPhos(S199,S207)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: Ras GTPase-activating-like protein rng2 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rng2/UnPhos:1","type":"exact"},{"name":"UniProtKB:O14188, Ser-199/Ser-207, PR:000026291","type":"narrow"},{"name":"rng2/UnPhos(S199,S207)","type":"exact"}],"termid":"PR:000050485"}


id: MONDO:1012117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypomyelinogenesis, non-human animal","termid":"MONDO:1011845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, sheep","secondary_identifiers":["OMIA:000527-9940"],"termid":"MONDO:1012117","xrefs":{"Monarch":{"xref_id":"1012117"}}}


id: PBO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacyl-tRNA hydrolase (predicted)","termid":"PBO:0001559"}


id: MONDO:0019926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X small rings is a rare chromosome X structural anomaly, with highly variable phenotype, principally characterized by developmental delay, intellectual disability, short stature, craniofacial dysmorphism (incl. microcephaly, facial asymmetry, hypertelorism, long palpebral fissures, epicanthus, low-set or malrotated ears, broad nose with a flat nasal bridge, anteverted nares, long philtrum, thin upper lip, high arched palate, micrognathia) and skeletal anomalies (e.g. cubitus valgus, talipes equinovarus). Patients may also present heart malformations (e.g. ventricular septal defects, mitral valve stenosis), sacral dimple, soft tissue syndactyly, pigmented nevi, and seizures.","definition_xrefs":["Orphanet:96201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"X small rings","secondary_identifiers":["MEDGEN:1641475","UMLS:C4707824","GARD:19345","SCTID:766760004"],"termid":"MONDO:0019926","xrefs":{"Monarch":{"xref_id":"0019926"}}}


id: PBO:0048116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2 pseudogene 4","termid":"PBO:0048116"}


id: GO:0016784
data:
  {"annotated_genes":["SJAG_04113"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75152],"is_not":false,"summary":null,"term":"GO:0016784"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-mercaptopyruvate + cyanide = pyruvate + thiocyanate.","definition_xrefs":["EC:2.8.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04113":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3-mercaptopyruvate sulfurtransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9013471","Reactome:R-HSA-9034756","RHEA:21740","MetaCyc:MERCAPYSTRANS-RXN","Reactome:R-HSA-9013533","Reactome:R-HSA-9012721"],"synonyms":[{"name":"3-mercaptopyruvate sulphurtransferase activity","type":"exact"},{"name":"3-mercaptopyruvate:cyanide sulfurtransferase activity","type":"related"},{"name":"beta-mercaptopyruvate sulfurtransferase activity","type":"related"},{"name":"mercaptopyruvate sulfurtransferase activity","type":"exact"}],"termid":"GO:0016784","terms_by_termid":{"GO:0016784":null}}


id: PBO:0057990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3914-2","termid":"PBO:0057990"}


id: GO:0061971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of another structural tissue into bone.","definition_xrefs":["PMID:29852585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"replacement bone morphogenesis","termid":"GO:0061971"}


id: GO:1903660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of complement-dependent cytotoxicity.","definition_xrefs":["PMID:24280217","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell killing","termid":"GO:0031342"},{"relation_name":"is_a","term_name":"regulation of complement-dependent cytotoxicity","termid":"GO:1903659"},{"relation_name":"negatively_regulates","term_name":"complement-dependent cytotoxicity","termid":"GO:0097278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement-dependent cytotoxicity","synonyms":[{"name":"down regulation of complement-dependent cytotoxicity","type":"exact"},{"name":"down-regulation of complement-dependent cytotoxicity","type":"exact"},{"name":"downregulation of complement-dependent cytotoxicity","type":"exact"},{"name":"inhibition of complement-dependent cytotoxicity","type":"narrow"}],"termid":"GO:1903660"}


id: GO:0034419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-2-hydroxyglutarate + O2 = 2-oxoglutarate + hydrogen peroxide.","definition_xrefs":["PMID:18390652"],"gene_count":0,"genotype_count":0,"name":"obsolete L-2-hydroxyglutarate oxidase activity (obsolete GO:0034419)","termid":"GO:0034419"}


id: GO:0048775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leucophore differentiation","termid":"GO:0048775"}


id: PBO:0076259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVIL antisense RNA 1","termid":"PBO:0076259"}


id: PBO:0004086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human KIN ortholog (predicted)","termid":"PBO:0004086"}


id: PBO:0028373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0028373"}


id: PBO:0090960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-remodelling mannose-ethanolamine phosphate phosphodiesterase","termid":"PBO:0090960"}


id: PBO:0005481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Spf30 (predicted)","termid":"PBO:0005481"}


id: PBO:0066596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q","termid":"PBO:0066596"}


id: GO:0070366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte differentiation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"hepatocyte differentiation","termid":"GO:0070365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte differentiation","synonyms":[{"name":"regulation of liver cell differentiation","type":"exact"}],"termid":"GO:0070366"}


id: FYPO:0002121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sodium:hydrogen antiporter activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0002114"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0002114","FYPO:0000652","FYPO:0000707","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sodium:hydrogen antiporter activity","termid":"FYPO:0002121"}


id: PBO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant showed a repair profile very similar to that to the rhp51deltasingle mutant","termid":"PBO:0001684"}


id: MONDO:0006042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection of the membranes covering the brain and the spinal cord caused by Mycobacterium tuberculosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculous salpingitis","termid":"MONDO:0000271"},{"relation_name":"is_a","term_name":"central nervous system tuberculosis","termid":"MONDO:0005696"},{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningeal tuberculosis","secondary_identifiers":["MEDGEN:21725","MESH:D014390","UMLS:C0041318","NORD:1437","NCIT:C84888","EFO:1000039","SCTID:58437007","GARD:7828","Orphanet:499004"],"synonyms":[{"name":"Meningitis, Tuberculous","type":"exact"},{"name":"TB meningitis","type":"exact"},{"name":"TBM","type":"exact"},{"name":"tubercular meningitis","type":"exact"},{"name":"tuberculous meningitis","type":"exact"}],"termid":"MONDO:0006042","xrefs":{"Monarch":{"xref_id":"0006042"}}}


id: GO:0005610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3, beta3 and gamma2 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-5 complex","synonyms":[{"name":"laminin-332 complex","type":"narrow"},{"name":"laminin-3A32 complex","type":"exact"},{"name":"laminin-5A complex","type":"exact"}],"termid":"GO:0005610"}


id: PBO:0074160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC35F3 antisense RNA 1","termid":"PBO:0074160"}


id: GO:1903360
data:
  {"annotated_genes":["SJAG_04947","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99849,104288],"is_not":false,"summary":null,"term":"GO:1903360"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a lateral cortical node.","definition_xrefs":["PMID:25009287","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to lateral cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in lateral cortical node","type":"exact"},{"name":"protein localisation to lateral cortical node","type":"exact"},{"name":"protein localization in lateral cortical node","type":"exact"}],"termid":"GO:1903360","terms_by_termid":{"GO:1903360":null}}


id: PBO:0076506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 6 pseudogene","termid":"PBO:0076506"}


id: PBO:0034165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_disappearance_of","termid":"PBO:0034165"}


id: GO:0005788
data:
  {"annotated_genes":["SJAG_00530","SJAG_04571","SJAG_00288","SJAG_03535","SJAG_00403","SJAG_01180","SJAG_00790","SJAG_02875","SJAG_02413","SJAG_04046"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78819,88372,92073,92099,102676,110736,113398,113505,118255],"is_not":false,"summary":null,"term":"GO:0005788"},{"annotations":[92855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099021"},{"annotations":[92861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099020"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the endoplasmic reticulum.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00288":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00790":null,"SJAG_01180":null,"SJAG_02413":null,"SJAG_02875":null,"SJAG_03535":null,"SJAG_04046":null,"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"endoplasmic reticulum lumen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016022"],"synonyms":[{"name":"ER cisterna","type":"exact"},{"name":"ER lumen","type":"exact"},{"name":"cisternal lumen","type":"exact"},{"name":"endoplasmic reticulum cisterna","type":"exact"}],"termid":"GO:0005788","terms_by_termid":{"GO:0005788":null,"GO:0099020":null,"GO:0099021":null}}


id: PBO:0045894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 6","termid":"PBO:0045894"}


id: PBO:0041255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 198","termid":"PBO:0041255"}


id: PBO:0116908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, UPF0643 family","termid":"PBO:0116908"}


id: GO:1904527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microtubule binding.","definition_xrefs":["GO_REF:0000059","PMID:24520051","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of microtubule binding","termid":"GO:1904526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microtubule binding","synonyms":[{"name":"down regulation of microtubule binding","type":"exact"},{"name":"down regulation of microtubule severing activity","type":"related"},{"name":"down regulation of microtubule/chromatin interaction","type":"related"},{"name":"down-regulation of microtubule binding","type":"exact"},{"name":"down-regulation of microtubule severing activity","type":"related"},{"name":"down-regulation of microtubule/chromatin interaction","type":"related"},{"name":"downregulation of microtubule binding","type":"exact"},{"name":"downregulation of microtubule severing activity","type":"related"},{"name":"downregulation of microtubule/chromatin interaction","type":"related"},{"name":"inhibition of microtubule binding","type":"narrow"},{"name":"inhibition of microtubule severing activity","type":"related"},{"name":"inhibition of microtubule/chromatin interaction","type":"related"},{"name":"negative regulation of microtubule severing activity","type":"related"},{"name":"negative regulation of microtubule/chromatin interaction","type":"related"}],"termid":"GO:1904527"}


id: PBO:0060827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN2 pseudogene 1","termid":"PBO:0060827"}


id: MONDO:0006706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with BACTERIA of the order Bifidobacteriales. This includes infections in the genera BIFIDOBACTERIUM and GARDNERELLA, in the family Bifidobacteriaceae.","definition_xrefs":["MESH:D039941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifidobacteriales infectious disease","secondary_identifiers":["MEDGEN:209748","UMLS:C1136339"],"synonyms":[{"name":"Bifidobacteriales caused disease or disorder","type":"exact"},{"name":"Bifidobacteriales disease or disorder","type":"exact"},{"name":"Bifidobacteriales infection","type":"related"},{"name":"infection, Bifidobacteriales","type":"related"},{"name":"infections, Bifidobacteriales","type":"related"}],"termid":"MONDO:0006706","xrefs":{"Monarch":{"xref_id":"0006706"}}}


id: PBO:0055230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2656","termid":"PBO:0055230"}


id: PATO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's consisting cells.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellularity","termid":"PATO:0001992"}


id: MONDO:0018807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"idiopathic ductopenia","secondary_identifiers":["UMLS:C5702661","GARD:21975","Orphanet:480512","MEDGEN:1814697"],"synonyms":[{"name":"IAD","type":"exact"},{"name":"idiopathic adult ductopenia","type":"exact"}],"termid":"MONDO:0018807","xrefs":{"Monarch":{"xref_id":"0018807"}}}


id: GO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of veins of the heart are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"},{"relation_name":"is_a","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vein morphogenesis","termid":"GO:0003169"}


id: MONDO:0021568
data:
  {"annotated_genes":["SJAG_01370","SJAG_03375","SJAG_01183","SJAG_00516","SJAG_03371","SJAG_04260","SJAG_01896","SJAG_02977","SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[86814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"},{"annotations":[86682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"},{"annotations":[85366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"},{"annotations":[86440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013163"},{"annotations":[86994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010645"},{"annotations":[84784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"},{"annotations":[85204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044726"},{"annotations":[85910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"},{"annotations":[86591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","definition":"A disease that involves the renal tubule.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null,"SJAG_01370":null,"SJAG_01896":null,"SJAG_02977":null,"SJAG_03371":null,"SJAG_03375":null,"SJAG_04260":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tubule disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:57484","EFO:0009566","SCTID:95568003","ICD9:588.89","UMLS:C0151747"],"synonyms":[{"name":"disease of renal tubule","type":"exact"},{"name":"disease or disorder of renal tubule","type":"exact"},{"name":"disorder of renal tubule","type":"exact"},{"name":"renal tubular disease","type":"exact"},{"name":"renal tubular disorder","type":"exact"},{"name":"renal tubule disease","type":"exact"},{"name":"renal tubule disease or disorder","type":"exact"}],"termid":"MONDO:0021568","terms_by_termid":{"MONDO:0010359":null,"MONDO:0010645":null,"MONDO:0011268":null,"MONDO:0011301":null,"MONDO:0011422":null,"MONDO:0013163":null,"MONDO:0013458":null,"MONDO:0044726":null,"MONDO:0054565":null,"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0021568"}}}


id: MONDO:0968989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of limited dorsal myeloschisis (LDM), characterized by a non saccular cutaneous stigmata (midline skin abnormality classically dimple, pit or sometimes angioma), the stalk is attached to this cutaneous stigmata. Fibroneural stalk varies in thickness and complexity.","definition_xrefs":["Orphanet:645343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limited dorsal myeloschisis","termid":"MONDO:0958345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"non-saccular limited dorsal myeloschisis","secondary_identifiers":["UMLS:C5816717","MEDGEN:1853129"],"termid":"MONDO:0968989","xrefs":{"Monarch":{"xref_id":"0968989"}}}


id: GO:0061610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways in which glycerol, 1,2,3-propanetriol, is converted to glycerone phosphate.","definition_xrefs":["ISBN:0201090910","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol metabolic process","termid":"GO:0006071"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycerol to glycerone phosphate metabolic process","synonyms":[{"name":"glycerol metabolism to DHAP","type":"exact"},{"name":"glycerol metabolism to dihydroxyacetone phosphate","type":"exact"},{"name":"glycerol metabolism to glycerone phosphate","type":"exact"},{"name":"glycerol to DHAP metabolic process","type":"exact"},{"name":"glycerol to dihydroxyacetone phosphate metabolic process","type":"exact"}],"termid":"GO:0061610"}


id: PBO:0059534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription terminator","termid":"PBO:0059534"}


id: PBO:0061334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B12","termid":"PBO:0061334"}


id: PBO:0058133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4433b","termid":"PBO:0058133"}


id: GO:0009827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to chemical and structural alterations of an existing cellulose and pectin-containing cell wall that can result in loosening, increased extensibility or disassembly. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall organization","termid":"GO:0009664"},{"relation_name":"is_a","term_name":"cell wall modification","termid":"GO:0042545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"plant-type cell wall modification","synonyms":[{"name":"cellulose and pectin-containing cell wall modification","type":"exact"}],"termid":"GO:0009827"}


id: PBO:0043257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 15","termid":"PBO:0043257"}


id: PBO:0005238
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of staurosporine","termid":"PBO:0005238"}


id: PBO:0077287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 30B","termid":"PBO:0077287"}


id: RO:HOM0000060
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Between-species paralogy that involves single copy paralogs resulting from reciprocal gene loss.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_1_homology_relationship_with","termid":"RO:HOM0000019"},{"relation_name":"is_a","term_name":"in_between-species_paralogy_relationship_with","termid":"RO:HOM0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_apparent_orthology_relationship_with","synonyms":[{"name":"1:1 paralogy","type":"exact"},{"name":"apparent 1:1 orthology","type":"exact"},{"name":"apparent orthologous to","type":"exact"},{"name":"pseudoorthology","type":"exact"}],"termid":"RO:HOM0000060"}


id: PBO:0063873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C pseudogene 2","termid":"PBO:0063873"}


id: PBO:0086676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RDN5-4; YLR157C-C has a paralog, YLR154C-H, that arose from a segmental duplication","termid":"PBO:0086676"}


id: GO:0102220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 dihydrogen + NAD + 2 an oxidized ferredoxin = NADH + 3 H+ + 2 a reduced ferredoxin.","definition_xrefs":["GOC:pz","RHEA:30279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrogenase activity (NAD+, ferredoxin)","secondary_identifiers":["MetaCyc:RXN-12215","EC:1.12.1.4"],"termid":"GO:0102220"}


id: MONDO:0002401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon malignant tumor arising from the tendon sheath. Morphologically, it is characterized by the presence of a cellular infiltrate reminiscent of a giant cell tumor with prominent malignant characteristics. Recurrent giant cell tumors with a sarcomatous dedifferentiation are included in this category as well.","definition_xrefs":["NCIT:C6535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant giant cell tumor","termid":"MONDO:0002402"},{"relation_name":"is_a","term_name":"synovium cancer","termid":"MONDO:0002403"},{"relation_name":"is_a","term_name":"tenosynovial giant cell tumor","termid":"MONDO:0002522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant tenosynovial giant cell tumor","secondary_identifiers":["MEDGEN:226849","UMLS:C1266168","DOID:2704","ICDO:9252/3"],"synonyms":[{"name":"giant cell tumor of tendon sheath, malignant","type":"exact"},{"name":"giant cell tumour of tendon sheath, malignant","type":"exact"},{"name":"malignant giant cell neoplasm of tendon sheath","type":"exact"},{"name":"malignant giant cell neoplasm of the tendon sheath","type":"exact"},{"name":"malignant giant cell tumor of tendon sheath","type":"exact"},{"name":"malignant giant cell tumor of the tendon sheath","type":"exact"},{"name":"malignant giant cell tumour of tendon sheath","type":"exact"},{"name":"malignant giant cell tumour of the tendon sheath","type":"exact"},{"name":"malignant tendon sheath giant cell neoplasm","type":"exact"},{"name":"malignant tendon sheath giant cell tumor","type":"exact"},{"name":"malignant tendon sheath giant cell tumour","type":"exact"},{"name":"malignant tenosynovial giant cell tumor","type":"exact"},{"name":"tenosynovial giant cell tumor, malignant","type":"exact"}],"termid":"MONDO:0002401","xrefs":{"Monarch":{"xref_id":"0002401"}}}


id: PBO:0061079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK1 homeobox 1","termid":"PBO:0061079"}


id: GO:1904112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of plus-end directed microfilament motor activity.","definition_xrefs":["GOC:kmv","GO_REF:0000059","GOC:TermGenie","PMID:25717181"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of plus-end directed microfilament motor activity (obsolete GO:1904112)","synonyms":[{"name":"activation of barbed-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed actin filament motor activity","type":"related"},{"name":"activation of plus-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed microfilament motor activity","type":"narrow"},{"name":"positive regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"positive regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"positive regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"up-regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up-regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"upregulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed actin filament motor activity","type":"related"},{"name":"upregulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed microfilament motor activity","type":"exact"}],"termid":"GO:1904112"}


id: PBO:0078401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 11-1","termid":"PBO:0078401"}


id: FYPO:0006510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is abnormal at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology","termid":"FYPO:0006508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000293"],"is_obsolete":false,"name":"abnormal telomere structure","synonyms":[{"name":"abnormal chromosome structure at telomere during vegetative growth","type":"exact"},{"name":"abnormal telomere structure during mitotic cell cycle","type":"related"},{"name":"abnormal telomeric region structure during vegetative growth","type":"exact"}],"termid":"FYPO:0006510"}


id: PBO:0069366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 626, pseudogene","termid":"PBO:0069366"}


id: PBO:0088322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate reductase Osm1","termid":"PBO:0088322"}


id: PBO:0061129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMBR antisense RNA 1","termid":"PBO:0061129"}


id: MONDO:0018433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute myeloid leukemia with t(6;9)(p23;q34) is a rare subtype of acute myeloid leukemia with recurrent genetic abnormalities characterized by clonal proliferation of poorly differentiated myeloid blasts in the bone marrow, blood, or other tissues in patients who present the t(6;9)(p23;q34) translocation. Frequently associated with multilineage bone marrow dysplasia, it usually presents with anemia, thrombocytopenia (often pancytopenia), and other nonspecific symptoms related to ineffective hematopoesis (fatigue, bleeding and bruising, recurrent infections, bone pain) and/or extramedullary site involvement (gingivitis, splenomegaly). Basophilia, as well as poor response to chemotherapy, has been reported.","definition_xrefs":["Orphanet:402014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia with t(6;9)(p23;q34)","secondary_identifiers":["MEDGEN:1376401","GARD:21710","UMLS:C4518837"],"synonyms":[{"name":"AML with t(6;9)(p23;q34)","type":"exact"}],"termid":"MONDO:0018433","xrefs":{"Monarch":{"xref_id":"0018433"}}}


id: FYPO:0002667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"},{"relation_name":"is_a","term_name":"decreased peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased peptide-serine-N-acetyltransferase activity","synonyms":[{"name":"reduced peptide-serine-N-acetyltransferase activity","type":"exact"}],"termid":"FYPO:0002667"}


id: MONDO:0004293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the larynx that arises from the supraglottic area. Signs and symptoms include dysphagia, a sensation of foreign body in the throat, and hemoptysis. It spreads to the space anterior to the epiglottis, pyriform sinus, and base of the tongue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma of supraglottis","termid":"MONDO:0004357"},{"relation_name":"is_a","term_name":"laryngeal squamous cell carcinoma","termid":"MONDO:0005595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supraglottis squamous cell carcinoma","secondary_identifiers":["MEDGEN:152890","UMLS:C0749163","DOID:7587","NCIT:C4945"],"synonyms":[{"name":"epidermoid carcinoma of supraglottis","type":"exact"},{"name":"epidermoid carcinoma of the supraglottis","type":"exact"},{"name":"squamous cell carcinoma of supraglottis","type":"exact"},{"name":"squamous cell carcinoma of the supraglottis","type":"exact"},{"name":"supraglottic epidermoid carcinoma","type":"exact"},{"name":"supraglottic part of larynx squamous cell carcinoma","type":"exact"},{"name":"supraglottic squamous cell carcinoma","type":"exact"},{"name":"supraglottis epidermoid carcinoma","type":"exact"},{"name":"supraglottis squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004293","xrefs":{"Monarch":{"xref_id":"0004293"}}}


id: GO:1990411
data:
  {"annotated_genes":["SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111286],"is_not":false,"summary":null,"term":"GO:1990411"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hercynylcysteine sulfoxide + 2H+ = ergothioneine + pyruvate + ammonium.","definition_xrefs":["PMID:24828577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide lyase activity (ergothioneine-forming)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14428","RHEA:42688"],"termid":"GO:1990411","terms_by_termid":{"GO:1990411":null}}


id: GO:0060721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of spongiotrophoblast cell proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in embryonic placenta development","termid":"GO:0060723"},{"relation_name":"regulates","term_name":"spongiotrophoblast cell proliferation","termid":"GO:0060720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spongiotrophoblast cell proliferation","termid":"GO:0060721"}


id: GO:0100025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular amino acid biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular amino acid biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100025)","termid":"GO:0100025"}


id: GO:0051591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cAMP","synonyms":[{"name":"response to 3',5' cAMP","type":"exact"},{"name":"response to 3',5'-cAMP","type":"exact"},{"name":"response to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"response to cyclic AMP","type":"exact"}],"termid":"GO:0051591"}


id: MONDO:0018267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"combined cervical dystonia","secondary_identifiers":["Orphanet:370114"],"termid":"MONDO:0018267","xrefs":{"Monarch":{"xref_id":"0018267"}}}


id: PBO:0029277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitin_ligase_activity_during_mitotic_metaphase","termid":"PBO:0029277"}


id: PBO:0113298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein implicated in transcription termination by RNA polymerase II; binds to the RNA polymerase II C-terminal domain (CTD) phosphorylated on serine (ser2); interacts with 5' to 3' exonuclease Rat1p and decapping endonuclease Rai1p and is involved in mRNA 3' end processing; contains an RPR domain (CTD-interacting domain); involved in regulation of Ty1 transposition","termid":"PBO:0113298"}


id: PBO:0063425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4D","termid":"PBO:0063425"}


id: GO:0071946
data:
  {"annotated_genes":["SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102027],"is_not":false,"summary":null,"term":"GO:0071946"}]},"cv_name":"biological_process","definition":"A DNA replication termination process that is initiated by protein binding to a binding site on the same chromosome, but remote from the termination site, via DNA looping or chromosome kissing.","definition_xrefs":["PMID:20850009","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific DNA replication termination","termid":"GO:0071170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"cis-acting DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cis acting DNA replication termination","type":"exact"}],"termid":"GO:0071946","terms_by_termid":{"GO:0071946":null}}


id: MONDO:0971033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland carcinoma composed of groups of carcinoma cells with thymic epithelial differentiation.","definition_xrefs":["DOID:0081457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intrathyroid thymic carcinoma","secondary_identifiers":["MEDGEN:316474","UMLS:C1704613"],"termid":"MONDO:0971033","xrefs":{"Monarch":{"xref_id":"0971033"}}}


id: MONDO:0015268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Medullary sponge kidney (MSK) is a birth defect of the tubules - tiny tubes inside the kidneys. In a normal kidney, urine flows through these tubules as it is being formed. In MSK, tiny sacs called cysts form in the medulla (the inner part of the kidney), creating a sponge-like appearance. The cysts keep urine from flowing freely through the tubules. MSK is present at birth but symptoms typically do not occur until adolescence or adulthood. Problems caused by MSK include blood in the urine, kidney stones, and urinary tract infections. MSK rarely leads to more serious problems, such as total kidney failure. There is no cure for this condition, so treatment is aimed at removing kidney stones and treating urinary tract infections with antibiotics.","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic kidney disease","termid":"MONDO:0002473"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"medullary sponge kidney","secondary_identifiers":["GARD:232","icd11.foundation:1723148250","MESH:D007691","Orphanet:1309","MedDRA:10027104","MEDGEN:5970","NANDO:2200173","ICD9:753.17","NCIT:C34751","SCTID:236443009","UMLS:C0022681","NORD:1421"],"synonyms":[{"name":"Cacchi Ricci disease","type":"related"},{"name":"Cacchi-Ricci disease","type":"exact"},{"name":"Cacchi-Ricci syndrome","type":"related"},{"name":"MSK","type":"exact"},{"name":"Precalicial canalicular ectasia","type":"exact"},{"name":"Precalyceal canalicular ectasia","type":"related"},{"name":"cystic dilatation of renal collecting tubes","type":"related"},{"name":"sponge kidney","type":"related"}],"termid":"MONDO:0015268","xrefs":{"Monarch":{"xref_id":"0015268"}}}


id: GO:0052482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of cell wall modification, in which the cell wall is reinforced and made thicker, that occurs as part of the defense response of an organism.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cell wall thickening","termid":"GO:0052386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"defense response by cell wall thickening","synonyms":[{"name":"cell wall thickening during defense response","type":"related"}],"termid":"GO:0052482"}


id: MONDO:0054588
data:
  {"annotated_genes":["SJAG_02536","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85285,85286],"is_not":false,"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome-like disorder with loose anagen hair","termid":"MONDO:0011899"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome-like disorder with loose anagen hair 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080693","MEDGEN:1376945","NCIT:C176940","OMIM:617506","UMLS:C4479577"],"synonyms":[{"name":"NSLH2","type":"related"},{"name":"Noonan syndrome-like disorder with loose anagen hair 2","type":"exact"}],"termid":"MONDO:0054588","terms_by_termid":{"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0054588"}}}


id: PBO:0080595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 25","termid":"PBO:0080595"}


id: GO:0140722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mycophenolic acid (MPA). MPA is the first isolated antibiotic natural product in the world obtained from a culture of Penicillium brevicompactum in 1893.","definition_xrefs":["PMID:31209052","PMID:21398490","PMID:26751579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"mycophenolic acid biosynthetic process","synonyms":[{"name":"MPA anabolism","type":"broad"},{"name":"MPA biosynthesis","type":"broad"},{"name":"MPA formation","type":"broad"},{"name":"MPA synthesis","type":"broad"},{"name":"mycophenolic acid anabolism","type":"exact"},{"name":"mycophenolic acid biosynthesis","type":"exact"},{"name":"mycophenolic acid formation","type":"exact"},{"name":"mycophenolic acid synthesis","type":"exact"}],"termid":"GO:0140722"}


id: PBO:0067808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 110","termid":"PBO:0067808"}


id: PBO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin dependent monooxygenase (predicted)","termid":"PBO:0003815"}


id: SO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases bound to a repeating unit made of a 2-deoxy-D-ribose ring connected to a phosphate backbone.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA","termid":"SO:0000352"}


id: MONDO:0100004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinically defined disease states with a largely unknown morphological background. Acute mast cell activation (MCA) is commonly seen in allergic reactions and often leads to the clinical signs and symptoms of anaphylaxis. Severe or even life‐threatening MCA may occur when the burden of mast cells is high and/or these cells are in an hyperactivated state. Mastocytosis may be associated with mast cell activation syndrome (MCAS).","definition_xrefs":["MedDRA:10075217","PMID:22555026","PMID:23409940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"mast cell activation syndrome","secondary_identifiers":["MESH:D000090267","GARD:12981","UMLS:C5200989","MEDGEN:1698540"],"synonyms":[{"name":"MACS","type":"exact"},{"name":"disorder of mast cell activation","type":"exact"},{"name":"mast cell activation disease","type":"exact"}],"termid":"MONDO:0100004","xrefs":{"Monarch":{"xref_id":"0100004"}}}


id: PBO:0063318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase 2, mitochondrial","termid":"PBO:0063318"}


id: MONDO:0600011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild hypophosphatasia is the most common form of hypophosphatasia characterized by low alkaline phosphatase, unspecific clinical signs, and typically presents in individuals in adulthood.","definition_xrefs":["PMID:32973344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypophosphatasia","termid":"MONDO:0018570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005066"],"is_obsolete":false,"name":"mild hypophosphatasia","synonyms":[{"name":"attenuated hypophosphatasia","type":"exact"}],"termid":"MONDO:0600011","xrefs":{"Monarch":{"xref_id":"0600011"}}}


id: MONDO:0007567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Epstein-Barr virus insertion site 1 (obsolete MONDO:0007567)","secondary_identifiers":["OMIM:132850"],"synonyms":[{"name":"EBVS1","type":"related"},{"name":"Epstein-Barr VIRUS insertion site 1","type":"related"},{"name":"Epstein-Barr Virus insertion site type 1","type":"exact"},{"name":"Epstein-Barr Virus integration site","type":"related"},{"name":"Epstein-Barr virus insertion site 1","type":"exact"}],"termid":"MONDO:0007567","xrefs":{"Monarch":{"xref_id":"0007567"}}}


id: PBO:0040287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit beta 2","termid":"PBO:0040287"}


id: FYPO:0005782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer mitotic checkpoint complexes than normal.","definition_xrefs":["GO:0033597","PMID:26882497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic checkpoint complex level","synonyms":[{"name":"decreased MCC level","type":"related"},{"name":"decreased mitotic checkpoint complex level during mitotic cell cycle","type":"related"},{"name":"decreased mitotic checkpoint complex level during vegetative growth","type":"exact"},{"name":"mitotic checkpoint complexes present at decreased level","type":"exact"},{"name":"reduced mitotic checkpoint complex level","type":"exact"}],"termid":"FYPO:0005782"}


id: GO:0070748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-35 receptor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-35 receptor binding","synonyms":[{"name":"IL-35","type":"narrow"},{"name":"interleukin-35 receptor ligand","type":"narrow"}],"termid":"GO:0070748"}


id: PR:P15567
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P15567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.13","synonyms":[{"name":"AIR carboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AIRC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade6","type":"exact"}],"termid":"PR:P15567"}


id: PBO:0071101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 103","termid":"PBO:0071101"}


id: PBO:0071845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 40","termid":"PBO:0071845"}


